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PLOS One logoLink to PLOS One
. 2021 Jan 20;16(1):e0244081. doi: 10.1371/journal.pone.0244081

Validation of prognostic indices for short term mortality in an incident dialysis population of older adults >75

Bjorg Thorsteinsdottir 1,2,3,4,*, LaTonya J Hickson 4,5, Rachel Giblon 3,6, Atieh Pajouhi 1, Natalie Connell 2, Megan Branda 3,7, Amrit K Vasdev 1, Rozalina G McCoy 1,4, Ladan Zand 5, Navdeep Tangri 8,9, Nilay D Shah 3,6
Editor: Davide Bolignano10
PMCID: PMC7816982  PMID: 33471808

Abstract

Rational and objective

Prognosis provides critical knowledge for shared decision making between patients and clinicians. While several prognostic indices for mortality in dialysis patients have been developed, their performance among elderly patients initiating dialysis is unknown, despite great need for reliable prognostication in that context. To assess the performance of 6 previously validated prognostic indices to predict 3 and/or 6 months mortality in a cohort of elderly incident dialysis patients.

Study design

Validation study of prognostic indices using retrospective cohort data. Indices were compared using the concordance (“c”)-statistic, i.e. area under the receiver operating characteristic curve (ROC). Calibration, sensitivity, specificity, positive and negative predictive values were also calculated.

Setting & participants

Incident elderly (age ≥75 years; n = 349) dialysis patients at a tertiary referral center.

Established predictors

Variables for six validated prognostic indices for short term (3 and 6 month) mortality prediction (Foley, NCI, REIN, updated REIN, Thamer, and Wick) were extracted from the electronic medical record. The indices were individually applied as per each index specifications to predict 3- and/or 6-month mortality.

Results

In our cohort of 349 patients, mean age was 81.5±4.4 years, 66% were male, and median survival was 351 days. The c-statistic for the risk prediction indices ranged from 0.57 to 0.73. Wick ROC 0.73 (0.68, 0.78) and Foley 0.67 (0.61, 0.73) indices performed best. The Foley index was weakly calibrated with poor overall model fit (p <0.01) and overestimated mortality risk, while the Wick index was relatively well-calibrated but underestimated mortality risk.

Limitations

Small sample size, use of secondary data, need for imputation, homogeneous population.

Conclusion

Most predictive indices for mortality performed moderately in our incident dialysis population. The Wick and Foley indices were the best performing, but had issues with under and over calibration. More accurate indices for predicting survival in older patients with kidney failure are needed.

Introduction

Optimal shared decision making is predicated on informed and evidence-based conversations between the patient, caregiver, and clinician. For people with end stage renal disease (ESRD) the decision about pursuing renal replacement therapy (RRT) requires a clear understanding of the differences in prognosis with initiation of dialysis, pursuit of kidney transplantation, or maintenance of conservative therapy [1, 2]. This conversation is particularly important for patients for whom dialysis is a destination therapy, and whose prognosis while receiving dialysis may be poor [35]. Many nephrologists and primary care clinicians, hesitate to share prognostic information with patients [6] and feel unprepared for discussions about prognosis and goals of care [69]. This hesitancy stems, in part, from lack of a commonly accepted and widely used standard for predicting and communicating prognostic information to patients and caregivers. Absence of real-time prognostic guidance may contribute to the current default to pursue more aggressive treatment options and deprive patients of the opportunity to make informed choices about their health and healthcare [1012].

The rate of incident ESRD is highest among older adults [13], with high treatment and symptom burden [14] resulting on average in 44.2% of older patients dying within first six months of dialysis initiation [5]. Once on dialysis upward of 50% of elderly patients choose to withdrawal treatment before death [15]. Several prognostic indices have been developed to predict mortality in dialysis patients [1626]. However, there has been limited uptake of these tools into routine clinical practice and limited research of their utility and impact for shared decision making especially in the oldest patients. The available indices have variable performance with most have moderate to good accuracy in development cohorts that do not always hold in external validation.

Better understanding of the generalizability, performance, and advantages/disadvantages of the available prognostic mortality indicators is needed to assess their utility in real-world populations. The primary aim of the study was therefore to examine the performances of the available prognostic indices in a cohort of elderly (aged 75 years and older) patients newly initiated on RRT.

Methods

This was a prognostic index validation study, following the TRIPOD checklist for prediction model validation [27].

Study design and population

The cohort included all adults aged 75 years and older who initiated any type of RRT from January 1, 2007, through December 31, 2011 in the Mayo Clinic Dialysis Services (MCDS) which provides all RRT services in our health system and serves a general population of 385,000 patients in Southeast Minnesota, Northern Iowa, and Southwest Wisconsin, through 8 community based HD facilities as well as inpatient HD. Patients were excluded if they did not provide the institutions generic research authorization, in accordance with Minnesota state law, or if they initiated RRT at another institution or if they had previously received a kidney transplant. Mayo Clinic Institutional Review Board reviewed and approved this study. The de-identified study dataset can be made available upon request from the corresponding author.

Prognostic indices

We identified 11 indices validated for use at RRT initiation, predicting short term survival (3–6 months), through a systematic review of mortality prediction indices [16]. We had the necessary data to calculate 6 of the indices, three (Foley, REIN and NCI) [18, 22, 28] had been previously validated externally, whereas for the other three (Updated REIN, Wick and Thamer) [19, 24, 29], this paper serves as the first external validation. The indices were developed and tested in cohorts of different, size and composition general vs. geriatric and varied in their inclusion or exclusion of patients with acute kidney injury AKI (Table 1). Most had a c-statistic around 0.7–0.8 in development and internal validation but varied in their performance in previous external validation [16].

Table 1. Demographics for current population and development populations for the different indices.

