Abstract
Aging‐related tau astrogliopathy (ARTAG) is defined by the presence of two types of tau‐bearing astrocytes: thorn‐shaped astrocytes (TSAs) and granular/fuzzy astrocytes in the brain of old‐aged individuals. The present study is focused on TSAs in rare forms of ARTAG with no neuronal tau pathology or restricted to entorhinal and transentorhinal cortices, to avoid bias from associated tauopathies. TSAs show 4Rtau phosphorylation at several specific sites and abnormal tau conformation, but they lack ubiquitin and they are not immunostained with tau‐C3 antibodies which recognize truncated tau at Asp421. Astrocytes in ARTAG have atrophic processes, reduced glial fibrillary acidic protein (GFAP) and increased superoxide dismutase 2 (SOD2) immunoreactivity. Gel electrophoresis and western blotting of sarkosyl‐insoluble fractions reveal a pattern of phospho‐tau in ARTAG characterized by two bands of 68 and 64 kDa, and several middle bands between 35 and 50 kDa which differ from what is seen in AD. Phosphoproteomics of dissected vulnerable regions identifies an increase of phosphorylation marks in a large number of proteins in ARTAG compared with controls. GFAP, aquaporin 4, several serine‐threonine kinases, microtubule associated proteins and other neuronal proteins are among the differentially phosphorylated proteins in ARTAG thus suggesting a hyper‐phosphorylation background that affects several molecules, including many kinases and proteins from several cell compartments and various cell types. Finally, present results show for the first time that tau seeding is produced in neurons of the hippocampal complex, astrocytes, oligodendroglia and along fibers of the corpus callosum, fimbria and fornix following inoculation into the hippocampus of wild type mice of sarkosyl‐insoluble fractions enriched in hyper‐phosphorylated tau from selected ARTAG cases. These findings show astrocytes as crucial players of tau seeding in tauopathies.
Keywords: ARTAG, thorn‐shaped astrocytes, kinases, tau, seeding, phosphorylation
Introduction
Aging‐related tau astrogliopathy (ARTAG) is defined by the presence of two types of tau‐bearing astrocytes: thorn‐shaped astrocytes (TSAs) and granular/fuzzy astrocytes (GFAs) in the brain of old‐aged individuals 28. TSAs are a variety of fibrillar astrocyte characterized by a thorn‐like appearance, located in the subependymal and subpial regions, perivascular spaces and in clusters in the frontal and temporal cortices, basal forebrain and brain stem 16, 21, 22, 23, 30, 36, 37, 40, 49, 54. TSAs were first described in association with Alzheimer's disease (AD) and argyrophilic grain disease (AGD) but they are also common in other tauopathies in the elderly 29, 31. GFAs are mainly located in the grey matter; firstly identified in a particular subgroup of patients with dementia in the elderly 30, they are also present in combination with other tauopathies in the elderly 14.
TSAs in advanced stages of AD show tau phosphorylation at several specific sites and abnormal tau conformation, but they lack ubiquitin and are not immunostained with tau‐C3 antibodies which recognize truncated tau at Asp421 37. Gel electrophoresis and western blotting to phospho‐tau of sarkosyl‐insoluble fractions from TSAs‐containing white matter showed a pattern of two bands of 68 and 64 kDa typical of 4R‐taupathies in contrast with the phospho‐tau band pattern of AD characterized by three bands of 68, 64 and 60 kDa, and a lower band of truncated tau of about 20 kDa obtained from the neurofibrillary tangle (NFT)‐rich dissected hippocampus of the same cases 37. Therefore, TSAs in AD are 4Rtau astrocytes with immunohistochemical properties of pre‐tangles 14.
Pioneering studies have demonstrated seeding and spreading of abnormal tau derived from brain homogenates of AD and other tauopathies inoculated into the brain of transgenic mice over‐expressing human tau or mutated tau under the rationale that this background facilitates tau seeding and propagation 4, 7, 34. The characteristics of seeding differ depending on the type of tauopathy, thus suggesting that several types of tau species have particular properties 8, 41. Recent studies have shown seeding of human tau from homogenates of AD and tauopathy cases inoculated into the brain of wild‐type mice, thereby indicating that a potentiating background is not mandatory to trigger this process 19, 41. All these experiments were performed using brain samples with tau pathology only in neurons, or in neurons and glial cells. None of these studies enabled the examination of glial tau as the source of abnormal tau seeding. This is an important aspect because neurodegenerative diseases are not restricted to neurons but rather involve neurons and glial cells 12, 44, 45, 58.
