Highlights
-
•
MRVE measures the dynamic variability of MEG signals at a range of temporal scales.
-
•
MRVE correlation and AEC detected robust resting state functional connectivity.
-
•
The most robust patterns were found for fS=75Hz MRVE correlation and beta band AEC.
-
•
Connectivity strength negatively correlates with local MRVE at fine time scales.
-
•
Eye movement affects resting state connectivity measurements across frequencies.
Keywords: Functional connectivity, MEG, Resting state, Variability, Multi-scale rank-Vector entropy
Abstract
Recent studies have shown how MEG can reveal spatial patterns of functional connectivity using frequency-specific oscillatory coupling measures and that these may be modified in disease. However, there is a need to understand both how repeatable these patterns are across participants and how these measures relate to the moment-to-moment variability (or ‘irregularity) of neural activity seen in healthy brain function. In this study, we used Multi-scale Rank-Vector Entropy (MRVE) to calculate the dynamic timecourses of signal variability over a range of temporal scales. The correlation of MRVE timecourses was then used to detect functional connections in resting state MEG recordings that were robust over 183 participants and varied with temporal scale. We compared these MRVE connectivity patterns to those derived using the more conventional method of oscillatory amplitude envelope correlation (AEC) using methods designed to quantify the consistency of these patterns across participants. Using AEC, the most consistent connectivity patterns, across the cohort, were seen in the alpha and beta frequency bands. At fine temporal scales (corresponding to ‘scale frequencies, = 30-150Hz), MRVE correlation detected mostly occipital and parietal connections. These showed high similarity with the networks identified by AEC in the alpha and beta frequency bands. The most consistent connectivity profiles between participants were given by MRVE correlation at = 75Hz and AEC in the beta band. The physiological relevance of MRVE was also investigated by examining the relationship between connectivity strength and local variability. It was found that local activity at frequencies 10Hz becomes more regular when a region exhibits high levels of resting state connectivity, as measured by fine scale MRVE correlation ( 30-150Hz) and by alpha and beta band AEC. Analysis of the EOG recordings also revealed that eye movement affected both connectivity measures. Higher levels of eye movement were associated with stronger frontal connectivity, as measured by MRVE correlation. More eye movement was also associated with reduced occipital and parietal connectivity strength for both connectivity measures, although this was not significant after correction for multiple comparisons.
1. Introduction
In recent years, MEG has revealed much about the electrophysiological underpinnings of connectivity in the brain. The direct view of neuronal activity provided by MEG and its excellent temporal resolution have allowed the investigation of frequency-specific communication (Brookes, Woolrich, Luckhoo, Price, Hale, Stephenson, Barnes, Smith, Morris, 2011, Hillebrand, Barnes, Bosboom, Berendse, Stam, 2012, Hipp, Hawellek, Corbetta, Siegel, Engel, 2013) and dynamic changes in connectivity on the millisecond timescale (Baker, Brookes, Rezek, Smith, Behrens, Smith, Woolrich, 2014, O’Neill, Tewarie, Vidaurre, Liuzzi, Woolrich, Brookes, 2017).
Alterations in MEG connectivity have also been detected in patient groups (Boon, Hillebrand, Olde Dubbelink, Stam, Berendse, 2017, Brookes, Tewarie, Hunt, Robson, Gascoyne, Liddle, Liddle, Morris, 2016, Engels, Yu, Stam, Gouw, van der Flier, Scheltens, van Straaten, Hillebrand, 2017, Ghanbari, Bloy, Edgar, Blaskey, Verma, Roberts, 2015, Hamandi, Routley, Koelewijn, Singh, 2016, Van Dellen, Douw, Hillebrand, de Witt Hamer, Baayen, Heimans, Reijneveld, Stam, 2014). However, to be clinically useful, connectivity research must progress from group-level analysis to the characterisation of individual subjects. To make meaningful comparisons between connectivity profiles of individuals, robust connectivity measures are needed that give consistent results for subjects with the same pathology.
Several recent studies have found that many commonly used techniques for measuring functional connectivity in MEG lack repeatability between healthy subjects, and even show inconsistency over repeated scans of the same subject (Colclough, Woolrich, Tewarie, Brookes, Quinn, Smith, 2016, Liuzzi, Gascoyne, Tewarie, Barratt, Boto, Brookes, 2017, Wens, Bourguignon, Goldman, Marty, de Beeck, Clumeck, Mary, Peigneux, Van Bogaert, Brookes, De Tiege, 2014). Colclough et al. (2016) found that the method that gave the most consistent connectivity was oscillatory amplitude envelope correlation (AEC), using symmetric orthogonalisation to remove spurious zero-lag correlation between timecourses due to signal leakage (Colclough et al., 2015). The repeatability of connectivity given by any alternative methods could therefore be compared to AEC to assess the extent to which it can add to our understanding of cortical communication in health and disease.
Many of the most popular techniques for measuring connectivity are based on measuring the synchronisation of oscillatory activity within narrow frequency bands. Another, less studied, aspect of electrical neural activity is the constantly fluctuating activity present in the brain even when it is supposedly ‘at rest’. This variable activity is observed when there is a breakdown of synchrony between neurons, allowing an increase in the information that can be processed within a network (Brookes et al., 2015). The MEG signals generated by such activity consist of a superposition of many low power signals from smaller neuron populations. This variable activity appears more irregular, or ‘random’, and so is often dismissed as neural ‘noise’, but it is thought to be vital for healthy brain function (Deco, Jirsa, McIntosh, 2011, Garrett, Samanez-Larkin, MacDonald, Lindenberger, McIntosh, Grady, 2013, Takahashi, 2013). It has been shown that the variability of neural activity increases as the brain matures (Lippé, Kovacevic, Mcintosh, 2009, Mcintosh, Kovacevic, Itier, 2008, McIntosh, Vakorin, Kovacevic, Wang, Diaconescu, Protzner, 2014), and it has been found to be altered in patient groups where activity that is either too regular or too variable is associated with mental disorder (Brookes, Hall, Robson, Price, Palaniyappan, Liddle, Liddle, Robinson, Morris, 2015, Fernández, Gómez, Hornero, López-ibor, 2013, Ghanbari, Bloy, Edgar, Blaskey, Verma, Roberts, 2015, Mateos, Guevara Erra, Wennberg, Perez Velazquez, 2018, Mizuno, Takahashi, Cho, Kikuchi, Murata, Takahashi, Wada, 2010, Monge, Gómez, Poza, Fernández, Quintero, Hornero, 2015, Protzner, Valiante, Kovacevic, McCormick, McAndrews, 2010, Takahashi, 2013).
While the physiological role of variability in the brain is not certain, it is possible that it is related to levels of synchronisation between cortical regions, i.e. connectivity. The synchronisation of oscillatory activity, which is highly regular and therefore has low variability, is currently the most promising mechanism for connectivity between brain regions (Brookes, Woolrich, Luckhoo, Price, Hale, Stephenson, Barnes, Smith, Morris, 2011, Donner, Siegel, 2011, Fries, 2005, Hillebrand, Barnes, Bosboom, Berendse, Stam, 2012, Schnitzler, Gross, 2005, Tewarie, Hunt, Neill, Byrne, Aquino, Bauer, Mullinger, Coombes, Brookes, 2019). In contrast, it is thought that local information processing performed within segregated brain regions is associated with signals that contain higher levels of information and therefore have higher variability (Friston, Tononi, Edelman, 1996, Tononi, Sporns, Edelman, 1994). Therefore, measures of variability and oscillatory activity may be sensitive to complementary aspects of functional connectivity. It was found in a recent MEG study that variability and oscillatory amplitude have a complex relationship, and that the variance in the variability of neuronal signals could only partially be explained by oscillatory amplitude across frequencies (Brookes et al., 2015). Variability could therefore provide information about functional connectivity beyond that which is available from measures based on the oscillatory components of brain activity.
