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. 2021 Jan 12;16(1):e0244878. doi: 10.1371/journal.pone.0244878

Choosing important health outcomes for comparative effectiveness research: 6th annual update to a systematic review of core outcome sets for research

Elizabeth Gargon 1, Sarah L Gorst 1,*, Karen Matvienko-Sikar 2, Paula R Williamson 1
Editor: Charles S Wiysonge3
PMCID: PMC7802923  PMID: 33434219

Abstract

Background

An annual update to a systematic review of core outcome sets (COS) for research ensures that the COMET database is up-to-date. The aims of this study were to: (i) identify COS that were published or indexed in 2019 and to describe the methodological approaches used in these studies; (ii) investigate whether children have been included as participants in published COS development studies, and which methods have been used to facilitate their participation; iii) update a previous exercise to identify COS relevant to the most burdensome global diseases and injuries.

Methods

MEDLINE and SCOPUS were searched to identify studies published or indexed between (and inclusive of) January 2019 and December 2019. Automated screening methods were used to rank the citations in order of relevance; the top 25% in ranked priority order were screened for eligibility. COS were assessed against each of the Core Outcome Set-STAndards for Development (COS-STAD). A search of the COMET database was undertaken to identify COS relevant to the 25 leading causes of disease burden.

Results

Thirty-three studies, describing the development of 37 COS, were included in this update. These studies have been added to the COMET database, which now contains 370 published (1981–2019) COS studies for clinical research. Six (18%) of the 33 studies in this update were deemed to have met all of the minimum standards for COS development (range = 4 to 12 criteria, median = 9 criteria). Of the 370 COS studies published to date, 82 COS have been developed for paediatric health conditions and children would have been eligible to participate in 68/82 of these studies. Eleven of these 68 (16%) COS studies have included children as participants within the development process, most commonly through participation in Delphi surveys. Relevant COS were identified for 22/25 leading causes of global disease burden.

Conclusion

There has been a demonstrated increase in COS developed for both research and routine practice, and consistently high inclusion of patient participants. COS developed for paediatric conditions need to further incorporate the perspectives of children, alongside parents and other adults, and adopt research methods fit for this purpose. COS developers should consider the gaps identified in this update as priorities for COS development.

Introduction

A core outcome set (COS) for trials is the minimum set of outcomes that should be measured and reported in all clinical trials in a specific condition [1]. The COMET Initiative has identified studies that have developed COS and collated these studies in an online database (http://www.comet-initiative.org/studies/search). An annual update to a systematic review of studies reporting the development of COS for research substantiates the database, maintaining its relevancy and comprehensiveness. The COMET database also includes details of ongoing work relating to COS development. COS development is still a relatively new area of research, and therefore it is important to describe current knowledge and trends about COS development methods to help inform discussion around what COS developers are currently doing; in both what they are doing consistently, what is becoming standard methods of development, what COS developers are doing well, improvements in methods of COS development, and where there might be gaps in health areas or where methodological research is needed. The publication of the annual update to this review of COS is therefore crucial to informing discussion around good methodological practice in the area of COS development.

In previous updates to this review we have highlighted various areas in need of further consideration, particularly the importance of including patient and public participants in the development of COS [26]. There has been a trend towards a greater number of studies including patient and public participants, increasing to 71% of COS in update five [6] from 56% in update four [5]. However, research on methods to engage more diverse populations, including areas where patients would benefit from enhanced guidance and support, is needed to further facilitate patient participation in COS development [7]. One such group is children, whose perspectives have been overlooked in COS development to date. Prior to this update, only 13% (8/63) of COS studies developed for paediatric conditions (excluding COS focussed on infants) had input from children [8]. Additionally, COS developers have reported difficulties in engaging and retaining children compared with other stakeholder groups [911]. If children are not involved in deciding what outcomes should be included in COS, outcomes important to children are likely to be overlooked.

Minimum standards for COS development methods were established in 2017 [12]. In the previous update to this review, we assessed each of the studies reporting the development of the COS against the COS-STAD criteria and reported that one fifth of the included studies met all of the minimum standards for COS development [6]. We highlighted a particular issue; whereby inadequate descriptions of methods prevented the reader from making an assessment of the a priori status of consensus criteria. Though the time between guideline publication (2017) and the publication of COS included in this current update (2019) is still relatively short, the previous assessment provides a baseline against which a comparison can be made.

The aim of the current study was to update the systematic review of COS to identify COS development studies that were published or indexed in 2019 and to describe the methodological approaches used in these studies. A secondary aim was to explore whether children had been included as participants in COS development studies and to describe the methods used to facilitate their participation. A third aim was to update a previous exercise to identify COS (published or ongoing) that might be relevant to the leading causes of global diseases burden [13].

Methods

Systematic review update

The systematic review methods used in this update have been described extensively in previous reports [26, 14]. An outline is provided here with expansion on new methods being used for this update.