The present study is designed to delve further into the characteristics of tau deposition, and the properties and environment of TSAs in ARTAG cases with maximal tau deposition limited to the entorhinal and transentorhinal cortex (Braak and Braak stages I–II of NFT pathology) to avoid bias linked to associated tauopathies. The study is focused on four main aspects: (i) biochemical characteristics of tau, (ii) properties of TSAs, (iii) assessment of the phosphoproteome and identification of phosphorylated proteins in TSA‐enriched temporal white matter to characterize the biochemical environment in which TSAs develop and (iv) capacity of tau seeding of sarkosyl‐insoluble fractions from ARTAG cases inoculated into the hippocampus of wild‐type mice, and identification of cell targets of tau seeding.
Material and Methods
Brain samples
Brain tissue was obtained from the Institute of Neuropathology HUB‐ICO‐IDIBELL Biobank following the guidelines of Spanish legislation on this matter (Real Decreto de Biobancos 1716/2011) and approval of the local ethics committee. One hemisphere was immediately cut in coronal sections, 1‐cm thick, and selected areas of the encephalon were rapidly dissected, frozen on metal plates over dry ice, placed in individual air‐tight plastic bags and stored at −80°C until use for biochemical studies. The other hemisphere was fixed by immersion in 4% buffered formalin for 3 weeks for morphological studies; sections from 20 representative brain regions were stained with hematoxylin and eosin, periodic acid‐Schiff (PAS) and Klüver–Barrera, or processed for immunohistochemistry for microglia Iba1, GFAP, β‐amyloid, Aβ40, Aβ42, phospho‐tau AT8, α‐synuclein, TDP‐43, ubiquitin, p62C and p62N, using EnVision+ System peroxidase (Dako), and diaminobenzidine and H2O2. Details of the antibodies are shown in Table 1.
Table 1.
Antibodies used, origins, dilutions, and suppliers.
| Antibody | Mono‐/polyclonal | Dilution | Supplier | Country |
|---|---|---|---|---|
| β‐Amyloid | Monoclonal | 1:50 | Dako | Glostrup, DK |
| Aβ‐40 | Rabbit polyclonal | 1:100 | Merck‐Millipore | Billerica, MA, USA |
| Aβ‐42 | Rabbit polyclonal | 1:50 | Merck‐Millipore | Billerica, MA, USA |
| α‐Synuclein | Rabbit polyclonal | 1:500 | Chemicon, Merck‐Millipore | Billerica, MA, USA |
| TDP‐43 | Rabbit polyclonal | 1:200 | Abcam | Cambridge, UK |
| p62C | Guinea pig polyclonal | 1:100 | Progen, RA Biopharm | Darmstadt, GE |
| p62N | Guinea pig polyclonal | 1:100 | Progen, RA Biopharm | Darmstadt, GE |
| Iba1 | Rabbit polyclonal | 1:1000 | Wako | Richmond, VA, USA |
| 4Rtau | Monoclonal | 1:50 | Merck‐Millipore | Billerica, MA,USA |
| 3Rtau | Monoclonal | 1:800 | Merck‐Millipore | Billerica, MA, USA |
| Phospho‐tau Thr181 | Rabbit polyclonal | 1:50 | Cell Signaling | Danvers, MA,USA |
| Phospho‐tau Ser199 | Rabbit polyclonal | 1:50 | Calbiochem | Darmstadt, GE |
| Phospho tau Thr231 | Rabbit polyclonal | 1:50 | Calbiochem | Darmstadt, GE |
| Phospho‐tau Ser262 | Rabbit polyclonal | 1:50 | Calbiochem | Darmstadt, GE |
| Phospho‐tau Ser422 | Rabbit polyclonal | 1:50 | Calbiochem | Darmstadt, GE |
| AT8 (Ser202/Thr205) | Monoclonal | 1:50 | Innogenetics | Ghent, BE |
| Tau‐100 (Thr212/Ser214) | Monoclonal | 1:100 | Thermo Scientific | Waltham, MA, USA |
| PHF1(Ser396/Ser404) | Monoclonal | 1:500 | Dr. Peter Davies | New York, USA |