There is evidence for a relationship between neural variability and functional connectivity in the literature. One fMRI study found a correlation between the variability of BOLD signals and functional connectivity (Wang et al., 2018) between spatially separated cortical regions. Age-related connectivity changes have also been shown to covary with the variability of EEG and MEG signals (McIntosh, Vakorin, Kovacevic, Wang, Diaconescu, Protzner, 2014, Vakorin, Lippe, McIntosh, 2011) and in an EEG study applying graph theory to functional networks, variability was found to correlate with network node centrality (Mišić et al., 2011).
The variability of neural activity can be quantified using entropy measures, where more disordered and irregular signals have larger entropy, and more regular signals have lower entropy. There are many possible ways of estimating signal entropy (Garrett et al., 2013). However, one measure that has been shown to be useful in measuring the spatio-temporal variability of MEG signals is Rank-Vector-Entropy (RVE) (Brookes, Hall, Robson, Price, Palaniyappan, Liddle, Liddle, Robinson, Morris, 2015, Robinson, Mandell, Coppola, Robinson, Ermentrout, Herrmann, 2013). RVE is a derivative of Shannon entropy (Shannon, 1948) that has a built-in ability to provide a dynamic timecourse of signal entropy, retaining the temporal resolution of the original signal. It is also computationally efficient, is calculated from broadband activity timecourses, and is independent of signal amplitude (Robinson et al., 2013). The relationship between variability and neural synchronisation, and the desirable qualities of RVE, suggest that RVE could be an alternative measure to use in functional connectivity analysis that is not limited to the consideration of oscillatory activity.
RVE, and many other entropy measures, measure signal variability at a single temporal scale. However, it has been shown that neural activity contains recurring patterns that occur across a range of such scales (Costa et al., 2005). It is not certain what these correspond to physiologically, however it is thought that activity at coarser scales is associated with long range, distributed information processing, while more local processing is captured at finer scales (Vakorin et al., 2011).
To utilise the in-built temporal resolution that is specific to RVE, a multi-scale extension of RVE (MRVE) is proposed (Costa et al., 2005). MRVE timecourses at any temporal scale can be calculated from MEG virtual sensor timecourses at any number of required voxels, allowing for a direct comparison with dynamic oscillatory measures. In this paper, MRVE was used used to reconstruct functional connectivity patterns, assess how repeatable these patterns are across a cohort of healthy volunteers and investigate how these patterns vary with temporal scale. We then compared connectivity profiles measured by MRVE correlation with those derived using amplitude envelope correlation (AEC). We also compared the robustness of MRVE correlation, and whether it provides extra information over standard methods, by comparing connectivity patterns derived at multiple entropy time scales with those derived from AEC in multiple frequency bands. The physiological relevance of variability was then investigated by examining the relationships between MRVE, oscillatory amplitude and regional connectivity strength. Finally, the effects of eye movement on the measured connectivity were investigated through analysis of EOG recordings.
2. Methods
2.1. Data acquisition
Five-minute eyes open resting state MEG recordings were acquired from 183 participants (123 female) as part of the ‘100 Brains’ and UK MEG Partnership normative scanning projects. Inclusion criteria ensured all participants were aged 18–65 (mean 24.55.4 years), had completed or were undertaking a degree, had normal or corrected-to-normal vision, and had no history of neurological or neuropsychiatric disorders. All procedures were given ethical approval by the Cardiff University School of Psychology Ethics Committee, and all participants gave written informed consent before taking part.
Data were acquired using a whole head 275-channel CTF radial gradiometer system at a 1200 Hz sample rate. An additional 29 reference channels were recorded for noise cancellation purposes and the primary sensors were analysed as synthetic third-order gradiometers (Vrba and Robinson, 2001). Subjects were seated upright in the magnetically shielded room with their head supported with a chin rest to minimize movement. Participants were asked to rest and fixate their eyes on a central red fixation point, presented on either a CRT monitor or LCD projector. The fixation point was presented on a background of zero luminance to minimise the effect of the screen refresh rates on cortical oscillatory activity. Head localisation was performed at the beginning and end of each scan, using three fiducial markers. Horizontal and vertical electro-oculograms (EOG) were recorded to monitor eye blinks and eye movements.
Participants also underwent a magnetic resonance imaging (MRI) session to acquire a T1-weighted 1mm anatomical scan, using an inversion recovery spoiled gradient echo acquisition (3T, General Electric).
2.2. Pre-processing
All data were downsampled to 600Hz and a 1-150Hz bandpass filter applied. Datasets were cut into 2 second epochs, which were each visually inspected and removed if they contained any major artefacts, such as ocular or muscular movement artefacts. Out of a maximum of 150 epochs across the five-minute recording, an average number of trials were retained across all participants. There was no significant difference in the number of trials retained between male and female participants as determined by an unpaired t-test (). The effective number of degrees of freedom was calculated using the Satterthwaite approximation to account for a difference in sample variance between the male and female subgroups.
Co-registration was performed manually between the MEG and MRI coordinate spaces; the fiducial locations were kept fixed relative to each participants nasion, left and right ears and so could then be identified and marked on their MRI scan.
To perform analysis in source space, MEG virtual sensor timecourses were obtained using a scalar LCMV beamformer (Van Veen et al., 1997) using FieldTrip (Oostenveld et al., 2011). Lead fields were calculated using a localspheres head model for voxels on a 6mm grid (Huang et al., 1999). Covariance matrices were obtained using the broadband pre-processed data filtered between 1-150Hz, as well as for activity within ten narrower frequency bands (1–4, 3–8, 8–13, 13–30, 40–60, 60–80, 80–100, 100–120, 120–140 and 140-160Hz). For all frequency bands, beamformer weights were normalised using the vector norm (Hillebrand et al., 2012). The coordinate space for each participant was transformed to the MNI template (Fonov et al., 2009). The estimated timecourses were then calculated at each voxel for each frequency band, which were then subsequently used to calculate variability and oscillatory amplitude timecourses.
2.3. Variability
2.3.1. RVE
The RVE method was first described by (Robinson et al., 2013). At each time point, a window of points is taken from the signal, each separated by a lag, to avoid oversampling, where represents the sample rate, and is the low-pass frequency applied to the data.
(1) |
These points are ordered in size, and then converted to the position they originally held in the window. This is the ‘rank-vector’ associated with this time point. The Shannon entropy is calculated at each time point using a state probability distribution derived from the frequency of occurrence of the rank-vectors that occurred previously in the signal (Shannon, 1948). Temporal resolution is introduced using a ‘leaky integrator’, which gives RVE a ‘memory’ of states that is limited in time (Robinson et al., 2013).
2.3.2. MRVE
The calculation of MRVE at each scale is identical to the calculation of RVE, except that each instance of the sliding window is formed from a ‘coarse-grained’ version of the raw signal. For a given scale factor, at each time point in the signal, consecutive, non-overlapping windows of points are taken starting at where each value is separated by lag . Then, the values in the sliding window are found by taking the average of the data points within these windows. This is given by Eq. 2, where represents the signal timecourse sampled with lag and is the window found at time point .
(2) |
As the rank-vector calculated is dependent on the scale factor used, a separate entropy timecourse is generated for each value of used.
The time scale examined by MRVE is determined by the effective sample frequency of the values in . This ‘scale frequency’, is determined by the scale factor, where a higher value of corresponds to a coarser sampling rate and therefore a lower value of (Courtiol et al., 2016). Eq. 3 relates the scale factor to to aid in the interpretation of MRVE and its relationship with oscillatory measures.
(3) |
2.4. Functional connectivity
90 nodes were selected by taking one voxel timecourse to represent each region of the AAL atlas (Tzourio-Mazoyer et al., 2002). The selection was performed for each participant and for each frequency band, by identifying the virtual sensor time course, within each AAL region, that had the highest temporal standard deviation. This voxel was chosen as an estimate of the timecourse exhibiting the maximum SNR within the region. To avoid the detection of spurious connections due to signal leakage, the zero-lag correlation between all 90 AAL timecourses was removed by symmetric orthogonalisation (Colclough et al., 2015). This resulted in 90 orthogonal timecourses for each participant and frequency range, which were then used to calculate MRVE and oscillatory amplitude timecourses.
