Ana da Silva Filipe
Ana da Silva Filipe
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,#,
James G Shepherd
James G Shepherd
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,#,
Thomas Williams
Thomas Williams
2MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK
2,#,
Joseph Hughes
Joseph Hughes
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,#,
Elihu Aranday-Cortes
Elihu Aranday-Cortes
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Patawee Asamaphan
Patawee Asamaphan
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Shirin Ashraf
Shirin Ashraf
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Carlos Balcazar
Carlos Balcazar
3Queen’s Medical Research Institute, University of Edinburgh, Edinburgh, UK
3,
Kirstyn Brunker
Kirstyn Brunker
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Alasdair Campbell
Alasdair Campbell
4Royal Hospital for Children and Young People, Edinburgh, UK
4,
Stephen Carmichael
Stephen Carmichael
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Chris Davis
Chris Davis
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Rebecca Dewar
Rebecca Dewar
5Virology Department, Royal Infirmary of Edinburgh, Edinburgh, UK
5,
Michael D Gallagher
Michael D Gallagher
6The Roslin Institute, University of Edinburgh, Edinburgh, UK
6,
Rory Gunson
Rory Gunson
7West of Scotland Specialist Virology Centre, Glasgow Royal Infirmary, Glasgow, UK
8Institute of Infection Immunity and Inflammation, University of Glasgow, Glasgow, UK
7,8,
Verity Hill
Verity Hill
9Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
9,
Antonia Ho
Antonia Ho
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Ben Jackson
Ben Jackson
9Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
9,
Edward James
Edward James
10Borders General Hospital, Melrose, UK
10,
Natasha Jesudason
Natasha Jesudason
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Natasha Johnson
Natasha Johnson
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
E Carol McWilliam Leitch
E Carol McWilliam Leitch
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Kathy Li
Kathy Li
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Alasdair MacLean
Alasdair MacLean
7West of Scotland Specialist Virology Centre, Glasgow Royal Infirmary, Glasgow, UK
7,
Daniel Mair
Daniel Mair
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
David A McAllister
David A McAllister
11Public Health Scotland, Glasgow, UK
12Institute of Health and Wellbeing, University of Glasgow, Glasgow, UK
11,12,
John T McCrone
John T McCrone
9Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
9,
Sarah E McDonald
Sarah E McDonald
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Martin P McHugh
Martin P McHugh
5Virology Department, Royal Infirmary of Edinburgh, Edinburgh, UK
13School of Medicine, University of St Andrews, St Andrews, UK
5,13,
A Keith Morris
A Keith Morris
14Victoria Hospital, Kirkcaldy, UK
14,
Jenna Nichols
Jenna Nichols
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Marc Niebel
Marc Niebel
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Kyriaki Nomikou
Kyriaki Nomikou
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Richard J Orton
Richard J Orton
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Áine O’Toole
Áine O’Toole
9Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
9,
Massimo Palmarini
Massimo Palmarini
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Benjamin J Parcell
Benjamin J Parcell
15Ninewells Hospital and Medical School, Dundee, UK
15,
Yasmin A Parr
Yasmin A Parr
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Andrew Rambaut
Andrew Rambaut
9Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
9,
Stefan Rooke
Stefan Rooke
8Institute of Infection Immunity and Inflammation, University of Glasgow, Glasgow, UK
8,
Sharif Shaaban
Sharif Shaaban
11Public Health Scotland, Glasgow, UK
11,
Rajiv Shah
Rajiv Shah
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Joshua B Singer
Joshua B Singer
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Katherine Smollett
Katherine Smollett
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Igor Starinskij
Igor Starinskij
7West of Scotland Specialist Virology Centre, Glasgow Royal Infirmary, Glasgow, UK
7,
Lily Tong
Lily Tong
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Vattipally B Sreenu
Vattipally B Sreenu
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Elizabeth Wastnedge
Elizabeth Wastnedge
5Virology Department, Royal Infirmary of Edinburgh, Edinburgh, UK
5;
The COVID-19 Genomics UK (COG-UK) Consortium16,
Matthew T G Holden
Matthew T G Holden
11Public Health Scotland, Glasgow, UK
13School of Medicine, University of St Andrews, St Andrews, UK
11,13,
David L Robertson
David L Robertson
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
1,
Kate Templeton
Kate Templeton
5Virology Department, Royal Infirmary of Edinburgh, Edinburgh, UK
5,
Emma C Thomson
Emma C Thomson
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
17Department of Clinical Research, London School of Hygiene and Tropical Medicine, London, UK
1,17,✉
1MRC–University of Glasgow Centre for Virus Research (CVR), Glasgow, UK
2MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK
3Queen’s Medical Research Institute, University of Edinburgh, Edinburgh, UK
4Royal Hospital for Children and Young People, Edinburgh, UK
5Virology Department, Royal Infirmary of Edinburgh, Edinburgh, UK
6The Roslin Institute, University of Edinburgh, Edinburgh, UK
7West of Scotland Specialist Virology Centre, Glasgow Royal Infirmary, Glasgow, UK
8Institute of Infection Immunity and Inflammation, University of Glasgow, Glasgow, UK
9Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
10Borders General Hospital, Melrose, UK
11Public Health Scotland, Glasgow, UK
12Institute of Health and Wellbeing, University of Glasgow, Glasgow, UK
13School of Medicine, University of St Andrews, St Andrews, UK
14Victoria Hospital, Kirkcaldy, UK
15Ninewells Hospital and Medical School, Dundee, UK
16https://www.cogconsortium.uk
17Department of Clinical Research, London School of Hygiene and Tropical Medicine, London, UK
Subject terms: SARS-CoV-2, Viral epidemiology
© The Author(s), under exclusive licence to Springer Nature Limited 2021
This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