| Alz50 (aa 5–15) | Monoclonal | 1:20 | Dr. Peter Davies | New York, USA |
| MC‐1 (aa312–322) | Monoclonal | 1:50 | Dr. Peter Davies | USA |
| tau‐C3 (tr Asp421) | Monoclonal | 1:300 | Abcam | Cambridge, UK |
| Ab 499 (aa 14–26) | Monoclonal | 1:20 | Dr. Jose Luna | CDMX, Mexico DF |
| Ab 229 (aa 229–233) | Rabbit polyclonal | 1:100 | Dr. Jose Luna | CDMX, Mexico DF |
| Ab 394 (aa 394–398) | Rabbit polyclonal | 1:100 | Dr. Jose Luna | CDMX, Mexico DF |
| Ubiquitin | Rabbit polyclonal | 1:200 | Dako | Glostrup, DK |
| Glial fibrillary acidic protein (GFAP) | Rabbit polyclonal | 1:500 | Dako | Glostrup, DK |
| SOD2 | Rabbit polyclonal | 1:100 | Stressgen | San Diego, CA, USA |
| AQP4 | Monoclonal | 1:400 | Sigma | St Louis, Missouri, USA |
| GLT‐1 | Guinea pig | 1:100 | Merck‐Millipore | Billerica, MA,USA |
| P‐GFAP Ser8 | Rabbit polyclonal | 1:500 | Abcam | Cambridge, UK |
| P‐tuberin Ser939 | Rabbit polyclonal | 1:100 | Cell Signaling | Danvers, MA,USA |
| P‐PKA α‐β Thr197 | Rabbit polyclonal | 1:100 | Invitrogen | Carlsbad, CA, USA |
| P38‐P Thr180‐Tyr182 | Rabbit polyclonal | 1:100 | Cell Signaling | Danvers, MA, USA |
| Vimentin | Rabbit polyclonal | 1:400 | Abcam | Cambridge, UK |
| YKL‐40 | Rabbit polyclonal | 1:200 | Invitrogen | Carlsbad, CA, USA |
| Olig‐2 | Rabbit polyclonal | 1:500 | Abcam | Cambridge, UK |
| NeuN | Mouse monoclonal | 1:100 | Merck‐Millipore | Billerica, MA,USA |
NFT stages were categorized according to Braak and Braak modified for paraffin sections 5, 6. Since the present series of ARTAG was restricted to cases with no neuronal pathology or with NFTs and pre‐tangles limited to the entorhinal and entorhinal cortex without β‐amyloid deposition, the possibility that some cases had associated primary age‐related tauopathy (PART) 9 cannot be excluded. Staging of argyrophilic grain disease (AGD) was established as reported elsewhere 16. Chronic traumatic encephalopathy 35 was not recorded in any case.
Control cases had not suffered from neurologic or psychiatric diseases, infections of the nervous system, brain neoplasms or systemic and central immune diseases, and did not have abnormalities in the neuropathological examination. Cases with associated pathologies such as vascular diseases (excepting mild atherosclerosis and arteriolosclerosis), TDP‐43 proteinopathy, metabolic syndrome and hypoxia were excluded from the present study.
ARTAG cases were six men and two women aged 77 ± 8.6 years. ARTAG lesions were categorized as detailed elsewhere 31, 32. Semi‐quantitative assessment of optical microscopy sections was performed separately by at least two people. The abundance of TSAs, as revealed in AT8‐immunostained sections, was categorized as: ++ for large and + for small numbers of positive cells/inclusions, and – for no immunoreactivity. The characteristics of cases and the distribution of lesions in each case are summarized in Table 2.
Table 2.
Cases and distribution of lesions in the present series of pure ARTAG. TSAs = thorn‐shaped astrocytes; subepend = subependymal; subpial = subpial; WM T = clusters in the temporal white matter; WM F = clusters in the frontal white matter; perivasc = perivascular; bas foreb = basal forebrain; caudate = caudate nucleus; med obl = medulla oblongata; PART = Primary age‐related tauopathy (Braak and Braak staging of NFT pathology); LBD = Lewy body disease; AGD = argyrophilic grain disease.
