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. 2021 Jan 6;2021(1):5. doi: 10.1186/s13662-020-03182-y

A fractional complex network model for novel corona virus in China

H A A El-Saka 1,, I Obaya 2, H N Agiza 3
PMCID: PMC7785402  PMID: 33424956

Abstract

As is well known the novel coronavirus (COVID-19) is a zoonotic virus and our model is concerned with the effect of the zoonotic source of the coronavirus during the outbreak in China. We present a SEIS complex network epidemic model for the novel coronavirus. Our model is presented in fractional form and with varying population. The steady states and the basic reproductive number are calculated. We also present some numerical examples and the sensitivity analysis of the basic reproductive number for the parameters.

Keywords: Complex networks, Novel coronavirus (COVID-19), Stability analysis, Basic reproductive number and fractional calculus

Introduction

The corona virus family continues to clone new strains that threaten human life. The world is witnessing these days the emergence of a new strain of corona virus in the Chinese city of Wuhan. This novel corona virus strain (COVID-19) is the seventh of the corona family, which includes, for example, influenza, SARS, and Middle East respiratory syndrome (MERS). The family of coronaviruses is characterized by being common among different types of animal species, such as bats, cats, camels, and cattle.

In December 31, 2019, the Chinese city of Wuhan announced the outbreak of a new strain of coronavirus. And this new strain is considered among the zoonotic viruses that are transmitted from animal to human and then transmitted from human to human [16].

On February 27, 2020 (at the time of writing), there were 82,294 infected cases of this virus worldwide, according to the World Health Organization’s report No. 38 on the epidemiological situation of the virus, including 2747 deaths in China and 57 death cases outside China [7]. This is equivalent to 3.41% mortality worldwide.

The Chinese city of Wuhan in Hubei Province is the origin of this virus, which quickly spread to many Chinese cities (34 cities so far). Then it moved out of the Chinese territory until it reached 46 countries worldwide [7]. Nowadays, we find that China is close to eradicating the COVID-19 epidemic.

The Chinese city of Wuhan is among the most important cities in China in terms of combining many transportation lines between Chinese cities as well as internal transportation outside China. Wuhan also contains a large market for seafood and animals, which is the source of the emergence and spread of COVID-19.

And when looking at how COVID-19 spreads from person to person, we find that the pattern of spread is not known yet, but most of the current information about the method of spread is based on previous information on corona viruses. Also, the spread of COVID-19 from a person infected with the virus to a healthy person needs close communication with the infected person where there will be an effect of cough and sneezing droplets. It turned out from the current cases of infection, whether simple or severe, that symptoms of this disease (COVID-19) appear in the form of fever, shortness of breath and cough. To date, there is no vaccine for this virus, so general prevention instructions such as avoiding direct contact with infected people and using gloves and face masks should be adhered to.

The study focused in this model on the zoonotic nature of the virus because of its continuous effect on the spread of the virus, especially at the beginning of the spread. In addition, the model was placed in a fractional form, with the community being represented by a heterogeneous network, in order for the model to be more realistic.

In the following section we present a heterogeneous network epidemic model for COVID-19 in a fractional form [810] using the Caputo definition. The SEIS scenario was chosen as the mode of diffusion, as it was considered more suitable than the SEIR because some cases have been confirmed to be re-infected with COVID-19 [1113]. For more information about the basics of fractional calculus and fractional model stability, see [1420] and [2124], for networks see [25]. In Sect. 2 we described the model. In Sect. 3 we find the steady states and the basic reproductive function. In Sect. 4 we proved the local stability of the steady states. In Sect. 5 we present the sensitivity analysis to get the most effective parameter and some numerical examples. Section 6 is the conclusion.

Fractional SEIS model description

In this model we divided the population into three compartments susceptible, exposed and infected. The susceptible individuals can be exposed because of being in close contact with infected one. Also, the infection could be transmitted to a susceptible individual from a zoonotic source of COVID-19 (an unknown animal embracing the virus). This interaction between susceptible and the zoonotic source happened in a homogeneous pattern during buying and walking in the seafood market. Also, the number of zoonotic sources is considered to be constant in the seafood market (sellers put other animals after the animals that were sold). The exposed individual become infected after the incubation period. The infected individual became susceptible again after the infectious period. The city’s population (Wuhan city) is changing as a result of traveling continuously to and from the city. In this model we ignored the births and the deaths.

