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. 2021 Mar 18;16(3):e0248596. doi: 10.1371/journal.pone.0248596

Impact of routine Newcastle disease vaccination on chicken flock size in smallholder farms in western Kenya

Elkanah Otiang 1,2,3, Samuel M Thumbi 1,3,4, Zoë A Campbell 5, Lucy W Njagi 1, Philip N Nyaga 1, Guy H Palmer 3,4,6,*
Editor: Eric Fèvre7
PMCID: PMC7971550  PMID: 33735266

Abstract

Background

Poultry represent a widely held economic, nutritional, and sociocultural asset in rural communities worldwide. In a recent longitudinal study in western Kenya, the reported mean number of chickens per household was 10, with increases in flock size constrained principally by mortality. Newcastle disease virus is a major cause of chicken mortality globally and hypothesized to be responsible for a large part of mortality in smallholder flocks. Our goal was to determine the impact of routine Newcastle disease virus (NDV) vaccination on flock size and use this data to guide programs to improve small flock productivity.

Methods

We conducted a factorial randomized controlled trial in 537 households: in 254 households all chickens were vaccinated every 3 months with I-2 NDV vaccine while chickens in 283 households served as unvaccinated controls. In both arms of the trial, all chickens were treated with endo- and ecto parasiticides every 3 months. Data on household chicken numbers and reported gains and losses were collected monthly for 18 months.

Results

Consistent with prior studies, the overall flock size was small but with increases in both arms of the study over time. The mean number of chickens owned at monthly census was 13.06±0.29 in the vaccinated households versus 12.06±0.20 in the control households (p = 0.0026) with significant gains in number of chicks (p = 0.06), growers (p = 0.09), and adults (p = 0.03) in the vaccinated flocks versus the controls. Household reported gains were 4.50±0.12 total chickens per month when vaccinated versus 4.15±0.11 in the non-vaccinated controls (p = 0.03). Gains were balanced by voluntary decreases, reflecting household decision-making for sales or household consumption, which were marginally higher, but not statistically significant, in vaccinated households and by involuntary losses, including mortality and loss due to predation, which were marginally higher in control households.

Conclusion

Quarterly NDV vaccination and parasiticidal treatment resulted in an increase in flock size by a mean of one bird per household as compared to households where the flock received only parasiticidal treatment. While results suggest that the preventable fraction of mortality attributable to Newcastle disease is comparatively small relatively to all-cause mortality in smallholder households, there was a significant benefit to vaccination in terms of flock size. Comparison with previous flock sizes in the study households indicate a more significant benefit from the combined vaccination and parasiticidal treatment, supporting a comprehensive approach to improving flock health and improving household benefits of production in the smallholder setting.

Introduction

Poverty and undernutrition, including both wasting and stunting, are major global challenges as illuminated in their importance to achieving the United Nations’ Sustainable Development Goals [1]. Rural households in Africa, Asia, and Latin America disproportionately suffer from poverty and malnutrition [2, 3]. The Food and Agriculture Organization estimates that there are 500 million smallholder farms worldwide, which provide all or part of the household welfare for many of the 9% of the global population that living on less than US$2 per day [46]. Smallholder farms typically generate food and income from mixed crop agriculture, variably combined with small scale livestock production [7]. Chickens are the most commonly held livestock resource of smallholder households and represent an opportunity to provide eggs and meat to the household and potentially generate income from local sale [8, 9]. Furthermore, household chicken flocks represent an important economic and nutritional asset most commonly managed by women in rural households and can reflect their priorities for familial well-being [7, 8, 10].

Despite the global representation of chickens as the primary smallholder animal asset, small flock sizes and overall low productivity limit maximizing potential benefits [8, 11, 12]. Importantly, the low flock sizes do not appear to represent an economic based decision to optimize labour input while maximizing gain from household consumption or sale but rather a high level of involuntary losses due to mortality and predation [13]. A recent 4-year longitudinal study of 1,908 households in western Kenya found that the mean flock size was approximately 10 and highly stable over time, reflecting a balance of new chicks hatched on premises and losses, 60% of which were due to mortality [13]. Inputs into smallholder flocks were minimal: 98% of households reported that chickens scavenge for all or most of their feed during the day and 93% house chickens within the family dwelling at night [13]. Vaccination, supplemental nutrition, and treatment of endo- and ecto-parasites that would be expected to reduce morbidity and mortality [14] were uncommon [13].

