Table 6. . Significant probes common between diagnosed and presymptomatic dementia groups.
Probe | Probe | Location | Timepoint | Status | Mean (%) | Δ Case versus controls | p-value |
---|---|---|---|---|---|---|---|
APP | cg08542030 | chr21:27306498 | Baseline | Control | 76.66% | 1.41% | 0.02 |
Presymptomatic | 78.07% | ||||||
Follow-up | Control | 75.36% | 2.39% | 0.01 | |||
Dementia | 77.75% | ||||||
cg17728373 | chr21:27404776 | Baseline | Control | 58.34% | 2.16% | 0.03 | |
Presymptomatic | 60.51% | ||||||
Follow-up | Control | 57.07% | 3.86% | 0.01 | |||
Dementia | 60.92% | ||||||
cg22552084 | chr21:27497496 | Baseline | Control | 61.80% | 1.90% | 0.03 | |
Presymptomatic | 63.69% | ||||||
Follow-up | Control | 61.16% | 2.68% | 0.03 | |||
Dementia | 63.84% | ||||||
cg03015479 | chr21:27544797 | Baseline | Control | 68.09% | 1.82% | 0.04 | |
Presymptomatic | 69.91% | ||||||
Follow-up | Control | 66.64% | 3.32% | 0.007 | |||
Dementia | 69.96% | ||||||
BDNF | cg26949694 | chr11:27742060 | Baseline | Control | 17.86% | -1.05% | 0.03 |
Presymptomatic | 16.82% | ||||||
Follow-up | Control | 19.00% | -2.30% | 0.03 | |||
Dementia | 16.69% | ||||||
cg01225698 | chr11:27742355 | Baseline | Control | 11.70% | -1.05% | 0.02 | |
Presymptomatic | 10.66% | ||||||
Follow-up | Control | 12.29% | -1.83% | 0.02 | |||
Dementia | 10.47% | ||||||
cg27351358 | chr11:27743258 | Baseline | Control | 8.13% | -0.92% | 0.02 | |
Presymptomatic | 7.21% | ||||||
Follow-up | Control | 8.33% | -1.39% | 0.01 | |||
Dementia | 6.94% | ||||||
SNCA | cg06176111 | chr4:90674837 | Baseline | Control | 62.15% | 1.57% | 0.05 |
Presymptomatic | 63.72% | ||||||
Follow-up | Control | 61.87% | 2.48% | 0.04 | |||
Dementia | 64.34% | ||||||
cg17045024 | chr4:90758207 | Baseline | Control | 18.89% | -1.89% | 0.04 | |
Presymptomatic | 17.00% | ||||||
Follow-up | Control | 19.72% | -3.36% | 0.03 | |||
Dementia | 16.36% | ||||||
cg00119181 | chr4:90758537 | Baseline | Control | 8.40% | -1.20% | 0.05 | |
Presymptomatic | 7.21% | ||||||
Follow-up | Control | 9.53% | -2.34% | 0.02 | |||
Dementia | 7.20% |