Study selection

The inclusion and exclusion criteria remain unchanged; they were described in full in the original systematic review [14], and updated in the fourth update [5]. Studies were eligible for inclusion if they had applied methodology for determining which outcomes or outcome domains should be measured in clinical trials or health research. Such studies were eligible for inclusion, irrespective of any restrictions by age, health condition or setting [14]. Studies describing the development of a Patient Reported Outcome (PRO) COS (a core set of patient reported symptoms and health related quality of life domains) or Core Event Set (a core set of adverse events or complications) were eligible for inclusion in the review update [5]. Studies describing the update of an existing COS (including studies that have applied methodology for determining how to measure outcomes included in a COS) were included as linked papers to the original COS. Studies that contribute to the development of a COS (e.g. systematic reviews of outcomes, studies eliciting stakeholder group (e.g. patient or clinician) opinion) were included as linked papers to the COS.

The following studies were ineligible for inclusion in the review: studies relating to how, rather than which, outcomes should be measured, except when linked to a COS; studies reporting an overview only with no outcome recommendations; studies relating to outcome recommendations for the assessment of quality or efficiency of care; and studies describing the development of a COS exclusively for clinical practice.

Identification of relevant studies

SCOPUS and MEDLINE via Ovid were searched (March 2020) to identify studies that had been published or indexed between, and inclusive of, January 2019 and December 2019. No language restrictions were applied. The search strategy, developed for the original review [14], was used for the current update (S1 Table). Hand searching included studies that had been submitted to the COMET database/website, reference lists in eligible studies, as well as those in ineligible studies that referred to a COS.

Selecting studies for inclusion in the review

As previously described [14], records from each database were combined and duplicates removed. Automated screening methods were used to rank the citations, in order of relevance, identified in this update [6, 15, 16]. The cut-off for screening was set to the top 25% of abstracts in ranked priority order [15]. Titles and abstracts of the top 25% ranked citations were screened to assess eligibility (stage 1). The ranked list was ordered alphabetically by author surname, prior to any screening, to avoid rank order bias [6]. The full text of potentially relevant articles were then assessed for inclusion (stage 2). Citations without an abstract could not be ranked and therefore were all screened for eligibility.

Three reviewers (EG, SLG, KMS) independently screened the title and abstract of a third of citations each. All reviewers are experienced in this review and have been involved in previous updates. Each citation was categorised as include, unsure, or exclude. Citations were assessed by a second reviewer (EG or SLG) when there was any uncertainty; citations were discussed and categorised accordingly. Full papers were retrieved for all abstracts categorised as include or unsure at this stage.

Two reviewers (EG and SLG) independently assessed half of the full papers each for inclusion in the review. As at abstract stage, indecisions at full paper assessment were discussed as necessary, and in cases of disagreement were referred to a third reviewer (PRW). The reasons for exclusion at this stage were documented for articles judged to be ineligible.

Assessment of COS-STAD minimum standards

One reviewer (EG or SLG) independently assessed each of the COS development studies against the COS-STAD development standards [12]. A total of 12 criteria representing the 11 minimum standards were assessed in this study. Each criterion was assessed as yes (meeting that standard), no (not meeting that standard) or unsure (it was unclear whether the criteria had been met).

Data extraction

As described in full previously [14], data was extracted by one reviewer (EG or SLG) in relation to the study aim(s), health area, target population, interventions covered, methods of COS development and stakeholder groups involved. As described in the previous update, text was extracted to support the COS-STAD assessment being made and to aid discussion where necessary [6].

Data analysis and presentation of results

The review is reported in accordance with PRISMA guidelines [17] (S1 Checklist). Studies were described narratively, in text and tables. As previously described, the median and range were presented to summarise the number of the minimum standards met across all of the included COS studies; and percentage frequencies were used to report the number of COS that met each standard [6].

COS relevant to paediatric health conditions

To address the second aim of this study, we extracted information about whether children had been included as participants in all eligible COS development studies published to date, and noted which methods had been used to facilitate their participation.

Priority setting

To address the third aim of this study, the 25 most burdensome global diseases and injuries were identified from the updated Global Burden of Disease study [13]. The COMET database was searched (November 2020) for relevant or associated COS (published or ongoing) and were mapped to the leading causes of global disease burden. Data regarding health condition, publication year, scope, participating stakeholder groups and countries involved in the development process were extracted for each identified COS.

Results

Description of studies

Through database searching, automated ranking and manual screening, we identified fifty-six records meeting the inclusion criteria (Fig 1). We identified a further 25 records through database alerts and hand searching references. Of these 25 records, 19 were linked supplementary papers providing methodological detail relating to COS studies identified from the database search. Six new studies, which were included following hand searching, had either not been indexed in the bibliographic databases within the appropriate search timeframe or had been incorrectly excluded from an earlier review update.

Fig 1. Identification of studies.

Fig 1

In total, 81 reports were included in this sixth update of the annual systematic review of COS for research. These reports pertain to 33 new studies, with 29 linked papers, along with 19 papers linked to studies in the original review and previous updates. The 33 new studies describe the development of 37 individual COS (S2 Table). The sixth update increases the overall total of published COS studies for research to 370, relating to 447 COS.