MCDS cohort Foley NCI REIN Updated REIN Thamer Wick
N = 349 N = 325 N = 21043 N = 2500 N = 12500 N = 52796 N = 2199
Age, years (mean, SD) 81.5 (4.4) --- --- 80.9 (4.1) --- 76.9 (6.5) 75.2 (6.5)
Age, years (N, %) 75+ 18+ 65+ 75+ 75+ 67+ 65+
< 70 --- 255 (78.5) 7024 (33.4) --- --- --- 576 (26.2)
70–74 1 (0.3) 70 (21.5) 6406 (30.4) --- --- --- 556 (25.3)
75–79 154 (44.1) 4568 (21.7) 1192 (47.7) 5103 (41.0) --- 529 (24.5)
80–84 116 (33.2) 2224 (10.6) 925 (37.0) 4549 (36.5) --- 528 (24.0)
≥ 85 78 (22.4) 821 (3.9) 383 (15.3) 2801 (22.5) ---
Gender (N, %)
Male 230 (65.9) 211 (64.9) 9526 (45.3) 1509 (60.4) 7549 (60.4) 28422 (53.8) 1336 (60.8)
Race (N, %)
White 330 (94.6) --- --- --- --- 39794 (75.4) 2122 (96.5)
Black 2 (0.6) --- --- --- --- 10545 (20.0) ---
Other/missing 17 (4.9) --- 210435 --- --- 2504 (4.7) 77 (3.5)
Functional status (N, %)
Independent living/walks unassisted 241 (69.1) --- --- 1673 (66.9) 7355 (70.5) --- ---
Assisted living/needs assistance for ADL or transfers 12 (3.4) --- --- 619 (24.7) 2316 (22.2) 11108 (21.0) ---
NH/total dependency 34 (9.7) --- --- 208 (8.3) 709 (7.3) --- ---
Other/missing 62 (17.8) --- --- --- --- --- ---
Comorbidities (N, %)
CHF 114 (32.7) 122 (37.5) 6450 (30.7) 949 (38.0) 3960 (34.8) 27701 (52.5) 1143 (52.0)
Sepsis 65 (18.6) 9 (2.8) --- --- --- --- ---
CAD/ASHD 129 (37.0) 112 (34.5) 6505 (30.9) 879 (35.1) 3835 (32.8) 27272 (51.7) ---
CVA/TIA 30 (8.6) --- 3418 (16.2) 311 (12.4) 1549 (13.2) --- 579 (26.3)
PVD 44 (12.6) 19 (5.9) 1173 (5.6) 746 (29.9) 2663 (23.5) 14550 (27.6) 265 (12.1)
COPD 38 (10.9) --- 3077 (14.6) 335 (13.4) 1739 (14.9) 14806 (28.0) 883 (40.2)
Liver Disease 1 (0.3) 3 (0.9) 1658 (7.9) 22 (0.9) 126 (1.1) --- 38 (1.7)
Dysrhythmia 150 (43.0) 38 (11.7) 2184 (10.4) 799 (32.0) 3916 (33.3) --- 541 (24.6)
Cancer 100 (28.7) 20 (6.2) 1751 (8.3) 231 (9.2) 1487 (12.6) 7423 (14.1) 287 (13.1)
Diabetes 98 (28.1) 64 (19.7) 10915 (51.9) 933 (37.3) 4871 (40.4) 30843 (58.4) 1275 (58.0)
Hypertension --- 55 (16.9) --- --- --- --- 2049 (93.2)
Smoker 12 (3.4) 55 (16.9) --- --- --- 1841 (3.5) ---
Weight mean (SD) 82.6 (18.2) --- --- --- --- --- ---
BMI, kg/m2 mean, (SD) 28.8 (5.7) --- --- --- --- 28.0 (6.9) ---
BMI, kg/m2 N, (%)
<18.5 --- --- --- 164 (6.6) 430 (4.6) --- ---
18.5–25 --- --- --- 1232 (49.3) 4370 (46.9) --- ---
≥25 --- --- --- 1103 (44.1) 4510 (48.5) --- ---
Hemoglobin mean, (SD) 10.3 (1.6) --- --- --- --- 10.0 (1.5) ---
Serum albumin, g/dl (mean, SD) 3.3 (0.6) < 3g/dL --- < 25 g/L --- 3.2 (0.65) ---
65 (20.0%)3 864 (9.3)
Serum Phosphate 5.2 (1.8) --- --- --- --- --- ---
Serum creatinine 3.8 (2.0) --- --- --- --- --- ---
eGFR (ml/min/1.73 m2) 15.0 (14.0) --- --- --- --- 12.1 (5.1) ---
Formula used for GFR calculation CKD-EPI --- --- --- --- CKD-Epi CKD-Epi
0–9.9 103 (29.5) --- 1330 (60.5) --- --- --- ---
10–14.9 72 (20.6) --- 434 (19.7) --- --- --- ---
≥ 15 174 (49.9) --- 435 (19.8) --- --- --- ---
Barthel score (mean, SD) 83.3 (23.9) --- --- --- --- --- ---
Mortality (N, %) 144 (41.3) 73 (22.5) 11272 (53.6) 470 (18.8) 2548 (10.5)2 6477 (12.3) 375 (17.1)
Unplanned dialysis start ESKD 89 (25.5) CKD 196 (60%) --- 859 (34.4%) 31% --- Excluded AKI
Acute on Chronic 108(33%)
AKI 75 (21.5)
AKI 21 (7%) excluded potentially reversible AKI
Acute on Chronic 185 (53.0)
Hospitalization at dialysis start 271 (77.6) --- --- --- --- No of hospitalizations and total hospital days in the prior six months Hospitalization in the prior 6 months
No 1,242 (56.5)
Yes 957 (43.5)
RRT modality n (%) HD 99% --- HD 20283 (96.4) --- --- 50568 HD 95.8% 1,881 (85.5) HD;
PD 3 (0.9)
PD 759 (3.6) 318 (14.5) PD
Vascular access Catheter 199 (75.1) --- --- --- --- Catheter 31970 (60.6%) ---
Fistula 66 (24.9)
Graft 5 (1.9)
PD cath 3 (0.8)
Other 1 (0.3)
Country USA Canada Taiwan France France USA Canada
3 and 6 months mortality 142 (40.2%) 73 (22.4%) --- 19% 10.5% 12/3% 375 (17.1%)
--- 20.3%

Abbreviations: NH, Nursing Home; CHF, Congestive Heart Failure; CAD/ASHD, Coronary Artery Disease/Atherosclerotic Heart Disease; CVA/TIA, Cerebro Vascular Accident/Transient Ischemic Attack; PVD, Peripheral Vascular Disease; COPD, Chronic Obstructive Pulmonary Disease.

1. Patient demographics are based on training data.

2. Overall mortality reported for both training and validation data sets, N = 24348.

3. Frequency of those with albumin < 3 g/dl.

4. Calculated; results were reported separately for survival groups.

5. Presumed mostly Asian.

Primary outcome

Primary outcomes were index discrimination as measured by the c-statistic or the area under the receiver operating characteristics curve (ROC); calibration as measured by the Hosmer-Lemeshow; goodness of fit statistic and calibration curves; and positive and negative predictive value to predict 3- and 6-month all-cause mortality.

Independent variables

Data on patient demographics (sex, marital status, and living arrangement), comorbidities, context, and survival was extracted from the EHR by a college student supervised by an internist and nephrologist (BT, LJH). Living arrangement was classified as independent and assisted living and nursing home (NH). Comorbidities extracted manually from past medical history were supplemented with a validated electronic search from the EHR that was then used to calculate the Charlson Comorbidity Index (CCI) [30]. Functional status for hospitalized patients was based on the Barthel’s index was calculated by a validated electronic search pulling information from nursing assessment for hospitalized patients [31]. For patients without a hospitalization, we used patient provided information (PPI) of functional status obtained from an annual questionnaire completed by patients as part of routine care in the outpatient setting (S1 Table). Baseline data were collected on the closest available data prior to dialysis extending back up to 30 days for laboratory values, 1 year for outpatient functional status and 2 years for comorbidities. Laboratory results for hemoglobin, creatinine, CRP, phosphorous and albumin were pulled from the EHR. GFR was calculated using the CKD-EPI equation [32]. Mortality and death dates were identified by an EHR review through December 27, 2013 and were supplemented with online queries for publicly available death certificates and obituaries for each individual patient based on name and date of birth.

