Table 1.
Bifidobacterium (sub)species recognized as reference strains (type strains).
| Bifidobacterium Strains | Isolation | References |
|---|---|---|
| B. actinocoloniiforme DSM 22766 | Bumblebee digestive tract | [16] |
| B. adolescentis ATCC 15703 | Intestine of human adult | [17] |
| B. aemilianum XV10 | Carpenter bee digestive tract | [5] |
| B. aerophilum DSM 100689 | Feces of cotton-top tamarin | [18] |
| B. aesuclapii DSM 26737 | Feces of baby common marmoset | [19] |
| B. angulatum LMG 11039 | Feces of human | [20] |
| B. animalis subsp. animalis LMG 10508 | Feces of rat | [21] |
| B. animalis subsp. lactis DSM 10140 | Fermented milk | [22] |
| B. anseris LMG 30189 | Feces of domestic goose | [7] |
| B. apri DSM 100238 | Digestive tract of wild pig | [23] |
| B. aquikefiri LMG 28769 | Water kefir | [24] |
| B. asteroides LMG 10735 | Hindgut of honeybee | [25] |
| B. avesanii DSM 100685 | Feces of cotton-top tamarin | [18] |
| B. biavatii DSM 23969 | Feces of tamarin | [26] |
| B. bifidum LMG 11041 | Feces of breast-fed infant | [3] |
| B. bohemicum DSM22767 | Bumblebee digestive tract | [16] |
| B. bombi DSM 19703 | Bumblebee digestive tract | [27] |
| B. boum LMG 10736 | Rumen of bovine | [28] |
| B. breve LMG 13208 | Infant stool | [17] |
| B. callimiconis LMG 30938 | Feces of Goeldi’s marmoset | [6] |
| B. callitrichidarum DSM 103152 | Feces of emperor tamarin | [29] |
| B. callitrichos DSM 23973 | Feces of common marmoset | [26] |
| B. canis DSM105923 | Feces of dog | [10] |
| B. castoris LMG 30937 | Feces of beaver | [6] |
| B. catenulatum LMG 11043 | Adult intestine | [30] |
| B. catenulatum subsp. kashiwanohense DSM21854 | Infant feces | [31] |
| B. catulorum DSM103154 | Feces of common marmoset | [32] |
| B. cebidarum LMG31469 | Feces of golden-headed tamarin | [9] |
| B. choerinum LMG 10510 | Feces of piglet | [28] |
| B. commune LMG28292 | Bumblebee gut | [33] |
| B. coryneforme LMG 18911 | Hindgut of honeybee | [25] |
| B. criceti LMG 30188 | Feces of European hamster | [7] |
| B. crudilactis LMG 23609 | Raw cow milk | [34] |
| B. cuniculi LMG 10738 | Feces of rabbit | [28] |
| B. dentium LMG 11045 | Oral cavity | [30] |
| B. dolichotidis LMG 30941 | Feces of Patagonian mara | [6] |
| B. eulemuris DSM 100216 | Feces of black lemur | [35] |
| B. felsineum DSM103139 | Feces of cotton-top tamarin | [11] |
| B. gallicum LMG 11596 | Adult intestine | [36] |
| B. goeldii LMG 30939 | Feces of Goeldi’s marmoset | [6] |
| B. hapali DSM 100202 | Feces of baby common marmoset | [37] |
| B. imperatoris LMG 30297 | Feces of emperor tamarin | [7] |
| B. indicum LMG 11587 | Insect | [25] |
| B. italicum LMG 30187 | Feces of European rabbit | [7] |
| B. jacchi DSM 103362 | Feces of baby common marmoset | [38] |
| B. lemurum DSM 28807 | Feces of ring-tailed lemur | [39] |
| B. leontopitechi LMG 31471 | Feces of Goeldi’s monkey | [9] |
| B. longum subsp. infantis ATCC 15697 | Intestine of infant | [17] |
| B. longum subsp. longum LMG 13197 | Adult intestine | [17] |
| B. longum subsp. suis LMG 21814 | Feces of pig | [40] |
| B. magnum LMG 11591 | Feces of rabbit | [30] |
| B. margollesii LMG 30296 | Feces of pygmy marmoset | [7] |
| B. meryciucm LMG 11341 | Rumen of bovine | [41] |
| B. minimum LMG 11592 | Sewage | [42] |
| B. mongoliense DSM 21395 | Fermented mare’s milk | [43] |
| B. moukabalense DSM 27321 | Feces of gorilla | [44] |
| B. myosotis DSM 100196 | Feces of common marmoset | [37] |
| B. parmae LMG 30295 | Feces of pygmy marmoset | [7] |
| B. platyrrhinorum SMA15 | Feces of squirrel monkey | [45] |
| B. primatium DSM 100687 | Feces of cotton-top tamarin | [11] |
| B. pseudocatenulatum LMG 10505 | Infant feces | [28] |
| B. pseudolongum subsp. globosum LMG 11596 | Rumen of bovine | [46] |
| B. pseudolongum subsp. pseudolongum LMG 11571 | Feces of swine | [21] |
| B. psychraerophilum LMG 21775 | Caecum of pig | [47] |
| B. pullorum subsp. gallinarum LMG 11586 | Caecum of chicken | [48] |
| B. pullorum subsp. pullorum LMG 21816 | Feces of chicken | [8] |
| B. ramosum DSM 100688 | Feces of cotton-top tamarin | [18] |
| B. reuteri DSM 23975 | Feces of common marmoset | [26] |
| B. rousetti BCRC 81136 | Feces of Egyptian fruit bat | [49] |
| B. ruminantium LMG 21811 | Rumen of bovine | [41] |
| B. pullorum subsp. saeculare LMG 14934 | Feces of rabbit | [50] |
| B. saguini LMG 23967 | Feces of tamarin | [26] |
| B. saimiriisciurei SMA1 | Feces of squirrel monkey | [45] |
| B. saimirii LMG 30940 | Feces of Bolivian saimiri | [6] |
| B. scaligerum DSM 103140 | Feces of cotton-top tamarin | [11] |
| B. scardovii LMG 21589 | Blood | [51] |
| B. simiarum DSM 103153 | Feces of emperor tamarin | [11] |
| B. stellenboschense DSM 23968 | Feces of tamarin | [26] |
| B. subtile LMG 11597 | Sewage | [42] |
| B. porcinum LMG 21689 | Feces of piglet | [52] |
| B. thermacidophilum LMG 21395 | Anaerobic digester | [53] |
| B. termophilum JCM 7027 | Rumen of bovine | [21] |
| B. tibiigranuli LMG 31086 | Water kefir | [54] |
| B. tissieri DSM 100201 | Feces of baby common marmoset | [37] |
| B. tsurumiense JCM 13495 | Hamster dental plaque | [55] |
| B. vansinderenii LMG 30126 | Feces of emperor tamarin | [56] |
| B. vespertilionis DSM 106025 | Feces of Egyptian fruit bat | [49] |
| B. xylocopae DSM104955 | Carpenter bee digestive tract | [5] |