MRVE was calculated from the broadband, 1-150Hz virtual sensor timecourses, using a window length of and a decay time constant of . Timecourses were calculated for 25 scale factors between with corresponding scale frequencies ranging from Hz. Oscillatory amplitude envelopes were found by applying the Hilbert transform to the timecourses obtained for each of the aforementioned narrow frequency bands. Functional connectivity was then measured as described by Koelewijn et al. (2019). The MRVE and Hilbert envelope timecourses were de-spiked to remove artefactual temporal transients using a median filter, and downsampled to 1 Hz. The first 50 samples were then trimmed to remove the MRVE ‘warm-up’ period while the histogram populates, and a window of samples at the end was removed, the length of which was defined by the length in time of the longest sliding window used in the MRVE calculation, corresponding to the largest scale factor.
Functional connectivity matrices were calculated separately for MRVE at each scale, and for oscillatory amplitude within each narrow frequency band by correlating each of the 90 timecourses from each participant with all others. The correlation values were then normalised by converting them to Z-scores using the Fisher transform. These were variance-normalised to correct for the effects of the varying timecourse lengths between participants, due to the removal of data epochs containing artefacts (Koelewijn et al., 2019). Without such normalisation, datasets which have had more epochs removed are more likely to show higher correlations between the calculated amplitude and entropy envelopes, by chance, due to their shorter length. Significant connections were determined by first ranking connections in order of strength for each participant, where the strongest connection was given the value 1 and the weakest given value 0. For each connection, the mean rank value was then found across participants. ‘Valid connections’ were taken as those with a mean rank above a threshold of 0.8, indicating that these connections are consistently among the strongest across participants. This threshold is arbitrary, however it has been shown previously to be a suitable threshold for detecting robust resting state network connections using AEC (Koelewijn et al., 2019).
2.5. Software
Data analysis was performed in MATLAB, using Fieldtrip functions and custom built MATLAB scripts (Oostenveld et al., 2011). Connections were visualised on a template brain using the SourceMesh MATLAB toolbox, and voxel-wise correlation colourmaps were created in mri3dX.
3. Results
3.1. Consistency of functional connectivity across participants
First, MRVE correlation was used to measure functional connectivity and we assessed which of these connections were consistently among the strongest across subjects. Fig. 1 shows the location and number of the valid connections found for scale frequencies, -150Hz. At higher scale frequencies, i.e. at finer temporal scales, most connections are found in occipital and parietal regions. As shown in Fig. 2, the maximum number of connections was found at = 75Hz. However, there is a second peak in the number of valid connections found at = 10Hz, where more frontal connections are seen. Cumulatively across all scales, valid connections were detected between 254 different pairs of nodes.
The valid connections found using AEC are also shown in Fig. 1. Valid connections were found within four frequency bands. The most valid connections were seen in the beta band, giving the same number as for = 75Hz using MRVE correlation. Across all frequency bands, valid connections were detected between 248 different node pairs.
We then investigated whether MRVE correlation could provide additional information about functional connectivity beyond that provided by AEC analysis. Firstly, it was seen whether each method could detect unique connections that were not deemed valid by the alternate method. To determine this for each connection, its mean rank, averaged across all subjects, was calculated for all scale frequencies for MRVE and for all frequency bands using AEC. For each connection, we then found the highest mean rank for any of the MRVE scales and the highest mean rank for any of the AEC frequency bands. Those with a highest mean rank above the threshold of 0.8 for either method were taken as detectable by the corresponding connectivity measure. Fig. 2 shows the highest mean rank values for each connection plotted against each other. Those connections that are ‘unique’ to each method are shown plotted between the AAL nodes. 200 connections are visible for both MRVE correlation and AEC across all scales and frequency ranges, leaving 54 connections (21%) that can only be seen using MRVE correlation, and 49 (19%) that can only be seen using AEC.
3.1.1. Robustness of connectivity measures to sample size
The robustness of each connectivity measure to the participant sample size was determined using bootstrapping. Sub-samples of a range of sizes were taken from the participant cohort by simple random sampling with replacement. The number of valid connections was found for each sub-group taken, over 1000 tests per sub-group size, . It can be seen in Fig. 3A that the average number of connections found was less stable when using fewer participants in the analysis for both MRVE correlation and AEC. The average number approximates to the number of connections detected using the whole cohort (as shown in Fig. 2A) when using . However, for both MRVE correlation and AEC, the variance in the number of valid connections detected was found to be larger when fewer participants were included. For a smaller sample was also associated with more connections detected on average.
3.1.2. Consistency of connectivity patterns across participants
The consistency of the connectivity profiles between individuals was then investigated. The average connectivity profile for each frequency band and scale frequency was taken by vectorising the mean score connectivity matrix. This profile was then correlated with the equivalent vector of scores obtained for each participant individually. For very robust networks that are highly reproducible across subjects, this method will give consistently high pattern-correlation with the average connectivity profile. However, the distribution of correlation coefficients will be, on average, lower for a network that shows high variability across participants. Each pattern-correlation coefficient is represented in the colour plot shown in Fig. 3B. For each scale factor and frequency band, these have been sorted in descending order of participants. Consistent high correlation with the average connectivity patterns, representing high cross-subject repeatability, can be seen for MRVE correlation at scale frequencies 50 and 75Hz, and for alpha and beta band AEC.
To further quantify the consistency of each connectivity measure across subjects, the mean correlation with the average connectivity profile was found for each scale frequency and frequency band (i.e. the average was taken from each column on the colour plot). These average pattern-correlation values are shown in Fig. 3C, with errorbands generated by bootstrapping, using 1000 sub-samples of group size . The highest mean pattern-correlation was found for MRVE correlation, =75Hz (), followed by beta band AEC (), suggesting that these two connectivity profiles were the most reproducible across subjects.
The pattern-correlation values (as shown in Fig. 3B) were then compared for MRVE correlation at = 75Hz and beta band AEC. The sorted pattern-correlation values for these frequencies are shown in Fig. 3D. It appears that MRVE correlation at = 75Hz gives individual profiles that are slightly more similar to the average connectivity profile than beta band AEC. The pattern-correlation values were then compared in a permutation test, where the group assignment was randomised between 75Hz MRVE and beta band AEC over 10,000 permutations. However, it was found that there was no significant difference between the pattern-correlation values (p=0.344) for each connectivity measure.
3.1.3. Within-participant consistency between scales and frequency bands
It was then investigated whether the pattern-correlation coefficients calculated for each participant were related between scale frequencies and frequency bands. For example, it would be interesting to determine whether those participants who exhibited high similarity to the mean connectivity profile for one frequency also exhibited high pattern-correlations for other frequencies. For each pair of scale frequencies and frequency bands, the correlation between the pattern-correlation z-scores was found across participants (with the participant order held constant, in contrast with Fig. 3B). The resulting Pearson correlation coefficients are shown in Fig. 3E.
No negative correlations were found between any frequency pairings, within or between connectivity measures. This indicates that there are no frequencies for which a high pattern-correlation indicates that a participant is more likely to have a lower pattern-correlation for another scale frequency or frequency band.
Strong positive correlations were found between the pattern-correlation vectors at a range of high MRVE scale frequencies, and also between low scale frequencies, with a crossover frequency of approximately 20Hz. This indicates that participants exhibiting high pattern-correlation at one high scale frequency are also likely to show high similarity to the mean connectivity profile for other scale frequencies above 20Hz. The same can be seen for scale frequencies below 20Hz. However, the pattern-correlations exhibited by each participant at high scale frequencies have no relationship with their low scale frequency pattern-correlation coefficients.
For AEC, the strongest relationships between pattern-correlation vectors are found across the frequency bands in the gamma range (40Hz). Positive relationships are also observed between pattern-correlation vectors corresponding to the lower frequency bands, the strongest of which is found between alpha and beta band pattern-correlation. As was observed for MRVE correlation, no relationships were found between the high and low frequency ranges.
Some relationships were also observed between the two connectivity measures. A strong positive correlation was observed between pattern-correlation vectors corresponding to high scale frequency MRVE correlation and alpha and beta band AEC. A weaker relationship was also found between the lower MRVE scale frequencies and delta band AEC. Interestingly, these relationships correspond to frequency pairings where high similarity was observed between the average connectivity profiles, as seen in Fig. 1. This suggests that there is high within-subject similarity between connectivity profiles calculated by MRVE correlation at 75Hz and AEC profiles in the alpha and beta bands, in participants exhibiting high pattern-correlations for these frequencies.