Minimum standards

An overview of the minimum standard assessments is provided in Table 1, and by study in S3 Table. Of the 33 COS studies included in this update, six (18%) were deemed to have met all 12 criteria representing the 11 minimum standards for COS development (range = 4 to 12 criteria, median = 9 criteria). All 33 COS studies met all four minimum standards for scope, specifying the setting, health condition, population and intervention covered by the COS. Twenty-three (70%) COS met all three standards for stakeholders involved, including those who will use the COS in research, healthcare professionals and patients or their representatives. Six studies (18%) met all four standards [five criteria] for the consensus process. Thirteen studies (39%) considered both HCPs and patients’ views when developing this initial list of outcomes. The scoring process and consensus definition were clearly described a priori in fifteen studies (46%) and sixteen studies (49%), respectively. Sixteen studies (49%) described the criteria for including/dropping/adding outcomes a priori. Seventeen studies (52%) took care to avoid ambiguity of language used in the list of outcomes.

Table 1. COS minimum standards assessments summary (n = 33).

DOMAIN STANDARD NUMBER STANDARD STANDARD MET STANDARD UNCLEAR STANDARD NOT MET
N (%) N (%) N (%)
Scope specification 1 The research or practice setting(s) in which the COS is to be applied 33 (100) 0 0
2 The health condition(s) covered by the COS 33 (100) 0 0
3 The population(s) covered by the COS 33 (100) 0 0
4 The intervention(s) covered by the COS 33 (100) 0 0
Stakeholders involved 5 Those who will use the COS in research 28 (85) 2 (6) 3 (9)
6 Healthcare professionals with experience of patients with the condition 32 (97) 0 1 (3)
7 Patients with the condition or their representatives 25 (76) 0 8 (24)
Consensus process 8 Initial list of outcomes considered both healthcare professionals’ and patients’ views 13 (39) 3 (9) 17 (52)
9a A scoring process was described a priori 15 (46) 17 (52) 1 (3)
9b A consensus definition was described a priori 16 (49) 16 (49) 1 (3)
10 Criteria for including/dropping/adding outcomes were described a priori 16 (49) 16 (49) 1 (3)
11 Care was taken to avoid ambiguity of language used in the list of outcomes 17 (52) 15 (46) 1 (3)

Included studies

Of the 33 new studies identified in this update, 30 were published in 2019 and the remaining three studies were published in 2016, 2017 and 2018 (Fig 2). The COS were developed across 18 disease categories, with ‘Orthopaedics and trauma’ being the most prevalent area (Fig 3). Details regarding the scope, methods used to develop COS, stakeholders included, and their geographical locations are provided in S4S7 Tables for the 33 new COS studies included in this update, alongside the six previous systematic reviews. Public participation detail is provided in S8 Table. Details of note include the increase in the number of COS intended for use in both clinical research and routine clinical practice, which has increased from 11% (36/337) across the studies included in the previous reviews to 27% (n = 9/33) of the studies included in this update (See S4 Table). S7 Table displays the geographical locations of participants included in all published COS development studies. In comparison to the COS studies included in previous reviews, there have been increases in participation from stakeholders located in Asia (65% vs 24%), South America (39% vs 14%) and Africa (32% vs 9%). In addition, fifteen of the 33 new COS studies (45%) included in the current review reported the inclusion of participants from low and middle-income countries (LMICs), as defined by the Organization for Economic Co-operation and Development (OECD) Development Assistance Committee (DAC) list [18].

Fig 2. Year of first publication of each COS study (n = 370).

Fig 2

Fig 3. Number of COS developed in each disease category (n = 370).

Fig 3

COS relevant to paediatric health conditions

Of the 370 COS studies published up until the end of 2019, 82 (22%) are relevant to paediatric health conditions. All studies were published between 1992 and 2019, with 41/82 (50%) studies being published in the past 5 years. The 82 COS studies were developed across 22 disease categories, with neurology (n = 13) and gastroenterology (n = 10) being the most prominent areas. Of the 82 COS studies, 33 (40%) COS are for children, 30 (37%) COS are for adults and children, 14 (17%) COS are for infants and/or toddlers (aged ≤ 4 years), and 5 (6%) COS are for adolescents and adults. Excluding the 14 COS focussed on infants and/or toddlers, there are 68 COS where children (aged ≥ 5 years) could have participated in the development process. Of these 68 COS studies, 11 (16%) have had direct input from children (see Table 2). The methods used in these studies included the Delphi technique, surveys, interviews/focus groups, meetings, and online discussion.

Table 2. Details of COS including children within the development process.

Year Disease Category Disease Name Population Methods used
1 2009 Neurology Cerebral palsy Children Delphi survey
2 2012 Lungs & airways Asthma Children Survey
3 2015 Developmental, psychosocial, & learning problems Neurodisability Children Interviews; Focus groups; Prioritisation meeting
4 2015 Ear, nose & throat Cleft palate/ Otitis media Children Interviews; Survey
5 2016 Other—healthcare transition Chronic physical and medical conditions Children and young adults Delphi survey; Interviews
6 2017 Gastroenterology Functional constipation Children Delphi survey
7 2017 Gastroenterology Hirschsprung’s disease Adults and children Delphi survey
8 2017 Orthopaedics & trauma; Rheumatology Acute osteomyelitis/ Septic arthritis Children Interviews
9 2018 Neurology Epilepsy Children Delphi survey
10 2019 Neurology Rolandic epilepsy Children Delphi survey; Consensus meeting
11 1997—updated in 2019 Rheumatology Arthritis Children Online discussion board