Statistical analysis

We compare and contrast descriptive statistics of the study cohort to those used by each of the prognostic indicator development study, with the exception of NCI for which we used data from a validation cohort in a study focused on elderly incident RRT patients [28]. Data for all variables used in the prognostic indices are presented as means and standard deviations for continuous variables, and counts and frequencies for categorical variables.

A score for each patient for each of the six prognostic instruments was calculated based on original model parameters specified in their respective development papers. Categorization into high and low risk groups also followed the classifications the original papers. A separate logistic regression model was run for each of the indices to predict death at 3 and/or 6 months post RRT initiation using the prognostic score as the independent variable. Indices were compared using the concordance (“c”)-statistic, corresponding to the ROC; higher c-statistic indicates a better preforming model. Sensitivity, specificity, positive and negative predictive values, and positive and negative likelihood ratios were also calculated. We created calibration plots to evaluate predicted probability of death vs. true observed mortality rate (true probability) in R using the “Presence-Absence” package. A Hosmer-Lemeshow goodness of fit test was performed for each index to assess whether differences between the observed and expected proportions of the outcome were significant, indicating poor model fit. The investigators and analysts were not blinded to the, tools, predictors or outcome.

Missing data

Complete data was available to implement three of the six indices (Foley, NCI and Wick). For the remaining three indices (REIN, Updated REIN, Thamer) almost 52% of patients were missing at least one variable, ranging from 3% missing the Barthel score to 38% missing the BMI. For missing BMI, albumin, and Barthel score data, we first tested the assumption that variables were missing at random (by testing for collinearity and interaction with other variables) and then imputed by means of multiple imputation using chained equations (10 replications) in STATA. Prognostic scores were generated for each imputed data set separately and averaged over the fitted indices. Analysis was preformed using STATAMP version 15.1 (StataCorp, LP), and R 3.4.2.

Results

The patient population of 349 older adults initiating RRT was, on average, 81.5±4.4 years old, 66% were male, 94.6% were non-Hispanic white (Fig 1, Table 1). This cohort was smaller and older than most of the studies and most comparable to the REIN cohorts in terms of age and functional status. The overall burden of comorbidity was high, with coronary artery disease (CAD), chronic heart failure (CHF), and diabetes being the most common. Median survival was 351 days with 132 patients dying before 90 days (37.8%) and 142 (40.6%) before 6 months. Sixty patients (17%) recovered renal function and discontinued RRT during the follow up, they were not censored as our interest was in overall survival. Functional status was similar between patients who started inpatient (Barthel score 83.6 +/- 22.3) vs. outpatient (84.5 +/- 22.2).

Fig 1. Flowchart of cohort development.

Fig 1

With the different indices of interest using different variables and predicting different levels of risk, the resulting risk stratification of our cohort varied depending on which index was used (Fig 2, Table 2). The “high risk” designation was assigned by 22.6% of our cohort when the Foley index was used, compared to 0.9% of the cohort with the Thamer index. This was not necessarily consistent with the predicted mortality threshold corresponding to “high risk” of death, since “high risk” in the Foley index corresponds to 90–100% 6-months mortality, whereas it is >55% 6-months mortality for the Thamer index (Table 2).

Fig 2. Percent of patients with each risk score value, by index.

Fig 2

Table 2. Breakdown of cohort into predicted risk categories1 by index, actual and predicted mortality (%) at 3 months and 6 months after dialysis initiation by risk score.

Index Breakdown of MCDS cohort N (%) Score Points Predicted 3 mo. mortality Actual 3 mo. mortality Predicted 6 mo. mortality Actual 6 mo. mortality
Foley
79 (22.6) High ≥9 --- 55.7 90–100% 59.5
188 (53.9) Moderate 5–8 --- 39.4 33–47% 43.6
82 (23.5) Low <5 --- 17.1 4% 18.3
NCI
27 (7.7) High ≥10 --- 44.4 23.7–38.4% 48.2
165 (47.3) Moderate 4–9 --- 47.9 11.4–32.3% 50.3
157 (45.0) Low <4 --- 26.1 6.5–30.6% 30.6
REIN
18 (5.2) High ≥9 --- 44.4 25% 55.6
161 (46.1) Moderate 5–8 --- 46.0 9–15% 49.1
170 (48.7) Low <5 --- 29.4 3% 32.4
Updated REIN1
34 (9.7) High ≥17 > 40% 41.2 --- 47.1
187 (53.6) Moderate 12–16 20–40% 44.4 --- 47.6
128 (36.7) Low <12 < 20% 27.3 --- 30.5
Thamer
3 (0.9) High ≥8 39% 100.0 > 55% 100.0
116 (33.2) Moderate 5–7 22–34% 43.1 35–49% 46.6
230 (65.9) Low <5 2–17% 34.4 4–27% 37.8
Wick
31 (8.9) High ≥10 --- 67.6 > 50% 72.0
224 (64.2) Moderate 4–9 --- 46.0 25–50% 48.2
94 (26.9) Low <4 --- 8.5 < 25% 14.9

1. As defined by original paper for each index, if there were more than 3 categories defined in the paper we took the lowest and highest categories and collapsed the other categories into moderate.

None of the indices performed well in our index with only Wick having ROC >0.7, at 0.73 (95% CI: 0.68, 0.78). A comparison of ROCs across all 6 indices indicated that they did not substantially differ in their predictive ability (Table 3, Fig 3). Predicted mortality for four (REIN, NCI, Wick, and Thamer) underestimated mortality for the highest risk group, while Foley markedly overestimated it (Table 2). Table 3 shows positive and negative likelihood ratios with Thamer, Wick, and Foley indices performing best.

Table 3. Discrimination, calibration and predictive values.

Index Discrimination Area Under the Curve Calibration HL-goodness of fit PPV for high risk score Likelihood ratio + for high risk predicted to die NVP for low risk score Likelihood ratio–for low risk predicted to live
Foley 0.67 (0.61, 0.73) 0.004 ≥9 +2.09 81.7% -0.32
59.5%
NCI 0.63 (0.58, 0.69) 0.23 ≥10 +1.32 .% -0.43
51.7%
REIN 0.61 (0.55, 0.67) 0.45 >9 +1.78 100% -0.54
49.7
Updated REIN 0.62 (0.56, 0.68) 0.03 ≥17 +1.27 66.7% -0.62
41.9%
Thamer 0.57 (0.51, 0.63) 0.43 ≥8(≥7) +2.44 100% -0.32
42.8%
Wick 0.73 (0.68, 0.78) 0.70 >12 +2.14 85.1% -0.25
62.4%

(HL–Hozmer- Lemeshow goodness of fit).

PPV—positive predictive value for highest risk group (expected to die).

NPV–negative predictive value for mortality and lowest risk group (expected to survive).

Fig 3. Receiver operating characteristics (ROC) curves for each index.

Fig 3

Calibration plots for each of the indices are shown in Fig 4. For the two indices predicting 3-month mortality (Updated REIN and Thamer), 3-month predictions were slightly better calibrated than their 6-month counterparts. Of the two indices with highest discrimination, the Foley index was weakly calibrated with poor overall model fit (p <0.01), while the Wick index was relatively well-calibrated.

Fig 4. Calibration plots by index.

Fig 4

a. Mortality at 3 months. b. Mortality at 6 months.

