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[Preprint]. 2021 Mar 22:2021.03.19.21253964. [Version 2] doi: 10.1101/2021.03.19.21253964

Longitudinal assessment of diagnostic test performance over the course of acute SARS-CoV-2 infection

Rebecca L Smith, Laura L Gibson, Pamela P Martinez, Ruian Ke, Agha Mirza, Madison Conte, Nicholas Gallagher, Abigail Conte, Leyi Wang, Rick Fredrickson, Darci C Edmonson, Melinda E Baughman, Karen K Chiu, Hannah Choi, Tor W Jensen, Kevin R Scardina, Shannon Bradley, Stacy L Gloss, Crystal Reinhart, Jagadeesh Yedetore, Alyssa N Owens, John Broach, Bruce Barton, Peter Lazar, Darcy Henness, Todd Young, Alastair Dunnett, Matthew L Robinson, Heba H Mostafa, Andrew Pekosz, Yukari C Manabe, William J Heetderks, David D McManus, Christopher B Brooke
PMCID: PMC8010751  PMID: 33791719

SUMMARY

What is already known about this topic?

Diagnostic tests and sample types for SARS-CoV-2 vary in sensitivity across the infection period.

What is added by this report?

We show that both RTqPCR (from nasal swab and saliva) and the Quidel SARS Sofia FIA rapid antigen tests peak in sensitivity during the period in which live virus can be detected in nasal swabs, but that the sensitivity of RTqPCR tests rises more rapidly in the pre-infectious period. We also use empirical data to estimate the sensitivities of RTqPCR and antigen tests as a function of testing frequency.

What are the implications for public health practice?

RTqPCR tests will be more effective than rapid antigen tests at identifying infected individuals prior to or early during the infectious period and thus for minimizing forward transmission (provided results reporting is timely). All modalities, including rapid antigen tests, showed >94% sensitivity to detect infection if used at least twice per week. Regular surveillance/screening using rapid antigen tests 2-3 times per week can be an effective strategy to achieve high sensitivity (>95%) for identifying infected individuals.

Full Text Availability

The license terms selected by the author(s) for this preprint version do not permit archiving in PMC. The full text is available from the preprint server.


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