Catalytic Asymmetric Synthesis of Unprotected β²-Amino Acids

Abstract

We report here a scalable, catalytic one-pot approach to enantiopure and unmodified β²-amino acids. A newly developed confined imidodiphosphorimidate (IDPi) catalyzes a broadly applicable reaction of diverse bis-silyl ketene acetals with a silylated aminomethyl ether, followed by hydrolytic workup, to give free β²-amino acids in high yields, purity, and enantioselectivity. Importantly, both aromatic and aliphatic β²-amino acids can be obtained using this method. Mechanistic studies are consistent with the aminomethylation to proceed via silylium-based asymmetric counteranion-directed catalysis (Si-ACDC) and a transition state to explain the enantioselectivity is suggested on the basis of density functional theory calculation.

Among the various classes of amino acids, β²-amino acids hold a particularly prominent place and occur in an increasing number of pharmaceuticals, natural products, and drug candidates.¹⁻¹¹ However, while chemists, in recent years, have delivered several methods toward the asymmetric synthesis of β²-amino acids,¹²⁻³⁹ catalytic approaches that directly deliver the free, unmodified amino acid, without requiring separate redox- or protecting group manipulations, to our knowledge, have not yet been developed. Our inspirational blueprint to address this challenge is a hypothetical chiral acid catalyzed direct three-component-Mannich reaction of carboxylic acids with formaldehyde and ammonia (eq 1).

1

Unfortunately, except with malonic acid derivatives and nonenantioselectively so,^40,41 such a “dream-reaction” has not yet been realized, arguably due to the current inability of chemists to catalytically enolize carboxylic acids.⁴²⁻⁴⁴ An attractive, even though less direct alternative would be a Mukaiyama-style reaction of preformed bis-silyl ketene acetals (bis-SKAs) with a formaldehyde imine equivalent. While this transformation has been described in a nonenantioselective fashion,⁴⁵ asymmetric versions are entirely unknown. Encouraged by our recent studies on silylium-based asymmetric counteranion-directed catalysis (Si-ACDC),⁴⁶⁻⁶⁶ we envisaged to apply this approach to a TMSX*-catalyzed reaction of bis-SKAs with a silylated aminomethyl ether, followed by hydrolytic workup and extraction, which should deliver the free, unmodified β²-amino acids and enable a simple catalyst HX* recovery (eq 2, X*^– = enaniopure counteranion). Here we report on the realization of this concept with a general and highly enantioselective imidodiphosphorimidate (IDPi) catalyzed Mukaiyama Mannich-type reaction that delivers free β²-amino acids with either aromatic or aliphatic substituents.

We chose α-benzyl bis-SKA 1a as our model substrate and commercially available α-aminomethyl ether 2a as methylene imine equivalent to initiate our studies (Table 1). An initial catalyst exploration revealed that moderately acidic Brønsted acids, such as chiral phosphoric acids (CPAs),^67,68 even upon warming, did not give any of the desired product, while imidodiphosphoric (IDP)⁶⁹ acids promoted the reaction at 0 °C to give racemic product (see the Supporting Information). In contrast, the much more acidic IDPi catalysts provided both sufficient reactivity and promising enantioselectivity (at −40 °C in toluene). Among our IDPi libraries, spirocyclopentyl-3-fluorenyl substituted catalysts 3 turned out to be particularly promising in terms of reactivity and enantioselectivity. Extending the perfluoroalkyl sulfonyl chains in the inner core further increased the enantioselectivity (entries 1–4). With catalyst 3d, temperature and solvent were further optimized. Lowering the temperature to −60 °C led to a slight increase in enantioselectivity (entry 5). Importantly, with pentane as the solvent instead of toluene, the enantiomeric ratio significantly increased (entry 6). Furthermore, we tested IDPi catalysts 3e–g, possessing an additional substituent at the fluorenyl group (entries 7–10). Ultimately, we identified the tert-butyl substituted IDPi catalyst 3h as the optimal one, giving an e.r. of 96:4 in almost quantitative yield (entry 10).

Table 1. Reaction Development^a.

^aReactions were conducted on a 0.02 mmol scale: 1a:2 = 1.2:1.