Using the pre-specified cutoffs for “high risk” defined by each index, the PPV for mortality in the high risk group ranged from 41.9% to 62.4% (Wick performed the best), and NPV ranged from 0–100% (REIN and Thamer performed the best).

To improve the performance of these indices, we identified different risk thresholds for each index that would be optimized for our patient population. The following cutoff scores yielded a specificity of >50% and >90%, respectively, in predicting mortality: Foley 7 and 10, NCI 4 and 10, REIN 4.2 and 8.2, updated REIN 12.1 and 16.4, Thamer 4.2 and 6.5, Wick 6 and 10.

Discussion

Prognostic information is desired by patients and can facilitate and improve shared decision making [9, 33]. We tested six indices predicting short-term (3- or 6-month) mortality at the start of RRT [16]. Their performance in our population-based cohort of elderly incident RRT patients was variable. The discrimination, which reflects the probability that a randomly selected patient who died had a higher risk score than a patient did not die, was poor for all indices except for Wick, which had good discrimination ROC 0.73. Calibration, i.e. the agreement between observed and expected (i.e. predicted) outcomes, was acceptable only for the Wick and Thamer indices. All of the indices fell short in their ability to predict death for the highest risk group. Most concerning was the low positive and high negative predictive values of all the prognostic indicators in the highest risk patient subgroups, as this may lead patients and clinicians to forego life-sustaining treatment due to underestimation of life expectancy and potential benefit. The indices performed considerably better in predicting survival for the lowest risk patients. Thus, they may be more helpful to promote optimism and treatment options such as dialysis and kidney transplant for patients with reasonably good chances of survival.

The indices that performed best in our elderly cohort included functional status and hospitalizations in the last 6 months, as well as proxy variables suggestive of unplanned dialysis start, all three are important markers of poor health or sentinel events [3437]. The other indices variably included similar variables but not all three. While disappointing, the c-statistics for the different indices in our validation study are similar to those reported in multiple other validation studies summarized in our recent systematic review and thus can also be seen to show reasonable reproducibility of the initial studies [16]. It is not unusual for prognostic indices to perform worse in a new population than in the development cohorts and our findings again demonstrate how difficult it is to develop completely accurate and reliable models that are generalizable to different settings of a heterogeneous patient population. When the Foley index was initially validated it did poorly, the discrimination of the REIN index ranged from 0.68–0.74 in the initial development and validation study and has varied from 0.66–0.70 in external validation studies and external validations of the NCI from 0.60–0.91 [16, 18, 19, 22, 24, 28, 29, 38]. Our findings are however lower than those reported by Ramspek et al. [39] in a recent validation study. Their study looked at 1 year prognosis and thus included a different set of prognostic indices with the Foley index being the only one included in both studies. We were unable to include the two best performing indices in the Ramspek study because they included variables not available at dialysis start including dialysis adequacy and treatment modality after 3 months on dialysis [25, 26]. In addition to their strength of size and generalizability of a population based cohort, the difference in discrimination may also tie to the fact that we looked at mortality from the day of RRT initiation whereas they gathered baseline data and started the prediction validation at day 90 of RRT. Thus our mortality rate was significantly higher than the other studies as well as the mortality in our population when limited to patients who survive the initial 30 days of HD [40]. While this has long been customary for studies on ESKD to ensure that patients do in fact have ESKD as opposed to acute kidney injury, we feel this fails to help patients and their clinicians make decisions at the time of dialysis initiation and fails to account for the high early mortality [5].

The lack of generalizability of the examined indices likely stem from the varied populations in which these indices were developed and differences in predictive variables chosen and may reflect overfitting to the development populations. Our population differed by representing a narrower age range with a higher mortality rate than reported in most of the development studies. If age were appropriately factored into the models however, then applying their weights should yield accurate results. Also a well calibrated index should be able to perform in new populations with higher and lower mortality rates than the original development populations. We acknowledge that the small size of our cohort contributes to the poor fit of the indices, but is representative of the difficulties likely faced by other health care organizations with a limited number of patients with incident ESRD. The event rate for our primary outcome of 6 month mortality was approximately 40%; thus, we were sufficiently powered to assess all of the indices.

Moreover, our cohort is limited by its small size, the racial homogeneity of our cohort as mostly white also contrasts with the general US ESKD population but it is unclear how it compares to the populations used in most previous development and validation studies that often did not report on race [16]. Another limitation is the use of secondary EHR data which is only as good as the initial documentation allows. We did supplement manual extraction with validated algorithms for data extraction for important variables as well as imputation for key missing variables necessary for the construction of the index scores. When imputing we did make sure that our data suggested that they were missing at random. We did use different methods to assess functional status for inpatients (nursing assessment) vs. outpatient (patient survey) however the average values for those two methods were similar. We did not censor our cohort at the time of renal recovery which was similar to that previously reported in our practice [41]. Since we were not directly estimating survival but rather testing the tools accuracy for predicting death at a certain time point the effect of this should be negligible. Finally our study was limited to a single network and local practice patterns could have introduced some bias. Nonetheless, we closely adhered to the CHARMS recommendations for prognostic validation studies and manual data abstraction from a narrative medical record to supplement electronic pulls of secondary data. Our study adds to the small number of studies assessing prognostic index performance in elderly dialysis patients [18, 19, 42] and also serves as the first external validation of three of the included indices (Wick, Thamer and updated REIN) [19, 24, 29].

Discussion about prognosis and goals of care are especially poignant and relevant for older dialysis patients. The uptake of prognostic indices into clinical practice has been poor with most patients reporting having had no discussions about prognosis at dialysis start [6, 43]. Even for tools that are frequently used in clinical settings (i.e. APACHE III in the ICU) concerns about the ability of prognostic tools to predict accurately for an individual patient lead to a lack of bedside discussions. In qualitative studies, clinicians have expressed skepticism regarding the reliability and accuracy of available tools [9]. Our study confirms that they are justified in their concern. Discrimination between 0.70–0.73 is not sufficient to support high stakes decisions advising on whether to initiate or defer life-sustaining dialysis treatment. Another concern is the wide variation in the gradient of risk (i.e. the percent expected mortality deemed to be “high” by each model), which hinders their interpretability and clinical utility to patients, caregivers, and clinicians. The low positive predictive value for death noted for all the indices was particularly concerning. In fact many of the indices paradoxically had a higher negative than positive predictive value for the highest risk category, a function of the fact that the mortality risk in the highest risk groups in the development cohorts was lower than 50% for many of the indices. The utility of such predictions at the bedside to aid treatment choice thus is questionable, especially when coupled with the absence of being able to predict patient important outcomes for the alternative of no intervention.

Understanding if certain risk thresholds are more or less meaningful to patients and clinicians and how they influence treatment has not been well studied. Furthermore the importance of precision to clinicians and patients in this context also remains unclear.

Even if prognostic indices may not perform well enough on an individual level they may still be acceptable for use on a population level in shaping policy. In particular Medicare coverage in the U.S. limits patients to coverage of either dialysis or hospice, not both as dialysis is considered a life extending treatment. Patients are eligible for the Medicare Hospice benefit if they are deemed more likely than not to die in the next 6 months. The Thamer, Wick and Foley predict more than 50% risk of death within the next 6 months for patients in their highest risk categories. This can support arguments for dual coverage of hospice and dialysis in this high risk group, which in turn could help high risk dialysis patients avoid aggressive and costly treatments that they typically are subject to at the end of life [12, 13].