3.2. Predicting MRVE connectivity from AEC connectivity
The amount of variance in the MRVE correlation that could be explained by AEC was then calculated using a multiple regression model. The fraction of the variance in the MRVE connectivity that could be explained by AEC was calculated by vectorising the connectivity matrices and using the model in Eq. 4, where represents each frequency band, is the number of frequency bands used in the model and represent the regression coefficients.
(4) |
The adjusted R value found for each scale factor is shown in Fig. 4. The adjusted R value was used to determine which combination of frequency bands would best explain the MRVE connectivity, as the highest adjusted R values are obtained when the model only includes predictor variables which add explained variance beyond that which would be expected by chance. However, it was found that the highest adjusted R values for each scale frequency were achieved when the AEC connectivity vectors from all frequency bands were incorporated in the model, except for = 7.9Hz when the alpha band was excluded, and for = 150Hz when the 80-100Hz band was excluded.
3.3. Temporal correlation between MRVE and oscillatory amplitude envelopes
The relationship between entropy and oscillatory amplitude was then investigated. At each voxel in the brain, the temporal correlation between MRVE timecourses and oscillatory amplitude envelopes was found across scale frequencies and frequency bands. Average -scores are shown on a template brain in Fig. 5.
The relationship is shown to be dependent on the MRVE scale frequency and oscillatory frequency band. However, the direction is generally consistent across the brain for each combination. At high scale frequencies ( = 50-150Hz), MRVE shows a strong negative correlation with power in the alpha and beta frequency bands, where the strongest relationship is seen between MRVE at = 75Hz and beta band amplitude in the occipital and parietal regions. At = 50-75Hz, a weak positive correlation with gamma band amplitude is also observed, which is strongest in frontal and temporal regions. At mid to lower scale frequencies ( = 1-25Hz), MRVE shows a negative correlation with delta band amplitude but a positive correlation with power in the alpha and beta bands. However, the areas in which the strongest positive correlation is observed varies with scale frequency and differs between the two frequency bands. The strongest positive correlation was observed between MRVE at = 21.4Hz and beta band amplitude in frontal and temporal regions. However, positive correlation was also observed in occipital and parietal regions between alpha and beta band amplitude and MRVE for = 1–8.8Hz.
3.4. The relationship between MRVE magnitude, oscillatory amplitude and connectivity strength
The overall connectivity ‘strength’ was then estimated for each AAL region. This was done for each node by finding the sum of the correlation coefficients indicating the connectivity between that node and all other nodes, for each AEC frequency band and each MRVE correlation scale frequency. This gave one connectivity strength value for each AAL region for each participant, for each frequency band and scale frequency used. The average entropy value within each AAL region was then found at each scale frequency for each participant, by taking the average value of the MRVE timecourses from the node voxel used in the connectivity analysis. Fig. 6 shows the correlation between a vector containing all average entropy values across participants and the corresponding connectivity strength values. The correlation between connectivity strength and average oscillatory amplitude was also found, taken as the mean value of the hilbert envelope for each frequency band.
At high scale frequencies, it was generally found that average variability negatively correlates with connectivity strength. The strongest relationship with MRVE correlation was found between average entropy at = 75Hz and connectivity strength at = 150Hz ( ), whereas the strongest relationship with AEC was found between average entropy at = 50Hz and alpha band connectivity strength ( ). However, a weaker positive correlation was found between average entropy at fine time scales and connectivity at coarser scales, where the strongest correlation was found between average entropy at = 50Hz and connectivity strength at = 10Hz ( ). A positive correlation is also seen between average entropy at very low scale frequencies ( = 1-3Hz) and AEC in the alpha and beta bands, as well as with MRVE correlation at the highest scale frequencies. This is strongest between average entropy at = 3Hz and alpha band AEC ( ), and between average entropy at = 2Hz and MRVE correlation at = 150Hz ( ).
In contrast, there was generally a positive relationship between average oscillatory amplitude and connectivity strength. As shown in the top left of Fig. 6, for AEC connectivity the strongest correlations were found when relating amplitude and connectivity strength within the same frequency band, where the strongest relationship was found for the beta band ( ). Average amplitude also generally showed a positive correlation with connectivity strength as measured by MRVE correlation at fine time scales, where the strongest relationship was found between alpha band amplitude and connectivity strength for = 150Hz ( ).
3.5. Effects of eye movement on functional connectivity measurements
The frontal location of connections observed for low MRVE scale frequencies and for delta band AEC suggests that they could, at least partially, be spurious due to eye movement. We therefore analysed the EOG recorded with each scan to investigate whether this connectivity could be explained by eye movement artefacts. For each participant, their level of eye movement during the MEG scan was summarised as the standard deviation of the EOG timecourse measuring their horizontal eye movements. However, there was a large difference in amplitude scaling between the EOG for the first and second halves of the participant cohort, so the standard deviation values were then converted to Z scores separately for each half of the cohort. For each MRVE scale frequency and AEC frequency band, a linear regression model was used to determine whether a significant amount of variance in the connectivity strength measured across participants could be explained by horizontal eye movement for each valid connection. Fig. 7 shows the connections for which a significant relationship between connectivity strength and eye movement was found. For low MRVE scale frequencies, a significant positive relationship was found between eye movement and connectivity strength for some frontal connections. For some of these connections, a significant relationship was still found after Bonferroni correction for multiple comparisons. This suggests, as hypothesised, that eye movement could be driving the frontal connectivity detected using MRVE correlation at these scale frequencies. However, no such relationship was found between eye movement and delta band AEC connectivity strength.
In contrast, for alpha and beta band AEC and for MRVE correlation at high scale frequencies (Hz) a negative relationship was found between connectivity strength and eye movement for a number of occipital and parietal connections. This suggests that higher levels of eye movement are associated with reduced resting state connectivity in these regions. However, at these frequencies, no connections were found to exhibit a significant relationship after correction for multiple comparisons.
4. Discussion
The correlation of neural variability as measured by MRVE was used here to detect robust functional connections from MEG recordings, suggesting that this is a viable method for the analysis of resting state connectivity. The existence of robust connections that can only be detected by MRVE correlation also suggests that this method can provide complementary information to that provided by AEC.
By introducing the multi-scale element to the RVE method, it was possible to observe network connections that were present at different temporal scales. The number of valid connections detected and the brain areas they originated from varied with each scale frequency, although it was found that two general patterns of connectivity emerged.
At finer temporal scales (-150Hz), the networks revealed are dominated by occipital and parietal connections, with some fronto-parietal and temporo-parietal connections. Connectivity in these regions during the resting state has been well established in the literature, in both fMRI (Lee et al., 2013) and MEG studies, where connections in these areas have been found in the alpha and beta frequency bands using oscillation-based connectivity measures (Brookes, Woolrich, Luckhoo, Price, Hale, Stephenson, Barnes, Smith, Morris, 2011, Hillebrand, Barnes, Bosboom, Berendse, Stam, 2012).
The relationship between MRVE at fine time scales and oscillatory amplitude in the alpha and beta frequency bands was a recurring feature throughout the analysis here. It was shown that the connectivity profiles revealed by fine-scale MRVE correlation and AEC in the alpha and beta bands showed high levels of similarity; the AEC within the alpha and beta frequency ranges made large contributions to the explained variance in the MRVE correlation at Hz, the scale at which most connections were detected. It was also found that fine-scale variability timecourses exhibited a strong negative correlation with the alpha and beta band amplitude envelopes, and that connectivity strength negatively correlates with average MRVE at this frequency while positively correlating with alpha and beta band amplitude. These findings imply that high levels of alpha and beta band AEC are associated with more regular activity at scale frequencies = 30-150Hz.
It could be that the decrease in variability represents a reduction in information processing performed locally within areas showing high levels of inter-regional connectivity. Entropy is maximised when there is the least integration between brain regions, while increased connectivity introduces statistical dependencies from activity in other brain areas and so decreases the ‘randomness’ exhibited by a region (Tononi et al., 1994).