Newcastle disease virus (NDV) is a highly transmissible and globally distributed infection of poultry [15, 16]. While high levels of biosecurity combined with vaccination are commonly used to prevent NDV outbreaks in commercial poultry, the reliance on free range scavenging for chickens in smallholder households results in ease of transmission between and within flocks [17]. Consequently, NDV is widely considered to be the leading constraint to efficient smallholder poultry productivity in Africa [8]. While vaccination is highly effective under controlled conditions, its efficacy under smallholder conditions may be much more variable depending on the underlying health and age composition of the flock [9, 12, 16, 17].

To determine whether regularly scheduled NDV vaccination resulted in increases in flock sizes over time, we conducted a factorial randomized controlled trial in 537 households where all chickens in 254 households were vaccinated every 3 months with I-2 NDV vaccine while chickens in 283 households served as unvaccinated controls. Here we report the change in monthly flock census over an 18 months period and discuss the results in the context of improving flock productivity and household well-being.

Materials and methods

Ethical approval

The study was approved by the Ethical and Animal Care and Use Committees (SSC Protocol no. 3159) of the Kenya Medical Research Institute.

Study population

The study took take place in Rarieda Sub-county of Siaya County in western Kenya within a health and demographic surveillance system (HDSS) site run by the Kenya Medical Research Institute and the United States Centres for Disease Control and Prevention (CDC) [18]. Livestock ownership is common in the area’s households at 93%; 95% of households with an average flock size of ten chickens with chicken mortality accounting for over half of all reported animal death cases in participating households [13, 19].

Study design

The field study was an 18-month factorial randomized controlled trial with 537 households enrolled and followed upon meeting an inclusion criteria of chicken ownership and grouped into two arms (vaccinated n = 254 and control n = 283). The sample size calculation used the assumption that Newcastle disease vaccination would decrease flock mortality by ≥10%, assuming a probability of type 1 error set at 0.05 and 80% detection power and further assuming 10% participant loss (household loss from study). This was based on average flock size per household of 10 chickens (range 4–60), accounting for unequal cluster sizes. The vaccinated group routinely received immunization of two drops of Newcastle disease virus (NDV) AVIVAX I-2 thermostable vaccine (109.7 egg infectious doses/ml) intranasally or intraocularly depending on chicken’s age at recruitment and every three months thereafter. All vaccines were diluted by an animal health technician on the morning of the vaccination, maintained in a cool box at 4°C, and delivered prior to noon. Chickens in the control arm were not vaccinated. The same animal health technician dusted ecto-parasiticides of the group carbaryl (Sevin® powder) on the chickens and administered oral deworming using piperazine citrate (Ascarex-D®) in drinking water at recruitment and then every three months for chickens in both arms of the study.

Data collection and analysis

Flock size and age composition of the flock was enumerated at each monthly visit by an animal health assistant blinded to the treatment groups. In addition, the individual responsible for flock or the household head was interviewed in the local language using a semi-structured questionnaire to collect recall data on increases and decreases to the flock during the prior three months. The data were collected using a mobile phone based application CommCare® and data maintained through a Microsoft Access database®. The data were cleaned and analysed using STATA (Stata, 2013). The full data set and data dictionary are provided in Open Science Framework https://osf.io/yn7fk/

Results

Study population

A total of 537 rural households in Rarieda Sub-county of Siaya County in western Kenya were enrolled and followed longitudinally over 18 monthly visits starting in December, 2016. By random household distribution, 254 were grouped into the vaccination arm while 283 served as controls. The primary respondents to the questionnaire were most often the individuals who managed the chickens (89%) or the head of the compound (11%). Of the individuals responsible for management of the flock, 93% were women.