Developing a more accurate, reliable and generalizable mortality prediction model for older adults facing the decision of whether or not to initiate dialysis may require larger multi-center studies and consideration of a wider array of risk factors including cognitive and functional status, frailty, and social determinants of health [35, 36, 4447]. Additionally, advanced analytic methods such as machine learning and artificial intelligence, may help identify highest risk patients and facilitate generalizable self-learning models that adapt to each population and setting [48].

Conclusion

None of the indices performed well in predicting early mortality for the highest risk group in our cohort of elderly incident dialysis patients. The Wick index performed best in terms of discrimination with two other indices, Thamer and Foley having acceptable performance. The future will tell if big data and artificial intelligence can develop more accurate prediction tools but more importantly, better understanding of the role of prognosis at the bedside is needed to promote shared decision making.

Supporting information

S1 Checklist. TRIPOD statement.

(DOCX)

S1 Table. Variables used to construct Barthel score.

(DOCX)

S2 Table. Variables used in current study to construct risk scores.

(DOCX)

Data Availability

The deidentified data underlying this study is available at Harvard Dataverse: https://doi.org/10.7910/DVN/KZ8YEL.v

Funding Statement

This publication was supported by the Mayo Clinic, Robert D and Patricia E. Center for the Science of Health Care Delivery (B.T., R.H., R.G.M, L.J.H), by the Extramural Grant Program (EGP) by Satellite Healthcare, a not-for-profit renal care provider (L.J.H., B.T.), and by the National Institute of Health (NIH) National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) grant K23 DK109134 (L.J.H.) K23 DK114497 (RGM) and the National Institute on Aging grant K23 AG051679 (B.T.). Additional support was provided by the National Center for Advancing Translational Sciences (NCATS) grant UL1 TR000135. Dr. Shah has received research support through Mayo Clinic from the Food and Drug Administration to establish Yale-Mayo Clinic Center for Excellence in Regulatory Science and Innovation (CERSI) program (U01FD005938); from the Centers of Medicare and Medicaid Innovation under the Transforming Clinical Practice Initiative (TCPI); from the Agency for Healthcare Research and Quality (R01HS025164, R01HS025402, R03HS025517); from the National Heart, Lung and Blood Institute of the National Institutes of Health (NIH; R56HL130496, R01HL131535), National Science Foundation; and from the Patient Centered Outcomes Research Institute (PCORI) to develop a Clinical Data Research Network (LHSNet). Dr.Tangri reports grants and personal fees from AstraZeneca Inc., personal fees from Otsuka Inc., personal fees from Janssen, personal fees from Boehringer Ingelheim and Eli Lilly, grants, and personal fees, and other from Tricida Inc., outside the submitted work. Study contents are the sole responsibility of the authors and do not necessarily represent the official views of NIH. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