| TSAs | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Age | Gender | Pm delay | Subepend | Subpial | WM T | WM F | Perivasc | Bas foreb | Caudate | Amygdala | Med obl | Other |
| 1 | 66 | M | 8 | + | + | + | − | + | + | − | + | − | PART0 |
| 2 | 78 | F | 4 | ++ | + | ++ | + | + | + | + | ++ | ++ | PARTI |
| 3 | 87 | F | 18 | ++ | ++ | ++ | + | ++ | ++ | + | + | ++ | PARTI |
| 4 | 68 | M | 12 | + | ++ | ++ | + | + | + | + | + | − | PART I |
| 5 | 75 | M | 5 h 30 m | ++ | ++ | ++ | ++ | + | ++ | + | ++ | + | PARTII |
| 6 | 86 | M | 16 | ++ | ++ | ++ | + | + | + | − | + | − | PARTI |
| 7 | 70 | M | 17 | ++ | + | ++ | + | ++ | + | + | + | − | LBD3 |
| 8 | 86 | M | 12 | ++ | ++ | ++ | + | ++ | ++ | + | + | + | AGDI |
Control cases were four men and four women aged 66.3 ± 5.5 years. In addition, the frontal cortex of two AD cases stages V–VI/C (one man aged 74 and one woman aged 78) was used in the study of phospho‐tau band patterns from sarkosyl‐insoluble fractions. The cause of death in ARTAG and control cases was variable and included bronchopneumonia, respiratory failure, cardiac arrest, kidney failure, pulmonary thromboembolism and metastatic carcinoma. Post‐mortem delay between death and tissue processing was between 4 and 18 h in ARTAG and control cases.
All cases were used for immunohistochemistry, immunofluorescence and confocal microscopy, and RT‐qPC. Cases 3 (medulla oblongata, basal forebrain), 5 and 7 (basal forebrain and caudate) were used for the extraction of sarkosyl‐insoluble fractions and western blotting studies of tau. Cases 2 (medulla oblongata), 3 and 6 (temporal white matter) were used for phosphoproteomics.
Sarkosyl‐insoluble fractions used for inoculation were obtained from the medulla oblongata and basal forebrain of an 87‐year‐old women with PARTI (case 3); and from the basal forebrain and caudate of two men aged 75 and 70 years with neuropathological diagnoses of PART2 and Lewy body disease stage 3, respectively (cases 5 and 7) (Table 2).
Importantly, all the samples used for inoculation studies were first checked for morphological changes in cryostat sections stained with anti‐tau antibodies. Although the preservation of the material was suboptimal due to freezing, it was suitable to verify the presence of large numbers of TSAs and the lack of tau pathology in other cell types including neurons (as expected from the screening and selection of cases in the present series) and oligodendrocytes.
Control and ARTAG cases were processed in parallel in all assessments.
Immunohistochemistry
De‐waxed sections, 4 µ thick, were processed for immunohistochemistry. The sections were boiled in citrate buffer (20 min) to retrieve tau antigenicity. Endogenous peroxidases were blocked by incubation in 10% methanol–1% H2O2 solution (15 min) followed by 3% normal horse serum solution. Then the sections were incubated at 4°C overnight with one of the primary antibodies against 4Rtau, 3Rtau, amino acids 14–26 (antibody 499), amino acids 229–233 (antibody 229), amino acids 394–398, specific phospho‐tau Thr181, Ser199, Thr231, Ser262 and Ser422, double‐phosphorylation sites Ser202‐Thr205 (clone AT8), Ser396–404 (PHF1) and Thr212‐Ser214 (tau‐100), conformational tau modifications at amino acids 5–15 (Alz50) and amino acids 312–322 (MC‐1) and tau truncated at aspartic acid 421 (tau‐C3). Other sections were incubated with one of the following antibodies against glial fibrillary acidic protein (GFAP): P‐GFAP Ser8, phosphorylated tuberin (P‐tuberin Ser939), superoxide dismutase 2 (SOD2), aquaporine 4 (AQP4), phosphorylated p38 (p38‐P Thr180‐Tyr182), phosphorylated protein kinase A α/β (PKA‐P α/β Thr197), glutamate transporter solute carrier family 1, member 2 (GLT‐1/EAAT2), vimentin and YKL‐40. The characteristics of the antibodies, dilutions and suppliers are listed in Table 1.
Following incubation with the primary antibody, the sections were incubated with EnVision + system peroxidase (Dako, DK) for 30 min at room temperature. The peroxidase reaction was visualized with diaminobenzidine and H2O2. Control of the immunostaining included omission of the primary antibody; no signal was obtained following incubation with only the secondary antibody.