Longitudinal monthly flock census

The mean flock sizes on visit 1, at the time of the first vaccination but prior to any possible effects of vaccination, were 11.63±0.70 for the 254 households in the vaccination arm of the study and 11.13±0.67 for the 283 control households. Enrolled households maintained flocks throughout the study period with less than 2% of visits recording no chickens at the monthly census. Over 18 monthly visits, the flock sizes increased in both arms but the total flock sizes were significantly greater in the vaccinated households: there was a cumulative mean of 13.06±0.29 chickens in the vaccinated households versus 12.06±0.20 in the control households (p = 0.0026) (Fig 1). The increases occurred across all age categories (Fig 1): the mean number of chicks in vaccinated households was 6.59±0.20 as compared to 6.20±0.13 in controls (p = 0.06), mean number of growers was 3.84±0.08 versus to 3.63±0.09 (p = 0.09), and mean number of adults was 3.32±0.19 as compared to 2.93±0.05 versus (p = 0.03). The increase was sustained throughout the study, whether analysed by the best-fit over the 18 visits (Fig 2) or by a best-fit tethered to the flock size at the visit 1 and then a best-fit determined (Fig 3).

Fig 1. Mean flock size at monthly census over 18 months.

Fig 1

Fig 2. Flock size dynamic over time (best-fit of all data points).

Fig 2

Fig 3. Flock size dynamic over time (best-fit of data points tethered to initial flock size).

Fig 3

Household reported gains and losses

During each monthly visit, the household respondent was asked to self-report gains and losses during the prior month. Households that received vaccination reported gains of 4.50±0.12 chickens per month as compared to 4.15±0.11 in the non-vaccinated control households (p = 0.03). Vaccination households reported total decreases of 2.50±0.09 chickens per month versus 2.43±0.09 in the control households (p = 0.56). Reported voluntary decreases in flock size, reflecting household decision-making for sales or household consumption, were marginally greater in vaccinated households, 1.10±0.05, as compared to 1.03±0.04 in control households (p = 0.19), representing 44% and 42% of the monthly decreases in vaccinated and control households, respectively (Fig 4). Involuntary losses, including mortality and both unspecified loss and loss to predation, were reported to be marginally higher in control households, 1.4±0.08, as compared to 1.3±0.08 in vaccinated households (p = 0.39), with mortality representing the greatest reported source of loss in both groups (Fig 4).

Fig 4. Source of reported monthly off-take in chickens.

Fig 4

Discussion

Newcastle disease is endemic at the village level in Kenya and specifically in this region of western Kenya [20], where greater than 50% of chicken mortality is attributed to NDV. The use of a relatively large factorial randomized controlled trial allowed determination of the impact of NDV vaccination on flock size. Quarterly NDV vaccination of all chickens resulted in a mean gain of one chicken per household. While this gain seems modest, it represents an 8–10% increase in flock size from vaccination against a single viral pathogen. Importantly, the increase was sustained throughout the 18-month study, which included both wet and dry seasons to account for seasonal variation in transmission [20]. This suggests the opportunity for increased gains over time and an accumulating impact of routine NDV vaccination. If these gains were utilized for either household nutrition or income from sale there would be measurable benefits to the family [21, 22]. Consumption of either eggs or chicken meat have been shown to reduce childhood stunting [22], which remains at a high level in the study region and throughout much of rural sub-Saharan Africa. Two prior studies in this population support the impact of larger flock size on nutritional gains. The first, a study of 1500 households, found that an increase in number of chickens per household associated with a 28% likelihood of childhood consumption of eggs in the prior 3 days, holding other household factors constant [19]. The second study of 1800 households showed that poultry ownership was linked to a significant increase in both egg and chicken consumption (adjusted incidence rate ratio of 1.3). Furthermore, consumption was associated with a significant increase in monthly child height gain for children over the age of 6 months [22]. Similarly, routine vaccination has potential to increase household income. In a recent study of smallholder households in rural Tanzania, the market price for vaccine to inoculate 10 chickens was US$1.20 while the local market price for an adult chicken was US$3.12 [23]. Notably, respondents in that study were willing to pay twice the market price for vaccine, reflecting that households valued vaccination and perceived a favorable return on investment [23]. As 93% of the individuals in this study that managed the flocks were women and women have been shown to devote a much greater proportion of income into family nutrition and health care, this relatively modest increase in income can have a significant impact on familial well-being [7, 10, 11].