^bYields were determined by ¹H NMR using mesitylene as internal standard.

^cAfter simplified workup, enantiomeric ratios (e.r.) were measured by HPLC. See the Supporting Information for further information.

We also studied the effect of the aminomethyl source on the conversion and stereochemical outcome (entries 11–14). Different ethers 2 with varying leaving groups were examined. Interestingly, while the alkoxy group had only an insignificant effect on the enantiocontrol, isopropyl ether 2c gave only poor conversion at −60 °C (entries 10–12). These results are consistent with the absence of the leaving group of ether 2 in the enantiodetermining step and point toward an efficient association of the bis(silyl)iminium ion with the IDPi anion. This hypothesis could indeed be validated with a remarkably broad scope of both aromatic and aliphatic bis-SKAs (Table 2). Various free β²-amino acids with electronically and sterically diverse substituents were obtained in excellent yields and enantioselectivities. For example, bis-SKAs 1a–c with different methylene tether lengths between a phenyl group and carboxylic acid functionality afforded the desired products in similar excellent yields and enantioselectivities. Similarly, either electron-neutral or electron-donating groups at the β-phenyl ring of the bis-SKA gave the corresponding free β²-amino acids in >90% yields with around 95:5 e.r. (4d–e). Notably, β²-amino acids with electron-withdrawing groups (F, CF₃, Cl), either at the ortho-, meta-, or para-position of the β-phenyl ring were generated in >90% yield with higher enantioselectivities (>97:3 e.r.) (4f–j). Other substrates with aromatic and heteroaromatic groups, such as 1k with naphthyl and 1l bearing a thiophenyl substituent, were well tolerated, affording the aminomethylation products 4k and 4l in excellent yield and e.r..

Table 2. Substrate Scope^a.

^aReactions were conducted on a 0.2 mmol scale: 1:2a = 1.2:1. Isolated yields with e.r. measured by HPLC. For derivatization, see Supporting Information.

^be.r. measured by HPLC after derivatization.

^c3 mol % 3h. BzCl, benzoyl chloride; DCM, dichloromethane; TEA, triethylamine.

Directly aryl-substituted bis-SKAs 1m–q were also examined and proved to be slightly less reactive, requiring 3 mol % of catalyst 3h to furnish the corresponding products in moderate to good yields and excellent enantioselectivities.

The scope of this transformation also includes simple, aliphatic β²-amino acids. For example, bis-SKAs 1r–u, which were generated from propionic acid, butyric acid, valeric acid, and hexanoic acid, respectively, reacted smoothly, where the enantioselectivities increased with longer alkyl chains. Branched and cyclic alkyl groups (4v–x) and a methoxy- (4y) and an olefin-substituted alkyl chain (4z) were all tolerated and provided the desired products in good to excellent yields and enantioselectivity. Interestingly, the enantiopure bis-SKA 1A and its enantiomer ent-1A reacted to products 4A and 4B in good yields and, in both cases, featuring excellent and catalyst-controlled diastereoselectivity. Limitations of our method include the use of bis-silyl ketene acetals derived from α,α-disubstituted carboxylic acids and of C-substituted imine sources, which display reduced reactivity and lead to lower diastereoselectivity and enantioselectivity (see the Supporting Information).

The absolute configuration of our obtained β²-amino acids was determined from X-ray crystallographic analysis of products 4h, 4i, and 4j. Furthermore, bromoalkyl substituted bis-SKA 1C gave γ-aminobutyric acid uptake inhibitor (S)-(+)-nipecotic acid⁷⁰5 in a one-pot operation in 84% yield and 97:3 e.r. when treating the initial reaction product with triethylamine. The absolute configuration of amino acid 5 was determined by converting it to the corresponding benzamide 6, crystals of which were subjected to an X-ray crystallographic analysis. ¹H NMR investigation of the crude reaction mixture revealed the existence of silylated product 4C, confirming that cyclization occurs only upon base treatment. In fact, oligomers were detected with concomitant formation of a small amount of compound 5 if the reaction mixture was treated with only water. Instead, treatment with benzoyl chloride and aqueous potassium carbonate enabled the access to the corresponding α-amidomethylated δ-valerolactone 7.

