Table 5.
Biochemical information about proteins differentially expressed in the ileum of newborn piglets.
| Accession | Description | Gene Name | Protein Name | Fold Change | p-Value |
|---|---|---|---|---|---|
| Cellular apoptosis | |||||
| F4ZS19 | Phospholipid scramblase OS = Sus scrofa OX = 9823 GN = PLSCR1 PE = 2 SV = 1 − [F4ZS19_PIG] | PLSCR1 | Phospholipid scramblase | −0.81 | 0.0393 |
| F1RR64 | Endonuclease G OS = Sus scrofa OX = 9823 GN = ENDOG PE = 1 SV=1 − [F1RR64_PIG] | ENDOG | Endonuclease G | −0.63 | 0.0102 |
| F1S0V3 | Annexin OS = Sus scrofa OX = 9823 GN = ANXA6 PE = 1 SV=3 − [F1S0V3_PIG] | ANXA6 | Annexin | −0.54 | 0.0472 |
| A0A0B8RTB1 | Apoptosis antagonizing transcription factor OS = Sus scrofa domesticus OX = 9825 GN = AATF PE = 4 SV = 1 − [A0A0B8RTB1_PIG] | AATF | Apoptosis antagonizing transcription factor | −0.82 | 0.0436 |
| F1RKI3 | Histidine triad nucleotide binding protein 1 OS = Sus scrofa OX = 9823 GN = HINT1 PE = 1 SV = 1 − [F1RKI3_PIG] | HINT1 | Histidine triad nucleotide binding protein 1 | −0.71 | 0.0291 |
| Oxidative status | |||||
| I3LQ80 | Vitamin K epoxide reductase complex, subunit 1-like 1 OS = Sus scrofa OX = 9823 GN = VKORC1L1 PE = 1 SV = 2 − [I3LQ80_PIG] | VKORC1L1 | Vitamin K epoxide reductase complex, subunit 1-like 1 | +1.26 | 0.0230 |
| F1S2N0 | Glutathione S-transferase zeta 1 OS = Sus scrofa OX = 9823 GN = GSTZ1 PE = 1 SV = 2 − [F1S2N0_PIG] | GSTZ1 | Glutathione S-transferase zeta 1 | −0.82 | 0.0355 |
| Energy metabolism | |||||
| Q29265 | Phosphoenolpyruvate carboxykinase, cytosolic (Fragment) OS = Sus scrofa OX = 9823 PE = 2 SV = 1 − [Q29265_PIG] | PEPCK | Phosphoenolpyruvate carboxykinase, cytosolic (Fragment) | +1.35 | 0.0061 |
| K9IVI1 | 2-oxoglutarate dehydrogenase, mitochondrial OS = Sus scrofa OX = 9823 GN = OGDH PE = 1 SV = 1 − [K9IVI1_PIG] | OGDH | 2-oxoglutarate dehydrogenase, mitochondrial | +1.57 | 0.0346 |
| F1RJ12 | Protein phosphatase 1 regulatory subunit OS = Sus scrofa OX = 9823 GN = PPP1R3D PE = 4 SV = 1 − [F1RJ12_PIG] | PPP1R3D | Protein phosphatase 1 regulatory subunit | +1.21 | 0.0201 |
| Q2EN80 | NADH dehydrogenase 1 beta subcomplex 6 OS = Sus scrofa OX = 9823 GN = NDUFB6 PE = 1 SV = 1 − [Q2EN80_PIG] | NDUFB6 | NADH dehydrogenase 1 beta subcomplex 6 | +1.21 | 0.0034 |
| F1S1J5 | Glucose-6-phosphatase OS = Sus scrofa OX = 9823 GN = G6PC3 PE = 3 SV = 1 − [F1S1J5_PIG] | G6PC3 | Glucose-6-phosphatase | −0.80 | 0.0109 |
| F1RQQ8 | Alpha-1,4 glucan phosphorylase OS = Sus scrofa OX = 9823 GN = PYGM PE = 1 SV = 2 − [F1RQQ8_PIG] | PYGM | Alpha-1,4 glucan phosphorylase | −0.77 | 0.0380 |
