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PLOS One logoLink to PLOS One
. 2021 Mar 19;16(3):e0236772. doi: 10.1371/journal.pone.0236772

Establishment of reference intervals of clinical chemistry analytes for the adult population in Egypt

Heba Baz 1, Kiyoshi Ichihara 2,*, May Selim 1, Ahmed Awad 3, Sarah Aglan 3, Dalia Ramadan 1, Amina Hassab 4, Lamia Mansour 1, Ola Elgaddar 3
Editor: Colin Johnson5
PMCID: PMC7979267  PMID: 33740794

Abstract

Background

This is the first Egyptian nationwide study for derivation of reference intervals (RIs) for 34 major chemistry analytes. It was conducted as a part of the global initiative by the IFCC Committee on Reference Intervals and Decision Limits (C-RIDL) for establishing country-specific RIs based on a harmonized protocol.

Methods

691 apparently healthy volunteers aged ≥18 years were recruited from multiple regions in Egypt. Serum specimens were analyzed in two centers. The harmonization and standardization of test results were achieved by measuring value-assigned serum panel provided by C-RIDL. The RIs were calculated by parametric method. Sources of variation of reference values (RVs) were evaluated by multiple regression analysis. The need for partitioning by sex, age, and region was judged primarily by standard deviation ratio (SDR).

Results

Gender-specific RIs were required for six analytes including total bilirubin (TBil), aspartate and alanine aminotransferase (AST, ALT). Seven analytes required age-partitioning including glucose and low-density lipoprotein cholesterol (LDL-C). Regional differences were observed between northern and southern Egypt for direct bilirubin, glucose, and high-density-lipoprotein cholesterol (HDL-C) with all their RVs lower in southern Egypt. Compared with other collaborating countries, the features of Egyptian RVs were lower HDL-C and TBil and higher TG and C-reactive protein. In addition, BMI showed weak association with most of nutritional markers. These features were shared with two other Middle Eastern countries: Saudi Arabia and Turkey.

Conclusion

The standardized RIs established by this study can be used as common Egyptian RI, except for a few analytes that showed regional differences. Despite high prevalence of obesity among Egyptians, their RVs of nutritional markers are less sensitive to increased BMI, compared to other collaborating countries.

Introduction

Egypt, being at the crossroads of Africa and Asia overlooking the Mediterranean Sea, had created a demographic melting pot of ethnicities over a long period of history. Thus, the study of the reference intervals (RIs) of common chemistry analytes and their sources of variations (SVs) in Egyptians in comparison to other nations is intriguing.

This study comes as the first Egyptian initiative to report RIs for 34 major laboratory analytes: 27 chemistry analytes, 6 immunoturbidimetric analytes, and parathyroid hormone. In 2013, the Committee on Reference Intervals and Decision Limits (C-RIDL), International Federation of Clinical Chemistry (IFCC) issued a harmonized protocol for establishing regional RIs by means of multicenter study [1]. For standardization and harmonization of tests results, it provided a value-assigned serum panel to collaborating countries on request [2]. Besides determining the RIs for common analytes, this study aimed at investigating the sources of variation that may impact the RIs, including age, gender, body mass index (BMI) and region.

Egypt is the third Middle Eastern country following Saudi Arabia and Turkey that adopted the C-RIDL protocol to derive country-specific RIs for nationwide use. The results of this study provide an opportunity to compare the RIs among Middle Eastern countries, and across other collaborating countries of widely different demographic profiles such as body mass index (BMI), alcohol intake and smoking.

Materials and methods

1. Study design

This study was conducted by a collaboration of Cairo University Faculty of Medicine and Medical Research Institute of Alexandria University. The study was approved by the ethical committee of Cairo University (N-13-2015) on January 31st, 2015, and the final data analysis ended early 2020. Each participant signed an informed consent form before enrollment.

2. Recruitment of reference individuals

A total of 691 apparently healthy Egyptian volunteers were recruited from Cairo region [Cairo, Giza, Helwan], Alexandria, the Nile Delta [Beheyra, Daqahlia, Damietta, Gharbia, Kar Elshiekh, Menoufia], South (Upper) Egypt [Fayoum, Beni-Sueif, Minya, Assiut, Qena, and Nubia], and the Suez Canal [Port Said and Suez]. The subjects aged more than 18 years and were stratified into 5 age groups: 18–29, 30–39, 40–49, 50–65 and ≥65 years. Subjects were selected so that at least 80% were from the age of 18 to 65 years, with equal gender mix and age distributions, except for individuals over 65 years of age. We followed the inclusion and exclusion criteria of C-RIDL protocol: Participants of the study were included if they are feeling subjectively well, older than 18 years with no upper limit of age for participation. Those who take less equal 3 drugs for minor conditions or nutritional supplements were allowed. All the following were excluded: participants who were known diabetics on insulin or oral therapy, who had a positive history of hepatic or renal diseases, who had an grossly abnormal test results in the previous year, who were hospitalized within the previous 4 weeks prior to participating in the study, who donated blood in the previous 3 months, known carrier for HCV, HBV or HIV, who participated recently in a clinical trial for an investigational product.

3. Blood sampling

The volunteers were instructed to avoid excessive exercise and eating a few days before the sampling. The time of sampling was set from 8–11 AM, after resting in a seated position for approximately 20 minutes [3]. In the resting period, each participant answered to the detailed health-status questionnaire that was adopted from the harmonized protocol. Ten mL of blood were drawn into a plain evacuated tube. Clotted samples were centrifuged, and the sera were divided and stored at –80°C.

4. Analytes and measurements

The following 27 chemistry analytes were analyzed spectrophotometrically using dedicated manufacturer reagents: total protein (TP), albumin (Alb), uric acid (UA), urea, creatinine (Cre), calcium (Ca), inorganic phosphate (IP), magnesium (Mg), iron (Fe), unsaturated iron binding capacity (UIBC), total bilirubin (TBil), direct bilirubin (DBil), glucose (Glu), total cholesterol (TC), triglycerides (TG), high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), aspartate transaminase (AST), alanine transaminase (ALT), lactate dehydrogenase (LDH), Alkaline Phosphatase (ALP), γ-glutamyl transferase (GGT), creatine kinase (CK), and amylase (AMY). Three analytes were assayed by Ion selective electrodes: sodium(Na), potassium(K), chloride (Cl). Six analytes were assayed by immunoturbidimetric methods namely: immunoglobulins G, A, and M (IgG, IgA, IgM), complement components 3 and 4 (C3, C4) and C-reactive protein (CRP), parathormone (PTH) was assayed by electro-chemiluminescent immunoassay. S1 Table shows details of assay methods and traceability of each measurement as well as formulae for calculating the following calculated parameters: globulin (Glb), estimated glomerular filtration rate (eGFR) [4], adjusted calcium (aCa), total iron binding capacity (TIBC), and non-HDL-C (nonHDL).

Measurements were performed in a batch of 60~150 specimens/per day, after thawing at room temperature for at least 1 hour. Chemistry samples collected by Cairo University were analyzed on Beckman AU 680 (Beckman Coulter International, Nyon, Switzerland), while chemistry samples collected by Alexandria University as well as all samples for immunoturbidimetry and PTH from the two centers were measured on Cobas 6000 modular system (Cobas modular Roche, Indianapolis IN, USA), Roche, at Hassab Labs in Alexandria. Both labs are ISO 15189 accredited. Samples were assayed within 2−3 months of storage at −80°C except for the following analytes: IgG, IgM, IgA, C3, C4, CRP and PTH, which were measured 8 months after the collection.

5. Between-center method comparison and standardization

A panel composed of 50 healthy volunteers' sera with assigned values for 34 chemistry and immunoturbidimetry analytes [2,5] was measured by the two centers for merging and standardization of test results as described elsewhere For between-day quality control, "mini-panel" was prepared comprising sera of 4 volunteers measure at each run of assay in both centers [2].

6 Statistical analyses

6.1. Sources of variation of reference values

Multiple regression analysis (MRA) was performed, separately for males and females, to examine sources of variation. Reference values (RVs) of each analyte were set as an objective variable, while set as explanatory variables were volunteers' region, age, body mass index (BMI), levels of cigarette smoking, exercise, consumption of soft drinks. For the region, we categorized the volunteers by their origin either as northern or southern (Upper) Egypt, where northern Egypt included inhabitants of Alexandria, Delta, Cairo, and Suez Canal, while southern Egypt included inhabitants from Fayoum, Beni-Sueif or areas southern as far as Nubia. Northern Egypt was set as the reference category: [northern] = 0, [southern] = 1. The degree of association of each explanatory variable with the objective variable was expressed as a standardized partial regression coefficient (rp), which generally takes a value between −1.0 and 1.0. We regarded |rp|≥0.2 as an appreciable effect size of the association between small correlation (0.1) and medium correlation (0.3), specified by Cohen [6].

