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. 2021 Jan 18;8(2):ofab020. doi: 10.1093/ofid/ofab020

Health Care Providers’ Testing Practices for Coccidioidomycosis and Histoplasmosis in Patients With Community-Acquired Pneumonia—United States, 2020

Kaitlin Benedict 1,, Yiman Li 1, Noelle Angelique M Molinari 1, Brendan R Jackson 1
PMCID: PMC7863869  PMID: 33575429

Abstract

Laboratory testing is required to distinguish coccidioidomycosis and histoplasmosis from other types of community-acquired pneumonia (CAP). In this nationwide survey of 1258 health care providers, only 3.7% reported frequently testing CAP patients for coccidioidomycosis and 2.8% for histoplasmosis. These diseases are likely underdiagnosed, and increased awareness is needed.

Keywords: coccidioidomycosis, histoplasmosis, pneumonia, primary health care, United States


Inhalation of the fungal pathogens Coccidioides and Histoplasma can result in a wide range of illnesses, ranging from subclinical infection to life-threatening disseminated disease. Community-acquired pneumonia (CAP) is a common illness caused by various pathogens [1, 2] and is a frequent presentation for coccidioidomycosis and histoplasmosis. Because the clinical features of coccidioidomycosis and histoplasmosis can resemble those of other pneumonias, these diseases are often misdiagnosed and inappropriately treated with antibacterial medications [3]. Many coccidioidomycosis and histoplasmosis patients first present to primary care providers (PCPs) but experience delays of several weeks before being tested by infectious disease or pulmonary specialists [4, 5]. Such diagnostic delays contribute to increased health care costs and poorer patient outcomes [6, 7].

In the United States, coccidioidomycosis is most common in Arizona and California and histoplasmosis in the Midwest and South, but both diseases have broad endemic regions, and travel-associated cases occur regularly. Previous health care provider (HCP) surveys have examined coccidioidomycosis testing practices in Arizona and Washington State [8, 9], but the topic has not been assessed nationwide, and no similar data exist for histoplasmosis. To inform strategies to improve HCP awareness of coccidioidomycosis and histoplasmosis, we assessed self-reported testing frequency and HCP-related features associated with testing for these diseases among CAP patients.

METHODS

We used data from the Spring 2020 DocStyles survey, a web-based survey of primary care physicians, obstetricians and gynecologists (OB/GYNs), pediatricians, nurse practitioners, and physician assistants. The survey was commissioned by Porter Novelli Public Services, a public relations firm, and conducted by SERMO, a global market research company. Respondents were screened to include only HCPs actively seeing patients in the United States and practicing for at least 3 years. Porter Novelli developed the survey instrument with guidance from federal public health agencies and other clients. The survey aimed to evaluate HCPs’ attitudes and practices for various health conditions and to assess their use of medical information and continuing education sources. We asked 2 questions about HCPs’ (excluding OB/GYNs and pediatricians) testing practices: “How often do you test for [coccidioidomycosis (1) or histoplasmosis (2)] in patients with community-acquired pneumonia (CAP)?” Response options were “frequently,” “sometimes,” “rarely,” “never,” and “I do not see patients with CAP.”

We performed descriptive analyses and Type 3 likelihood ratio tests to select demographic features and information-seeking behaviors associated with testing frequency. Multivariable ordered logistic regression was used to estimate adjusted odds ratios (aORs) and 95% confidence intervals. Analyses were conducted using SAS (version 9.4; SAS Institute). Because no personally identifiable information was used during this analysis of data collected by Porter Novelli, the analysis was not subject to review by CDC’s institutional review board.

RESULTS

Of 2620 HCPs surveyed, 1760 (67.2%) completed the survey, and 1258 were asked the fungal disease testing questions. Of the 1258, most were internists (45.2%) or family practice physicians (34.8%), and 83.0% worked primarily in outpatient settings (PCPs). The mean number of years in practice was 15.3.

Overall, 3.7% reported “frequently” and 15.0% reported “sometimes” testing CAP patients for coccidioidomycosis (Table 1). Among 43 HCPs in Arizona, 32.4% reported “frequently” and 38.2% reported “sometimes” testing for coccidioidomycosis; among 148 HCPs in California, 7.4% reported “frequently” testing, and 29.7% reported “sometimes” testing. Nationwide, 2.8% of HCPs reported “frequently” testing for histoplasmosis, and 19.0% reported “sometimes” testing.

Table 1.