Priority setting

Twenty-two of the 25 leading causes of global disease burden mapped to at least one relevant published or ongoing COS in the COMET database (see S9 Table): Neonatal disorders, Ischaemic heart disease, Stroke, Lower respiratory infections, Diarrhoeal diseases, Chronic obstructive pulmonary disease (COPD), Diabetes, Low back pain, Congenital birth defects, HIV/AIDS, Tuberculosis, Depressive disorders, Malaria, Headache disorders, Lung cancer, Chronic kidney disease, Other musculoskeletal disorders, Age-related hearing loss, Falls, Gynaecological diseases, Anxiety disorders and Dietary iron deficiency. There were no published or ongoing COS for the remaining three diseases and injuries: Road injuries, Cirrhosis and Self-harm.

Discussion

Thirty three new studies (relating to 37 COS), were identified and included in this sixth update to the systematic review of COS for research, as well as the COMET database (http://www.comet-initiative.org/studies/search). The annual publication of COS for research is consistent with previous updates [6]. Their inclusion in the COMET database ensures that the database content is both extensive and current.

Six (18%) of the 33 studies in this update met all of the minimum standards for COS development, comparable to the previous update where the minimum standards were considered for the first time and 20% of included studies met all of the minimum standards [6]. The reporting guideline for COS studies [19] was referenced in 39% of studies, less than the 60% in the previous update [6]. One explanation could be that COS developers may not be reporting all of the information necessary to assess whether the minimum standards have been met; alternatively, the COS published in 2019 may have been in progress before the standards were published.

COS can be developed for research, routine care, or both. While the focus of this review is COS for research, there is current interest in identifying whether COS might have a role throughout the healthcare research ecosystem [20]. In the previous update to this review, we highlighted the percentage of COS for research that also intend their recommendations for use in routine care had remained constant at around 11% [6]. The number of COS intended for both research and routine care in this update has increased to 27% of studies. Further research is needed to understand and optimise the methods used to develop COS for multiple settings.

Participation from continents other than Europe and North America continues to increase, including Asia, South America and Africa. Almost half of the studies included participants from LMICs, but this remains an important area for improvement.

The inclusion of public representatives remains high in this review with 76% of studies including this group of stakeholders in the development process. An almost 10% increase in the number of studies that met the minimum standard for taking care around language suggests more developers have considered how to facilitate patient participation. Of particular interest in this update was the participation of children in COS development; of the 68 published COS studies to date that are relevant to paediatric health conditions, 11 have included input from children. Although participation of children is gradually increasing, with nine of these 11 COS being published in the past five years, there is still room for improvement. COS developed for paediatric conditions need to incorporate the perspectives of children, alongside parents and other adults, to ensure that the outcomes measured in both research and clinical practice are ones that matter to children. Key to producing COS that are relevant to children is making sure the research methods used are suitable for them. Across the 11 COS studies that have included children, the methods used have largely been designed for adult participants and it is uncertain whether these are suitable for children. Over recent years, there has been a general increase in COS relating to paediatric conditions, with over 70 currently under development. Thus, there is a pressing need to identify suitable methods for engaging children as participants in COS development studies. Such methods will enable them to meaningfully contribute to the development of COS and ensure that the outcomes measured are ones that matter.

Three of the leading causes of global disease burden, identified from the updated Global Burden of Disease study [13], did not have a potentially relevant COS in the COMET database. This is an improvement from the first time this exercise was carried out to identify gaps in COS development (carried out in January 2016) where it was reported that 12 COS did not have an applicable COS [3]. In addition to the Global Burden of Disease study, gaps in COS development have been identified in relation to Cochrane systematic reviews, where no published or ongoing COS were found for two of 52 Cochrane Reviews Groups (CRGs) [21]. The current gaps in existing COS should be considered by COS developers to identify priority areas for COS development.

Conclusion

This annual publication of COS for research has demonstrated an increase in COS developed for both research and routine clinical practice, along with growth in the participation of stakeholders globally. There is a pressing need to identify suitable methods for engaging children as participants in COS development studies. This study can be used by COS developers to help identify gaps and priority areas for COS development.

Supporting information

S1 Checklist. PRISMA checklist for content of a systematic review.

(DOC)

S1 Table. Search strategy.

(DOCX)

S2 Table. Table of reports included in the updated review.

(DOCX)

S3 Table. COS minimum standards: Assessment by study (n = 33).

(DOCX)

S4 Table. The scope of included studies (n = 370).

(DOCX)

S5 Table. The methods used to develop COS (n = 370).

(DOCX)

S6 Table. Participant groups involved in selecting outcomes for inclusion in COS (n = 370).

(DOCX)

S7 Table. Geographical locations of participants included in the development of each COS (n = 312).

(DOCX)

S8 Table. Nature of patient participation where detail is reported (n = 25).

(DOCX)

S9 Table. Details about COS relevant to 25 disease with the highest global prevalence.

(DOCX)

Acknowledgments

We acknowledge Jane Blazeby (Bristol University) and Mike Clarke (Queen’s University Belfast) for their involvement in the conceptualisation and methodology in the original systematic review on which this update is based.