6.2. Partitioning criteria

To judge the need for partitioning RVs by sex, age-subgroup (<45 versus ≥45 years), and region (northern or southern Egypt), we primarily used standard deviation ratio (SDR) based on analysis of variance (ANOVA). The partitioning of RVs by age was done arbitrarily at 45 years to ensure enough data size for the higher age group. SDR for a particular SV (SDRsv) was calculated as standard deviation (SD) due to a particular source of variation (SDsv) divided by SD due to “coarse” between-individual SD (SDbi) or SD comprising the RI(SDRI). We regarded SDRs ≥ 0.3 as an appreciable level of between-subgroup variations, and SDRs≥0.4 as requiring partitioning of RVs by the factor concerned [7].

Because SDR represents the magnitude of between-subgroup differences at the central part of RV distribution, it may not reflect between-subgroup differences at lower or upper limits (LL or UL) of the RI. Therefore, as a secondary index of between-subgroup difference, "bias ratio" (BR) was computed at LL and UL. For example, the equation shown below for calculating BR of between-sex difference at UL (BRUL),

BRUL=ULMULF(ULMFLLMF)/3.92

where subscript M, F, and MF represent male, female, and male + female, respectively, the same for the calculation of bias ratio for LL (BRLL).

According to the conventional specification of allowable bias at the minimum level: 0.375×SDG2+SDI2=(SDRI) [8] where SDG and SDI represent “pure” between- and within-individual variations, we regard BRUL (or BRLL) > 0.375 as a secondary criterion for partitioning RVs by sex, age, and region.

In both MRA and ANOVA, the RVs of analytes that showed highly skewed distributions were transformed logarithmically before the analyses to avoid excessive influence of deviated data in the periphery of RV distributions. Such analytes included TG, AST, ALT, LDH, GGT, CK, and CRP were performed using a statistical software, StatFlex Ver.7 (Artech, Osaka, Japan).

6.3. Derivation of reference intervals

The parametric method was used for computing reference intervals after transforming the distribution of RVs into Gaussian form using the modified Box-Cox transformation [7] to obtain mean and SD. The RI was calculated as the mean±1.96SD, which corresponds to the central 95% limits or LL and UL under transformed scale, then they were reverse-transformed to get the LL and UL on the original scale.

For improved precision of the RIs, the bootstrap method through 50-times resampling of the dataset was applied to obtain smoothed lower and upper limits (LL, UL), and mean of the reference intervals. This resampling procedure was also used for predicting 90% confidence intervals (CI) for the limits of the reference interval.

The LAVE method [7] was applied for the secondary exclusion of individuals with conditions affecting nutritional, muscular, and inflammatory markers. In our study, the LAVE method was applied in two groups using a different set of reference tests. Group 1 consisted of nutritional, muscular markers, enzymes: Alb, UA, Glu, TC, TG, HDL-C, LDL-C, nonHDL, AST, ALT, LDH, GGT, CK, AMY, CRP. Group 2 consisted of TP, Alb, Glb, Na, K, Cl, Ca, Fe, UIBC, TIBC, IgG, IgA, IgM, C3, C4, and CRP. The reference tests used for LAVE for each group were 11 analytes for Group 1 (Alb, UA, Glu, TG, nonHDL-C, AST, ALT, LDH, GGT, CK, CRP), and 10 analytes for Group 2: Alb, Glb, Na, Cl, Ca, Fe, UIBC, IgG, C3, CRP.

Results

1. Demographic profile of participants (S2 Table)

The 691 participants in our study included 323 males and 368 females. Seven individuals were excluded due to overt diseases: infection with high CRP, extreme hyperlipidemia, hepatitis C antibody positivity. Mean±SD of BMI for Egyptians was 28.9±5.5 kg/m2 in females and 27.5±4.4 kg/m2 in males. Females were found to have a slightly increasing BMI with advancing age while males remained almost the same. Regions of origin of participants were Southern Egypt (Upper Egypt) 38.5% (including Nubia accounting for 0.4%), and Northern Egypt 61.5% (Cairo 30%, Delta and Suez Canal 17.5%, Alexandria 14%). As for physical exercise, only 2% reported regular exercise from one to six days a week. Participants with smoking habit were 27.5% in males, and 1.1% in females and those who did not deny drinking alcohol were 1.25% in males and 0.6% in females.

From the health status questionnaire, we found regular use of drugs in the following frequencies: anti-hypertensives in 13 volunteers (1.9%), analgesics 51 (7.5%), anti-allergic 10 (1.6%), antacid 24 (3.5%), statin 4 (0.6%), others 8 (1.2%). We disregard the information in the subsequent analyses because they were all minor and small in dosage.

2. Merging the datasets from the two participating laboratories

For the analytes with assigned values in the serum panel, (i.e. the standardized analytes), the test results of the serum panel measured in common in the two centers were used to compare the two participating laboratories (S1 Fig shows the comparison between the panel results from the two laboratories). Among these analytes, obvious dissociation of panel results was observed between the two centers for Alb, Cre, Na, Cl, and Mg, and slight dissociations for HDL-C, AST, ALP, and GGT. This warranted recalibration of the results of each center independently to the assigned values for merging by use of major-axis linear regression lines. Then the results of the two centers were merged into one data set.

For the non-standardized analytes: TP, TBil, DBil, TIBC, UIBC; the test results from Alexandria University were aligned to those of Cairo University by use of the major axis regression lines constructed from the panel test results of the two centers.

3. Sources of variation and partitioning of reference values

Results of MRA are shown in Table 1 by setting a threshold of practical significance (effect size) as rp = 0.2. Age, BMI, and regionality (North vs. South Egypt) were the three major SVs. In males, with the advancement of age, urea, Cre, aCa, and TG increased, while eGFR and ALT decreased. Increasing BMI was associated with an increase in nutritional markers like UA, TC, LDL-C, nonHDL, C3, and C4, but the level of association was slight with their rp values between 0.20 and 0.26. It is of note that the associations of BMI with Glu, TG, AST, ALT, and CRP, major nutritional markers, were at rp<0.2. The regionality affected DBil with a rp value of −0.24, indicating lower DBil values among individuals from southern Egypt. Smoking habit showed a weak negative association with IgA: i.e., RVs of IgA were lower in those who smoked.

Table 1. Multiple regression analysis for source of variations of RVs.

Inline graphic

Multiple regression analysis was performed separately for each sex by setting RVs of each analyte as objective variable and fixed set of explanatory variables. Listed in the table are standardized partial regression coefficient (rp). |rp| ≥ 0.20 was considered significant and shown in bold letter. The magnitude of negative |rp| was expressed by red bar and positive by green bar.

In females, age was positively associated with non-HDL, TG, LDL-C, TC, ALP, Urea, Cre, and GGT in this order of strength and negatively associated with eGFR. The association of BMI with nutritional markers was weak with |rp|<0.20 except for CRP, TC, and Na. As regards the regionality, RVs of southern Egypt were found lower (rp≤−0.2) for DBil, HDL-C, and Glu.

Further analyses of the SVs were performed using nested ANOVAs (Table 2), where the values of SDR was marked in two grades: SDR ≥0.3 in bold and SDR ≥0.4 in orange background, respectively considered as between-subgroup differences of "non-negligible" and "significant" degree.

Table 2. Standard deviation ratios (SDR) representing the magnitude of between-sex, between-region, and between-age variations of RVs.

