Table A1.
Publicly available genome sequences from the Global Initiative on Sharing All Influenza Data (GISAID.org) used for bioinformatics analysis (26 January 2021).
| Sequence Identifier on GISAID | Submitting Laboratory | Originating Laboratory | Analysis |
|---|---|---|---|
| EPI_ISL_536400 | MRC-University of Glasgow Centre for Virus Research | Fareham Creek Veterinary Surgery | isolate from cat |
| EPI_ISL_487275 | Department of Veterinary Pathology, University of Liege-FARAH | Department of Veterinary Pathology, University of Liege-FARAH | isolate from cat |
| EPI_ISL_717979 | Laboratory of Biology, Department of Medicine, Democritus University of Thrace, Alexandroupolis, Greece | Laboratory of Microbiology and Infectious Diseases, Faculty of Veterinary Medicine, Aristotle University of Thessaloniki, University Campus, 541 24, Thessaloniki, Greece | isolate from cat |
| EPI_ISL_722300 | Erasmus Medical Center | Dutch COVID-19 response team | isolate from cat |
| EPI_ISL_683164 | Albertsen Lab, Department of Chemistry and Bioscience, Aalborg University, Denmark | Department of Virus and Microbiological Special Diagnostics, Statens Serum Institut, Copenhagen, Denmark | isolate from cat |
| EPI_ISL_683165 | Albertsen Lab, Department of Chemistry and Bioscience, Aalborg University, Denmark | Department of Virus and Microbiological Special Diagnostics, Statens Serum Institut, Copenhagen, Denmark | isolate from cat |
| EPI_ISL_683166 | Albertsen Lab, Department of Chemistry and Bioscience, Aalborg University, Denmark | Department of Virus and Microbiological Special Diagnostics, Statens Serum Institut, Copenhagen, Denmark | isolate from cat |
| EPI_ISL_759858 | School of Public Health, The University of Hong Kong | School of Public Health, The University of Hong Kong | isolate from cat |
| EPI_ISL_873040 | WHO National Influenza Centre Russian Federation | WHO National Influenza Centre Russian Federation | isolate from cat |
| EPI_ISL_873210 | Virology, Ecole Nationale Veterinaire de Toulouse | Virology, Ecole Nationale Veterinaire de Toulouse | isolate from cat |
| EPI_ISL_811147 | WHO National Influenza Centre Russian Federation | WHO National Influenza Centre Russian Federation | isolate from cat |
| EPI_ISL_437349 | Institut Pasteur CIBU-ERI | Ecole nationale vétérinaire d’Alfort-laboratoire de santé animale Anses UMR 1161 de virologie ENVA-Anses-INRAE | isolate from cat |
| EPI_ISL_699509 | Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories | Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories | isolate from cat |
| EPI_ISL_699507 | Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories | Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories | isolate from cat |
| EPI_ISL_699506 | Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories | Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories | isolate from cat |
| EPI_ISL_482820 | IrsiCaixa AIDS Research Lab | Centre de Recerca en Sanitat Animal (IRTA-CReSA) | isolate from cat |
| EPI_ISL_483063 | Virology, Ecole Nationale Veterinaire de Toulouse | unknown | isolate from cat |
| EPI_ISL_483064 | Virology, Ecole Nationale Veterinaire de Toulouse | unknown | isolate from cat |
| EPI_ISL_854043 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854044 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854047 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854048 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854056 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854062 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854064 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854081 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854082 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854087 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_854108 | Bergthaler laboratory, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences | Austrian Agency for Health and Food Safety (AGES) | phylogeny |
| EPI_ISL_603551 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603729 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603513 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_737750 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_857526 | Swiss National Reference Centre for Influenza | Swiss National Reference Centre for Influenza | phylogeny |
| EPI_ISL_830757 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830752 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830762 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_603459 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603460 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_830872 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830879 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830881 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830882 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830884 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830888 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830891 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830901 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830903 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830906 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830907 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830914 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830992 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830993 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830925 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830928 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830929 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830998 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830959 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830965 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_830972 | University Hospital Basel, Clinical Bacteriology | University Hospital Basel, Clinical Virology | phylogeny |
| EPI_ISL_614899 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_614901 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_614902 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_614904 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_614906 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_721846 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_721853 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_768144 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_693893 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_693894 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_693936 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_796492 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_737782 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_899802 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_721921 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603423 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603490 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603499 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603509 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_603514 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_614967 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_614971 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_614974 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_693792 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_693838 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_729237 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_729214 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_693948 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_721950 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_729029 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_728979 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_729071 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_729074 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_729078 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_729084 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_737401 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_737919 | Department of Biosystems Science and Engineering, ETH Zurich | Viollier AG | phylogeny |
| EPI_ISL_402125 | National Institute for Communicable Disease Control and Prevention (ICDC) Chinese Center for Disease Control and Prevention (China CDC) | National Institute for Communicable Disease Control and Prevention (ICDC) Chinese Center for Disease Control and Prevention (China CDC) | phylogeny |