These results are also potentially consistent with a computational model that recently showed that correlated amplitude envelope fluctuations in the alpha and beta bands are driven by time-delayed coupling between oscillators in the gamma band (Cabral et al., 2014). It was found that transient synchronisation between these oscillators led to correlated amplitude fluctuations at a reduced collective frequency. Future work could investigate whether the correlation between entropy timecourses at high scale frequencies is driven by the degree of synchronisation between oscillators at the same natural frequencies.
At coarser temporal scales, a second network pattern emerged consisting of mostly frontal and temporal connections that most closely resembled the AEC network found within the delta band. This similarity was again supported by the regression analysis, where the delta band AEC explained the largest fraction of variance in the MRVE correlation for scale frequencies = 1–13.6Hz. The overall fraction of the variance that can be explained at these coarser time scales is relatively small, suggesting that MRVE correlation provides more novel information at these scales beyond that which can be observed using AEC.
However, the EOG regression analysis revealed that the MRVE correlation observed at these low scale frequencies may have been driven by artefactual signal components generated by eye movements. A fixation point was used to limit eye movements, but it was found that participants still exhibited horizontal eye movement during the recordings, in agreement with previous resting state research (Fransson et al., 2014). Future work could repeat the analysis outlined here using data that has been cleaned of eye movement artefacts, for example using ICA, to determine whether these frontal connections are still observed. However, it was also found that eye movement may affect the posterior connectivity detected by alpha and beta band AEC and MRVE correlation at high scale frequencies. Although no connections exhibited a significant negative relationship after the correction for multiple comparisons, there is evidence for a relationship between eye movement and resting state activity from several fMRI studies. It has been found that disrupted eye movement due to Parkinson’s disease is associated with widespread resting state functional connectivity alterations (Gorges, Müller, Lulé, LANDSCAPE Consortium, Pinkhardt, Ludolph, Kassubek, 2016, Gorges, Müller, Lulé, Ludolph, Pinkhardt, Kassubek, 2013). It has also been found that areas within the default mode network show fluctuations in activity that correlate with spontaneous eye movement (Fransson et al., 2014). This could have implications for the study of functional connectivity in patient groups known to exhibit altered eye movements relative to controls, such as schizophrenia (Calkins et al., 2008). It is unclear how the removal of ocular signal components during data cleaning would affect the measurement of associated functional connectivity, and therefore the detection of alterations in patients.
Investigating the entropic characteristics of the EOG was beyond the scope of this study. However, MRVE correlation strength at coarse time scales was found to exhibit weak positive correlations with average entropy at fine scales and with delta band amplitude. A weak negative correlation can also be seen with variability at the coarsest time scales. This suggests that ocular activity may be more regular at coarse time scales but show higher variability at finer scales. While no relationship was found between delta band AEC and eye movement during the EOG regression analysis, this also hints at an association between eye movement levels and delta band amplitude.
It is interesting to note that MRVE correlation, for a given scale frequency, does not provide the same information about functional connectivity as AEC for an overlapping frequency band. For example, while the frequency band that shows the most connections using AEC ranges from 13-30Hz, scale frequencies in this range are associated with a trough in the number of connections when using MRVE correlation. In fact, Fig. 4 shows that for each frequency band, AEC explains a low percentage of the variance in the MRVE correlation at scale frequencies in the same range. This suggests that in regions showing high connectivity strength, the amplitude and variability of activity of a particular frequency are not related.
MRVE was shown to have a complex relationship with oscillatory amplitude. In general, a positive correlation was found between oscillatory amplitude and entropy timecourses calculated within the same frequency range, whereas a negative correlation is seen when the MRVE scale frequency is approximately higher than the lowpass frequency of the oscillatory frequency band. At the finest time scales, this is seen as a biphasic relationship where MRVE shows negative correlation with low frequency amplitude but positive correlation with gamma band amplitude. This has been found previously in a study using RVE at a single time scale, when applied to task data (Hz) (Brookes et al., 2015). Here, the relationship was replicated in resting state data and was found to be consistent in direction across the brain. However, by considering multiple time scales using MRVE, it was found that the correlation between entropy and amplitude envelopes varies with the entropy scale frequency.
While the direction of each relationship was found to be generally consistent across the brain, the strength of the relationships were often found to vary spatially. For a number of combinations, the correlation was found to be strongest either in occipital and parietal regions, where most functional connections were detected, or in frontal and temporal regions. For example, the negative correlation between beta band amplitude and MRVE at fine scales is strongest in more posterior regions. In contrast, the positive correlation observed for values within the beta frequency range is strongest in anterior regions. This could imply that regional connectivity strength moderates the relationship between the variability and oscillatory amplitude of neural activity within that region. Future work could look at whether the same phenomenon is observed during a task, during which different regions would show higher connectivity strength.
Connectivity strength was generally found to positively correlate with oscillatory amplitude, in agreement with previous research (Tewarie et al., 2019), but was found to negatively correlate with variability. This is consistent with the prevailing theory that oscillatory activity (which is highly regular) facilitates synchronisation between cortical regions (Cabral, Luckhoo, Woolrich, Joensson, Mohseni, Baker, Kringelbach, Deco, 2014, Fries, 2005, Schnitzler, Gross, 2005). The relationship between connectivity and oscillatory amplitude is often confounded by the fact that an increase in amplitude is associated with an increase in SNR. However, it is unlikely that this would be causing the observed relationship with variability. If the low measured entropy was driven by increases in underlying signal strength, we would expect to detect connections in the gamma band using AEC that match those found by MRVE correlation for scale frequencies in the same range, whereas in reality very few connections are seen using AEC at these high frequencies.
4.1. Limitations
One limitation of this study is that the performance of MRVE correlation was only compared to AEC. AEC was chosen for comparison as it has been shown to give the most consistent results across participants (Colclough et al., 2016). This method was therefore the appropriate benchmark to use in a comparison of the number of robust connections detected by each connectivity measure. However, it could also be interesting to look at how MRVE correlation relates to connectivity measured by techniques that are centred around phase relationships. It has been suggested that the reduction of signal variability facilitates phase relationships to occur between brain regions (Mcdonough et al., 2014) so it could be investigated whether there is similarity between the connections each method can detect and how this would differ from the relationship between MRVE correlation and AEC.
Another constraint on this analysis was the limit on the resolution of scale frequencies that could be used to generate MRVE timecourses. By increasing the sample rate of the data acquisition, it would be possible to obtain MRVE timecourses at finer temporal scales, and at more frequencies within the frequency range investigated here. For example, with a lowpass frequency of 300Hz, MRVE timecourses could be calculated for all frequencies considered here, as well as for = 300Hz, 100Hz, 60Hz etc. While most of the functional connectivity information given by AEC was found at frequencies below 30Hz, valid connections were detected using MRVE correlation across the whole bandwidth of the MEG signals. Both the frontal and posterior patterns of connectivity detected by MRVE correlation were observed across a wider range of frequencies than their AEC analogues. It is unclear why this is the case. However, this suggests that by increasing the sample rate of the MEG recordings, it may be possible to observe robust connectivity using MRVE correlation at scale frequencies beyond the range available here. In future work, the sample rate and scale factors could also be selected to target specific frequencies of interest.
Leakage correction has shown to be important for measuring reliable AEC (Colclough et al., 2016) and was performed here using symmetric multivariate orthogonalisation. This method has been shown to minimise spurious correlation between virtual sensor timecourses (Colclough et al., 2015). However, the performance of any leakage correction method is dependent on the choice of the timecourses to represents each AAL region. In this study, the voxel corresponding to the timecourse with the maximum temporal standard deviation was chosen as an estimate of the voxel exhibiting the largest SNR. This method could lead to voxels selected from adjacent AAL parcels being in close proximity to each other, and therefore the corresponding current time-courses at these locations could show real correlation (beyond spurious correlation due to source leakage). Any signal orthogonalisation method, including the one used here, would result in signal cancellation in the case of being presented with signals with such zero-lag correlation (Colclough et al., 2015). However, it is worth noting that even if signal components with zero-lag correlation are suppressed, it is still possible to observe correlation between the amplitude envelopes and the MRVE of signals with a relative phase difference.