The current study allowed an estimation of the preventable fraction of mortality due to NDV. Vaccination was carried out by qualified animal health technicians supervised by a licensed veterinarian and records were kept on the storage and delivery of the I-2 vaccines. While NDV I-2 vaccination has been shown in numerous experimental and field studies to be highly effective [2426], the preventable fraction of mortality due to a single vaccine reflects the overall causes of mortality and varies depending on the specifics of poultry management at the household level [17, 23]. The most reliable measure of vaccine impact from this study would be the 8–10% increase in total flock size at monthly census. In contrast to commercial poultry vaccination programs, in this study chickens were not uniformly vaccinated at a given age but on a quarterly schedule when all chickens on the premises were vaccinated regardless of prior vaccination history. This variation in vaccination history and immune status of individual birds affects the level of population immunity and would be likely to significantly diminish the flock level efficacy of vaccination. However, this variation in age structure for vaccination is reflective of smallholder household flock management.

The self-reported mortality by the household respondents indicated no significant difference in mortality between the vaccinated and control flocks (Fig 4). This discrepancy between independent census data and self-reported data has been previously observed among households in the study region [13]. In the prior study, individuals consistently overestimated gains and underestimated losses relative to actual census data [13]. This pattern is observed in the current study: as an example, the self-reported total monthly gains in vaccinated households were reported as 4.5 with overall monthly decreases of 2.5, inconsistent with census data that indicates a smaller monthly increase. Recall bias, representing systemic errors in remembering past events, and social desirability bias are two possible explanations for the discrepancy [27]. Households in the study region do not maintain written records on flock size, gains, and losses, thus losses that occurred earlier in the month may be discounted relative to gains that are still represented in the flock. This may be especially true for young chicks, which have a high mortality rate from NDV as well as other infectious and non-infectious causes [13, 15, 28, 29]. Social desirability bias, the tendency for survey respondents to answer questions in a way that will be viewed favourably by others, may also have an impact as the household may want to be seen by the interviewers and animal health team as being a responsible member of the community and thus overstate gains and understate involuntary losses, including mortality [30].

Notably, there were sustained gains in flock size in households that received vaccination and parasiticidal treatment and the control households that received only parasite control. While a control group with no treatment was not included (as participation required time commitment by the respondents), comparison with both the flock sizes at enrolment and the historical mean flock size of 10 in this study site [13, 19] suggest that parasiticidal treatment had a significant effect alone, which was further enhanced by NDV vaccination. Furthermore, quarterly visitation by an animal health technician provided the opportunity to seek ad hoc advice on flock management. This opportunity and the impact of external interest in a household’s flock size may also have improved management independent of or interacting with vaccination and parasiticidal treatment. This is consistent with prior studies showing the impact of combined interventions and emphasizes that a comprehensive approach to improved poultry management at the smallholder level is needed [8]. Integrating supplemental nutrition would highly likely increase the efficacy of vaccination as well as maximize benefits from parasite control. The lack of routine vaccination for smallholder flocks does not appear to reflect a lack of knowledge regarding the importance of vaccination as indicated by willingness to pay studies in which respondents were willing to pay more than the actual cost of NDV vaccine [23]. Rather, the primary barrier to improved management appears to be at the level of services delivery. At a household level the incentives for effective delivery of more comprehensive poultry health and husbandry services are too small for commercial investment. However, at a community level this may provide a larger integrated market that would attract commercial engagement, especially if incentivized by government support for rural communities.

Finally, whether increased flock sizes are desirable from a labor management perspective is important, especially given that women, who most commonly have primary responsibility for flock husbandry management in this region, have multiple other demands on their effort. In a prior study [13], we assessed whether poultry owning households in this region maintained relatively small flock sizes as a deliberate decision to maximize benefits per unit labor by voluntary reduction of chicken numbers by consumption or sale versus involuntary losses due to mortality, predation or theft. The overwhelming majority of off-take was involuntary, principally due to mortality, that does not reflect the owner’s decision to maximize value through nutritional gain, income, or social capital. This strongly suggests that there is substantial opportunity to enhance the value of chickens as an asset, both nutritional and income generating, for smallholder households.

Conclusion

This study demonstrates a significant impact of NDV vaccination on overall flock size that is maintained over time and is enhanced by parasite control. This is consistent with the need for integrated control of infectious diseases of poultry with substantial opportunity to improve nutritional and economic security for rural smallholder households.