Figure 1.

Figure 1

The dynamical interacting of system (2.1)

According to the above system dynamic description, the model is defined as

Dtα0CSk(t)=Akβ1Sk(t)Θ(t)Nk(t)β2Sk(t)(Z(t)Z(tΔt))Nk(t)+γIk(t)BSk(t),Dtα0CEk(t)=kβ1Sk(t)Θ(t)Nk(t)+β2Sk(t)(Z(t)Z(tΔt))Nk(t)μEk(t)BEk(t),Dtα0CIk(t)=μEk(t)γIk(t)BIk(t), 2.1

where k is the degree of the node, 1kn, n is the maximum degree of a node. Θ(t) is the probability to be linked with an infected node and defined as

Θ(t)=kkP(k)Ik(t)k,

where k=kkP(k).

P(k) is the degree distribution of the population. Nk(t) is the total population of degree k. (Z(t)Z(tΔt)) is a Heaviside function representing the zoonotic infection force. This function affects only before seafood market closure (from 1 December 2019 to 31 December 2019). After the seafood market closure on 1 January 2020 this function is equal to 0. Other parameters are described in Table 1. We used the Caputo definition for the fractional order α(0,1], which is defined as follows:

DtαaCf(t)=1Γ(1α)at(ts)αf(s)ds.

Table 1.

Parameters description

Parameter Description
β1 The infectious rate from infected individual.
β2 The infectious rate from the zoonotic source.
μ Rate of becoming infected.
γ Recovery rate and be susceptible again.
A The average number of passengers coming into the city.
B Traveling rate from the city.

Steady states and the basic reproductive number

Let S={(Sk(t),Ek(t),Ik(t))R+3k,k=1,2,,n|Nk(t)=Sk(t)+Ek(t)+Ik(t)AB} be a closed positive invariant set for system (2.1).

We will find the equilibrium points of system (2.1) by putting its equations equal to zero as follows:

Akβ1Sk(t)Θ(t)Nk(t)β2Sk(t)z(t)Nk(t)+γIk(t)BSk(t)=0,kβ1Sk(t)Θ(t)Nk(t)+β2Sk(t)z(t)Nk(t)μEk(t)BEk(t)=0,μEk(t)γIk(t)BIk(t)=0,

where Z(t)Z(tΔt)=z(t). It is obvious that system (2.1) has a unique free disease equilibrium point,

P0={AB,0,0}1kn,

with respect to z(t)=0 and an endemic point P2={Sk,Ek,Ik}1kn, where

Sk=A2(μ+B)(γ+B)B[(kβ1Θ+β2z(t))B(B+γ+μ)+A(μ+B)(γ+B)],Ek=(γ+B)A(kβ1Θ+β2z(t))(kβ1Θ+β2z(t))B(B+γ+μ)+A(μ+B)(γ+B),Ik=μA(kβ1Θ+β2z(t))(kβ1Θ+β2z(t))B(B+γ+μ)+A(μ+B)(γ+B).

The value of the endemic point changes with respect to the existence of z(t). If z(t)=0, then the endemic point take the form P1={Sk,Ek,Ik}1kn, where

Sk=A2(μ+B)(γ+B)B[kβ1ΘB(B+γ+μ)+A(μ+B)(γ+B)],Ek=(γ+B)Akβ1Θkβ1ΘB(B+γ+μ)+A(μ+B)(γ+B),Ik=μAkβ1Θkβ1ΘB(B+γ+μ)+A(μ+B)(γ+B).

The existence of the endemic point

By substituting with the value of Ik into the definition of Θ(t) we get the self-consistency equation

Θ=1kkkp(k)μA(kβ1Θ+β2z(t))(kβ1Θ+β2z(t))B(B+γ+μ)+A(μ+B)(γ+B).

We can put it in the following form:

g(Θ)=1kkkp(k)μA(kβ1Θ+β2z(t))(kβ1Θ+β2z(t))B(B+γ+μ)+A(μ+B)(γ+B)Θ=0.