Double‐labeling immunofluorescence and confocal microscopy in human cases
De‐waxed sections, 4 µ thick, were stained with a saturated solution of Sudan black B (Merck, DE) for 15 min to block autofluorescence of lipofuscin granules present in cell bodies, and then rinsed in 70% ethanol and washed in distilled water. The sections were boiled in citrate buffer to enhance antigenicity and blocked for 30 min at room temperature with 10% fetal bovine serum diluted in PBS. Then, the sections were incubated at 4°C overnight with combinations of primary antibodies against phospho‐tau Thr181, and antibodies 499 and 394; P‐GFAP Ser8 and phospho‐tau Thr181; and AT8 and SOD2, vimentin, YKL‐40, P‐tuberin, GLT‐1, AQP4, p38‐P Thr180‐Tyr182 and P‐PKA α/β Thr197.
The characteristics of the antibodies, dilutions and suppliers are listed in Table 1.
After washing, the sections were incubated with Alexa488 or Alexa546 (1:400, Molecular Probes, The United States) fluorescence secondary antibodies against the corresponding host species. Nuclei were stained with DRAQ5TM (1:2000, Biostatus, GB). After washing, the sections were mounted in Immuno‐Fluore mounting medium (ICN Biomedicals, The United States), sealed and dried overnight. Sections were examined with a Leica TCS‐SL confocal microscope.
Image acquiring and analysis
Confocal images were acquired using a microscope Leica DMIRE2 and Leica confocal software. Quantification of GFAP positive cell area and size was performed using Fiji ImageJ software in three different sections containing between 25 and 100 cells per image.
Statistical analysis
Statistical analysis was performed using GraphPad Prismv5 software. Differences between groups were analyzed by one‐way ANOVA followed by the appropriate post‐hoc test.
Normalization of antibody‐based protein detection
Series of cases were processed in parallel to equalize the conditions of staining of a particular antibody in sections from different entities, and a given antibody was used in different series to minimize day‐to‐day variations. The estimation of co‐localization of two proteins labeled with specific antibodies and examined with the confocal microscope was assessed by counting the number of cells expressing both antigens in relation to the number of cells stained with each one of the antibodies in five selected fields per section at a magnification of 600× in every case. In most instances, the values were expressed as the percentage of the more abundant protein because the less abundant protein represented a subset of the former.
Western blotting of sarkosyl‐insoluble fractions
Frozen samples of about 1g were lysed in 10 volumes (w/v) with cold suspension buffer (10 mM Tris‐HCl, pH 7.4, 0.8 M NaCl, 1 mM EGTA) supplemented with 10% sucrose, protease, and phosphatase inhibitors (Roche, GE). The homogenates were first centrifuged at 20 000 × g for 20 min (Ultracentrifuge Beckman with 70Ti rotor) and the supernatant (S1) was saved. The pellet was re‐homogenized in 5 volumes of homogenization buffer and re‐centrifuged at 20 000 × g for 20 min (Ultracentrifuge Beckman with 70Ti rotor). The two supernatants (S1 + S2) were then mixed and incubated with 0.1% N‐lauroylsarkosynate (sarkosyl) for 1 h at room temperature while being shaken. Samples were then centrifuged at 100 000 × g for 1 h (Ultracentrifuge Beckman with 70Ti rotor). Sarkosyl‐insoluble pellets (P3) were re‐suspended (0.2 mL/g) in 50 mM Tris–HCl (pH 7.4). Protein concentrations were quantified with the bicinchoninic acid assay (BCA) assay (Pierce, Waltham, MA). Samples were mixed with loading sample buffer and heated at 95°C for 5 min. About 60 µg of protein was separated by electrophoresis in SDS‐PAGE gels and transferred to nitrocellulose membranes (200 mA per membrane, 90 min). The membranes were blocked for 1 h at room temperature with 5% non‐fat milk in TBS containing 0.2% Tween and were then incubated with one of the primary antibodies: anti‐tau Ser422 [diluted 1:1000; Thermo Fisher (Waltham, MA, USA), or anti‐4Rtau (diluted 1:1,000; Millipore)]. After washing with TBS‐T, blots were incubated with the appropriate secondary antibody (anti‐mouse/anti‐rabbit IgG conjugated with horseradish peroxidase diluted at 1:2000, DAKO, DE) for 45 min at room temperature. Immune complexes were revealed by incubating the membranes with chemiluminescence reagent (Amersham, GE Healthcare, Buckinghamshire, The United Kingdom).