| G3CKJ2 | Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS = Sus scrofa OX = 9823 GN = GAPDH PE = 2 SV = 1 − [G3CKJ2_PIG] | GAPDH | Glyceraldehyde-3-phosphate dehydrogenase (Fragment) | −0.76 | 0.0030 |
| Immune and inflammatory responses | |||||
| I3LEA8 | Unc-93 homolog B1, TLR signaling regulator OS = Sus scrofa OX = 9823 GN = UNC93B1 PE = 4 SV = 2 − [I3LEA8_PIG] | UNC93B1 | Unc-93 homolog B1, TLR signaling regulator | +1.83 | 0.0264 |
| A0A287AP27 | Uncharacterized protein OS = Sus scrofa OX = 9823 GN = CDK9 PE = 4 SV = 1 − [A0A287AP27_PIG] | CDK9 | none | +1.40 | 0.0079 |
| Q2TJZ7 | Microsomal prostaglandin E synthase-1 OS = Sus scrofa OX = 9823 GN = PTGES PE = 1 SV = 1 − [Q2TJZ7_PIG] | PTGES | Microsomal prostaglandin E synthase-1 | +1.39 | 0.0259 |
| Q5W7K7 | Interleukin 6 (Fragment) OS = Sus scrofa OX = 9823 GN = IL-6 PE = 2 SV = 1 − [Q5W7K7_PIG] | IL-6 | Interleukin 6 (Fragment) | +1.26 | 0.0128 |
| F1S9T2 | Uncharacterized protein OS = Sus scrofa OX = 9823 GN = IFI44 PE = 1 SV = 2 − [F1S9T2_PIG] | IFI44 | none | +1.24 | 0.0122 |
| F1RIC1 | Coiled-coil domain containing 86 OS = Sus scrofa OX = 9823 GN = CCDC86 PE = 4 SV = 1 − [F1RIC1_PIG] | CCDC86 | Coiled-coil domain containing 86 | −0.80 | 0.0107 |
| F1RTQ6 | Histone H2B OS = Sus scrofa OX = 9823 GN = HIST1H2BA PE = 1 SV = 1 − [F1RTQ6_PIG] | HIST1H2BA | Histone H2B | −0.80 | 0.0162 |
| Cell structure and motility | |||||
| F1RFA8 | MTOR associated protein, LST8 homolog OS = Sus scrofa OX = 9823 GN = MLST8 PE = 1 SV = 3− [F1RFA8_PIG] | MLST8 | MTOR associated protein, LST8 homolog | +1.51 | 0.0162 |
| F2Z5K5 | Tubulin beta chain OS = Sus scrofa OX = 9823 GN = TUBB4A PE = 1 SV = 2 − [F2Z5K5_PIG] | TUBB4A | Tubulin beta chain | −0.80 | 0.0264 |
| K9IVQ6 | Plectin (Fragment) OS = Sus scrofa OX = 9823 GN = PLEC PE = 2 SV = 1 − [K9IVQ6_PIG] | PLEC | Plectin (Fragment) | −0.73 | 0.0451 |
| A0A287AHG5 | Protein kinase C and casein kinase substrate in neurons 1 OS = Sus scrofa OX = 9823 GN = PACSIN1 PE = 1 SV = 1 − [A0A287AHG5_PIG] | PACSIN1 | Protein kinase C and casein kinase substrate in neurons 1 | −0.68 | 0.0083 |
| A0A287AYM2 | Glial fibrillary acidic protein OS = Sus scrofa OX = 9823 GN = GFAP PE = 1 SV = 1 − [A0A287AYM2_PIG] | GFAP | Glial fibrillary acidic protein | −0.56 | 0.0146 |
Compared with control group, + means this protein was up-regulated in fiber group; − means this protein was down-regulated in fiber group; none means no gene name or protein name for this protein.