Test item SDRsex SDRage SDRreg
M F M F
TP 0.000 0.000 0.044 0.189 0.000
Alb 0.166 0.113 0.057 0.080 0.000
Glb 0.078 0.053 0.000 0.173 0.162
UA 0.635 0.184 0.265 0.109 0.044
Urea* 0.353 0.328 0.269 0.000 0.000
Cre 0.974 0.213 0.206 0.247 0.102
eGFR 0.000 1.025 1.147 0.296 0.000
Na 0.000 0.000 0.000 0.208 0.232
K 0.211 0.065 0.045 0.000 0.224
Cl 0.030 0.000 0.129 0.000 0.000
Ca 0.206 0.000 0.098 0.110 0.000
aCa 0.000 0.228 0.000 0.000 0.000
IP 0.000 0.000 0.198 0.166 0.244
Mg 0.189 0.000 0.096 0.000 0.099
Fe* 0.306 0.000 0.000 0.216 0.251
TIBC 0.266 0.205 0.000 0.000 0.133
UIBC 0.375 0.191 0.000 0.000 0.000
TBil* 0.471 0.000 0.000 0.185 0.241
DBil* 0.364 0.000 0.000 0.364 0.519
Glu* 0.000 0.109 0.000 0.090 0.428
TC 0.000 0.000 0.390 0.000 0.226
TG* 0.114 0.257 0.257 0.215 0.336
HDL-C 0.269 0.163 0.000 0.000 0.423
LDL-C 0.000 0.000 0.373 0.000 0.258
nonHDL 0.000 0.140 0.497 0.000 0.149
AST* 0.414 0.043 0.099 0.142 0.000
ALT* 0.292 0.373 0.000 0.223 0.138
LDH* 0.000 0.000 0.000 0.252 0.358
ALP* 0.231 0.228 0.386 0.000 0.000
GGT* 0.479 0.372 0.314 0.000 0.111
CK* 0.395 0.015 0.000 0.000 0.000
AMY* 0.244 0.241 0.000 0.081 0.000
IgG 0.159 0.000 0.000 0.110 0.215
IgA* 0.000 0.030 0.146 0.000 0.092
IgM* 0.199 0.173 0.058 0.120 0.106
C3 0.061 0.000 0.207 0.115 0.000
C4 0.000 0.119 0.000 0.107 0.181
CRP* 0.000 0.106 0.123 0.179 0.113
PTH* 0.000 0.131 0.016 0.000 0.071

Between-sex differences with significant SDRsex (shown in the parenthesis) were observed for Cre (0.97), UA (0.64), GGT (0.48), TBil (0.47), AST (0.41), CK (0.40) in the order of its magnitude. RVs of all the above analytes were higher in males than females. It is notable that SDRsex did not exceed the threshold of 0.4 in HDL-C (0.27), IgM (0.20), Alb (0.17), TG (0.11), and CRP (0.00), RIs of which are often partitioned by sex.

Significant between-age differences for nonHDL (0.50) among females was noted affirming the already noted significant rp values derived by MRA, as well as an expected significant SDRage for eGFR for both sexes. Graphical representation of sex and age-related changes for selected parameters are shown in Fig 1. S2 Fig shows all parameters.

Fig 1. Sex and age-related changes of selected parameters.

Fig 1

RVs were partitioned by sex (male: M, female: F) and age-subgroups (~29, 30~39, 40~49, 50~). The box in the center of each scattergram indicates the mid 50% range of RVs, and its central vertical bar represents the median. The data size is shown at the right bottom of the age group labels. Because no secondary exclusion was done for RVs, the range of the scatter plot may not match to the RI to be determined.

Regarding the between-region difference (SDRreg), it was observed only in females for DBil (0.52), Glu (0.43), and HDL-C (0.42), with all of their RVs lower in the South compared to the North as shown in S3 Fig.

4. Derivation of reference intervals

RIs were derived by the parametric method with or without the LAVE. The calculations were done in two steps, first partitioning of RVs by sex, followed by further partitioning by age at 45 years (<45 versus ≥45 years). The RIs by the former calculation are listed for all analytes in S3 Table and those by the latter calculation are listed in S4 Table only for those analytes showing non-negligible levels of SDRage or BRLL or BRUL.

From SDRsex>0.4, sex specific RIs were adopted for UA, Cre, TBil, AST, and GGT. On the other hand, although SDRsex was below 0.4, RIs were partitioned by sex due to high BRLL or BRUL (>0.375) for the following analytes: urea, eGFR, TIBC, UIBC, DBil, HDL-C, nonHDL, ALT, ALP, CK, AMY, IgG, and CRP. The exception to this decision scheme was applied to Alb, K, IP, Mg, Fe, and IgM because actual between-sex differences at LL or UL were small or 2~4 times of the reporting unit of each analyte.

Based on SDRage, RIs partitioned by age were found necessary only for eGFR (males and females) and nonHDL (female). While, based on significant BRLL or BRUL for between-age subgroup differences, age-partitioned RIs were also adopted in females for UA, TG, ALT, GGT, and CK, and in both sexes (without gender distinction) for Glu, TC, and LDL-C.

As for the need for applying the LAVE method, the decision was made based on BRLL or BRUL for the difference of RIs with/without LAVE. It turned out that the LAVE method was found effective in lowering the UL of the RIs in male for UA, TIBC, nonHDL, AST, TC, GGT, IgG, and CRP, and in female for TC, TG, AST, ALT, GGT, and CK. The rationale behind choosing each RI are shown in S3 and S4 Tables. The list of RIs thus chosen are shown in Table 3.

Table 3. The list of RIs stratified by sex and age group.

