Table 4.
Strain | DDBJ/ENA/ GenBank Accession Number |
Number of Raw Reads | Coverage | Genome Size | Mol GC% | Contigs | N50 | Genes (Total) | tRNA | rRNA | SRA Accession no. |
---|---|---|---|---|---|---|---|---|---|---|---|
Heyndrickxia sporothermodurans ( basonym: Bacillus sporothermodurans) | |||||||||||
DSM 10599T short-reads | JAEKDY000000000 | 1,662,070 | 104.64× | 3,839,826 | 35.75 | 302 | 27,181 | 4032 | 96 | 33 | SRR13249535 |
DSM 10599T Hybrid assembly | CP066701 | 1,662,070 (Illumina) 232,544 (Nanopore) |
191.36× | 4,417,946 | 36.34 | 1 | 1 contig | 4554 | 99 | 30 | SRR13249535 (Illumina) SRR13347551 (Nanopore) |
M3420-12 | JABWUU000000000 | 1,214,420 | 82.24× | 3,580,829 | 35.93 | 291 | 25,466 | 3713 | 77 | 29 | SRR13249560 |
M5055-A | JABWUT000000000 | 1,160,538 | 77.17× | 3,662,309 | 36.01 | 348 | 20,956 | 3890 | 97 | 35 | SRR13249559 |
M5233-6 | JABWUS000000000 | 1,167,612 | 76.00× | 3,746,330 | 35.91 | 363 | 20,329 | 3910 | 79 | 30 | SRR13249548 |
M5311-1 | JABWUR000000000 | 1,211,006 | 81.10× | 3,615,469 | 35.85 | 346 | 20,889 | 3819 | 78 | 32 | SRR13249537 |
M5311-2 | JABWUQ000000000 | 1,205,508 | 82.18× | 3,550,370 | 35.83 | 333 | 20,966 | 3703 | 95 | 33 | SRR13249530 |
M5523-4 | JABWUP000000000 | 1,192,692 | 81.50× | 3,569,406 | 35.95 | 341 | 20,150 | 3719 | 81 | 31 | SRR13249529 |
M5530-17 | JABWUO000000000 | 1,196,538 | 81.52× | 3,576,306 | 35.94 | 338 | 20,329 | 3715 | 78 | 31 | SRR13249528 |
M5547-20 | JABWUN000000000 | 1,258,834 | 81.58× | 3,764,103 | 35.93 | 372 | 20,038 | 4025 | 97 | 33 | SRR13249527 |
M5547-25 | JABWUM000000000 | 1,551,052 | 106.16× | 3,534,820 | 35.91 | 342 | 20,854 | 3699 | 79 | 32 | SRR13249526 |
M5352-102 * | JABWTR000000000 | 1,673,766 | 120.90× | 3,376,234 | 35.88 | 332 | 20,219 | 3551 | 79 | 30 | SRR13249538 |
M5572-6 * | JABWTQ000000000 | 1,661,774 | 111.93× | 3,612,108 | 35.97 | 321 | 22,597 | 3780 | 97 | 33 | SRR13249536 |
L1_140 | JABWUJ000000000 | 1,300,432 | 82.43× | 3,817,614 | 35.79 | 310 | 30,062 | 4026 | 96 | 33 | SRR13249525 |
L1_141 | JABWUI000000000 | 1,281,714 | 84.40× | 3,684,244 | 35.79 | 319 | 24,263 | 3863 | 95 | 33 | SRR13249558 |
L1_142 | JABWUH000000000 | 1,265,780 | 82.99× | 3,677,671 | 35.75 | 326 | 28,594 | 3886 | 79 | 32 | SRR13249557 |
L1_143 | JABWUG000000000 | 1,361,164 | 89.88× | 3,676,925 | 35.84 | 315 | 25,507 | 3896 | 95 | 34 | SRR13249556 |
L1_144 | JABWUF000000000 | 1,446,376 | 90.58× | 3,857,917 | 35.81 | 339 | 25,432 | 4115 | 96 | 35 | SRR13249555 |
L1_145 | JABWUE000000000 | 1,142,112 | 72.70× | 3,811,445 | 35.83 | 326 | 25,433 | 4014 | 96 | 33 | SRR13249554 |
L1_146 | JABWUD000000000 | 1,476,620 | 93.85× | 3,826,729 | 35.82 | 351 | 24,470 | 4042 | 96 | 33 | SRR13249553 |
L1_149 | JABWUC000000000 | 1,468,760 | 92.28× | 3,886,000 | 35.84 | 336 | 23,762 | 4069 | 95 | 34 | SRR13249552 |
L1_150 | JABWUB000000000 | 1,232,426 | 80.78× | 3,698,569 | 35.86 | 317 | 25,508 | 3850 | 95 | 34 | SRR13249551 |
L1_151 | JABWUA000000000 | 1,390,644 | 93.45× | 3,628,299 | 35.85 | 320 | 26,528 | 3783 | 78 | 30 | SRR13249550 |
L1_152 | JABWTZ000000000 | 1,306,056 | 87.84× | 3,605,120 | 35.87 | 313 | 26,883 | 3748 | 78 | 32 | SRR13249549 |
L1_153 | JABWTY000000000 | 1,389,634 | 95.93× | 3,512,664 | 35.86 | 309 | 26,406 | 3694 | 78 | 32 | SRR13249547 |
L1_154 | JABWTX000000000 | 1,185,268 | 84.22× | 3,418,001 | 35.85 | 301 | 26,933 | 3548 | 77 | 32 | SRR13249546 |
L1_155 | JABWTW000000000 | 1,832,218 | 121.31× | 3,676,944 | 35.87 | 324 | 25,595 | 3843 | 96 | 33 | SRR13249545 |
L1_156 | JABWUL000000000 | 1,940,212 | 121.72× | 3,877,835 | 35.90 | 342 | 24,263 | 4023 | 97 | 33 | SRR13249544 |
L1_157 | JABWUK000000000 | 1,770,320 | 119.84× | 3,613,127 | 35.88 | 312 | 25,846 | 3751 | 78 | 31 | SRR13249543 |
L1_158 | JABWTV000000000 | 1,761,290 | 121.53× | 3,535,146 | 35.84 | 323 | 23,762 | 3687 | 77 | 32 | SRR13249542 |
L1_159 | JABWTU000000000 | 1,724,638 | 124.93× | 3,372,204 | 35.89 | 304 | 23,967 | 3484 | 77 | 32 | SRR13249541 |
L1_160 | JABWTT000000000 | 1,164,458 | 78.10× | 3,633,431 | 35.86 | 334 | 24,295 | 3754 | 80 | 34 | SRR13249540 |
L1_161 | JABWTS000000000 | 1,814,922 | 120.51× | 3,680,123 | 35.89 | 342 | 22,342 | 3785 | 78 | 31 | SRR13249539 |
* formerly H. vini (based on 16S) | |||||||||||
Heyndrickxia vini ( basonym: Bacillus vini) | |||||||||||
LAM0415T/ JCM 19841T Hybrid assembly |
CP065425 | 2,323,916 (Illumina) 145,000 (Nanopore) |
379× | 4,309,805 | 35.97 | 1 | circular | 4263 | 97 | 30 | SRR13249532 (Illumina) SRR13249531 (Nanopore) |
Heyndrickxia oleronia ( basonym: Bacillus oleronius) | |||||||||||
DSM 9356T Hybrid assembly | CP065424 | 1,700,898 (Illumina) 109,411 (Nanopore) |
282× | 5,198,760 | 35.13 | 1 | circular | 5186 | 145 | 36 | SRR13249534 (Illumina) SRR13249533 (Nanopore) |