Acknowledgments

We thank the contributions of the following individuals, who made the research possible. Field team supervisor, James Oigo; Animal Health Technicians, Samwel Asembo, Geoffrey Odima, Bob Miseda, Beryl Oyoo and Austin Ochung’; Community Health Interviewers: Joseph Onyango, Daniel Odongo, Rosemary Warinda, Bridon Kojo, Thomas Wachiaya, Fredrick Ong’wen, Meresia Owuor; Martin Aundi, Fredrick Adhiambo, Benedine Warinda, Jane Okal, Fred Ojode; Data Programmer and Manager, Linus Otieno; Data Clerk, Judith Oduol.

Data Availability

Data can be found at https://osf.io/yn7fk/ (DOI: 10.17605/OSF.IO/YN7FK).

Funding Statement

The study was supported by a gift of Paul G. Allen to Washington State University. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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Decision Letter 0

Eric Fèvre

17 Feb 2021

PONE-D-21-01892

Marginal impact of routine Newcastle Disease vaccination on chicken flock size in smallholder farms in western Kenya

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Reviewer #1: PONE-D-21-01892 Marginal impact of routine Newcastle Disease vaccination on chicken flock size in smallholder farms in western Kenya by Otiang, Thumbi, Campbell, Njagi, Nyaga, and Palmer describe the study they performed to ascertain the impact of Newcastle disease virus vaccination on the flock size in smallholder flocks in western Kenya. Original data are presented and don’t appear to have been previously published.

There is no need to capitalize the “d” in the word disease in the title and throughout the manuscript: Newcastle disease virus or Newcastle disease.

As you stated in the discussion, “this study demonstrates a significant impact of NDV vaccination on overall flock size that is maintained over time and is enhanced by parasite control.” Thus, I disagree with the word marginal in the title. The two sentences seem to be opposite. Perhaps you can remove the word marginal: Impact of routine Newcastle disease vaccination on chicken flock size in smallholder farms in western Kenya. That way you get to explain in the paper how the marginal difference in bird numbers in the two groups actually translates to an actual impact in nutrition and finances of the family.

In the materials and methods section is not clear who did the vaccination every three months and how this relates to the survey collecting data every three months. Was the person who provided the survey also providing the vaccine (to ensure it was kept at 4C)? If not, where did the person obtain the vaccine and how long after receiving it did they have to catch and vaccinate 13+ chickens? I now see some of this info. in the discussion (line 201)—perhaps include some of it in the materials and methods. Also include who dilutes the vaccine, when the vaccine is diluted in relation to when it administered and the intended target vaccine titer given to each bird. This is for the purposes of allowing others who would like to replicate your study the parameters that you used.

What was the average number of vaccines that each chicken received? Chickens would have to have at least two vaccines to be considered protected depending if any maternal antibodies were present to neutralize the live vaccine administered. If there is a constant turnover vaccination might be less effective.

Did all of the smallholders keep chickens each month or were there months they did not have any chickens?

Line 132 data is plural. The data were collected…

There is no description of any birds getting sick and/or dying of respiratory disease in a country where virulent Newcastle disease virus is endemic. There are no questions about possible AIV or NDV respiratory deaths.

Many have published that NDV occurs with seasonality for some countries in Africa. Of the 26 dates with the highest amounts of total mortality 12.7% occur in Dec, Jan and Feb and almost 7% in April and May. Does this correspond to a dry or wet season?

Also, birds with partial protection often have neurological signs, potentially without mortality. What is the usual outcome when an owner observes neurological or respiratory symptoms? Are the birds consumed?

Reviewer #2: This is a well structured, well presented article describing a longitudinal study of the impact of ND vaccine on flock size in smallholder households in Western Kenya.

The authors do well to lay out the context of smallholder poultry in livelihoods in low and middle income countries, before getting into the meat of the study.

It is extremely difficult to measure flock/herd size changes, and the study is well structured in terms of sample sizes, time of study, and different methodologies built in to measure such changes.

A few queries:

Are there any other factors which might account for these changes, other than ND vaccine? The presence of veterinary assistants who apply the vaccine may also be consulted for advice of other issues while vaccinating, can the mere attendance of a veterinary assistant administering technical interventions be ruled out as having any contributory effect? Could any other factors account for the differences seen?

What flock size is manageable by the different smallholders in this region? Is the increase in flock size always a good thing? With more poultry running around, is there a greater likelihood of predators or thefts, which would discourage flock size beyond a manageable limit?