References

  • 1.Moss AH. Shared Decision-Making in the Appropriate Initiation of and Withdrawal from Dialysis. Clinical Practice Guideline. Rockville, MD: Renal Physicians Association; 2010. [Google Scholar]
  • 2.Michel DM, Moss AH. Communicating prognosis in the dialysis consent process: A patient-centered, guideline-supported approach. Advances in Chronic Kidney Disease. 2005;12(2):196–201. 10.1053/j.ackd.2005.01.003 [DOI] [PubMed] [Google Scholar]
  • 3.Vandecasteele SJ, Kurella Tamura M. A Patient-Centered Vision of Care for ESRD: Dialysis as a Bridging Treatment or as a Final Destination? Journal of the American Society of Nephrology. 2014;25(8):1647–51. 10.1681/ASN.2013101082 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.O'Hare AM, Armistead N, Schrag WL, Diamond L, Moss AH. Patient-Centered Care: An Opportunity to Accomplish the "Three Aims" of the National Quality Strategy in the Medicare ESRD Program. Clin J Am Soc Nephrol. 2014;9(12):2189–94. 10.2215/CJN.01930214 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Wachterman MW, O’Hare AM, Rahman O-K, Lorenz KA, Marcantonio ER, Alicante GK, et al. One-Year Mortality After Dialysis Initiation Among Older AdultsOne-Year Mortality After Dialysis Initiation Among Older AdultsLetters. 2019. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.Wachterman MW, Marcantonio ER, Davis RB, Cohen RA, Waikar SS, Phillips RS, et al. Relationship between the prognostic expectations of seriously ill patients undergoing hemodialysis and their nephrologists. JAMA Internal Medicine. 2013;173(13):1206–14. 10.1001/jamainternmed.2013.6036 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Combs SA, Culp S, Matlock DD, Kutner JS, Holley JL, Moss AH. Update on end-of-life care training during nephrology fellowship: a cross-sectional national survey of fellows. Am J Kidney Dis. 2015;65(2):233–9. 10.1053/j.ajkd.2014.07.018 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.Davison SN, Jhangri GS, Holley JL, Moss AH. Nephrologists' reported preparedness for end-of-life decision-making. Clin J Am Soc Nephrol. 2006;1(6):1256–62. 10.2215/CJN.02040606 [DOI] [PubMed] [Google Scholar]
  • 9.Schell JO, Patel UD, Steinhauser KE, Ammarell N, Tulsky JA. Discussions of the Kidney Disease Trajectory by Elderly Patients and Nephrologists: A Qualitative Study. American Journal of Kidney Diseases. 2012;59(4):495–503. 10.1053/j.ajkd.2011.11.023 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 10.Thorsteinsdottir B, Swetz KM, Albright RC. The Ethics of Chronic Dialysis for the Older Patient: Time to Reevaluate the Norms. Clin J Am Soc Nephrol. 2015;10(11):2094–9. 10.2215/CJN.09761014 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 11.Russ AJ, Kaufman SR. Discernment rather than decision-making among elderly dialysis patients. Semin Dial. 2012;25(1):31–2. 10.1111/j.1525-139X.2011.01047.x [DOI] [PubMed] [Google Scholar]
  • 12.Wong SP, Kreuter W, O'Hare AM. Treatment intensity at the end of life in older adults receiving long-term dialysis. Arch Intern Med. 2012;172(8):661–3. 10.1001/archinternmed.2012.268 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 13.System USRD. USRDS 2016 Annual Data Report: Atlas of End-Stage Renal Disease in the United States Bethesda MD: National Institutes of Health, National Institute of Diabetes and Digestive and Kidney Diseases; 2016. [Google Scholar]
  • 14.Murtagh FEM, Addington-Hall J, Higginson IJ. The Prevalence of Symptoms in End-Stage Renal Disease: A Systematic Review. Adv Chronic Kidney Dis. 2007;14(1):82–99. 10.1053/j.ackd.2006.10.001 [DOI] [PubMed] [Google Scholar]
  • 15.Chen JC, Thorsteinsdottir B, Vaughan LE, Feely MA, Albright RC, Onuigbo M, et al. End of Life, Withdrawal, and Palliative Care Utilization among Patients Receiving Maintenance Hemodialysis Therapy. Clin J Am Soc Nephrol. 2018;13(8):1172–9. 10.2215/CJN.00590118 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Anderson RT, Cleek H, Pajouhi AS, Bellolio MF, Mayukha A, Hart A, et al. Prediction of Risk of Death for Patients Starting Dialysis: A Systematic Review and Meta-Analysis. Clin J Am Soc Nephrol. 2019;14(8):1213–27. 10.2215/CJN.00050119 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Cohen LM, Ruthazer R, Moss AH, Germain MJ. Predicting six-month mortality for patients who are on maintenance hemodialysis. Clin J Am Soc Nephrol. 2010;5(1):72–9. 10.2215/CJN.03860609 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Couchoud C, Labeeuw M, Moranne O, Allot V, Esnault V, Frimat L, et al. A clinical score to predict 6-month prognosis in elderly patients starting dialysis for end-stage renal disease. Nephrol Dial Transplant. 2009;24(5):1553–61. 10.1093/ndt/gfn698 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Couchoud CG, Beuscart JBR, Aldigier JC, Brunet PJ, Moranne OP, Registry R. Development of a risk stratification algorithm to improve patient-centered care and decision making for incident elderly patients with end-stage renal disease. Kidney International. 2015;88(5):1178–86. 10.1038/ki.2015.245 [DOI] [PubMed] [Google Scholar]
  • 20.Khan IH, Campbell MK, Cantarovich D, Catto GR, Delcroix C, Edward N, et al. Comparing outcomes in renal replacement therapy: How should we correct for case mix? American Journal of Kidney Diseases. 1998;31(3):473–8. 10.1053/ajkd.1998.v31.pm9506684 [DOI] [PubMed] [Google Scholar]
  • 21.Khan IH, Catto GR, Edward N, Fleming LW, Henderson IS, MacLeod AM. Influence of coexisting disease on survival on renal-replacement therapy. Lancet. 1993;341(8842):415–8. 10.1016/0140-6736(93)93003-j [DOI] [PubMed] [Google Scholar]
  • 22.Foley RN, Parfrey PS, Hefferton D, Singh I, Simms A, Barrett BJ. Advance prediction of early death in patients starting maintenance dialysis. American Journal of Kidney Diseases. 1994;23(6):836–45. 10.1016/s0272-6386(12)80137-5 [DOI] [PubMed] [Google Scholar]
  • 23.Liu J, Huang Z, Gilbertson DT, Foley RN, Collins AJ. An improved comorbidity index for outcome analyses among dialysis patients. Kidney Int. 2010;77(2):141–51. 10.1038/ki.2009.413 [DOI] [PubMed] [Google Scholar]
  • 24.Wick JP, Turin TC, Faris PD, MacRae JM, Weaver RG, Tonelli M, et al. A Clinical Risk Prediction Tool for 6-Month Mortality After Dialysis Initiation Among Older Adults. American Journal of Kidney Diseases. 2016;30 10.1053/j.ajkd.2016.11.008 [DOI] [PubMed] [Google Scholar]
  • 25.Wagner M, Ansell D, Kent DM, Griffith JL, Naimark D, Wanner C, et al. Predicting mortality in incident dialysis patients: an analysis of the United Kingdom Renal Registry. American journal of kidney diseases: the official journal of the National Kidney Foundation. 2011;57(6):894–902. 10.1053/j.ajkd.2010.12.023 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 26.Floege J, Gillespie IA, Kronenberg F, Anker SD, Gioni I, Richards S, et al. Development and validation of a predictive mortality risk score from a European hemodialysis cohort. Kidney International. 2015;87(5):996–1008. 10.1038/ki.2014.419 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 27.Collins GS, Reitsma JB, Altman DG, Moons KG. Transparent Reporting of a multivariable prediction model for Individual Prognosis or Diagnosis (TRIPOD): the TRIPOD statement. Annals of internal medicine. 2015;162(1):55–63. 10.7326/M14-0697 [DOI] [PubMed] [Google Scholar]
  • 28.Kan WC, Wang JJ, Wang SY, Sun YM, Hung CY, Chu CC, et al. The new comorbidity index for predicting survival in elderly dialysis patients: a long-term population-based study. PLoS ONE. 2013;8(8):e68748 10.1371/journal.pone.0068748 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 29.Thamer M, Kaufman JS, Zhang Y, Zhang Q, Cotter DJ, Bang H. Predicting Early Death Among Elderly Dialysis Patients: Development and Validation of a Risk Score to Assist Shared Decision Making for Dialysis Initiation. American Journal of Kidney Diseases. 2015;66(6):1024–32. 10.1053/j.ajkd.2015.05.014 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 30.Charlson ME, Pompei P, Ales KL, MacKenzie CR. A new method of classifying prognostic comorbidity in longitudinal studies: development and validation. J Chronic Dis. 1987;40(5):373–83. 10.1016/0021-9681(87)90171-8 [DOI] [PubMed] [Google Scholar]
  • 31.Biehl M, Li G, Reriani M, Ahmed A, Smairat R, Wilson G, et al. , editors. Feasibility of barthel index collected through electronic medical record (EMR) as long-term assessment of functional status in critically ill survivors Critical Care Medicine; 2010: Lippincott Williams & Wilkins 530 Walnut St, Philadelphia, PA: 19106–3621 USA. [Google Scholar]
  • 32.Levey AS, Stevens LA, Schmid CH, Zhang YL, Castro AF, 3rd, Feldman HI, et al. A new equation to estimate glomerular filtration rate. Annals of internal medicine. 2009;150(9):604–12. 10.7326/0003-4819-150-9-200905050-00006 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 33.Stacey D, Légaré F, Lewis K, Barry MJ, Bennett CL, Eden KB, et al. Decision aids for people facing health treatment or screening decisions. Cochrane Database of Systematic Reviews. 2017(4). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 34.Fitzpatrick J, Sozio SM, Jaar BG, Estrella MM, Segev DL, Parekh RS, et al. Frailty, body composition and the risk of mortality in incident hemodialysis patients: the Predictors of Arrhythmic and Cardiovascular Risk in End Stage Renal Disease study. Nephrology Dialysis Transplantation. 2018;34(2):346–54. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 35.Johansen KL, Chertow GM, Jin C, Kutner NG. Significance of Frailty among Dialysis Patients. Journal of the American Society of Nephrology. 2007;18(11):2960–7. 10.1681/ASN.2007020221 [DOI] [PubMed] [Google Scholar]
  • 36.Wong SP, Kreuter W, O'Hare AM. Healthcare intensity at initiation of chronic dialysis among older adults. J Am Soc Nephrol. 2014;25(1):143–9. 10.1681/ASN.2013050491 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 37.Crane SJ, Tung EE, Hanson GJ, Cha S, Chaudhry R, Takahashi PY. Use of an electronic administrative database to identify older community dwelling adults at high-risk for hospitalization or emergency department visits: the elders risk assessment index. BMC Health Serv Res. 2010;10:338 10.1186/1472-6963-10-338 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 38.Barrett BJ, Parfrey PS, Morgan J, Barre P, Fine A, Goldstein MB, et al. Prediction of early death in end-stage renal disease patients starting dialysis. Am J Kidney Dis. 1997;29(2):214–22. 10.1016/s0272-6386(97)90032-9 [DOI] [PubMed] [Google Scholar]
  • 39.Ramspek CL, Voskamp PW, van Ittersum FJ, Krediet RT, Dekker FW, van Diepen M. Prediction models for the mortality risk in chronic dialysis patients: a systematic review and independent external validation study. Clin Epidemiol. 2017;9:451–64. 10.2147/CLEP.S139748 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 40.Hickson LJ, Negrotto SM, Onuigbo M, Scott CG, Rule AD, Norby SM, et al. Echocardiography Criteria for Structural Heart Disease in Patients With End-Stage Renal Disease Initiating Hemodialysis. Journal of the American College of Cardiology. 2016;67(10):1173–82. 10.1016/j.jacc.2015.12.052 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 41.Hickson LJ, Chaudhary S, Williams AW, Dillon JJ, Norby SM, Gregoire JR, et al. Predictors of outpatient kidney function recovery among patients who initiate hemodialysis in the hospital. Am J Kidney Dis. 2015;65(4):592–602. 10.1053/j.ajkd.2014.10.015 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 42.Cheung KL, Montez-Rath ME, Chertow GM, Winkelmayer WC, Periyakoil VS, Kurella Tamura M. Prognostic stratification in older adults commencing dialysis. J Gerontol A Biol Sci Med Sci. 2014;69(8):1033–9. 10.1093/gerona/glt289 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Davison SN. End-of-life care preferences and needs: perceptions of patients with chronic kidney disease. Clin J Am Soc Nephrol. 2010;5(2):195–204. 10.2215/CJN.05960809 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44.McAdams-DeMarco MA, Daubresse M, Bae S, Gross AL, Carlson MC, Segev DL. Dementia, Alzheimer’s Disease, and Mortality after Hemodialysis Initiation. Clinical Journal of the American Society of Nephrology. 2018;13(9):1339–47. 10.2215/CJN.10150917 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.Nicholas SB, Kalantar-Zadeh K, Norris KC. Socioeconomic disparities in chronic kidney disease. Advances in chronic kidney disease. 2015;22(1):6–15. 10.1053/j.ackd.2014.07.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 46.Morton RL, Schlackow I, Mihaylova B, Staplin ND, Gray A, Cass A. The impact of social disadvantage in moderate-to-severe chronic kidney disease: an equity-focused systematic review. Nephrol Dial Transplant. 2016;31(1):46–56. 10.1093/ndt/gfu394 [DOI] [PubMed] [Google Scholar]
  • 47.Norton JM, Moxey-Mims MM, Eggers PW, Narva AS, Star RA, Kimmel PL, et al. Social Determinants of Racial Disparities in CKD. Journal of the American Society of Nephrology: JASN. 2016;27(9):2576–95. 10.1681/ASN.2016010027 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 48.Weng SF, Vaz L, Qureshi N, Kai J. Prediction of premature all-cause mortality: A prospective general population cohort study comparing machine-learning and standard epidemiological approaches. PLoS ONE. 2019;14(3):e0214365 10.1371/journal.pone.0214365 [DOI] [PMC free article] [PubMed] [Google Scholar]