90%CI of LL RI in SI unit 90%CI of UL RI in conv. unit
Item Unit LAVE Sex Age n L H LL 1 UL L H Unit LL Me UL
TP g/L (-) MF 18~65 620 58.5 60.8 60 71 82 80.9 82.8 g/L 6.0 7.1 8.2
Alb g/L (-) MF 18~65 620 34.9 36.3 36 44 51 50.3 51.8 g/L 3.6 4.4 5.1
Glb g/L (-) MF 18~65 619 18.9 20.1 20 27 37 35.9 38.0 g/L 2.0 2.7 3.7
UA μmol/L (-) M 18~65 289 149 188 168 326 479 463 495 mg/dL 2.8 5.4 7.9
(-) F ~45 197 131 158 145 244 358 339 377 2.4 4.0 5.8
(-) F 45~ 166 140 184 162 273 443 399 487 2.6 4.4 7.2
Urea mmol/L (-) M 18~65 288 2.50 2.81 2.7 4.5 7.6 7.2 8.0 mg/dL 16.2 27.0 45.6
(-) F 18~65 334 1.99 2.25 2.1 3.7 7.0 6.7 7.3 12.6 22.2 42.0
Cre μmol/L (-) M 18~65 287 43 52 47 79 105 101 110 mg/dL 0.54 0.90 1.19
(-) F 18~65 333 39 43 41 60 80 77 82 0.46 0.68 0.90
eGFR ml/min/ 1.73m2 (-) M ~45 174 73 85 79 113 144 139 150 ml/min/ 1.73m2 79 113 144
(-) M 45~ 141 52 63 58 89 113 108 119 58 89 113
(-) F ~45 196 84 90 87 107 123 121 125 87 107 123
(-) F 45~ 163 55 68 61 90 105 104 107 61 90 105
Na mmol/L (-) MF 18~65 544 130.1 131.5 131 139 148 147.0 148.7 mmol/L 131 140 148
K mmol/L (-) MF 18~65 543 3.27 3.45 3.4 4.3 5.3 5.24 5.43 mmol/L 3.4 4.3 5.3
Cl mmol/L (-) MF 18~65 538 93.6 95.0 94 104 111 110.3 111.9 mmol/L 94 104 111
Ca mmol/L (-) MF 18~65 619 2.14 2.19 2.17 2.41 2.68 2.66 2.71 mg/dL 8.7 9.6 10.7
aCa mmol/L (-) MF 18~65 618 2.04 2.11 2.08 2.33 2.54 2.52 2.57 mg/dL 8.3 9.3 10.2
IP mmol/L (-) MF 18~65 624 0.77 0.81 0.79 1.11 1.52 1.48 1.55 mg/dL 2.4 3.4 4.7
Mg mmol/L (-) MF 18~65 620 0.63 0.66 0.65 0.83 1.05 1.03 1.07 mg/dL 1.6 2.0 2.6
Fe μmol/L (-) MF 18~65 618 3.1 3.9 3 12 26 25 27 μg/dL 19 65 145
TIBC μmol/L (+) M 18~65 245 38 42 40 57 78 75 81 μg/dL 224 319 437
(-) F 18~65 333 42 46 44 61 85 82 88 246 341 475
UIBC μmol/L (-) M 18~65 287 20 26 23 42 73 69 77 μg/dL 129 235 408
(-) F 18~65 333 27 32 30 49 80 76 84 165 273 447
TBil mmol/L (-) M 18~65 282 2.1 3.0 2.5 7.6 20.6 18.1 23.1 μg/dL 0.15 0.45 1.20
(-) F 18~65 332 2.0 2.5 2.2 5.4 12.4 11.1 13.7 0.13 0.31 0.72
DBil mmol/L (-) M 18~65 289 0.52 0.72 0.62 2.16 6.31 5.56 7.06 μg/dL 0.04 0.13 0.37
(-) F 18~65 327 0.37 0.53 0.45 1.56 3.65 3.21 4.09 0.03 0.09 0.21
Glu mmol/L (+) MF ~45 277 2.96 3.35 3.15 4.61 6.19 5.94 6.44 mg/dL 56 83 111
(-) MF 45~ 301 3.00 3.43 3.22 5.04 7.10 6.64 7.56 58 91 128
TC mmol/L (+) MF ~45 276 3.41 3.55 3.48 4.61 6.28 6.11 6.46 mg/dL 135 178 243
(+) MF 45~ 250 3.27 3.57 3.42 5.10 6.99 6.77 7.21 132 197 271
TG mmol/L (-) M 18~65 286 0.43 0.56 0.50 1.27 4.06 3.63 4.48 mg/dL 44 112 359
(-) F ~45 197 0.36 0.44 0.40 0.92 2.72 2.40 3.03 36 82 240
(+) F 45~ 125 0.45 0.70 0.57 1.28 3.52 2.87 4.17 51 113 311
HDL-C mmol/L (-) M 18~65 287 0.60 0.76 0.68 1.16 1.83 1.73 1.93 mg/dL 26 45 71
(-) F 18~65 333 0.67 0.78 0.72 1.30 2.02 1.92 2.12 28 50 78
LDL-C mmol/L (-) MF ~45 373 1.31 1.53 1.42 2.66 4.28 4.09 4.48 mg/dL 55 103 166
(-) MF 45~ 310 1.22 1.55 1.38 2.98 4.79 4.59 4.98 54 115 185
nonHDL mmol/L (-) M 18~65 290 1.69 2.07 1.88 3.58 5.69 5.43 5.95 mg/dL 73 139 220
(-) F ~45 195 1.56 2.09 1.83 3.17 4.84 4.59 5.09 71 123 187
(-) F 45~ 167 2.09 2.53 2.31 3.85 5.85 5.60 6.10 89 149 226
AST U/L (+) M 18~65 227 11.2 13.5 12 23 38 35.0 40.6 U/L 12 23 38
(+) F 18~65 255 9.6 11.2 10 19 32 29.2 33.8 10 19 32
ALT U/L (+) M 18~65 226 2.9 5.4 4 20 66 55.4 76.4 U/L 4 20 66
(+) F ~45 155 2.4 4.7 4 12 30 26 34 4 12 30
(+) F 45~ 122 2.1 3.7 3 13 43 37 49 3 13 43
LDH U/L (-) MF 18~65 613 82 99 91 181 282 271 294 U/L 91 181 282
ALP U/L (-) M 18~65 285 41 48 45 76 131 124 139 U/L 45 76 131
(-) F ~45 192 28 35 31 60 98 86 111 31 60 98
(+) F 45~ 120 30 46 38 76 126 115 137 38 76 126
GGT U/L (-) M 18~65 288 13 16 14 32 72 65 80 U/L 14 32 72
(+) F ~45 155 9 13 11 20 38 32 43 11 20 38
(+) F 45~ 123 9 15 12 26 62 49 75 12 26 62
CK U/L (-) M 18~65 283 24 38 31 108 254 219 289 U/L 31 108 254
(-) F ~45 196 31 39 35 74 151 133 169 35 74 151
(+) F 45~ 124 24 40 32 80 173 136 210 32 80 173
AMY U/L (-) M 18~65 290 24 31 28 69 142 134 149 U/L 28 69 142
(-) F 18~65 332 21 30 26 60 113 105 122 26 60 113
IgG g/L (+) M 18~65 199 7.68 8.60 8.1 12.5 17.3 16.56 17.94 mg/dL 814 1248 1725
(-) F 18~65 306 8.41 9.10 8.8 13.1 19.4 18.59 20.19 875 1311 1939
IgA g/L (-) MF 18~65 539 0.95 1.16 1.06 2.22 4.43 4.18 4.67 mg/dL 106 222 443
IgM g/L (-) MF 18~65 544 0.41 0.48 0.44 1.19 2.76 2.59 2.93 mg/dL 44 119 276
C3* g/L (-) MF 18~65 546 0.94 1.05 1.00 1.57 2.38 2.29 2.47 mg/dL 100 157 238
C4 g/L (-) MF 18~65 546 0.14 0.15 0.14 0.29 0.50 0.48 0.52 mg/dL 14 29 50
CRP mg/L (+) M 18~65 200 0.0 0.8 0.4 2.4 25.2 13.5 36.8 mg/dL 0.04 0.24 2.52
(-) F 18~65 309 0.3 0.7 0.5 2.7 35.3 25.7 44.9 0.05 0.27 3.53
PTH ng/L (-) MF 18~65 544 19 22 20 45 91 86 96 pg/mL 20 45 91

It is of note that in the derivation of RIs for lipids and PTH, possible influence of lipid lowering drugs and vitamin D and/or calcium were considered. However, the use of statin drugs was reported only by four volunteers, vitamin D by two, and calcium by one. Therefore, we ignored those external factors in the derivation of respective RIs.

5. Comparison of Egyptian RVs with other populations

Fig 2 shows between-ethnic group comparison of RVs for four analytes that we identified as peculiar to Egyptian population from what reported in the C-RIDL’s global study [8,11].

Fig 2. Side-by-side comparison of RVs for TBil, TG, HDL-C, and CRP between Egyptian and other population.

Fig 2

RVs of ten countries were compared by box-whisker charts. The box represents central 50% ranges, the vertical bar at the box represents the median. The span of the horizontal bar represents central 95% interval. The countries were subgroups by ethnicity: Middle Easterners: “Saudi Arabia, Turkey” with the central box shaded in red, Asians: “Japan, China, India” shaded in blue, and Caucasians: “USA, Russia, Argentina, South African Caucasians (ZA-Cau)” shades in green. The full-range vertical line represents median RV of Egyptian male (blue) and female (red).

They were RVs for TBil, TG, HDL-C, and CRP. Comparison were made among RVs of 10 countries collaborated in the global study. They were subgrouped by ethnicity as Middle Easterners: “Egypt, Saudi Arabia, Turkey”, Asians: “Japan, China, India”, and Caucasians “USA, Russia, Argentina, South African Caucasians (ZA-Cau)”. It is notable that Egyptian RVs for TBil and HDL-C are shifted to the lower side, while those for TG and CRP are shifted upwards. These trends are generally similar among Middle Easterners.

6. Comparison of Egyptian BMI-related changes with other populations

To further explore how consistent the BMI related changes were across the ten countries that collaborated in the C-RIDL global study, Fig 3 was drawn for six nutritional markers namely LDL-C, HDL-C, ALT, GGT, CRP, and UA.

Fig 3. Ethnic differences in regression line between BMI and RVs of nutritional markers.

Fig 3

Comparison of least-square linear regression lines between BMI and RVs of six nutritional markers among ten countries: Middle Easterners: “Egypt, Saudi Arabia, Turkey” in graded red, Asians: “Japan, China, India” in graded blue, and Caucasians “USA, Russia, Argentina, South African Caucasians (ZA-Cau)” in graded green.

Discussion

Mean±SD of BMI in our study was 28.2±5.0 kg/m2. It is higher than those reported by most collaborating countries adopting the IFCC C-RIDL protocol namely [9]: Russia (26.6±4.5), South African Caucasians (25.9±3.7), Japan (22.9±2.6), China (23.6±3.0), Philippines (23±3.8), Saudi Arabia (28.5±5.6), Turkey (26.6±3.6), and India (males: 24.6 ± 3.46, females: 24.5 ± 4.4) [10]. Relevant to the obesity is the sedentary lifestyle reported by 98% of our participants, leaving only 2% exercising regularly at a rate of one to six days a week. The high BMI in comparison to other countries poses an interesting question regarding the effect of BMI on the derived RI.

The interim report by C-RIDL on the global multicenter study [5,9] highlighted close association of BMI in terms of rp with the following analytes: C3, ALT, CRP, UA, GGT, HDL-C, TG, LDL-C, C4, and AST in that order of strength in males, and similarly in females. In this study, we observed a similar association of BMI with those nutritional/inflammatory markers, but at much weaker degree: i.e., values of |rp| for ALT, CRP, GGT, and TG were all below 0.2.