In the conclusions there are some huge assumptions that flock size changes will result in better household nutrition and income, which are not supported by data specific to this population. And there is also an assumption of what women would do with the flock size changes, which might well be true, but are not supported by data from this study.

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PLoS One. 2021 Mar 18;16(3):e0248596. doi: 10.1371/journal.pone.0248596.r002

Author response to Decision Letter 0


27 Feb 2021

We appreciate the reviewers’ time and effort in the critique of the manuscript and have responded to the comments below and note the specific changes in the revised manuscript.

Reviewer 1: The reviewer had nine specific suggestions, each of which is addressed below and with changes to the manuscript.

1.1 “There is no need to capitalize the “d” in the word disease in the title and throughout the manuscript”. We have made this change throughout the manuscript.

1.2 “As you stated in the discussion, ‘this study demonstrates a significant impact of NDV vaccination on overall flock size that is maintained over time and is enhanced by parasite control.’ Thus, I disagree with the word marginal in the title”. We have revised the title accordingly.

1.3 “In the materials and methods section is not clear who did the vaccination every three months and how this relates to the survey collecting data every three months. Was the person who provided the survey also providing the vaccine (to ensure it was kept at 4C)? If not, where did the person obtain the vaccine and how long after receiving it did they have to catch and vaccinate 13+ chickens? I now see some of this info. in the discussion (line 201)—perhaps include some of it in the materials and methods. Also include who dilutes the vaccine, when the vaccine is diluted in relation to when it administered and the intended target vaccine titer given to each bird. This is for the purposes of allowing others who would like to replicate your study the parameters that you used.” Households were contacted the day before the vaccination/data collection and requested to keep their chickens housed the following day (often this is within the home). The vaccinator, a licensed animal health technician, diluted vaccines in the morning and maintained them in a 4oC cold box until delivered to the birds. The vaccine vial contains 109.7 EID50/ml with a delivered target of 108.7 EID50 per bird. All vaccinations were delivered before noon each day. The same individual was also responsible for parasiticidal treatment for both groups. Data was collected monthly by enumerators who were blinded to the treatment groups. This has been added to the Materials and methods.

1.4 “What was the average number of vaccines that each chicken received? Chickens would have to have at least two vaccines to be considered protected depending if any maternal antibodies were present to neutralize the live vaccine administered. If there is a constant turnover vaccination might be less effective.” All birds on the premises were vaccinated at each 3 month interval, regardless of prior vaccination status. This does introduce some variation in terms of immunity in individual birds and thus at the population basis. While this is reflective of household chicken populations and recommended vaccination practices, it may affect vaccine efficacy. We have added this to the Discussion.

1.5 “Did all of the smallholders keep chickens each month or were there months they did not have any chickens?” All households had chickens at enrollment. During the study, 111 households reported no birds at a monthly census (<2% of observations). This had been added to the Results.

1.6 “Line 132 data is plural. The data were collected…” This has been corrected.

1.7 “There is no description of any birds getting sick and/or dying of respiratory disease in a country where virulent Newcastle disease virus is endemic. There are no questions about possible AIV or NDV respiratory deaths.” In our prior study of 1,908 poultry owning households (which overlap with those of the present study) 66% of deaths occurred in birds showing nervous signs and 58% with respiratory signs, both consistent with diagnosis of Newcastle disease. Based on presumptive diagnoses by animal health technicians, Newcastle disease was responsible for 52% of mortality followed by Fowl Pox and Infectious Bursal Disease. Although not confirmed by laboratory diagnosis, this is consistent with a high incidence of Newcastle disease in these households (Otiang E et al., Mortality as the primary constraint to enhancing nutritional and financial gains from poultry: A multi-year longitudinal study of smallholder farmers in western Kenya. PLoS One 15(5):e0233691, 2020). We have revised the Discussion to reference the incidence of Newcastle disease in this region.

1.8 “Many have published that NDV occurs with seasonality for some countries in Africa. Of the 26 dates with the highest amounts of total mortality 12.7% occur in Dec, Jan and Feb and almost 7% in April and May. Does this correspond to a dry or wet season?” The December-February period bridges the transition from the “short rains” wet season in December to the dry months of January and February. April and May are definitely in the “long rains” wet season. We have added this to the Discussion along with a relevant review that summarizes seasonal data in Kenya (Apopo AA et al., A retrospective study of Newcastle disease in Kenya. Tropical Animal Health and Production 52:699-710, 2020).