Health Care Providers’ Self-Reported Testing Frequency for Coccidioidomycosis and Histoplasmosis Among Community-Acquired Pneumonia Patients, United States, 2020

Coccidioidomycosis, No. (%) Histoplasmosis, No. (%)
Frequently 47 (3.7) 35 (2.8)
Sometimes 189 (15.0) 239 (19.0)
Rarely 488 (38.8) 527 (41.9)
Never 435 (34.6) 364 (28.9)
I do not see patients with CAP 99 (7.9) 93 (7.4)

Abbreviation: CAP, community-acquired pneumonia.

For coccidioidomycosis, the odds of more frequent testing were 36% higher among internists compared with family practice providers (aOR, 1.36; 95% CI, 1.04–1.77) and were 72% higher among HCPs who identified as “other” race compared with White (aOR, 1.72; 95% CI, 1.12–2.65) (Table 2). Higher odds of more frequent testing for coccidioidomycosis and histoplasmosis occurred among HCPs in the West (aOR, 5.17; 95% CI, 3.64–7.35; aOR, 1.53; 95% CI, 1.09–2.15) and the Midwest (aOR, 1.61; 95% CI, 1.15–2.25; aOR, 1.69; 95% CI, 1.22–2.34) compared with the Northeast. Higher odds of more frequent testing also occurred among HCPs with teaching hospital privileges (aOR, 1.54; 95% CI, 1.20–1.98; aOR, 1.49; 95% CI, 1.17–1.89) and those who primarily worked in an inpatient setting (aOR, 1.52; 95% CI, 1.09–2.11; aOR, 2.03; 95% CI, 1.46–2.81), compared with a group outpatient practice setting.

Table 2.

Health Care Provider–Related Factors Associated With Frequently Testing Community-Acquired Pneumonia Patients for Coccidioidomycosis and Histoplasmosis, United States, 2020

Coccidioidomycosis Histoplasmosis
No. (%) (total n = 1258) aOR 95% CI Type 3 χ 2  P Valuea aOR 95% CI Type 3 χ 2   P Valuea
Demographic characteristics
Mean age (SD), y 45 (11.1) 1.01 0.99–1.02 .4050 1.00 0.99–1.01 .6892
Female 455 (36.2) 0.88 0.68–1.15 .3503 0.98 0.76–1.27 .8701
Hispanic 66 (5.2) 1.10 0.67–1.80 .7033 1.28 0.78–2.08 .3272
Race .0239 .4324
 White 862 (68.5) Ref Ref Ref Ref
 Black 38 (3.0) 0.62 0.31–1.23 0.65 0.33–1.25
 Asian 268 (21.3) 1.22 0.92–1.61 1.02 0.77–1.35
 Otherb 90 (7.2) 1.72 1.12–2.65 1.23 0.80–1.90
Region <.0001 .0116
 Northeast 281 (22.3) Ref Ref Ref Ref
 Midwest 292 (23.2) 1.61 1.15–2.25 1.69 1.22–2.34
 South 427 (33.9) 1.34 0.97–1.83 1.32 0.97–1.79
 West 258 (20.5) 5.17 3.64–7.35 1.53 1.09–2.15
Practice characteristics
Provider specialty .0052 .0511
 Family practice 438 (34.8) Ref Ref Ref Ref
 Internist 569 (45.2) 1.36 1.04–1.77 1.25 0.96–1.63
 Nurse practitioner 129 (10.3) 0.73 0.47–1.13 1.02 0.67–1.55
 Physician assistant 122 (9.7) 0.72 0.46–1.12 0.70 0.45–1.08
Patients per week 106.9 (70.6) 1.00 1.00–1.01 .0002 1.00 1.00-1.00
Teaching hospital privileges 567 (45.1) 1.54 1.20–1.98 .0006 1.49 1.17–1.89 .0014
Practice setting .0299 <.0001
 Group outpatient practice 844 (67.1) Ref Ref Ref Ref
 Individual outpatient practice 201 (15.9) 1.23 0.90–1.68 1.06 0.78–1.44
 Inpatient practice 213 (16.9) 1.52 1.09–2.11 2.03 1.46–2.81
Medical news sources, mean frequency (SD)c
Books 2.8 (1.0) 1.38 1.22–1.55 <.0001 1.42 1.26–1.59 <.0001
Government health agencies 3.5 (1.0) 1.05 0.92–1.21 .4793 1.05 0.92–1.21 .4684
Pharmaceutical companies/representatives 2.9 (1.1) 1.27 1.14–1.42 <.0001 1.32 1.18–1.47 <.0001
Medical websites 4.0 (0.9) 0.97 0.84–1.12 .6971 0.96 0.84–1.11 .5819
Magazine stories/articles 2.9 (1.0) 1.02 0.90–1.15 .8029 0.91 0.81–1.03 .1448
Medical journals 3.9 (0.9) 1.14 0.98–1.32 .0806 1.19 1.03–1.37 .0189
Newspaper stories/articles 2.9 (1.0) 1.08 0.95–1.23 .2583 1.11 0.98–1.26 .1031
Physicians 4.0 (0.9) 0.96 0.83–1.1 .5303 1.08 0.94–1.24 .2900
Professional medical societies 3.5 (1.0) 1.18 1.04–1.35 .0130 1.18 1.03–1.34 .0137
Search engines 3.8 (1.0) 0.84 0.74–0.96 .0073 0.85 0.75–0.96 .0078
Social media 3.0 (1.2) 1.09 0.98–1.22 .1297 1.07 0.96–1.20 .2115
Mobile applications 3.6 (1.1) 1.12 1.00–1.26 .0517 1.09 0.97–1.21 .1566
Continuing medical education sourcesd
Internet sites 813 (64.6) 0.78 0.61–0.99 .0435 0.92 0.73–1.17 .5152
Conferences 862 (68.5) 1.11 0.87–1.43 .4035 0.98 0.77–1.26 .8907
Journals 860 (68.4) 0.67 0.52–0.86 .0020 0.75 0.58–0.97 .0261
Government health agencies 531 (42.2) 1.21 0.95–1.55 .1283 1.12 0.88–1.42 .3606
Classes 372 (29.6) 1.13 0.88–1.44 .3460 0.95 0.75–1.21 .6828
CD-ROM 58 (4.6) 2.13 1.28–3.55 .0038 3.77 2.24–6.32 <.0001
Medical podcasts 460 (36.6) 1.04 0.82–1.32 .7538 1.13 0.89–1.43 .3078
Something else not listed 83 (6.6) 0.89 0.57–1.4 .6088 0.94 0.61–1.46 .7949
No CME in the past year 16 (1.3) 0.35 0.12–1.09 .0692 0.88 0.31–2.45 .7993
Likelihood ratio test for global beta = 0e 354.43 298.68