For TC, UL of Egyptians was 6.28 mmol/L for both sexes <45 years, comparable to other studies: Turkey 6.2 [11], India 6.2 [10], Saudi Arabia 6.36 [12] and China 6.16 mmol/L [13], while among individuals >45 years, the Egyptian UL (6.99 mmol/L) was the highest reported followed by Indian UL of 6.7 (M) and 6.6 (F) mmol/L. Applying the LAVE procedure to TC was effective in lowering the UL for <45 years of age, but not for UL of >45 years. This failure of LAVE was previously encountered in the Indian study [10] and was attributed then to a weaker association among reference test items used for the LAVE procedure. With regard to HDL-C, Fig 2 shows a tendency of Egyptians to have the lowest LL of 0.68 (M) and 0.72 (F) mmol/L followed by India that reported an LL of 0.70 (M) and 0.80 (F) mmol/L. Egyptian TG showed higher ULs of 4.06 (M), 2.72 (F:<45 years), 3.52 (F: ≥45) mmol/L than the ULs reported from Turkey 3.39 (M), 2.52 (F), and Saudi Arabia 3.58 (M), 1.60 (F) mmol/L. The contrast is even stronger if compared with Asian and Caucasian.

RIs for CRP RI in this study was among the highest reported with UL of 25.2 (M) and 35.3 (F) mg/L. This female predominance of high CRP was previously reported [10,12]. The UL of C4(0.50g/L) was comparable to both the manufacturer’s UL (0.40 g/L) and the previously reported UL for Indian of 0.55 g/L [10]. However, C3 UL was obviously higher (2.38 g/L) compared to both the manufacturer’s UL (1.8g/L) and previously reported UL by the latter study 1.82g/L. C3 is an acute phase protein. Increased levels may indicate a low-grade inflammatory response seen among inhabitants of equatorial and subequatorial terrains [14] or an underlying inflammation related to metabolic syndrome [15].

We explored the difference in regression lines between BMI and RVs of six nutritional markers (LDL-C, HDL-C, ALT, GGT, CRP, and UA) across ten countries that collaborated in the global study. It is notable that regression lines showed different slopes, very steep in some countries (implying slight change induces profound effect on the RVs) while moderate to gentle in others. Taking HDL-C as an example, it was previously [16] reported that the HDL-C concentration did not reduce linearly as BMI advanced >30 kg/m2. This could explain the wide differences in the regression line slopes among the different populations listed in Fig 3, and the tendency of the Middle Eastern populations (Turkey, Saudi Arabia, and Egypt) with higher BMI to have a weaker slope compared to other populations (Japan, China, India) with lower mean BMI. This finding may explain a relatively low prevalence of metabolic syndrome by NECP ATPIII criteria [17] among the participants (calculated as 20% of males and 16.1% of females) despite high obesity rates. However, the predominance of dyslipidemia revealed in this study is an alarming signal in consideration of high cardiovascular mortality in Egyptian [18].

Regarding regional difference in RVs, the comparison of DBil RIs indicated a lower DBil among southern Egyptians. Nevertheless, we could not derive a separate RI for this group due to the small number of this particular subset. This finding deserves further study to evaluate whether it is due to a genetic variation in bilirubin conjugation pathway or a mere reflection of a different nutritional state.

Regarding the influence of smoking, the habit was self-reported by 27.5% of male and 1.1% of females. Previous reports are mixed in the direction of the relationship between smoking and IgA: increased in some studies [19,20], while reduced in others [21]. In our study, the IgA was positively correlated with smoking. Whereas, smoking habit-related lowering of IgG or HDL-C has been reported [9,22]. Such a finding was not observed in this study despite the appreciable number of male smokers.

Conclusion

Standardized RIs for 34 chemistry analytes among Egyptians were established considering various sources of variations. They can be use in common in Egypt except a few analytes that showed moderate differences between northern and southern Egypt. Despite the high prevalence of obesity in Egyptians, the RVs of nutritional markers were found less sensitive to increased BMI, especially in females, when compared to other collaborating countries. From an international perspective, this study revealed that RVs of Egyptian feature low HDL-C and TBil, and high TG and CRP.

Supporting information

S1 Fig. Comparison of panel test results from two testing centers and assigned values.

Value-assigned panel of sera were tested in Cairo and Alexandria University and their test results were compared with the assigned values (11]. The linear regression was computed by major-axis regression line. Merging of volunteers’ test results were done by aligning them to the assigned values.

(PDF)

S2 Fig. Sex and age-related changes in RVs of all parameters.

RVs were partitioned by sex (male:M, female: F) and age-subgroups (~29, 30~39, 40~49, 50~). The box in the center of each scattergram indicates the mid 50% range of RVs, and its central vertical bar represents the median. The data size is shown at the right bottom of the age group labels. Because no secondary exclusion was done for RVs, the range of the scatter plot may not match to the RI to be determined.

(PDF)

S3 Fig. Between-region differences in RVs observed in five analytes.

RVs of five analytes, TBil, DBil, Glu, TG, and LDL-C that showed high SDR for between-region differences (SDRreg) were partitioned into four groups by sex and region (North vs. South Egypt). Values of BMI were also shown subgrouped by sex and region to prove that the regionality is independent of the levels of BMI.

(PDF)

S1 Table. The assay methods and traceability with formulae for calculated parameters.

(XLSX)

S2 Table. Demographic profile of the participants.

(XLSX)

S3 Table. The list of all RIs partitioned by sex.

(XLSX)

S4 Table. The list of all RIs partitioned by sex and age.

(XLSX)

S1 Data

(XLSX)

Abbreviations

aCa

adjusted calcium

Alb

albumin

ALP

alkaline phosphatase

ALT

alanine aminotransferase

AMY

amylase

ANOVA

analysis of variance

AST

aspartate aminotransferase

BMI

body mass index

BR

bias ratio

C3

complement component 3

C4

complement component 4

Ca

calcium

CI

confidence interval

CK

creatine kinase

Cl

chloride

Cre

creatinine

C-RIDL

committee on reference intervals and decision limits

CRP

C-reactive protein

DBil

direct bilirubin

eGFR

estimated glomerular filtration rate

Fe

iron

GGT

γ-glutamyl transferase

Glb

globulin

Glu

glucose

HDL-C

high-density lipoprotein cholesterol

IgA

immunoglobulin A

IgG

immunoglobulin G

IgM

immunoglobulin M

IP

inorganic phosphate

K

potassium

LAVE

latent abnormal values exclusion

LDH

lactate dehydrogenase

LDL-C

low-density lipoprotein cholesterol

LL

lower limit

Mg

magnesium

MRA

multiple regression analysis

Na

sodium

nonHDL

non-HDL-C

PTH

parathyroid hormone

RI

reference interval

rp

partial correlation coefficient

RV

reference value

SD

standard deviation

SDR

standard deviation ratio

SV

Source of variation

TBil

total bilirubin

TC

total cholesterol

TG

triglycerides

TIBC

total iron binding capacity

TP

total protein

UA

uric acid

UIBC

unsaturated iron binding capacity

UL

upper limit

Data Availability

All relevant data are within the paper and it's supporting information files.

Funding Statement

The part of the study that took place at Cairo University has been funded by a Cairo University research fund awarded to HB and MS. The part fulfilled in Alexandria university as well as all the immunoturbidimetric assays of the whole study were funded by the Japan Society for the Promotion of Science (JSPS), Scientific Research Fund number (16H02771: 2016–2019) awarded to KI. None of the authors received any salaries from any commercial body, neither were there any sponsorship of any sort.

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Decision Letter 0

Nguyen Tien Huy

18 Sep 2020

PONE-D-20-21548

Establishment of Reference Intervals of Clinical Chemistry Analytes for the Adult Population in Egypt

PLOS ONE

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Reviewer #1: First the topic is so interesting and the benefits derived from it would be so important in the future.

1/ adult population includes those >65 years but this age class was some kind of ''ignored'' throughout the whole study, not even age and gender equalization was done for this class justify this please ?

2/ Are areas of origin of participant representative of all the country ?

3/ Was a sample size evaluation done before conducting the study ?

4/ The health status questionnaire provided for participant please provide a copy of it so that we can evaluate the sample

5/ So only two laboratories agreed to participate or were they the only ''reference'' lab , else how were participants divided between them ?