Now, we need to get a solution for g(Θ) in the interval Θ(0,1). By calculating the value of g(Θ) at both 0 and 1 we get

g(1)=1kkkp(k)μA(kβ1+β2z(t))(kβ1+β2z(t))B(B+γ+μ)+A(μ+B)(γ+B)1<0

and

g(0)=1kkkp(k)μAβ2z(t)β2z(t)B(B+γ+μ)+A(μ+B)(γ+B)0.

Therefore, we have two cases.

Case 1: If z(t) exists, then g(0)>0. This leads to the function g(Θ) always having a non-trivial solution in the interval (0,1).

Case 2: If z(t)=0, then g(0)=0. Hence, the function g(Θ) has a non-trivial solution in the interval (0,1) under the condition

dg(Θ)dΘ|Θ=0>0,

it follows

k2kμβ1(μ+B)(γ+B)>1, 3.1

where k2=kk2p(k).

The basic reproductive number

Only the exposed and infected compartments will be used to find the basic reproductive value [26]. The rate of new infected nodes entering the two compartments Ek(t) and Ik(t) is represented by the matrix F given by

F=(F11F12F21F22)2n×2n,

where F11, F12, F21 and F22 are n×n matrices [27]. The following matrix V represents the rate of transferring out of and into the two compartments Ek(t) and Ik(t):

V=(V11V12V21V22)2n×2n,

where V11, V12, V21 and V22 are n×n matrices. The basic reproductive number is given by the dominant eigenvalue of FV1 calculated at the disease-free equilibrium point P0 and z(t)=0 (pure population). The elements of F are given by

F11=F21=F22=(000000000)n×n,F12=β1k(P(1)2P(2)nP(n)2P(1)22P(2)2nP(n)nP(1)2nP(2)nnP(n))n×n,

and the elements of matrix V take the form

V11=(B+μ000B+μ000B+μ)n×n,V12=(000000000)n×n,V21=(μ000μ000μ)n×n,V22=(B+γ000B+γ000B+γ)n×n.

The characteristic equation for the 2n eigenvalues λ of matrix FV1 is

λn(k2kβ1μ(B+μ)(B+γ)λ)n=0,

then the basic reproductive number R0 is defined as

R0=k2kβ1μ(B+μ)(B+γ).

Theorem 3.1

Define the basic reproductive number R0 as follows:

R0=k2kβ1μ(B+μ)(B+γ).
  1. If z(t)=0 and R0<1, then system (2.1) has a unique free disease equilibrium point P0.

  2. If z(t)=0 and R0>1, then system (2.1) has an unique endemic point P1.

  3. If z(t)0, then system (2.1) always has an endemic point P2.

Stability analysis of the steady states

The stability of the free disease equilibrium point P0

Firstly, we establish the Jacobian matrix of system (2.1) at P0 with respect to z(t)=0, which takes the form

J(P0)=(C11C12C13C21C22C23C31C32C33)3n×3n, 4.1

where each sub-matrix Cij, 1i, j3 is an n×n matrix and is given by

C11=(B00B)n×n,C12=C31=(0000)n×n,C13=(β1m11+γβ1m1nβ1mn1β1mnn+γ)n×n,C21=(0000)n×n,C22=(μB00μB)n×n,C23=(β1m11β1m1nβ1mn1β1mnn)n×n,C32=(μ00μ)n×n,C33=(γB00γB)n×n,

where mij=ijp(j)k 1i, jn. All eigenvalues of the Jacobian matrix (4.1) should satisfy the following condition:

|arg(xi)|>απ2. 4.2

After expanding the Jacobian matrix, we get the following characteristic equation:

(B+x)n((γ+B+x)(μ+B+x))n1(μβ1k2k+(γ+B+x)(μ+B+x))=0. 4.3

Obviously, we have n negative eigenvalues equal to −B from the first bracket. From the second bracket we have a second degree equation repeated n1 times in the form

(γ+B+x)(μ+B+x)=0,

which having another two negative Eigenvalues (γ+B) and (μ+B). Each one is repeated n1 times then we have 2n2 negative Eigenvalues from the second bracket. The third bracket in (4.3) is a second degree equation equal to

x2+ρ1x+ρ0=0,

where

ρ1=2B+γ+μ>0,ρ0=((γ+B)(μ+B))(1k2kμβ1(γ+B)(μ+B)),ρ0=((γ+B)(μ+B))(1R0).