Decision Letter 0

Davide Bolignano

4 May 2020

PONE-D-20-03399

Validation of prognostic indices for short term mortality in an incident dialysis population of older adults >75

PLOS ONE

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Reviewer #1: Partly

Reviewer #2: No

**********

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Reviewer #1: Yes

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Reviewer #2: No

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Reviewer #1: Overall, the paper is of interest, considering that there is still debate on the best outcome indicators to be used in clinical practice to assist the difficult decision of whether starting dialysis or not in the elderly.

Compared to other studies testing the role of outcome indicators, this cohort is relatively small. First, this limitation should be underlined more clearly in the abstract and in the text.

Second, given the small sample size, the cohort should be described more precisely (the cohort itself and the population from where the cohort is extracted.

- abstract and results: more information should be given on deaths and their cause and the time frame when they occurred. Moreover, it is of interest to know the mortality rate of the same period occurring in the prevalent population and in younger incident patients.

Introduction and methods: please better introduce and describe the existing prognostic indexes with their pro and contra.

Study-population: please better describe the Mayo Clinic Dialysis Service: how many centers? with which policies? with how many prevalent dialysis patients?

-Research authorisation: was this general or study specific?

-patients: please give information on first dialysis modality (haemodialysis vs peritoneal dialysis). Data are needed also on the first vascular access and on other lab variables (see comments to table1)

-Independent variables: first line there is an extra comma

-Independent variables:"living arrangement" please explain.

Comorbidities were extracted manually: by how many persons? Which was their definition?

-Functional status: this is a key point to be addressed and discussed. First, it was not collected homogeneously, but with two different modalities whether the patient is hospitalised or not. This is important, since by definition hospitalised patients may have a lower functional status. Second, no information is given on how many patients were hospitalised at dialysis start and during follow-up. Finally, the datum is missing nearly in 20% of the cohort. All these considerations need to be addressed considering that, as stated in the discussion, functional status is among the indexes that performed best in this cohort.

-GFR: this is another crucial point. The authors decided to use the Cockroft and Gault formula. The reason of that is to be given, since the most used GFR estimation is nowadays EPI-MDRD formula. Moreover, looking at table 1, half of the cohort had GFR higher or equal to 15 ml/min (i.e. it looks as they started dialysis at stage 4 CKD).

-Baseline data: when were they collected? at the first day of dialysis?

-BMI was missing in 38% of the cases. Please add in the analysis and table the patient body weight (which was used also for GFR estimation, anyway).

- Table 1: i suggest adding the following variables (if some are not available, please add it in the discussion section): Country, GFR estimated also with EPI MDRD, serum creatinine, body weight, vascular access, haemoglobin, CRP, serum phosphate, hospitalisation data, RRT modality. The cohort-specific variables can be added in separate table of "baseline data"

-Is there any information on patients stopping dialysis during the follow up? How were they considered in the analysis?

- A flow diagram describing the cohort should be added.

Reviewer #2: The authors are externally validating 6 new mortality indices (3 of them for the first time) in order to give tools to the clinicians and patients for decision making whether to start dialysis in over 75 year-old patients.

The topic is very interesting, however the main drawback of the study is that the authors did not report which are the characteristics of the indices used in the study and their algorithm (neither in the introduction or methods).

**********

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Reviewer #1: Yes: Lucia Del Vecchio

Reviewer #2: No

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PLoS One. 2021 Jan 20;16(1):e0244081. doi: 10.1371/journal.pone.0244081.r002

Author response to Decision Letter 0


30 Oct 2020

Re: Resubmission of

PONE-D-20-03399

Validation of prognostic indices for short term mortality in an incident dialysis population of older adults >75

PLOS ONE

Dear Dr. Davide Bolignano, MD, PhD

Academic Editor

PLOS ONE

We appreciate the review and opportunity to make our paper better for possible publication in

PLOS ONE. We have carefully addressed all of the reviewers comments as outlined below and evident in our marked up manuscript.