We acknowledge Aurélie Névéol (University Paris-Saclay) and Christopher Norman (University Paris-Saclay, University of Amsterdam) for running the automated screening model and generating the ranked list of citations used in this update.

Data Availability

All relevant data are within the manuscript and its Supporting information files.

Funding Statement

Professor Williamson is a National Institute for Health Research (NIHR) Senior Investigator (award number NF-SI_0513-10025). Karen Matvienko-Sikar is supported by a Health Research Board Applying Research into Policy and Practice Fellowship (award number HRB-ARPP-A-011). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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Decision Letter 0

Charles S Wiysonge

4 Sep 2020

PONE-D-20-21185

Choosing important health outcomes for comparative effectiveness research: 6th annual update to a systematic review of core outcome sets for research

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Reviewer #2: Yes

**********

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**********

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**********

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**********

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Reviewer #1: I enjoyed reading this but I have a problem with it. It isn't what it purports to be in my view. It is not - in any sense - a "systematic review" as that term is usually understood. It is in effect an Annual Report on newly published course outcome sets for research. There is then some limited comparison of those published in 2019 (the subject of this paper) with those published earlier. But where these comparisons are made, no attempt is made at any statistical analysis. What I mean by that is that the differences observed (between this year's data and pervious years) may have occurred by chance alone. But this possibility is not measured, nor is it even entertained. It is assumed that the differences are "real" and conclusions drawn or conjectures made.

There is a second, distinct piece of work embedded in this paper. This is a study looking at COS developed for conditions in children. This could be a stand alone piece of work

The third, equally distinct project is a brief look at what proportion of the most prevalent global diseases and injuries are 'covered' by a COS. The facts as reported will be interesting to some people. Perhaps. But this is really only a 'reporting' exercise.

Overall, I don't see this as a coherent piece of research. It's a Report. I could see it being published by COMET on their website.

What would it have to be to be more than that? Well, it would have to answer an important question. Such as - how has the development of COS improved over time? Has the quality of the methods used for such development improved? Has the quality of reporting of those methods improved? As it stands, the paper simply doesn't answer a clear question.

Reviewer #2: This is an updated review of articles that report the development of a core outcome set (COS). The authors report the number and quality of new COSs that have been developed in 2019. In addition, the authors report that 16% of 68 COSs that concern children in the Comet database included children in the development-process and still 6 of 25 globally prevalent diseases do not have a COS.

General comments: The COMET database is an important and interesting project and it is interesting to see how the COSs are developing. It is a bit difficult to see the difference between the update and the extra review of the COMET database. For the update it seems that the authors want to show the timeline of COSs development, but they don’t mention this in the abstract. It is also difficult to judge the timeline as the comparison what is already there (447 COSs?) comes only half way the results. It is unclear how the 2019 increase relates to the other increases and what the authors expected.

More detailed comments

- In the abstract mention the total amount of COSs in the Comet database and the timeline.

- In the methods, better separate the COSs update, the exploration of child involvement and COSs for prevalent diseases. Please write children and young adults in full or just define and use children. CYP is used for cytochrome P-450. In general, it is not clear what is meant with young persons. Is it young adults or does this include persons younger than 18?

- It is unclear how the minimum standards for COS development were judged. The authors say the assessed twelve criteria, but I assume that domains are meant. For each domain there should be criteria that discern compliance from non-compliance. What are for example the criteria for using unambiguous language?

- The use of only the 25% top ranked references coming up in the search sounds like am arbitrary cut-off point. Now that the authors have used this automated search several times, could they reflect on the efficiency and accuracy of it? When there are 25 out of 81 records that do not come up in the search and that are deemed important, the search does not seem to be very sensitive.

- It would be good to indicate uncertainty in the findings. For example, when the authors report that 39% of the studies report using COS reporting guideline and stating that this is less than the 60% previously reported.

- Six of the most prevalent diseases do not have a COS. Can the authors indicate mechanisms by which this situation could improve?

- The authors conclude that the production of COS remains consistently high. This depends on the number to be achieved. Do the authors have an idea how many COSs would be needed and can they relate the findings to this number?

**********

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Reviewer #2: Yes: Jos Verbeek

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Attachment

Submitted filename: PLOS ONE review.pdf

PLoS One. 2021 Jan 12;16(1):e0244878. doi: 10.1371/journal.pone.0244878.r002

Author response to Decision Letter 0


18 Nov 2020

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

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Response: We have checked that the manuscript matches style requirements and made any necessary changes.

2. Thank you for stating the following in the Acknowledgments Section of your manuscript:

"Professor Williamson is a National Institute for Health Research (NIHR) Senior Investigator (award number NF-SI_0513-10025). The views expressed in this article are those of the author(s) and not necessarily those of the NIHR, or the Department of Health and Social care. Karen Matvienko-Sikar is supported by a Health Research Board Applying Research into Policy and Practice Fellowship (award number HRB-ARPP-A-011)."

We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form.

Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows:

"This work was funded through a National Institute for Health Research (NIHR) Senior

Investigator award to Professor Williamson (award number NF-SI_0513-10025). The

funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

Response: Funding information have been removed from the manuscript. Please could you update the Funding Statement as follows:

“Professor Williamson is a National Institute for Health Research (NIHR) Senior Investigator (award number NF-SI_0513-10025). Karen Matvienko-Sikar is supported by a Health Research Board Applying Research into Policy and Practice Fellowship (award number HRB-ARPP-A-011). The

funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

3. Thank you for stating the following in the Competing Interests section:

"EG and PRW are members of the COMET Management Group. SG and KMS have

declared that no competing interests exist."

Please confirm that this does not alter your adherence to all PLOS ONE policies on sharing data and materials, by including the following statement: "This does not alter our adherence to PLOS ONE policies on sharing data and materials.” (as detailed online in our guide for authors http://journals.plos.org/plosone/s/competing-interests). If there are restrictions on sharing of data and/or materials, please state these. Please note that we cannot proceed with consideration of your article until this information has been declared.

Please include your updated Competing Interests statement in your cover letter; we will change the online submission form on your behalf.

Response: We have included our updated Competing Interests statement in our cover letter.

Reviewer #1: I enjoyed reading this but I have a problem with it. It isn't what it purports to be in my view. It is not - in any sense - a "systematic review" as that term is usually understood. It is in effect an Annual Report on newly published course outcome sets for research. There is then some limited comparison of those published in 2019 (the subject of this paper) with those published earlier. But where these comparisons are made, no attempt is made at any statistical analysis. What I mean by that is that the differences observed (between this year's data and pervious years) may have occurred by chance alone. But this possibility is not measured, nor is it even entertained. It is assumed that the differences are "real" and conclusions drawn or conjectures made.

Response: We thank the reviewer for their comments. The purpose of a systematic review is to identify and synthesise all available primary evidence that meets pre-specified eligibility criteria to answer a specific research question. Our study complies with this definition as we are presenting the annual update of a systematic review by aiming to identify all COS development studies published in 2019. We describe the methodological approaches used in these studies to enable us to highlight areas for improvement in COS development. The primary aim of the review has been expanded to make this clear (see lines 107-109). No statistical analysis was performed, rather a narrative approach was undertaken to synthesise data. We have identified all published COS so are not presenting a sample but rather the population of studies. As we state in the manuscript, the objective of the review is “to describe current knowledge and trends about COS development methods to help inform discussion around what COS developers are currently doing; in both what they are doing consistently, what is becoming standard methods of development, what COS developers are doing well, improvements in methods of COS development, and where there might be gaps in health areas or where methodological research is needed” (see lines 76-81).

There is a second, distinct piece of work embedded in this paper. This is a study looking at COS developed for conditions in children. This could be a stand alone piece of work. The third, equally distinct project is a brief look at what proportion of the most prevalent global diseases and injuries are 'covered' by a COS. The facts as reported will be interesting to some people. Perhaps. But this is really only a 'reporting' exercise.

Response: The secondary aim, which relates to the inclusion of children in COS development studies is a related piece of work, and this additional data extraction complements the review. In recent years, the importance of including children in the COS development process has been emphasised. Therefore, we felt it was important to look back at all published COS development studies to explore their participation. Going forward we will continue to extract this data and will look to see whether the inclusion of children in COS development increases over time. The third aim, which relates to identifying COS applicable to the most prevalent global diseases is also relevant, as it serves to identify gaps where COS development work is needed. By including this piece of work in our manuscript, we can highlight the priority areas for COS development.

Overall, I don't see this as a coherent piece of research. It's a Report. I could see it being published by COMET on their website. What would it have to be to be more than that? Well, it would have to answer an important question. Such as - how has the development of COS improved over time? Has the quality of the methods used for such development improved? Has the quality of reporting of those methods improved? As it stands, the paper simply doesn't answer a clear question.

Response: Our manuscript describes the current knowledge and trends about COS development methods and identifies research gaps in relation to the methodology of COS development and important health areas where COS do not exist. We have described above how the three aims of this research are related and have added additional detail throughout to enhance clarity. The data in supplementary tables 4-7 show how COS development has improved over time. Text has been added to the results section to highlight improvements (see lines 243-247).

Line 53: Does “these” refer to the studies, the COS or both?

Response: We are referring to the studies and have now clarified this in the manuscript.

Line 54: Systematic reviews are usually reviews of studies. It isn’t clear if “a systematic review of COS….” is (a) a systematic review of the studies reporting the development of COS (in which case one might expect judgements to be made about the qualities of those studies, as is usual in any other type of systematic review), or (b) more simply a catalogue of the COSs themselves. If it is (a) a better phrase would be “a systematic review of studies reporting the development of COSs”

Response: The text has been edited.

Line 55 – 62: The content of these lines suggests that it is important to review how COSs have been developed

Response: The reviewer’s interpretation is correct. It is important to review how COS have been developed, which is why we assessed each of the published COS studies against the COS-STAD development standards (see Table 1).

Line 77: Did they assess “each of the COS…” or did they assess the development of the COS, or more specifically the studies reporting the development of the COS? If the latter, there is always the possibility that the quality of the reporting (as distinct from the quality of the development itself) may affect their conclusions.