Phosphoproteomics
Sample preparation, phosphopeptide enrichment and LC‐MSMS analysis
Three control and three ARTAG fresh brain samples were processed for protein extraction in 7 M urea, 2 M thiourea and 2% SDS. After that, samples were quantified using the BCA method and 350 μg of every sample condition was digested using a FASP (Filter‐Aided Sample Preparation) approach. Briefly, proteins were reduced with dithiothreitol 10 mM (60 min, 32°C) and alkylated with iodoacetamide 20 mM (30 min at 25°C in the dark). Then, the samples were loaded onto an Amicon Ultra (filter 10 kDa, 0.5 mL, Millipore, Billerica, MA) device to remove interfering agents with 2 rounds of centrifugations/washes with 100 mM ammonium bicarbonate buffer (13 600 × g; 25 min at room temperature). Digestion was carried out in two steps: first, samples were digested (1:50w sample/w enzyme) with Lys‐C (Wako, Richmond, VA) in 6 M urea buffer for 3 h at 35°C, second, the samples were diluted 10‐fold with 100 mM ammonium bicarbonate buffer and digested with modified porcine trypsin (Promega‐Gold, Madison, WI) (1/25w sample/w enzyme) for 16 h at 37°C. The resulting peptide mixture was recovered by centrifuging the filter. Then, the filter was washed twice with 300 μL of 50 mM ammonium bicarbonate and once with 200 μL of 20% acetonitrile/50 mM ammonium bicarbonate (13 600 × g for 25 min at room temperature). All the fractions were pooled, and the final peptide mixture was acidified with formic acid. Finally, the final volume of the acidified peptide solution was reduced on a SpeedVac vacuum system (Thermo Fisher Scientific, Barcelona, Spain), and the peptide solution was desalinated with a C18 spin column (Thermo Fisher Scientific) following the indications of the supplier. An aliquot of 200 μg was separated and further processed for phosphopeptide enrichment.
Phosphopeptide enrichment was carried out with titanium dioxide (TiO2) magnetic beads following the specifications of the supplier (High‐Select™ TiO2 Phosphopeptide Enrichment Kit, Thermo Fisher Scientific). Briefly, peptides were re‐suspended by vortexing in 150 μL of binding/equilibration buffer at pH less than 3. Then, the phosphopeptides were enriched with the TiO2 beads and finally dried in a SpeedVacunder vacuum.
Samples were analyzed in a Proxeon 1000 liquid chromatographer coupled to an Orbitrap Fusion Lumos (Thermo Fisher Scientific) mass spectrometer. Samples were re‐suspended in 0.5% formic acid in water, and 4.5 μL were injected for LC‐MSMS analysis. Peptides were trapped on an NTCC‐360/75‐3‐123 LC column and separated using a C18 reverse phase LC column‐Easy Spray (Thermo Fisher Scientific). The gradient used for the elution of the peptides was 1%–35% in 90 min followed by a gradient from 35% to 85% in 10 min with 250 nL/min flow rate. Eluted peptides were subjected to electrospray ionization in an emitter needle (PicoTipTM, New Objective, Scientific Instrument Services, Ringoes, NJ) with an applied voltage of 2000 V. Peptide masses (m/z 300–1700) were analyzed in data‐dependent mode where a full scan MS was acquired on the Orbitrap with a resolution of 60 000 FWHM at 400 m/z. Up to the 10 most abundant peptides (minimum intensity of 500 counts) were selected from each MS scan and then fragmented using collision‐induced dissociation (CID) in the linear ion trap using helium as collision gas with 38% normalized collision energy. Multistage activation was enabled to favor the detection of phosphopeptides. The scan time settings were: full MS at 250 ms and MSn at 120 ms. Generated .raw data files were collected with Thermo Xcalibur (v.2.2) (Termo Fisher Scientific).
Database search
Thermo Proteome Discoverer (v. 2.0.0.802) was used to search the raw data obtained in the MS analyses against a SwissProt/Uniprothuman database with the MASCOT search engine (v2.5). A target and decoy database was used in combination with the Percolator algorithm to assess the false discovery rate (FDR). The PhosphoRS node was used to provide a confidence measure for the localization of phosphorylation in the peptide sequences identified with this modification.