In addition we have formatted our paper to fit the PLOS ONE requirements and uploaded a dataset to Harvard Dataverse.

We do not believe that it is applicable to deposit our laboratory protocols as our research does not involve bench science and the limited standard laboratory results we report come from Mayo Clinic laboratories that are state of the art facilities. Please let us know if you feel differently.

If eligible I would like to opt in for making the peer review history publicly available if eligible.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. This has been done, although we were unable to find instructions about how to name the manuscript file. We have named picture and supplemental files as instructed.

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Please move this information to the Competing Interests section. This has been moved and authors asked to review the PLOS One competing interests and decide if there are other things they want to disclose.

Please confirm that this does not alter your adherence to all PLOS ONE policies on sharing data and materials, This has been done

Please include your updated Competing Interests statement in your cover letter; we will change the online submission form on your behalf. This has been added to the Cover letter and removed from the manuscript draft.

3. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information.

This has been done

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

We have prepared a de-identified dataset for sharing

Reviewer #1: No

Reviewer #2: No

Reviewer #1: Overall, the paper is of interest, considering that there is still debate on the best outcome indicators to be used in clinical practice to assist the difficult decision of whether starting dialysis or not in the elderly.

Compared to other studies testing the role of outcome indicators, this cohort is relatively small. First, this limitation should be underlined more clearly in the abstract and in the text.

This has been added to the limitations section in both the abstract and discussion

Second, given the small sample size, the cohort should be described more precisely (the cohort itself and the population from where the cohort is extracted.

We have described the cohort and created a flow chart for the cohort definition. We also cite studies reporting on a broader cohort from our practice.

- abstract and results: more information should be given on deaths and their cause and the time frame when they occurred.

We have reported our 3 and 6 month mortality both in the text and table 1, we do not have detailed cause of death for all of the cohort.

Moreover, it is of interest to know the mortality rate of the same period occurring in the prevalent population and in younger incident patients.

We have cited studies that report the mortality rate in our younger incident patients, although as reported in methods and discussion our study differs in taking into account also patients who die early from AKI.

Introduction and methods: please better introduce and describe the existing prognostic indexes with their pro and contra.

A description has been added to the methods section however it is too early to make judgement calls on the pro and contra of the different indices as this is part of the motivation for the study.

Study-population: please better describe the Mayo Clinic Dialysis Service: how many centers? with which policies? with how many prevalent dialysis patients?

This information has been added to the methods

-Research authorisation: was this general or study specific?

This has been clarified, the research authorization is general and signed by patients to authorize the use of their records for medical research as per MN law.

-patients: please give information on first dialysis modality (haemodialysis vs peritoneal dialysis). Data are needed also on the first vascular access and on other lab variables (see comments to table1)

These variables have been added where possible and in table 1

-Independent variables: first line there is an extra comma

This has been removed

-Independent variables:"living arrangement" please explain.

This has been added

Comorbidities were extracted manually: by how many persons? Which was their definition? This has been clarified

-Functional status: this is a key point to be addressed and discussed. First, it was not collected homogeneously, but with two different modalities whether the patient is hospitalised or not. This is important, since by definition hospitalised patients may have a lower functional status. Second, no information is given on how many patients were hospitalised at dialysis start and during follow-up. This has been added to table 1 and we did look at functional status for both groups and it was almost identical. In fact the hospital starters were younger and more likely to have AKI than the outpatient starter.s

Finally, the datum is missing nearly in 20% of the cohort. It is unclear as to what you are referring to here? Only 3% were missing functional status. Other variables with missing data needing imputation is outlined in the methods. Please clarify

All these considerations need to be addressed considering that, as stated in the discussion, functional status is among the indexes that performed best in this cohort.

-GFR: this is another crucial point. The authors decided to use the Cockroft and Gault formula. The reason of that is to be given, since the most used GFR estimation is nowadays EPI-MDRD formula. Moreover, looking at table 1, half of the cohort had GFR higher or equal to 15 ml/min (i.e. it looks as they started dialysis at stage 4 CKD).

I did ask the statistician to go back and look at the formula used to calculate the GFR and it was actually CKD-EPI and not the Cockcroft-Gault. This has now been corrected in the manuscript. A significant number of the patients were acute or acute on chronic kidney failure explaining the high baseline eGFR.

-Baseline data: when were they collected? at the first day of dialysis? This has been clarified

-BMI was missing in 38% of the cases. Please add in the analysis and table the patient body weight (which was used also for GFR estimation, anyway).

- Table 1: i suggest adding the following variables (if some are not available, please add it in the discussion section): Country, GFR estimated also with EPI MDRD, serum creatinine, body weight, vascular access, haemoglobin, CRP, serum phosphate, hospitalisation data, RRT modality. These have been added to table 1 except for CRP as this was available for so few people and not reported in other studies and RRT as this was not reported for any of the other studies, almost all our patients were HD and we did not record whether patients were initiated on IHD or CRRT.

The cohort-specific variables can be added in separate table of "baseline data"

-Is there any information on patients stopping dialysis during the follow up? How were they considered in the analysis?

We did not censor patients at the time of renal recovery or dialysis cessation. We added to the paper that 60 (17%) of patients stopped dialysis because of renal recovery – this is similar to the rates in our younger incident population as previously published. As mortality 6 months after dialysis initiation was our prognostic endpoint, patients were not censored at the time of dialysis discontinuation and this has been added. This is a valid point brought up by the reviewer, however in our view negligible as we are testing the tools accuracy not directly estimating survival. Censoring those patients isn’t accurate either since it’s a new state (post dialysis remission) and would need to be fully addressed by a multi-state model, which is beyond the scope of this paper.

- A flow diagram describing the cohort should be added.

This has been added as figure 1

Reviewer #2: The authors are externally validating 6 new mortality indices (3 of them for the first time) in order to give tools to the clinicians and patients for decision making whether to start dialysis in over 75 year-old patients.

The topic is very interesting, however the main drawback of the study is that the authors did not report which are the characteristics of the indices used in the study and their algorithm (neither in the introduction or methods).

We have included more information on the indices included and a reference to our systematic review that underlies our choice of indices.

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step.

We hope that you now consider our paper acceptable for publication in your respected journal and appreciate this opportunity to strengthen our paper.

Sincerely

Bjorg Thorsteinsdottir MD

Decision Letter 1

Davide Bolignano

3 Dec 2020

Validation of prognostic indices for short term mortality in an incident dialysis population of older adults >75

PONE-D-20-03399R1

Dear Dr. Thorsteinsdottir,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Acceptance letter

Davide Bolignano

23 Dec 2020

PONE-D-20-03399R1

Validation of prognostic indices for short term mortality in an incident dialysis population of older adults >75

Dear Dr. Thorsteinsdottir:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

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on behalf of

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Checklist. TRIPOD statement.

    (DOCX)

    S1 Table. Variables used to construct Barthel score.

    (DOCX)

    S2 Table. Variables used in current study to construct risk scores.

    (DOCX)

    Data Availability Statement

    The deidentified data underlying this study is available at Harvard Dataverse: https://doi.org/10.7910/DVN/KZ8YEL.v


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