1.9 “Also, birds with partial protection often have neurological signs, potentially without mortality. What is the usual outcome when an owner observes neurological or respiratory symptoms? Are the birds consumed?” Households report that sick birds are normally buried or burned with only 10% reporting subsequent consumption.

Reviewer 2: The reviewer had three specific suggestions, each of which is addressed below and with changes to the manuscript.

2.1 “Are there any other factors which might account for these changes, other than ND vaccine? The presence of veterinary assistants who apply the vaccine may also be consulted for advice of other issues while vaccinating, can the mere attendance of a veterinary assistant administering technical interventions be ruled out as having any contributory effect? Could any other factors account for the differences seen?” The reviewer’s point is supported by the sustained increases in poultry numbers in households where chickens were either vaccinated or unvaccinated households. In addition to the provision of endo- and ecto-parasiticidal treatments to both groups, the presence of the veterinary assistants in both groups may contribute to the increase, due either to specific advice on husbandry or the response of the caretaker to external interest in flock size. We have added this to the revised Discussion.

2.2 “What flock size is manageable by the different smallholders in this region? Is the increase in flock size always a good thing? With more poultry running around, is there a greater likelihood of predators or thefts, which would discourage flock size beyond a manageable limit?” This is a highly relevant question. In a prior study, we assessed whether poultry owning households in this region maintained these relatively small flock sizes as a deliberate decision to maximize benefits per unit labor by voluntary reduction of chicken numbers by consumption or sale versus involuntary losses due to mortality, predation or theft (Otiang E et al., Mortality as the primary constraint to enhancing nutritional and financial gains from poultry: A multi-year longitudinal study of smallholder farmers in western Kenya. PLoS One 15(5):e0233691, 2020). The overwhelming majority of off-take can be classified as involuntary off-take, principally due to mortality, that does not reflect the owner’s decision to maximize value through nutritional gain, income, or social capital. This strongly suggests that there is substantial opportunity to enhance the value of chickens as an asset, both nutritional and income generating, for smallholder households living at poverty level. We have emphasized this in the revised manuscript.

2.3 “In the conclusions there are some huge assumptions that flock size changes will result in better household nutrition and income, which are not supported by data specific to this population. And there is also an assumption of what women would do with the flock size changes, which might well be true, but are not supported by data from this study.” We appreciate this point. Two prior studies in this population support the impact of larger flock size on nutritional gains. The first, a study of 1500 households, found that an increase in number of chickens per household associated with a 28% likelihood of childhood consumption of eggs in the prior 3 days, holding other household factors constant (p<0.001) (Thumbi SM et al., Linking human health and livestock health: a "one-health" platform for integrated analysis of human health, livestock health, and economic welfare in livestock dependent communities. PLoS One 10:e0120761, 2015). The second study of 1800 households showed that poultry ownership was linked to a significant increase in both egg and chicken consumption (adjusted incidence rate ratio of 1.3). Furthermore, consumption was associated with a significant increase in monthly child height gain for children over the age of 6 months (Mosites EM et al., Child height gain is associated with consumption of animal-source foods in livestock-owning households in western Kenya. Public Health Nutrition 12:1-10, 2017). We have emphasized these finding, accompanied by the relevant references.

Attachment

Submitted filename: Response to Reviewers.docx

Decision Letter 1

Eric Fèvre

2 Mar 2021

Impact of routine Newcastle disease vaccination on chicken flock size in smallholder farms in western Kenya

PONE-D-21-01892R1

Dear Dr. Palmer,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.  Please see the additional editorial note below.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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Additional Editor Comments (optional):

Thank you for the revisions and the care taken with your response. The manuscript is now acceptable for publication. Reading through the comments and the responses, I wonder whether, when discussing flock sizes and the change in farming systems in the region under study, it might be relevant to cite the following paper also: https://doi.org/10.1017/S175173112000110X, which discusses the trajectory of poultry intensification in this region.

Reviewers' comments:

Acceptance letter

Eric Fèvre

9 Mar 2021

PONE-D-21-01892R1

Impact of routine Newcastle disease vaccination on chicken flock size in smallholder farms in western Kenya

Dear Dr. Palmer:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

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