While the issue of voxels selected in close proximity would affect AEC and MRVE correlation measurements equally, another limitation of this leakage correction method is that a bias towards signals with high SNR may led to missing important information about entropy. For AEC, maximising SNR may be desirable as oscillatory amplitude has been shown to correlate with functional connectivity (Tewarie et al., 2019). Whereas the MRVE of a signal is independent of its amplitude. Selecting only signals with high amplitude may increase the chances of selecting those with low entropy, as larger groups of synchronised neurons are capable of generating MEG signals with higher amplitude. This could have lead to increased similarity between MRVE correlation networks and those found using AEC. It may be interesting to employ an alternative voxel selection method, that selects voxels on a basis other than SNR, to investigate how this alters the measured MRVE correlation. For example, timecourses could be taken from voxels at the centre of each AAL region.
It is well established that neuronal variability varies with age (Lippé, Kovacevic, Mcintosh, 2009, Mcintosh, Kovacevic, Itier, 2008, McIntosh, Vakorin, Kovacevic, Wang, Diaconescu, Protzner, 2014, Vakorin, Lippe, McIntosh, 2011). Functional network activity has also been found to vary over the lifespan, increasing during development (Brookes, Groom, Liuzzi, Hill, Smith, Briley, Hall, Hunt, Gascoyne, Taylor, Liddle, Morris, Woolrich, Liddle, 2018, Schäfer, Morgan, Ye, Taylor, Doesburg, 2014), and then being disrupted in healthy aging (Andrews-hanna, Snyder, Vincent, Lustig, Head, Raichle, Buckner, 2007, Schlee, Leirer, Kolassa, Weisz, Elbert, 2012, Vakorin, Lippe, McIntosh, 2011). It may be beneficial to investigate the effects of age on MRVE correlation connectivity profiles, to determine whether they remain consistent between age groups. However, the age distribution of the cohort used here was skewed towards younger participants, where almost 70% of participants (126/183) were in the 18–25 age range. This limited our ability to assess the effects of age on the results presented here. In addition, resting state functional connectivity has previously been shown to differ between the sexes (Weis et al., 2019). However, the participant cohort used here was mostly female (123/183). It is possible that connectivity profiles given by both measures may be less robust when applied to a cohort with more even distributions of age and sex. Although, one MEG study found that resting state power envelope correlation connectomes did not significantly alter with age (Coquelet et al., 2017). Future work could recruit a cohort with more balanced distributions of age and sex to investigate their effects on the reliability of these connectivity measures.
While it is interesting that MRVE correlation has shown promise as a measure of functional connectivity, the true test of its usefulness will be its performance in patient groups. Neural variability measures such as Multi-scale Entropy (MSE) (Bosl, Tierney, Tager-flusberg, Nelson, 2011, Costa, Goldberger, Peng, 2005, Ghanbari, Bloy, Edgar, Blaskey, Verma, Roberts, 2015, Mizuno, Takahashi, Cho, Kikuchi, Murata, Takahashi, Wada, 2010), and AEC connectivity (Andreou, Nolte, Leicht, Polomac, Hanganu-opatz, Lambert, Engel, Mulert, 2015, Dima, Adams, Linden, Baird, Smith, Foley, Perry, Routley, Magazzini, Drakesmith, Williams, Doherty, van den Bree, Owen, Hall, Linden, Singh, 2020, Koelewijn, Hamandi, Brindley, Brookes, Routley, Muthukumaraswamy, Williams, Thomas, Kirby, te Water Naudé, Gibbon, Singh, 2015, Koelewijn, Lancaster, Linden, Dima, Bethany, Magazzini, Barawi, Brindley, Adams, Tansey, Bompas, Tales, Bayer, Singh, 2019) have both been shown to be able to distinguish patient groups from controls. Future work will investigate whether MRVE correlation can provide understanding about connectivity changes associated with disease, in comparison to conventional measures based on the oscillatory components of brain function.
CRediT authorship contribution statement
Megan Godfrey: Conceptualization, Methodology, Software, Formal analysis, Writing - original draft, Visualization. Krish D. Singh: Conceptualization, Methodology, Software, Resources, Writing - review & editing, Supervision.
Acknowledgements
This research was supported by CUBRIC and the School of Psychology at Cardiff University, the UK MEG Partnership Grant (MRC/EPSRC, MR/K005464/1) and EPSRC studentship funding to Godfrey Data access statement. Information on the data underpinning the results presented here, including how to access them, can be found in the Cardiff University data catalogue at https://doi.org/10.17035/d.2020.0120255913.
Footnotes
Supplementary material associated with this article can be found, in the online version, at 10.1016/j.neuroimage.2020.117551
Contributor Information
Megan Godfrey, Email: GodfreyM@cardiff.ac.uk.
Krish D. Singh, Email: SinghKD@cardiff.ac.uk.
Appendix A. Supplementary materials
References
- Andreou C., Nolte G., Leicht G., Polomac N., Hanganu-opatz I.L., Lambert M., Engel A.K., Mulert C. Increased resting-State gamma-Band connectivity in first-Episode schizophrenia. Schizophr. Bull. 2015;41(4):930–939. doi: 10.1093/schbul/sbu121. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Andrews-hanna J.R., Snyder A.Z., Vincent J.L., Lustig C., Head D., Raichle M.E., Buckner R.L. Disruption of large-Scale brain systems in advanced aging. Neuron. 2007;56(5):924–935. doi: 10.1016/j.neuron.2007.10.038.Disruption. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Baker A.P., Brookes M.J., Rezek I.A., Smith S.M., Behrens T., Smith P.J.P., Woolrich M. Fast transient networks in spontaneous human brain activity. Elife. 2014;3:1–18. doi: 10.7554/eLife.01867. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Boon L.I., Hillebrand A., Olde Dubbelink K.T.E., Stam C.J., Berendse H.W. Changes in resting-state directed connectivity in cortico-subcortical networks correlate with cognitive function in Parkinson’s disease. Clinical Neurophysiology. 2017;128:1319–1326. doi: 10.1016/j.clinph.2017.04.024. [DOI] [PubMed] [Google Scholar]
- Bosl W., Tierney A., Tager-flusberg H., Nelson C. EEG Complexity as a biomarker for autism spectrum disorder risk. BMC Med. 2011;9(18):1–16. doi: 10.1186/1741-7015-9-18. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brookes M.J., Groom M.J., Liuzzi L., Hill R.M., Smith H.J.F., Briley P.M., Hall E.L., Hunt B.A.E., Gascoyne L.E., Taylor M.J., Liddle P.F., Morris P.G., Woolrich M.W., Liddle E.B. Altered temporal stability in dynamic neural networks underlies connectivity changes in neurodevelopment. Neuroimage. 2018;174:563–575. doi: 10.1016/j.neuroimage.2018.03.008. [DOI] [PubMed] [Google Scholar]
- Brookes M.J., Hall E.L., Robson S.E., Price D., Palaniyappan L., Liddle E.B., Liddle P.F., Robinson S.E., Morris P.G. Complexity measures in magnetoencephalography: measuring ”disorder” in schizophrenia. PLoS ONE. 2015;10(4) doi: 10.1371/journal.pone.0120991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brookes M.J., Tewarie P.K., Hunt B.A.E., Robson S.E., Gascoyne L.E., Liddle E.B., Liddle P.F., Morris P.G. A multi-layer network approach to MEG connectivity analysis. Neuroimage. 2016;132:425–438. doi: 10.1016/j.neuroimage.2016.02.045. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brookes M.J., Woolrich M., Luckhoo H., Price D., Hale J.R., Stephenson M.C., Barnes G.R., Smith S.M., Morris P.G. Investigating the electrophysiological basis of resting state networks using magnetoencephalography. PNAS. 2011;108(40):16783–16788. doi: 10.1073/pnas.1112685108. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cabral J., Luckhoo H., Woolrich M., Joensson M., Mohseni H., Baker A., Kringelbach M.L., Deco G. Exploring mechanisms of spontaneous functional connectivity in MEG: how delayed network interactions lead to structured amplitude envelopes of band-pass filtered oscillations. Neuroimage. 2014;90:423–435. doi: 10.1016/j.neuroimage.2013.11.047. [DOI] [PubMed] [Google Scholar]