6/ Suppl table 3 and table 2 no age>65 y provided

7/ Suppl table 3 why stratifying by age 45y ?

8/ Method for calculating eGFR, aCa, TIBC, HDL were not provided

9/ assay timeline for samples collected of 2-3 months and 8 months reference for that please ?

10/ Dividing Egypt into North and South was done according to what reference ?

11/ Please mention clearly inclusion and exclusion criteria of participants as no criteria provided

12/ ''did not deny alcohol drinking'' and low smoking status (mainly female++) --> Response Bias suspected

else what about other drugs consumption ? was a thorough history of patients done before with the questionnaire?

13/ Supp fig1 ''Asn val'' stands for what ?

14/ Discussion

Not well elaborated and lacks many referencing

*I was expecting a reference on the prevalence of obesity in Egypt

*i was expecting a reference on the prevalence of smoking, alcohol drinking, drugs consumption, and other habits in the population so that was evaluate if the sample results are possible to generalize to the whole population

* bilirub level reduced--> maybe a reference on the prevalence of cholecystitis or cholangitis in Egypt

* no relation between IgG and HDL provided a possible explanation or a reference for that

15/ NO stating of NEW results in the discussion section please like fig3 or the prevalence of metabolic syndrome (which by the way suppose you calculated BP and wrist circumference of the sample ??)

----> all results should be first mentioned in the results section

Reviewer #2: please check below or the attached pdf file:

Editor in Chief, PLOS ONE

Establishment of Reference Intervals of Clinical Chemistry Analytes for the Adult

Population in Egypt

PONE-D-20-21548

Reviewer(s)' Comments to Author:

Reviewer:

Comments to the Author

The manuscript established the reference interval for 34 major chemistry analytes and discussed the sources of variation. The study is part of the global reference interval study of the IFCC.

The manuscript has many details about data analysis but some core aspects have weakened the manuscript which need to be answered and corrected.

Specific comments

Manuscript:

Material and methods

1. Study design

- The study was performed in two different institutes. Therefore, the ethical approval number should be unified but it seems Cairo University ethical approval number only has been mentioned. What about Medical Research Institute of Alexandria University was there any specific ethical approval number? If yes then please mention it.

2. Recruitment of reference individuals

“A total of 691 apparently healthy Egyptian volunteers were recruited from Cairo, Alexandria, Delta, Suez Canal, and Upper Egypt; Fayoum, Beni-Sueif or areas southern as faras Nubia”. It is not so clear if samples were collected from volunteers from each of these locations or volunteers came to one cite for samples to be collected.

4. Analytes and measurements

- Page 2: Suppl table 1: does not show the formulae for the calculated parameters

Globulins (Glb), estimated glomerular filtration rate (eGFR), adjusted calcium (aCa), total iron binding capacity (TIBC), and non-high-density lipoprotein (nonHDL).

- PTH is the only anlyte based on immunoassay measurement. Why it has been included in this study in particular while the study is dedicated to chemistry tests?

- PTH can be affected by calcium and vitamin D intake, did the author consider them when RI for PTH has been derived (as exclusion criteria). The same thing for Iron. If yes, then how many subjects were excluded?

- When the study was started (month/year) and when it was ended (month/year)?

- Page 3: IgG, IgM, IgA, C3, C4, CRP and PTH were measured 8 months after the collection, why and how their stability was assessed?

5. Between-center method comparison and standardization

- A panel composed of 50 healthy volunteers' sera with assigned values for 34 chemistry and immunoturbidimetry analytes was measured by the two different centers for merging and standardization of test results. How this panel of samples was transferred physically from one center to another? And how their stability was guaranteed?

- A summarized table is needed to show number of samples, BMI, sex distribution, age, BP and other anthropometric measurements for each cite and in total.

- In this study, samples were analyzed in two independent labs. The panel was used to standardize test results between both cites. In other involved countries in the global study all samples were sent to the main lab for analysis and a panel was used to standardize results between different labs. Clarify if the protocol followed in this study contradicts the harmonized protocol created by the C-RIDL or not.

- For between-day quality control, no data are shown.

Results:

- Page 6: The head title in Table 1 “South Egy” to be changes to “Region”.

- Table 3: TBil and DBil unit mmol/L to be corrected

TP, Alb, Glb unit g/L to be corrected in RI in conv, unit.

- Page 9: Supp Fig 3 shows low glucose, DBil and TBil for samples from South Egypt. In addition to this in Figure 2, TBil is the lowest compared to other countries (Glu is not included in the figure). It seems these outcomes are not compatible with the prevalence and rates of diabetes and hepatitis in Egypt compared to other countries.

Did the author investigate the possibility of the presence of any gap in the followed C-RIDL protocol regarding samples integrity i.e. during samples collection, transportation, delay in separation, sun exposure etc. before samples were analysed.

Discussion:

- Page 12: “Mean BMI in our study was 28.2±5.0” the unit needs to be added

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Reviewer #1: Yes: Nacir Dhouibi

Reviewer #2: No

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Submitted filename: reviewer comments PONE-D-20-21548.pdf

PLoS One. 2021 Mar 19;16(3):e0236772. doi: 10.1371/journal.pone.0236772.r002

Author response to Decision Letter 0


26 Oct 2020

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

Reviewer #1: First the topic is so interesting and the benefits derived from it would be so important in the future.

Our response→ We are grateful for the detailed review of our paper and offer of invaluable comments for improvement.

1/ adult population includes those >65 years but this age class was some kind of ''ignored'' throughout the whole study, not even age and gender equalization was done for this class justify this please ?

Our response→ The C-RIDL’s harmonized protocol recommended the adult age range be set to 18~65 with flat age and sex distribution. However, for subjects above 65 years were requested to be included for use in elucidating the age-related changes of reference values in the high age ranges by pooling the results. Therefore, we did not include the results in our analysis except for determination of RIs for subjects above 65 years of age.

In the revised manuscript, we make clear of this point in the Method as below

“Subjects were selected so that at least 80% were from the age of 18 to 65 years, with equal gender mix and age distributions, except for individuals over 65 years of age. Test results of the high age groups were not included in the determination of RIs for the main age group (18~65), but included in the derivation of RIs for the age group ≥65 years. The results of the higher age group were also meant for use by C-RIDL in elucidating age-related change profiles of RVs in a wide range by merging all results worldwide.”

2/ Are areas of origin of participant representative of all the country ?

Our response→ Yes, the regions included in the study represents Egypt, Nile valley, along with coastal cities which are the inhabited regions of Egypt. To make clear of the distribution of the regions, in the revised article we gave more clearer description as follows: “A total of 691 apparently healthy Egyptian volunteers were recruited from Cairo region [Cairo, Giza, Helwan], Alexandria, the Nile Delta [Beheyra, Daqahlia, Damietta, Gharbia, Kar Elshiekh, Menoufia], South (Upper) Egypt [Fayoum, Beni-Sueif , Minya, Assiut, Qena, and Nubia], and the Suez Canal [Port Said and Suez]”.

3/ Was a sample size evaluation done before conducting the study ?

Our response→ In the C-RIDL’s harmonized protocol, the rationale for the sample size is described as follows:

“The target sample size of practically attainable level from each country is set at minimum 500 or more, greater than twice the minimum number of 120×2 (male and female) recommended by C28-A3, so that country-specific RIs can be obtained in a more reproducible manner. The number is at least enough to make between-country comparisons of test results with a power of detecting SD ratio of 0.25 (SD due to a given source of variation relative to between-individual SD), allowing errors of α<0.05 and β<0.2, in statistical hypothesis testing of difference in means between any two countries done separately for each gender.”.

We targeted the sample size of ≥680 that exceeds the suggested minimum of 500 (both gender combined).

4/ The health status questionnaire provided for participant please provide a copy of it so that we can evaluate the sample

Our response→ Following the suggestion, we chose to include the questionnaire in Arabic and English as a supplemental material in the revised manuscript.

5/ So only two laboratories agreed to participate or were they the only ''reference'' lab , else how were participants divided between them ?

Our response→ The two labs agreed to act as “reference lab”. The samples were divided as follow: Cairo University recruited along the Nile river, from the Nile delta north to Nubia in the south. Alexandria University covered the coastal region along the Mediterranean. Both labs recruited from the Suez Canal region. However, we did not include this detailed information in the revised text.