Response: The text has been edited. We have assessed the development of the COS, but we acknowledge in the discussion section, that COS developers may not be reporting all of the information necessary to assess whether the standards have been met (see lines 290-293).

Line 84: The first aim – to identify new COSs published or indexed in 2019 – is clear and unambiguous.

Response: Thank you.

Line 85: The question: have CYP been included as participants in the development of COSs relevant to CYP? is not an unreasonable one, but does not flow easily from the first. Nor the question about the methods used to facilitate their participation. I think these should be clearly listed as secondary aims of the project.

Response: The text has been edited.

Line: 86 The third aim is also distinct but more related to the first than the one relating to CYP. It is also the first mention of an attempt by the authors to look for “ongoing” COS development exercises.

Response: The third aim relates to both published and ongoing COS studies. A sentence has been added to the introduction to make readers aware that the COMET database also includes details of ongoing COS development work (see lines 75-76).

Line 88: The sentence beginning “Included COS ….” describes a “Method”

Response: This sentence has been deleted.

Line 92: In any systematic review – even an update – the reader should expect (as a minimum) to know how the included studies were “located, appraised and synthesised”. The inclusion and exclusion criteria should be very clear, and listed bulleted form if necessary

Response: Additional details relating to the inclusion and exclusion criteria have now been added (see lines 122-138).

Line 100: The sentence beginning “Studies were eligible for inclusion if…..” is better than the previous sentence which appears redundant. But a clear list would be better in my view. I can find no exclusion criteria

Response: Exclusion criteria has been added (see lines 134-138).

Line 135: I am finding it a bit wearrisome continually reading the phrase “as in the previous review update”. My view is that this submitted article should stand alone and the reader should not have to consult the previous papers to know what was done. An “updated” systematic review should be cumulative and provide an up-to-date review of the totality of the literature to date. This is quite different from saying – “here are the data from studies that result from searches covering the last 12 months”.

Response: Edits have been made throughout to ensure the reader does not have to consult the previous papers to understand what was done in the current review.

Line 144: The decision to extract information about CYP is interesting in the light of my last comments. The Authors could have gone back and extracted these data from all the studies identified in previous iterations of the review. It looks to me as if they have not done that. They are introducing a “change to protocol” here (and at least are being explicit about that, so I cannot criticise that) but this really is a separate thread of work compared with the main essence of the project, which is updating their review.

Response: We have extracted information about the participation of children in all COS development studies published to date, including those identified in the previous reviews as well as the current update. Text has been added to make this clear (see lines 188-190).

Line 166: I find myself wanting to know which are the 37 new COSs? Looking at ST Table, I cannot work this out. The Table focuses (in the first column) on the reports. Why not have the new COS’s in column 1 and the reports in a later column? Also, why not have a second Table with the studies identified which relate to COSs in the existing database?

Response: The studies linked to COS included in previous reviews are signified in the S2 Table [^] with a footnote. The 33 new studies are also signified as either [*] having considered outcomes while addressing wider clinical trial design issues (n=2); or [**] having specifically considered outcome selection and measurement (n=31). Three of the 33 new COS studies include >1 COS and footnotes have been added to signify these studies [a, b, c].

Reviewer #2: This is an updated review of articles that report the development of a core outcome set (COS). The authors report the number and quality of new COSs that have been developed in 2019. In addition, the authors report that 16% of 68 COSs that concern children in the Comet database included children in the development-process and still 6 of 25 globally prevalent diseases do not have a COS.

General comments: The COMET database is an important and interesting project and it is interesting to see how the COSs are developing. It is a bit difficult to see the difference between the update and the extra review of the COMET database. For the update it seems that the authors want to show the timeline of COSs development, but they don’t mention this in the abstract. It is also difficult to judge the timeline as the comparison what is already there (447 COSs?) comes only half way the results. It is unclear how the 2019 increase relates to the other increases and what the authors expected.

Response: Text has been edited to distinguish between the primary and secondary aims of this work and additional details has been added throughout the manuscript to enhance clarity. The objective of the review is not to provide a direct comparison of the 2019 COS studies with those that have previously been published, as the numbers are too small to compare. Rather, our manuscript describes the current knowledge and trends about COS development methods and identifies areas where methodological research is needed. In the introduction, we do state the following: “COS development is still a relatively new area of research, and therefore it is important to describe current knowledge and trends about COS development methods to help inform discussion around what COS developers are currently doing; in both what they are doing consistently, what are becoming standard methods of development, what COS developers are doing well, improvements in methods of COS development, and where there might be gaps in health areas or where methodological research is needed.” The data in supplementary tables 4-7 show how COS development has improved over time and text has been added to the results section to highlight improvements over time (see lines 241-247).

More detailed comments

- In the abstract mention the total amount of COSs in the Comet database and the timeline.

Response: Text has been added to the abstract (see lines 43-45).

- In the methods, better separate the COSs update, the exploration of child involvement and COSs for prevalent diseases. Please write children and young adults in full or just define and use children. CYP is used for cytochrome P-450. In general, it is not clear what is meant with young persons. Is it young adults or does this include persons younger than 18?

Response: We have used the PLoS One Level Headings to better separate the systematic review update, the exploration of child participation in COS and the COS priority setting work relating to the most prevalent global disease. In addition, we have replaced ‘CYP’ with ‘children’ throughout, as we are only referring to persons younger than 18.