- Calkins M.E., Iacono W.G., Ones D.S. Eye movement dysfunction in first-Degree relatives of patients with schizophrenia: A Meta-analytic evaluation of candidate endophenotypes. Brain Cogn. 2008;68(3):436–461. doi: 10.1016/j.bandc.2008.09.001.Eye. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Colclough G.L., Brookes M.J., Smith S.M., Woolrich M.W. A symmetric multivariate leakage correction for MEG connectomes. Neuroimage. 2015;117 doi: 10.1016/j.neuroimage.2015.03.071. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Colclough G.L., Woolrich M.W., Tewarie P.K., Brookes M.J., Quinn A.J., Smith S.M. How reliable are MEG resting-state connectivity metrics? Neuroimage. 2016;138:284–293. doi: 10.1016/j.neuroimage.2016.05.070. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Coquelet N., Mary A., Peigneux P., Goldman S., Wens V., Tiège X.D. The electrophysiological connectome is maintained in healthy elders: a power envelope correlation MEG study. Sci. Rep. 2017;7(13984):1–10. doi: 10.1038/s41598-017-13829-8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Costa M., Goldberger A.L., Peng C.K. Multiscale entropy analysis of biological signals. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 2005;71(2):1–18. doi: 10.1103/PhysRevE.71.021906. [DOI] [PubMed] [Google Scholar]
- Courtiol J., Perdikis D., Petkoski S., Müller V., Huys R., Sleimen-Malkoun R., Jirsa V.K. The multiscale entropy: guidelines for use and interpretation in brain signal analysis. J. Neurosci. Methods. 2016;273(January 2017):175–190. doi: 10.1016/j.jneumeth.2016.09.004. [DOI] [PubMed] [Google Scholar]
- Deco G., Jirsa V.K., McIntosh A.R. Emerging concepts for the dynamical organization of resting-state activity in the brain. Nat. Rev. Neurosci. 2011;12(1):43–56. doi: 10.1038/nrn2961. [DOI] [PubMed] [Google Scholar]
- Dima D.C., Adams R., Linden S.C., Baird A., Smith J., Foley S., Perry G., Routley B.C., Magazzini L., Drakesmith M., Williams N., Doherty J., van den Bree M.B.M., Owen M.J., Hall J., Linden D.E.J., Singh K.D. Electrophysiological network alterations in adults with copy number variants associated with high neurodevelopmental risk. Transl. Psychiatry. 2020;10(324) doi: 10.1038/s41398-020-00998-w. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Donner T.H., Siegel M. A framework for local cortical oscillation patterns. Trends Cogn. Sci. (Regul. Ed.) 2011;15(5):191–199. doi: 10.1016/j.tics.2011.03.007. [DOI] [PubMed] [Google Scholar]
- Engels M.M.A., Yu M., Stam C.J., Gouw A.A., van der Flier W.M., Scheltens P., van Straaten E.C.W., Hillebrand A. Directional information flow in patients with Alzheimer’s disease. a source-space resting-state MEG study. Neuroimage. 2017;15:673–681. doi: 10.1016/j.nicl.2017.06.025. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fernández A., Gómez C., Hornero R., López-ibor J.J. Complexity and schizophrenia. Progress in Neuropsychopharmacology & Biological Psychiatry. 2013;45:267–276. doi: 10.1016/j.pnpbp.2012.03.015. [DOI] [PubMed] [Google Scholar]
- Fonov V.S., Evans A.C., McKinstry R.C., Almli C.R., Collins D.L. Unbiased nonlinear average age-appropriate brain templates from birth to adulthood. Neuroimage. 2009;47:S102. doi: 10.1016/S1053-8119(09)70884-5. [DOI] [Google Scholar]
- Fransson P., Flodin P., Öqvist Seimyr G., Pansell T. Slow fluctuations in eye position and resting-state functional magnetic resonance imaging brain activity during visual fixation. Cogn. Neurosci. 2014;40:3828–3835. doi: 10.1111/ejn.12745. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fries P. A mechanism for cognitive dynamics: neuronal communication through neuronal coherence. Trends Cogn. Sci. (Regul. Ed.) 2005;9(10):474–480. doi: 10.1016/j.tics.2005.08.011. [DOI] [PubMed] [Google Scholar]
- Friston K.J., Tononi G., Edelman G.M. Characterising the complexity of neuronal interactions. Hum. Brain Mapp. 1996;314(1995):302–314. [Google Scholar]
- Garrett D.D., Samanez-Larkin G.R., MacDonald S.W.S., Lindenberger U., McIntosh A.R., Grady C.L. Moment-to-moment brain signal variability: a next frontier in human brain mapping? Neurosci. Biobehav. Rev. 2013;37:610–624. doi: 10.1016/j.neubiorev.2013.02.015. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ghanbari Y., Bloy L., Edgar J.C., Blaskey L., Verma R., Roberts T.P.L. Joint analysis of band-Specific functional connectivity and signal complexity in autism. J. Autism Dev. Disord. 2015;45(2):444–460. doi: 10.1007/s10803-013-1915-7.Joint. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gorges M., Müller H.P., Lulé D., LANDSCAPE Consortium, Pinkhardt E.H., Ludolph A.C., Kassubek J. The association between alterations of eye movement control and cerebral intrinsic functional connectivity in Parkinson’s disease. Brain Imaging Behav. 2016;10:79–91. doi: 10.1007/s11682-015-9367-7. [DOI] [PubMed] [Google Scholar]
- Gorges M., Müller H.-P., Lulé D., Ludolph A.C., Pinkhardt E.H., Kassubek J. Functional connectivity within the default mode network is associated with saccadic accuracy in Parkinson’s disease: aresting-State fmri and videooculographic study. Brain Connect. 2013;3(3):265–272. doi: 10.1089/brain.2013.0146. [DOI] [PubMed] [Google Scholar]
- Hamandi K., Routley B.C., Koelewijn L., Singh K.D. Non-invasive brain mapping in epilepsy : applications from magnetoencephalography. J. Neurosci. Methods. 2016;260:283–291. doi: 10.1016/j.jneumeth.2015.11.012. [DOI] [PubMed] [Google Scholar]
- Hillebrand A., Barnes G.R., Bosboom J.L., Berendse H.W., Stam C.J. Frequency-dependent functional connectivity within resting-state networks: an atlas-based MEG beamformer solution. Neuroimage. 2012;59(4):3909–3921. doi: 10.1016/j.neuroimage.2011.11.005. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hipp J.F., Hawellek D.J., Corbetta M., Siegel M., Engel A.K. Large-scale cortical correlation structure of spontaneous oscillatory activity. Nat Neurosci. 2013;15(6) doi: 10.1038/nn.3101.Large-scale. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Huang M.X., Mosher J.C., Leahy R.M. A sensor-weighted overlapping-sphere head model and exhaustive head model comparison for MEG. Phys. Med. Biol. 1999;44:423–440. doi: 10.1088/0031-9155/44/2/010. [DOI] [PubMed] [Google Scholar]