6/ Suppl table 3 and table 2 no age>65 y provided

Our response→ As we described above for “1/” we just included test results of subjects≥65 years for derivation of RIs for the age group≥45 years, and thus they were not ignored in the Suppl Table 3.

7/ Suppl table 3 why stratifying by age 45y ?

Our response→ Judged from the C-RIDL interim report that demonstrated age-related change profile of major analytes [https://ars.els-cdn.com/content/image/1-s2.0-S0009898116303898-mmc4.pdf], most of the age-related changes occur in females starting from 40 years until 60 years. A candidate for demarcation point of year was either 45 or 50 year of age. We arbitrarily set the demarcation point as 45 years in order to get a higher precision in determining RIs: i.e., the number of females above 50 (n=117) was much smaller than those above 45 (n=165).We commented on this reasoning in the Methods of the revised manuscript as “The partitioning of RVs by age was done arbitrarily at 45 years to ensure enough data size for the higher age group ”.

8/ Method for calculating eGFR, aCa, TIBC, HDL were not provided

Our response→ We appreciate for pointing out the problem of missing formulae for the calculating parameters, which were inadvertently missed out in Suppl Table 1. We added the formulae in the bottom of the table.

9/ assay timeline for samples collected of 2-3 months and 8 months reference for that please ?

Our response→ The difference in the period of storage before measurements (2-3 months or general chemistry, and 8 months for immunochemistry) was simply caused by availability of support for assay reagents. If this query was made for a concern on the stability of serum specimens stored at −80ºC, please refer to our responses to Reviewer-2’s query on sample stability below.

10/ Dividing Egypt into North and South was done according to what reference ?

Our response→ We realized that we did not give explanation on the distinction of regions. Egypt is split historically and geographically into, North (Lower) Egypt comprised of the Nile Delta Northern to Cairo reaching Mediterranean, and South (Upper) Egypt comprised of cities along the Nile river banks southern to Cairo reaching the Sudanese borders. In this paper, we used the terminology of North and South Egypt instead of the Lower and Upper Egypt conventionally used in Egypt. Accordingly we added the following description in the Methods: “Dividing the Egyptian population to north and south was adopted in respect to demographic and social differences between the two regions. Osman et al., 2016.”

Reference: https://assets.publishing.service.gov.uk/government/uploads/system/uploads/attachment_data/file/793089/Egypt_Toponymic_Factfile-March_2019.pdf

11/ Please mention clearly inclusion and exclusion criteria of participants as no criteria provided

Our response→ Following the suggestion, we added the inclusion/exclusion criteria in the revised Methods as follows: “We followed the inclusion and exclusion criteria of C-RIDL protocol: Participants of the study were included if they are feeling subjectively well, older than 18 years with no upper limit of age for participation. Those who take less equal 3 drugs for minor conditions or nutritional supplements were allowed.. All the following were excluded; participants who were known diabetics on insulin or oral therapy, , who had a positive history of a hepatic or renal disease, who had an grossly abnormal test results in the previous year, who were hospitalized within the previous 4 weeks prior to joining the study, who donated blood in the previous 3 months, known carrier for HCV, HBV or HIV, who participated recently in a clinical trial for an investigational product.”

12/ ''did not deny alcohol drinking'' and low smoking status (mainly female++) --> Response Bias suspected else what about other drugs consumption ? was a thorough history of patients done before with the questionnaire?

Our response→ We understand the expression sounds odd, however, 90% of the Egypt’s population are of Muslim faith. Although alcohol is available for purchase, yet, its consumption is frowned upon in the public eyes, thus the participants who candidly admitted to its use in this study were minimum. According to Rabie et al., 2020, the prevalence of alcohol use in the past 12 months is 2.9% of the population. Therefore, we believe there is no response bias in the status of alcohol drink. In any case, we added a supplemental table showing the demographic information of the volunteers including habits of smoking and drinking alcohol as Suppl Table 2.

With regards to drugs, we added this information in the revised Results. “from the health status questionnaire, we found regular use of drugs in the following frequencies: anti-hypertensives in 13 volunteers (1.9%), analgesics 51 (7.5%), anti-allergic 10 (1.6%), antacid 24 (3.5%), statin 4 (0.6%), others 8 (1.2%). We disregard the information in the subsequent analyses because they were all minor and small in dosage”.

13/ Supp fig1 ''Asn val'' stands for what ?

Our response→ We realized the problem of missing description for the abbreviation. We added it in the footnote of the figure as “assigned values”.

14/ Discussion

Not well elaborated and lacks many referencing

*I was expecting a reference on the prevalence of obesity in Egypt

*i was expecting a reference on the prevalence of smoking, alcohol drinking, drugs consumption, and other habits in the population so that was evaluate if the sample results are possible to generalize to the whole population

* bilirub level reduced--> maybe a reference on the prevalence of cholecystitis or cholangitis in Egypt

* no relation between IgG and HDL provided a possible explanation or a reference for that

Our response→ The WHO has reported a significantly high prevalence of obesity in Egypt among six other Arab world countries, ranging from 74% to 86% in women and 69% to 77% in men. Also, Egypt is suffering from high tobacco burden, 40.5% of men, 0.3% of women, and 20.3% of Egypt’s population overall are daily tobacco smokers. We understand that the prevalence of cholecystitis and cholangitis is irrelevant to the levels of bilirubin in healthy individuals, and thus, we could not add any reference on its prevalence in Egypt in comparison to other countries. In any case, please note that we added Suppl Table 2 showing the demographic information regarding BMI, smoking and drinking habits.

15/ NO stating of NEW results in the discussion section please like fig3 or the prevalence of metabolic syndrome (which by the way suppose you calculated BP and wrist circumference of the sample ??)

----> all results should be first mentioned in the results section

Our response→ We appreciate for pointing out the problem for us. We moved the explanation on Fig.3 to the end of the Results section under the subheading of “Comparison of Egyptian BMI-related changes with other populations”.

Reviewer #2: please check below or the attached pdf file:

Comments to the Author

The manuscript established the reference interval for 34 major chemistry analytes and discussed the sources of variation. The study is part of the global reference interval study of the IFCC.

The manuscript has many details about data analysis but some core aspects have weakened the manuscript which need to be answered and corrected.

Our response→ We are grateful for the critical review of our paper and the kind offer of invaluable comments to improve it.

Specific comments

Manuscript:

Material and methods

1. Study design

- The study was performed in two different institutes. Therefore, the ethical approval number should be unified, but it seems Cairo University ethical approval number only has been mentioned. What about Medical Research Institute of Alexandria University was there any specific ethical approval number? If yes then please mention it.

Our response→ The study protocol was approved by Cairo University and the protocol included collecting cases from several governorates and performing testing in more than one lab (as per the geographical distribution), and since we were using the exact same protocol in all locations we used only one ethical approval which is that of Cairo University.

2. Recruitment of reference individuals

“A total of 691 apparently healthy Egyptian volunteers were recruited from Cairo, Alexandria, Delta, Suez Canal, and Upper Egypt; Fayoum, Beni-Sueif or areas southern as faras Nubia”. It is not so clear if samples were collected from volunteers from each of these locations or volunteers came to one cite for samples to be collected.

Our response→ In the revised text, we made it clear where the samples were collected in response to the comment from Reviewer-1. The sampling were done at each location and specimens were brought to either of the two central labs located in Cairo and Alexandria University.

4. Analytes and measurements

- Page 2: Suppl table 1: does not show the formulae for the calculated parameters

Globulins (Glb), estimated glomerular filtration rate (eGFR), adjusted calcium (aCa), total iron binding capacity (TIBC), and non-high-density lipoprotein (nonHDL).

Our response→ We appreciate for pointing out the problem of missing formulae for the calculating parameters, which were inadvertently missed out in Suppl Table 1. We added the formulae in the table.

- PTH is the only anlyte based on immunoassay measurement. Why it has been included in this study in particular while the study is dedicated to chemistry tests?

Our response→ The reason why we included just PTH from among many analytes measured by immunoassays was simply a matter of limited budget to acquire reagents.

- PTH can be affected by calcium and vitamin D intake, did the author consider them when RI for PTH has been derived (as exclusion criteria). The same thing for Iron. If yes, then how many subjects were excluded?