Phosphopeptides analysis
Before proceeding to the statistical analysis data were pre‐processed in four sequential steps: (i) the phosphopeptide list was filtered in order to remove potential contaminants (ie, residual peptides bound to the chromatographic column such as bovine serum proteins); (ii) phosphopeptides with the identical amino acid sequence as well as phosphosites were merged into a single phosphopeptide (ie, methionine‐oxidized and non‐methionine oxidized phosphopeptides); (iii) the information on the multi‐phosphorylated peptides was split so that each phosphosite appears in a single row and (iv) the final list of phosphosites was filtered to retain only the sites with a probability site value (pRS) greater than 75% (0.75). After that, missing not at random areas (MNAR) were imputed using the minimal area value detected in every run by the mass spectrometer. Missing values were considered MNAR when three valid values appear in one experimental condition and only one or no valid values appear in the other condition.
Before the imputation step, the quantification values for every sample were log2‐normalized against the corresponding median. In order to avoid potential bias introduced by the phosphopeptide enrichment, this value is calculated, for every sample, using the intensity values of the total peptides. Finally, a two‐sided t‐test was performed for every phosphosite and the P‐value adjusted by False Discovery Rate using the Benjamini–Hochberg procedure.
Phosphomotif enrichment analysis
The enrichment of potential phosphorylation motifs was performed using the motif‐X web tool (http://motif-x.med.harvard.edu/) 50. Previous to the analysis, the phosphosites of interest were centered, using the canonical sequence for every protein in the human uniprot database, so that a final 15‐mer was obtained for every phosphosite. The list of 15‐mers was analyzed at motif‐x. The searching parameters used were “centered,” “foreground format” and “width” or number of total characters in the motif (in our samples, “width” = 15). The rest of the parameters were set by default.
RNA purification, retrotranscription reaction and RT‐qPCR for detection of 3R and 4R tau isoforms
Purification of RNA from the temporal white matter in control, AD and ARTAG cases was carried out using RNeasy Lipid Tissue Mini Kit (Qiagen, Hilden, Germany) following the protocol provided by the manufacturer combined with DNase digestion to avoid extraction and later amplification of genomic DNA. The concentration of each sample was obtained from A260 measurements with NanoDrop 2000 spectrophotometer (Thermo Scientific, Waltham, MA). RNA integrity was tested using the Agilent 2100 BioAnalyzer (Agilent, Santa Clara, CA). Retrotranscription reaction of RNA samples was carried out with the High‐Capacity cDNA Archive kit (Applied Biosystems, Foster City, CA) following the guidelines provided by the supplier, and using Gene Amp® 9700 PCR System thermocycler (Applied Biosystems). A parallel reaction for one RNA sample was processed in the absence of reverse transcriptase to rule out DNA contamination. Tau mRNA isoforms were assessed by using SYBR green quantitative RT‐PCR; 1000 ng of total RNA was used as a template. cDNA samples obtained from the retrotranscription reaction were diluted 1:20 and duplicate SYBR green PCR assays for each gene were performed. For each reaction, 2.5 µL of cDNA was mixed with 1.25 µL of forward primer 10 μM, 1.25 µL reverse primer 10 μM and 5 µL of PowerUp™ SYBR® Green Master Mix (Applied Biosystems). The reactions were performed following the parameters: 50°C for 2 min, 95°C for 10 min and 40 cycles at 95°C for 15 s and at 60°C for 1 min. SYBR green PCR data were captured using the Sequence Detection Software (SDS version 2.2, Applied Biosystems). Forward and reverse primer sequences for quantitative PCR were 3Rtau forward: GTCCGTACTCCACCCAAGTC; 3Rtau reverse: GTTTGTAGACTATTTGCACCTTC; 4Rtau forward: GGCGGGAAGATGCAGATAATTAAT; 4Rtau reverse: GTAGACTATTTGCACACTGCC. Parallel assays for each sample were carried out using primers for β‐glucuronidase (GUS‐β) forward: GTCTGCGGCATTTTGTCGG, reverse: CACACGATGGCATAGGAATGG; X‐prolyl aminopeptidase P1 (XPNPEP1) forward: CTCATTCCTGTCAAGGAGAACC, reverse: ACCACATGACGTTCCTCTCAG; and glyceraldehyde‐3‐phosphate dehydrogenase (GADPH) forward: CGCTCTCTGCTCCTCCTGTT and reverse: CCATGGTGTCTGAGCGATGT; as endogenous controls. For the data analysis, threshold cycle (CT) values for each sample were processed to obtain the double delta CT (ΔΔCT) values. First, delta CT (ΔCT) values were calculated as the normalized CT values of each target gene in relation to the CT of endogenous controls GUS‐β, XPNPEP1 and GADPH. Then, ΔΔCT values were obtained from the ΔCT of each sample minus the mean ΔCT of the population of control samples. The fold change was calculated using the equation 2^(−ΔΔCT). Mean fold‐change values of each experimental group were analyzed by One Way ANOVA test with post‐hoc Tukey by using GraphPad Prism version 5.01 (La Jolla, CA) and Statgraphics Statistical Analysis and Data Visualization Software version.1 (Warrenton, VA).