- It is unclear how the minimum standards for COS development were judged. The authors say the assessed twelve criteria, but I assume that domains are meant. For each domain there should be criteria that discern compliance from non-compliance. What are for example the criteria for using unambiguous language?

Response: The COS were assessed against the 11 minimum standards (a total of 12 criteria) as: yes (meeting that standard), no (not meeting that standard) or unsure (it was unclear whether the criteria had been met). The COS-STAD recommendations publication (Kirkham et al., 2027) provides explanatory information for each of the standards, which are used to determine whether or not a COS has complied with the standard. Regarding standard 11 (‘Care was taken to avoid ambiguity of language used in the list of outcomes’); the recommendations state the following:

“The language used to describe each potential outcome for the core set should be unambiguous (standard 11). When considering language, adequate consideration should be given to getting this right for those involved in the consensus process as well as for potential users, which may lead to the use of both plain language descriptions and medical terms, with these pilot tested for understanding.”

- The use of only the 25% top ranked references coming up in the search sounds like am arbitrary cut-off point. Now that the authors have used this automated search several times, could they reflect on the efficiency and accuracy of it? When there are 25 out of 81 records that do not come up in the search and that are deemed important, the search does not seem to be very sensitive.

Response: The cut-off for screening was set to the top 25% of abstracts in ranked priority order, as per the evaluation of the automated screening model (Norman C, Gargon E, Leeflang M, Neveol A, Williamson PR. Evaluation of an automatic article selection method for timelier updates of the COMET Core Outcome Set database. Database 2019;2019(baz109). pmid:31697361). In the fourth update, we reported on the efficiency and accuracy of the automated screening model:

“By using the automated screening methods to rank citations, we screened 75% less abstracts (1649/5878 abstracts), and consequently screened 50% less full texts than in the previous update (274 compared to 514 in the previous update). We estimate this to have saved approximately 110 hours, with the screening taking only 73 hours. All abstracts excluded by automated ranking were found to be correctly excluded (Fig 1).”

The 25 record that did not come out in the search would not have been expected to, as these records predominantly consist of linked supplementary papers, which were identified from reading the main COS publication, which did come out in the search. There were six new COS studies included within the 25 records. The reasons they were not identified in our search was because they had either not been indexed in the bibliographic databases within the appropriate search timeframe or had been incorrectly excluded from an earlier review update. Text has been added to Figure 1 and the results section to clarify this (see lines 204-208).

- It would be good to indicate uncertainty in the findings. For example, when the authors report that 39% of the studies report using COS reporting guideline and stating that this is less than the 60% previously reported.

Response: We have identified all published COS so are not presenting a sample but rather the population of studies, and describing those studies rather than testing for differences.

- Six of the most prevalent diseases do not have a COS. Can the authors indicate mechanisms by which this situation could improve?

Response: The current gaps in existing COS should be considered by COS developers to identify priority areas for COS development. By highlighting these important gaps in an open access publication, we hope to draw attention to this issue, which will hopefully lead to improvements. We will disseminate our findings to research funders who endorse consideration and fund development of COS (see https://www.comet-initiative.org/COSEndorsement/TrialFunders) by forwarding the link to the open access article.

- The authors conclude that the production of COS remains consistently high. This depends on the number to be achieved. Do the authors have an idea how many COSs would be needed and can they relate the findings to this number?

Response: We agree and have removed the text which states that publication of COS remains high.

There is no target number of COS to be achieved, as it depends whether or not there is a need for a COS to be developed ion a specific disease area. By including the assessment of the relevance of COS to the 25 leading causes of global disease burden, we have been able to highlight priority areas for COS development.

Decision Letter 1

Charles S Wiysonge

18 Dec 2020

Choosing important health outcomes for comparative effectiveness research: 6th annual update to a systematic review of core outcome sets for research

PONE-D-20-21185R1

Dear Dr. Gorst,

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Academic Editor

PLOS ONE

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Acceptance letter

Charles S Wiysonge

2 Jan 2021

PONE-D-20-21185R1

Choosing important health outcomes for comparative effectiveness research: 6th annual update to a systematic review of core outcome sets for research

Dear Dr. Gorst:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Checklist. PRISMA checklist for content of a systematic review.

    (DOC)

    S1 Table. Search strategy.

    (DOCX)

    S2 Table. Table of reports included in the updated review.

    (DOCX)

    S3 Table. COS minimum standards: Assessment by study (n = 33).

    (DOCX)

    S4 Table. The scope of included studies (n = 370).

    (DOCX)

    S5 Table. The methods used to develop COS (n = 370).

    (DOCX)

    S6 Table. Participant groups involved in selecting outcomes for inclusion in COS (n = 370).

    (DOCX)

    S7 Table. Geographical locations of participants included in the development of each COS (n = 312).

    (DOCX)

    S8 Table. Nature of patient participation where detail is reported (n = 25).

    (DOCX)

    S9 Table. Details about COS relevant to 25 disease with the highest global prevalence.

    (DOCX)

    Attachment

    Submitted filename: PLOS ONE review.pdf

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting information files.


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