Therefore, ρ0>0; if R0<1 then the third bracket has two negative eigenvalues. Hence condition (4.2) is satisfied.

Theorem 4.1

If R0<1 then the free disease steady state P0 is locally asymptotically stable and unstable if R0>1.

The stability of the endemic points

Similarly, forming the Jacobian matrix at the endemic point P2 we get

J(P2)=(N11N12N13N21N22N23N31N32N33)3n×3n, 4.4

where each sub-matrix Nij, 1i, j3 is n×n matrix and given by

N11=((w1+υ1)(1ε1)B00(wn+υn)(1εn)B)n×n,N12=(ε1(w1+υ1)00εn(wn+υn))n×n,N13=(ε1(u11(w1+υ1))+γε1u1nεnun1εn(unn(wn+υn))+γ)n×n,N21=((w1+υ1)(1ε1)00(wn+υn)(1εn))n×n,N22=(ε1(w1+υ1)μB00εn(wn+υn)μB)n×n,N23=(ε1(u11(w1+υ1))ε1u1nεnun1εn(unn(wn+υn)))n×n,N31=(0000)n×n,N32=(μ00μ)n×n,N33=(γB00γB)n×n,

where

wi=β1iΘNi,εi=SiNi,uij=β1ijp(j)k,υi=β2z(t)Ni,1εi>0,1i,jn.

The characteristic equation has the form

(B+x)ni=1n((x+μ+B)(x+γ+B)+(wi+υi)(x+γ+B+μ))×(1i=1nεiμuii((x+μ+B)(x+γ+B)+(wi+υi)(x+γ+B+μ)))=0. 4.5

It is clear that Eq. (4.5) has n negative eigenvalues equal to −B. The next 2n eigenvalues could be obtained from the second part of Eq. (4.5), which is defined as a polynomial function of degree 2n as follows:

Ω(x)=i=1n((x+μ+B)(x+γ+B)+(wi+υi)(x+γ+B+μ))×(1i=1nεiμuii((x+μ+B)(x+γ+B)+(wi+υi)(x+γ+B+μ))).

Now, we will search for the roots of Ω(x) instead of calculating them. In the first case we suppose that

((x+μ+B)(x+γ+B)+(wi+υi)(x+γ+B+μ))=0,

which is an equation of degree two with positive coefficients. That means that we have two negative eigenvalues ξi1, ξi2 depending on wi (wi has an increasing value) and having the values

ξi1=(2B+γ+μ+wi+υi)2D2,ξi2=(2B+γ+μ+wi+υi)2+D2,

where

D=(2B+γ+μ+wi+υi)24((γ+B)(μ+B)+(B+γ+μ)(wi+υi)),ξi1,ξi2>0 and ξi1<ξi2,1in.

Therefore, we have the last 2n negative eigenvalues. In the second case, we suppose

Ω(x)=((x+μ+B)(x+γ+B)+(w1+υ1)(x+γ+B+μ))×((x+μ+B)(x+γ+B)+(w2+υ2)(x+γ+B+μ))((x+μ+B)(x+γ+B)+(wn+υn)(x+γ+B+μ))ε1μu11((x+μ+B)(x+γ+B)+(w2+υ2)(x+γ+B+μ))×((x+μ+B)(x+γ+B)+(w3+υ3)(x+γ+B+μ))((x+μ+B)(x+γ+B)+(wn+υn)(x+γ+B+μ))εnμunn((x+μ+B)(x+γ+B)+(w1+υ1)(x+γ+B+μ))×((x+μ+B)(x+γ+B)+(w2+υ2)(x+γ+B+μ))((x+μ+B)(x+γ+B)+(wn1+υn1)(x+γ+B+μ))=0,

which is a continuous function. We can put the function Ω(x) in a more simple form as follows:

Ω(x)=((x+ξ11)(x+ξ12)(x+ξ21)(x+ξ22)(x+ξn1)(x+ξn2))ε1μu11((x+ξ21)(x+ξ22)(x+ξ31)(x+ξ32)(x+ξn1)(x+ξn2))ε2μu22((x+ξ11)(x+ξ12)(x+ξ31)(x+ξ32)(x+ξn1)(x+ξn2))εnμunn((x+ξ11)(x+ξ12)(x+ξ21)(x+ξ22)(x+ξn11)(x+ξn12)),

we can observe that

Ω(ξi1)Ω(ξi+11)<0,1in,

therefore, we have one root in the interval [ξi1,ξi+11]. In general, we have n1 negative solutions in the interval [ξ11,ξn1]. Similarly, with ξi2 we get n1 negative solutions in [ξ12,ξn2]. Searching for the last two roots, we have Ω(ξ11)<0 and Ω(0)>0 then we get one more negative solution in the interval [ξ11,0]. Similarly, we can see that Ω(ξ12)<0. Then we get another negative solution in the interval [ξ12,0]. Finally, the function Ω(x) has 2n negative solutions in the interval [ξn2,0]. Hence, condition (4.2) is satisfied and the endemic equilibrium point P2 is locally asymptotically stable.

Theorem 4.2

The endemic steady state P2 is always locally asymptotically stable.

Remark 1

When z(t)=0 and R0>1, then the last proof is valid for P1 and it will be locally asymptotically stable.

Sensitivity analysis and numerical simulation

Sensitivity of the parameters

Sensitivity analysis shows us which of the parameters used in our mathematical model is the most effective in spreading the infection [28]. In the definition of R0, it is depending on five variables μ, β1, γ, B and where is the ratio between the second and the first moment of the node degree k as an additional parameter. Using the sensitivity index SrR0 which mean the sensitivity of the basic reproductive number with respect to r (any chosen parameter) with the definition

SrR0=R0rrR0.

For example, SrR0=1 means that any increasing (decreasing) of the value of r by v% increases (decreases) the value of R0 by the same percentage. In the opposite case, SrR0=1 means that any increasing (decreasing) of the value of r by v% decreases (increases) the value of R0 by the same percentage. After applying the sensitivity analysis, we get the following sensitivity indices:

SμR0=BB+μ,Sβ1R0=1,SBR0=B(1B+γ+1B+μ),SγR0=γB+γ,SkR0=1.

Using the values in Table 2, group 2 we get the following values for the sensitivity indices:

SμR0=1.27,Sβ1R0=1,SBR0=2.0260,SγR0=3.4140,SkR0=1.

It is obvious that the parameter γ is the most sensitive parameter i.e. if this parameter increased by 10%, the value of R0 will be decreased by 34.14%. Notice that the values of the sensitivity indices can be changed with respect to the parameters value.

Table 2.

The value of the parameters used in the model and the initial values

Parameter Group 1 Group 2
Value Value
β1 0.2 0.6
β2 0.1 0.1
μ 0.5 0.27
γ 0.8 0.2
A 652,451 652,451
B 0.5553431859205776 0.0553431859205776
N0 11,081,000 11,081,000
S(0) 11,080,139 11,080,139
E(0) 820 820
I(0) 41 41

Numerical simulation

In this section, we used an Adams-type predictor-corrector method [19, 20] for solving system (2.1), showing the results obtained in previous sections. We have a BA random scale free network with p(k)=mkγ1, where m is a constant satisfies kp(k)=1 and 2<γ1<3 is the exponent of the power law distribution. Choosing γ1=2.3 and n=100, we present the following examples.

Example 5.1

In the absence of the zoonotic effect (z(t)=0), choosing the values in group 1, Table 2, for model (2.1) parameters we get R0=0.7953<1. In this case, system (2.1) has a unique disease-free steady state P0 which is locally asymptotically stable according to Theorem 4.1. It is shown for Sk(t), Ek(t) and Ik(t) for different values of k with fractional order α=0.95,0.98 and 1 in Figs. 24.

Figure 3.

Figure 3

α=0.98 and R0=0.7953

Figure 2.