aORs correspond to ordered logistic regression for the answer choices “frequently,” “sometimes,” “rarely,” and “never/I do not see patients with CAP” and represent the odds of more frequent testing associated with a 1-unit change in the explanatory variable, controlling for all other explanatory variables. Additional factors evaluated in bivariate analyses but not included in the final models include years practicing medicine, number of providers in group practice, telemedicine use, social media use, email use for communication with patients, and approximate household income of most patients. The ordered logistic regression assumes proportional odds, that is, that the slopes between testing frequencies are constant across the range of testing frequencies. This assumption is violated here, but comparison with multinomial results did not reveal differences in slope signs or substantial differences in magnitude.

Abbreviations: aOR, adjusted odds ratio; CAP, community-acquired pneumonia; CME, continuing medical education.

aType 3 likelihood ratio test, used to select variables for inclusion in the analyses, evaluates overall contribution of each explanatory variable to the model fit. The null hypothesis is that the marginal contribution is 0.

b“Other” = “Native Hawaiian or other Pacific Islander,” “American Indian or Alaska Native,” “2 or more races,” or “other race.”

cMean and standard deviation correspond to values for the question “How often do you use each of the following to keep up to date with the latest medical news and trends?” with answer choices “never = 1,” “rarely = 2,” “sometimes = 3,” “often = 4,” and “regularly = 5.”

dPercentage of participants who responded “yes” to each source for the question “Which of the following sources have you used to pursue continuing medical education in the past year?”

eThe likelihood ratio test with 37 degrees of freedom tests the global null hypothesis that global BETA = 0. Reject for both ordered logistic regressions with P < .0001.

Sources of medical information most strongly associated with more frequent testing for coccidioidomycosis and histoplasmosis included books (aOR, 1.38; 95% CI, 1.22–1.55; aOR, 1.42; 95% CI, 1.26–1.59), pharmaceutical companies and representatives (aOR, 1.27; 95% CI, 1.14–1.42; aOR, 1.32; 95% CI, 1.18–1.47), and medical journals (aOR, 1.14; 95% CI, 0.98–1.32; aOR, 1.19; 95% CI, 1.03–1.37). Not having participated in any continuing medical education activities in the past year was not associated with testing frequency.

