Table 1. Assembly statistics of bamboo shark transcriptome.
| Characteristic | Bamboo shark transcriptome | Bamboo shark gene model (Hara et al., 2018) |
|---|---|---|
| Total number of sequences | 222015 | 34038 |
| Total sequence length (bp) | 195541367 | 36633751 |
| Average length (bp) | 880 | 1076 |
| Maximum length (bp) | 18451 | 108594 |
| N count | 0 | 10208 |
| L50 | 24765 | 5666 |
| N50 length (bp) | 2075 | 1749 |
| Protein coding | 63898 | 34038 |
| Orthology detected | 41633 | 18180 |
| Unique orthologs | 14139 | 14907 |
| Unique orthologs without gene symbols | 1821 | 1780 |
| Unique orthologs only in elephantfish | 826 | 552 |
| Sequences with no orthology | 20892 | 15254 |
| Orthologs with mouse genes | 12326 | 13005 |