The practicality of our method was illustrated with two scale-up experiments, involving an extremely concise product purification and catalyst recovery. Using 1 mol % of catalyst 3h, 12 mmol of bis-SKA 1a and 10 mmol of imine precursor 2a gave 1.77 g of the free β²-amino acid 4a in 99% isolated yield with an e.r. of 95.5:4.5. The workup of the reaction mixture included a simple extraction with water and washing with dichloromethane without further purification. Gratifyingly, catalyst 3h could be easily recovered in 96% yield from the organic phase via flash chromatography and acidification. Similarly, 2.84 g of the aliphatic free β²-amino acid 4u was obtained in 98% isolated yield with an e.r. of 95:5 from 20 mmol of reagent 2a using only 0.5 mol % of catalyst 3h, which was recovered in 95% yield from the organic phase after flash chromatography and acidification.

Optionally, the crude products can be readily derivatized in situ into a variety of synthetically useful building blocks such as the corresponding N-Boc- or N-Fmoc-protected β²-amino acids 8 and 9 by treating the reaction mixture with an appropriate derivatization reagent.

On the basis of the observation that the alkyl group of ethers 2 had an insignificant effect on the enantioselectivity (Table 1, entries 11–14), coupled with literature results,^45,58−66 we envision a catalytic cycle as shown in Figure 1a. Accordingly, the reaction commences with the in situ silylation of the IDPi catalyst 3 by bis-SKA 1 to furnish the N-silylated catalyst I and/or its diastereomeric O–Si-silatropomers.⁵⁸⁻⁶⁶ α-Aminomethyl ether 2 then reacts with catalyst I, generating the methylene iminium ion-IDPi anion pair II, simultaneously liberating TMSOMe.⁴⁵ Subsequently, bis-SKA 1 reacts with the cationic methylene iminium ion in the anionic catalyst pocket to give ion pair III. Intra-ion-pair silyl transfer from the cationic product back onto its counteranion then furnishes the silylated product IV and re-establishes the silylated catalyst I. Finally, hydrolytic workup and extraction of the reaction mixture delivers the free β²-amino acid 4. On the basis of a detailed conformational search and subsequent Density Functional Theory (DFT) optimization of ion pair II, we tentatively propose a sterical hindrance-based selectivity model (Figure 1b), where re-facial addition of bis-SKA 1 to methylene iminium-IDPi anion pair II leads to the observed enantiomer (see the Supporting Information).

Figure 1.

(a) Proposed catalytic cycle. (b) Suggested re-facial approach of the SKA onto the DFT optimized iminium-IDPi ion pair II.

We have developed a traceless and scalable approach to enantiopure free β²-amino acids via catalytic asymmetric aminomethylation of bis-silyl ketene acetals. A variety of aromatic and aliphatic bis-SKAs from carboxylic acids with diverse electronics and sterics were tolerated in this transformation and provided the corresponding amino acids in excellent yields and enantioselectivities. The purification process is extremely simple and concise and enables catalyst recovery. We conducted control experiments that are consistent with a mechanism that proceeds via Si-ACDC, while preliminary computational studies suggest steric effects to cause the observed enantioselectivity. As IDPi catalysts are currently being commercialized, the methodology reported here may facilitate the synthesis of pharmaceuticals, natural products, and peptidic foldamers.

Supporting Information Available

The Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/jacs.1c00249.

• Experimental details and analytical data for all new compounds, crystallographic data for compounds 4h, 4i, and 4j, HPLC traces, NMR spectra, computational studies, optimized structures, and Cartesian coordinates (PDF)

Accession Codes

CCDC 2056835–2056839 contain the supplementary crystallographic data for this paper. These data can be obtained free of charge via www.ccdc.cam.ac.uk/data_request/cif, or by emailing data_request@ccdc.cam.ac.uk, or by contacting The Cambridge Crystallographic Data Centre, 12 Union Road, Cambridge CB2 1EZ, UK; fax: +44 1223 336033.

The authors declare the following competing financial interest(s): We have a patent on the catalyst class.