DISCUSSION

Testing for coccidioidomycosis and histoplasmosis among patients with CAP was low in this nationwide survey of primarily PCPs, adding to evidence that coccidioidomycosis and histoplasmosis are likely widely underdiagnosed. Factors associated with testing frequency appeared to reflect the patient population rather than provider-related features. Overall, these results indicate that continued efforts to increase awareness of and testing for coccidioidomycosis and histoplasmosis are needed, particularly in the primary care setting, to help facilitate earlier diagnosis and treatment.

The low testing rates we observed might indicate that many HCPs are unaware of the importance of testing for coccidioidomycosis and histoplasmosis, which are frequently misdiagnosed and often cause prolonged illness [4, 5]. The American Thoracic Society (ATS)/Infectious Diseases Society of America (IDSA) guidelines for diagnosing CAP in adults do not explicitly recommend testing for endemic fungi, stating that they are uncommon pathogens in CAP [1]. The contribution of Coccidioides and Histoplasma relative to other CAP etiologies nationwide is not well established (a landmark study found no bacterial or viral pathogen in 62% of hospitalized CAP patients, raising the possibility that some unidentified pneumonias could be caused by fungal pathogens) [10]. However, the numbers of reported coccidioidomycosis cases (despite being reportable in only half of all states) are similar to legionellosis [11], for which the ATS/IDSA guidelines recommend testing in certain epidemiological circumstances and among patients with severe CAP. Newly developed ATS guidelines for diagnosing fungal infections provide important direction about serology and antigen testing, but the focus on pulmonary and critical care practice leaves a gap in guidance for other practice settings, potentially resulting in missed opportunities for earlier diagnosis [12].

The differences in testing by geographic region we observed are consistent with foci of histoplasmosis in the Midwest and coccidioidomycosis in the West, with higher testing rates in Arizona and California, the 2 states with the highest geographic risk for coccidioidomycosis. Similar to our results, a 2007 survey of Arizona HCPs found that 74% reported testing CAP patients for coccidioidomycosis at least 50% of the time and that testing frequency increased in highly endemic areas [8]. Although testing for coccidioidomycosis and histoplasmosis may not be warranted in all CAP patients, increased suspicion in areas where they are most common is warranted, along with periodic reevaluation of how these areas may have changed [13].

Factors influencing testing decisions are likely both patient- and provider-related. Previous analyses have identified CAP patient race/ethnicity and other demographic and clinical features associated with being tested for coccidioidomycosis [14]. This study adds insight into the role of provider features; aside from race, which may reflect providers’ awareness of their own risk [15] for coccidioidomycosis, personal features did not appear to influence testing frequency. Instead, higher odds of more frequent testing among internists, those with teaching hospital privileges, and those who work in the inpatient setting appear to reflect HCPs who care for more seriously ill patients. They may treat patients who initially present with more severe disease or those whose illness progressed after delayed diagnosis, although our study was not able to assess timing of fungal disease testing, and the data are limited to self-report rather than actual testing practices. Social desirability bias would suggest that testing occurs even less often than reported. This survey also did not collect information about test types or HCPs’ confidence in their ability to diagnose fungal diseases, which would be useful for a deeper understanding of testing practices. Future surveys could also evaluate testing for blastomycosis, another geographically focused disease that can cause CAP, as well as target HCPs who work in emergency medicine, another setting where coccidioidomycosis and histoplasmosis patients commonly first present for care [4, 5].

Nationwide, HCPs’ testing for coccidioidomycosis and histoplasmosis among CAP patients was low. More studies are needed to establish the true burden of these fungal diseases and fungal pneumonia compared with other causes of CAP, and CAP guideline developers could consider providing more specific guidance about fungal disease testing.

Acknowledgments

We thank Fred Fridinger, DrPH, in the CDC Office of the Associate Director for Communication, and Deanne Weber, PhD, Porter Novelli Public Services, Inc., for coordinating access to the DocStyles data.

Potential conflicts of interest. All authors declare no conflicts of interest. All authors: no reported conflicts of interest. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed.

Disclaimer. The findings and conclusions in this report are those of the authors and do not necessarily represent the official position of the Centers for Disease Control and Prevention.

Participant consent.This study does not include factors necessitating participant consent.

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