Figure 2

α=0.95 and R0=0.7953

Figure 4.

Figure 4

α=1 and R0=0.7953

Example 5.2

In the absence of the zoonotic effect (z(t)=0), choosing the values in group 2, Table 2, for model (2.1) parameters we get R0=22.1121>1. In this case, system (2.1) has a unique endemic steady state P1 which is locally asymptotically stable according to Remark 1. It is shown for Sk(t), Ek(t) and Ik(t) for different values of k with fractional order α=0.95,0,98 and 1 in Fig. 57.

Figure 6.

Figure 6

α=0.98 and R0=22.1121

Figure 5.

Figure 5

α=0.95 and R0=22.1121

Figure 7.

Figure 7

α=1 and R0=22.1121

Example 5.3

In the case of existence of the zoonotic effect (z(t)=1000 for Δt=100), choosing the values in group 1, Table 2, for model (2.1) parameters we get R0=0.7953<1. In this case, system (2.1) has a unique endemic steady state P2 which is locally asymptotically stable according to Theorem 4.2. It is shown for Sk(t), Ek(t) and Ik(t) for different values of k with fractional order α=0.95 in Fig. 8.

Figure 8.

Figure 8

α=0.95 and R0=0.7953

After the numerical simulation, we can observe the effect of the fractional order α. Decreasing the value of α gives a larger region for stability to our system i.e. for lower values for α the more extended and lower peak we get. It is known that increasing the number of infected individuals in a short period of time can lead to the collapse of the health organization anywhere. Therefore, the small value of the fractional order α helps to prolong the period of time to reach the lower epidemic peak, which in turn helps the health system to treat the largest number of infected individuals and avoid collapse.

The value of the basic reproductive number R0 depends on some parameters (β1, μ, B, γ and k2k). The parameter k2k is very important and representing the heterogeneity of the network. In Fig. 9 we illustrate the importance of k2k by plotting the change of R0 value with respect the value of degree k.

Figure 9.

Figure 9

The change of R0 value with respect the value of degree k, the left curve for group 1 parameters and the right curve for group 2 parameters

In Fig. 10, we compare the real data [29] of China from 22 January to 9 April with the prediction curve of the infected individuals. We get the more suitable case with fractional order α=0.98.

Figure 10.

Figure 10

The real data of China with the prediction curve of infected persons (this curve plotted with k=1, β1=β2=0.2, μ=0.27, B=0.0953431859205776, γ=0.6 and A=561791. The initial values are S(0)=11,080,139, E(0)=50,000 and I(0)=41. We get R0=2.4103

Conclusion and discussion

In this paper we presented a heterogeneous epidemiological network model that illustrates the novel coronavirus (COVID-19) prevalence pattern using a fractional-order system. Taking into account the effect of the zoonotic source origin of the disease, as well as the continuous transport movement in Wuhan, the mainland city of the virus. We calculated the basic reproduction number, which significantly depends on traveling and movement rates from and outside the city. In addition we calculated the equilibrium positions for this system, as well as showing the local stability of the disease-free situation if the value of the R0<1. Likewise, the epidemiological situation is locally asymptotically stable, if the value of R0>1. And the danger of this virus (COVID-19) appears in the speed of its spread among individuals and the danger of its transmission to many countries around the world. There is a great fear of the formation of (COVID-19) for another large infection area outside the mainland and containing another strain of the corona family. We cannot deny the effective influence of the zoonotic source through which the virus was transmitted to humans and which in turn has spread among humans. It is possible that the impact of the zoonotic source continues until now and is not limited to the closure of the seafood market in Wuhan, China, which is considered as a possible explanation for the increasing numbers of infection.

Acknowledgements

Not applicable.

Authors’ contributions

All authors contributed and significantly in writing this paper. All authors have read and approved the final paper.

Funding

This research work is not supported by any funding agencies.

Availability of data and materials

Not applicable.

Competing interests

The authors declare that they have no competing interests.

Contributor Information

H. A. A. El-Saka, Email: halaelsaka@yahoo.com

I. Obaya, Email: i.obaya@yahoo.com

H. N. Agiza, Email: agizah@mans.edu.eg

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