- Koelewijn L., Hamandi K., Brindley L.M., Brookes M.J., Routley B.C., Muthukumaraswamy S.D., Williams N., Thomas M.A., Kirby A., te Water Naudé J., Gibbon F., Singh K.D. Resting-state oscillatory dynamics in sensorimotor cortex in benign epilepsy with centro-temporal spikes and typical brain development. Hum. Brain Mapp. 2015;36:3935–3949. doi: 10.1002/hbm.22888. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Koelewijn L., Lancaster T.M., Linden D.E.J., Dima D.C., Bethany C., Magazzini L., Barawi K., Brindley L., Adams R., Tansey K.E., Bompas A., Tales A., Bayer A., Singh K. Oscillatory hyperactivity and hyperconnectivity in young APOE -epsilon4 carriers and hypoconnectivity in Alzheimer’s disease. Elife. 2019;30(8) doi: 10.7554/eLife.36011. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lee M.H., Smyser C.D., Shimony J.S. Resting state fmri: a review of methods and clinical applications. American Journal of Neuroradiology. 2013;34(10):1866–1872. doi: 10.3174/ajnr.A3263.Resting. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lippé S., Kovacevic N., Mcintosh A.R. Differential maturation of brain signal complexity in the human auditory and visual system. Front Hum Neurosci. 2009;3(48):1–9. doi: 10.3389/neuro.09.048.2009. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liuzzi L., Gascoyne L.E., Tewarie P.K., Barratt E.L., Boto E., Brookes M.J. Optimising experimental design for MEG resting state functional connectivity measurement. Neuroimage. 2017;155:565–576. doi: 10.1016/j.neuroimage.2016.11.064. [DOI] [PubMed] [Google Scholar]
- Mateos D.M., Guevara Erra R., Wennberg R., Perez Velazquez J.L. Measures of entropy and complexity in altered states of consciousness. Cogn. Neurodyn. 2018;12:73–84. doi: 10.1007/s11571-017-9459-8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mcdonough I.M., Nashiro K., Gorgolewski K., Planck M. Network complexity as a measure of information processing across resting-state networks: evidence from the human connectome project. Front. Hum. Neurosci. 2014;8(June):1–15. doi: 10.3389/fnhum.2014.00409. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mcintosh A.R., Kovacevic N., Itier R.J. Increased brain signal variability accompanies lower behavioral variability in development. PLoS Comput. Biol. 2008;4(7) doi: 10.1371/journal.pcbi.1000106. [DOI] [PMC free article] [PubMed] [Google Scholar]
- McIntosh A.R., Vakorin V., Kovacevic N., Wang H., Diaconescu A., Protzner A.B. Spatiotemporal dependency of age-related changes in brain signal variability. Cerebral Cortex. 2014;24(7):1806–1817. doi: 10.1093/cercor/bht030. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mišić B., Vakorin V.A., Paus T., McIntosh A.R. Functional embedding predicts the variability of neural activity. Front. Syst. Neurosci. 2011;5:1–6. doi: 10.3389/fnsys.2011.00090. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mizuno T., Takahashi T., Cho R.Y., Kikuchi M., Murata T., Takahashi K., Wada Y. Assessment of EEG dynamical complexity in Alzheimer’s disease using multiscale entropy. Clinical Neurophysiology. 2010;121(9):1438–1446. doi: 10.1016/J.CLINPH.2010.03.025. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Monge J., Gómez C., Poza J., Fernández A., Quintero J., Hornero R. MEG Analysis of neural dynamics in attention-deficit/hyperactivity disorder with fuzzy entropy. Medical Engineering and Physics. 2015;37:416–423. doi: 10.1016/j.medengphy.2015.02.006. [DOI] [PubMed] [Google Scholar]
- O’Neill G.C., Tewarie P., Vidaurre D., Liuzzi L., Woolrich M.W., Brookes M.J. Dynamics of large-scale electrophysiological networks: a technical review. Neuroimage. 2017 doi: 10.1016/j.neuroimage.2017.10.003. [DOI] [PubMed] [Google Scholar]
- Oostenveld R., Fries P., Maris E., Schoffelen J.-M. Fieldtrip: open source software for advanced analysis of MEG, EEG, and invasive electrophysiological data. Comput. Intell. Neurosci. 2011;2011:1–9. doi: 10.1155/2011/156869. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Protzner A.B., Valiante T.A., Kovacevic N., McCormick C., McAndrews M.P. Hippocampal signal complexity in mesial temporal lobe epilepsy: a noisy brain is a healthy brain. Arch. Ital. Biol. 2010;148(3):289–297. [PubMed] [Google Scholar]
- Robinson S.E., Mandell A.J., Coppola R., Robinson P., Ermentrout G.B., Herrmann J.M. Spatiotemporal imaging of complexity. Front. Comput. Neurosci. 2013;6:101–114. doi: 10.3389/fncom.2012.00101. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schäfer C.B., Morgan B.R., Ye A.X., Taylor M.J., Doesburg S.M. Oscillations, networks, and their development: MEG connectivity changes with age. Hum. Brain Mapp. 2014;35:5249–5261. doi: 10.1002/hbm.22547. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schlee W., Leirer V., Kolassa I.-t., Weisz N., Elbert T. Age-related changes in neural functional connectivity and its behavioral relevance. BMC Neurosci. 2012;13(16):1–11. doi: 10.1186/1471-2202-13-16. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schnitzler A., Gross J. Normal and pathological oscillatory communication in the brain. Nat. Rev. Neurosci. 2005;6:285–296. doi: 10.1038/nrn1650. [DOI] [PubMed] [Google Scholar]
- Shannon C.E. A mathematical theory of communication. Bell System Technical Journal. 1948;27:379–423. [Google Scholar]
- Takahashi T. Complexity of spontaneous brain activity in mental disorders. Prog. Neuro-Psychopharmacol. Biol. Psychiatry. 2013;45:258–266. doi: 10.1016/j.pnpbp.2012.05.001. [DOI] [PubMed] [Google Scholar]
- Tewarie P., Hunt B.A.E., Neill G.C.O., Byrne A., Aquino K., Bauer M., Mullinger K.J., Coombes S., Brookes M.J. Relationships between neuronal oscillatory amplitude and dynamic functional connectivity. Cerebral Cortex. 2019;29:2668–2681. doi: 10.1093/cercor/bhy136. [DOI] [PubMed] [Google Scholar]
- Tononi G., Sporns O., Edelman G.M. A measure for brain complexity: relating functional segregation and integration in the nervous system. Neurobiology. 1994;91:5033–5037. doi: 10.1073/pnas.91.11.5033. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tzourio-Mazoyer N., Landeau B., Papathanassiou D., Crivello F., Etard O., Delcroix N., Mazoyer B., Joliot M. Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-Subject brain. Neuroimage. 2002;15:273–289. doi: 10.1006/nimg.2001.0978. [DOI] [PubMed] [Google Scholar]
- Vakorin V.A., Lippe S., McIntosh A.R. Variability of brain signals processed locally transforms into higher connectivity with brain development. J. Neurosci. 2011;31(17):6405–6413. doi: 10.1523/jneurosci.3153-10.2011. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Van Dellen E., Douw L., Hillebrand A., de Witt Hamer P.C., Baayen J.C., Heimans J.J., Reijneveld J.C., Stam C.J. Epilepsy surgery outcome and functional network alterations in longitudinal MEG: a minimum spanning tree analysis. Neuroimage. 2014;86:354–363. doi: 10.1016/j.neuroimage.2013.10.010. [DOI] [PubMed] [Google Scholar]
- Van Veen B.D., Van Drongelen W., Yuchtman M., Suzuki A. Localization of brain electrical activity via linearly constrained minimum variance spatial filtering. IEEE Trans. Biomed. Eng. 1997;44(9) doi: 10.1109/10.623056. [DOI] [PubMed] [Google Scholar]
- Vrba J., Robinson S.E. Signal processing in magnetoencephalography. Methods. 2001;25(2):249–271. doi: 10.1006/METH.2001.1238. [DOI] [PubMed] [Google Scholar]
- Wang D.J., Jann K., Fan C., Qiao Y., Zang Y.F., Lu H., Yang Y. Neurophysiological basis of multi-scale entropy of brain complexity and its relationship with functional connectivity. Front. Neurosci. 2018;12:1–14. doi: 10.3389/fnins.2018.00352. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Weis S., Hodgetts S., Hausmann M. Sex differences and menstrual cycle effects in cognitive and sensory resting state networks. Brain Cogn. 2019;131:66–73. doi: 10.1016/j.bandc.2017.09.003. [DOI] [PubMed] [Google Scholar]
- Wens V., Bourguignon M., Goldman S., Marty B., de Beeck M.O., Clumeck C., Mary A., Peigneux P., Van Bogaert P., Brookes M.J., De Tiege X. Inter- and intra-Subject variability of neuromagnetic resting state networks. Brain Topogr. 2014;27:620–634. doi: 10.1007/s10548-014-0364-8. [DOI] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.