Our response→ From the health-status questionnaire, we obtained information on regular use of supplements and medications from all volunteers. However, there were only 3 individuals with use of vitamin D and/or calcium. Therefore, we regarded the serum levels of PTH were not affected by the external factor. We wrote about this point in the Results as follows: “It is of note that in the derivation of RIs for lipids and PTH, possible influence of lipid lowering drugs and vitamin D and/or calcium were considered. However, the use of statin drugs was reported only by four volunteers, vitamin D by two, and calcium by one. Therefore, we ignored those external factors in the derivation of respective RIs.”

- When the study was started (month/year) and when it was ended (month/year)?

Our response→ Study was approved to start on January 31st, 2015, and the final data analysis ended early 2020. We added this study period in the revised manuscript as “The study was approved by the ethical committee of Cairo University (N-13-2015) on January 31st, 2015, and the final data analysis ended early 2020.”

- Page 3: IgG, IgM, IgA, C3, C4, CRP and PTH were measured 8 months after the collection, why and how their stability was assessed?

Our response→ With difficulty of recruiting sufficient number of volunteers from many parts of Egypt, we were obliged to take many months to achieve our target sample size of >650. Therefore, as described in the C-RIDL harmonized protocol [doi:10.1515/cclm-2013-0249], we stored all serum specimens at −80ºC until the time of collective measurement. The stability of serum specimens stored at −80ºC has been generally assumed in the protocol. However, we confirmed it as described just below, including the stability even for C3, C4, PTH, and insulin, which are known to be unstable at room temperature and regular freezing temperature.

5. Between-center method comparison and standardization

- A panel composed of 50 healthy volunteers' sera with assigned values for 34 chemistry and immunoturbidimetry analytes was measured by the two different centers for merging and standardization of test results. How this panel of samples was transferred physically from one center to another? And how their stability was guaranteed?

Our response→ Two sets of the serum panel (a second lot produced in March 2014 in Japan) was transported to Cairo in 2015, packed in dry ice. Transportation within Egypt of the one for Alexandria was also done packed in dry ice. The stability of almost any analyte in serum specimens if stored at −80ºC is well documented [doi:10.1016/j.clinbiochem.2012.03.029].

However, to confirm the finding, we evaluated the reproducibility of panel test results measured 1 to 4 years after storage at −80ºC using the same analyzer. We could prove a perfect stability of 29 major chemistry analytes except LDH (S-Fig. 1), and of 6 representative analytes measured by immunoassays including PTH (S-Fig.2). Although test results of LDH seem lowered in the second testing, it turned out to be due to between-day bias of measurement, judged from S-Fig. 3, which demonstrates fluctuation of panel test results (n=50) measured at 14 labs over the 5 year period (2014~2019) including Egypt.

Please allow us not to include S-Fig. 1 to 3 in this paper, because we plan to report the findings in a different paper.

- A summarized table is needed to show number of samples, BMI, sex distribution, age, BP and other anthropometric measurements for each cite and in total.

Our response→ Following the suggestion. We newly made a table (Suppl Table 2) showing those demographic information. Therefore, the original Suppl Table 2 was renumbered accordingly.

- In this study, samples were analyzed in two independent labs. The panel was used to standardize test results between both cites. In other involved countries in the global study all samples were sent to the main lab for analysis and a panel was used to standardize results between different labs. Clarify if the protocol followed in this study contradicts the harmonized protocol created by the C-RIDL or not.

Our response→ We understand we followed the protocol faithfully. The test results of the two central labs were merged based on the panel test results. For the standardized analytes, test results of the two labs were first aligned to the assigned values and then merged. Whereas, for non-standardizable analytes test results were merged to the values of Cairo University by use of major axis regression line: (Cairo-value) = a + b×(Alex-value).

- For between-day quality control, no data are shown.

Our response→ According to the suggestion, we added between-day CVs to the Suppl Table 1 that lists names and abbreviations of all analytes and analytical methods.

Results:

- Page 6: The head title in Table 1 “South Egy” to be changes to “Region”.

Our response→ We changed the notation accordingly.

- Table 3: TBil and DBil unit mmol/L to be corrected

TP, Alb, Glb unit g/L to be corrected in RI in conv, unit.

Our response→ We appreciate for letting us know of the problem.

- Page 9: Supp Fig 3 shows low glucose, DBil and TBil for samples from South Egypt. In addition to this in Figure 2, TBil is the lowest compared to other countries (Glu is not included in the figure). It seems these outcomes are not compatible with the prevalence and rates of diabetes and hepatitis in Egypt compared to other countries.

Did the author investigate the possibility of the presence of any gap in the followed C-RIDL protocol regarding samples integrity i.e. during samples collection, transportation, delay in separation, sun exposure etc. before samples were analysed.

Our response→ For the finding in Supp Fig 3 of low DBil and TBil in South Egypt, we postulate that it may be attributed to a genetic factor with no pertinent information to explain the finding. However, we do not think it was caused by a difference in the prevalence of hepatitis in the two regions (North vs. South). In fact, we denied the presence of any regional difference in the levels of AST and ALT. For the finding of low Egyptian TBil, we again assume it due to genetic/ethnic factor with a low level of TBil in Turkey.

Although we did not show the figures comparing Glu levels with other countries, we did not find any difference in the levels of Egyptian Glu. The low levels of Glu in females of South Egypt, we do not think it due to a problem in sample processing, because such a finding was not apparent in males. We assume it due to less intake of carbohydrate in females of the South. In any case, we followed the C-RIDL protocol to ensured sample integrity at all times, and thus we do not think of any problem in preanalytical processing.

Discussion:

- Page 12: “Mean BMI in our study was 28.2±5.0” the unit needs to be added

Our response→ We appreciate for letting us know of the problem. We added the unit of kg/m2.

Attachment

Submitted filename: Responses to Reviewers with S-Figs 1-3.pdf

Decision Letter 1

Colin Johnson

10 Dec 2020

Establishment of Reference Intervals of Clinical Chemistry Analytes for the Adult Population in Egypt

PONE-D-20-21548R1

Dear Dr. Ichihara,

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Colin Johnson, Ph.D.

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

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Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

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Reviewer #1: Yes

Reviewer #2: Yes

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Reviewer #1: I Don't Know

Reviewer #2: Yes

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Reviewer #1: Yes

Reviewer #2: Yes

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Reviewer #1: Yes: Nacir Dhouibi

Reviewer #2: Yes: Dr Anwar Borai, King Abdullah International Medical Research Center, King Saud bin Abdulaziz University for Health Sciences, Pathology, King Abdulaziz Medical City, Jeddah, Saudi Arabia.

Acceptance letter

Colin Johnson

23 Dec 2020

PONE-D-20-21548R1

Establishment of Reference Intervals of Clinical Chemistry Analytes for the Adult Population in Egypt

Dear Dr. Ichihara:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

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Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

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on behalf of

Dr. Colin Johnson

Academic Editor

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Fig. Comparison of panel test results from two testing centers and assigned values.

    Value-assigned panel of sera were tested in Cairo and Alexandria University and their test results were compared with the assigned values (11]. The linear regression was computed by major-axis regression line. Merging of volunteers’ test results were done by aligning them to the assigned values.

    (PDF)

    S2 Fig. Sex and age-related changes in RVs of all parameters.

    RVs were partitioned by sex (male:M, female: F) and age-subgroups (~29, 30~39, 40~49, 50~). The box in the center of each scattergram indicates the mid 50% range of RVs, and its central vertical bar represents the median. The data size is shown at the right bottom of the age group labels. Because no secondary exclusion was done for RVs, the range of the scatter plot may not match to the RI to be determined.

    (PDF)

    S3 Fig. Between-region differences in RVs observed in five analytes.

    RVs of five analytes, TBil, DBil, Glu, TG, and LDL-C that showed high SDR for between-region differences (SDRreg) were partitioned into four groups by sex and region (North vs. South Egypt). Values of BMI were also shown subgrouped by sex and region to prove that the regionality is independent of the levels of BMI.

    (PDF)

    S1 Table. The assay methods and traceability with formulae for calculated parameters.

    (XLSX)

    S2 Table. Demographic profile of the participants.

    (XLSX)

    S3 Table. The list of all RIs partitioned by sex.

    (XLSX)

    S4 Table. The list of all RIs partitioned by sex and age.

    (XLSX)

    S1 Data

    (XLSX)

    Attachment

    Submitted filename: reviewer comments PONE-D-20-21548.pdf

    Attachment

    Submitted filename: Responses to Reviewers with S-Figs 1-3.pdf

    Data Availability Statement

    All relevant data are within the paper and it's supporting information files.


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