Animals and tissue processing
All animal procedures were carried out following the guidelines of the European Communities Council Directive 2010/63/EU and with the approval of the local ethical committee (University of Barcelona, Spain).
Wild‐type C57BL/6 mice were injected into the hippocampus at the coordinates AP: −1.9, ML: ± 1.4 and DV: −1.5 for 10 min, followed by a waiting time of 5 min and removal of the needle 10 min later; or into the lateral ventricle at the coordinates AP: −0.6, ML: ± 1.2 and DV: −2.2 for 15 min, followed by a waiting time of 4 min and removal of the needle 15 min later. The quantity injected was 0.8 μL in every case. Each mouse was injected with inoculum from a single ARTAG (or AD) case. Animals were killed under anesthesia at the desired time‐periods and the brains were rapidly fixed with paraformaldehyde in phosphate buffer and embedded in paraffin. Consecutive serial sections 4‐μm thick were obtained with a sliding microtome; sections were stained with hematoxylin and eosin or processed for immunohistochemistry using the antibody AT8), 4Rtau and 3Rtau. Following incubation with the primary antibody, the sections were incubated with EnVision + system peroxidase for 30 min at room temperature. The peroxidase reaction was visualized with diaminobenzidine and H2O2. Control of the immunostaining included omission of the primary antibody; no signal was obtained following incubation with only the secondary antibody.
Double‐labeling immunofluorescence was carried out on de‐waxed sections, 4‐μm thick, which were stained with a saturated solution of Sudan black B (Merck, DE) for 15 min to block autofluorescence of lipofuscin granules present in cell bodies, and then rinsed in 70% ethanol and washed in distilled water. The sections were boiled in citrate buffer to enhance antigenicity and blocked for 30 min at room temperature with 10% fetal bovine serum diluted in PBS. Then, the sections were incubated at 4°C overnight with combinations of AT8 and one of the following primary antibodies: GFAP, Iba‐1, Olig2 and p38‐P Thr180‐Tyr182. Other sections were immunostained with anti‐phospho tauThr181 and anti‐NeuN (see Table 1 for the characteristics of the antibodies). After washing, the sections were incubated with Alexa488 or Alexa546 fluorescence secondary antibodies against the corresponding host species. Nuclei were stained with DRAQ5TM. After washing, the sections were mounted in Immuno‐Fluore mounting medium, sealed, and dried overnight. Sections were examined with a Leica TCS‐SL confocal microscope.
Results
TSAs were recognized using AT8 antibodies and 4Rtau immunoreactivity, but they were negative with anti‐3Rtau antibodies. TSAs were localized in subpial and subependymal regions, perivascular areas, clusters in the temporal and frontal white matter, basal forebrain, caudate, amygdala (including white matter surrounding the amygdala) and medulla oblongata. The distribution of TSAs was subject to individual variations; its characteristics in every case are summarized in Table 2.
In agreement with our previous characterization of TSAs in AD 37, TSAs in the present series were stained with specific tau antibodies against phospho‐Thr181, phospho‐Ser199, phospho‐Thr231, phospho‐Ser262 and phospho‐Ser422, double‐phosphorylation sites phospho‐Ser202‐phospho‐Thr205 (clone AT8) and phospho‐Ser396‐404 (PHF1), conformational tau modifications at amino acids 5–15 (Alz50), and amino acids 312–322 (MC‐1). TSAs were negative with antibodies against tau truncated at aspartic acid 421 (tau‐C3). In addition, TSAs were stained with antibodies 499 (recognizing amino acids 14–26), 229 (amino acids 229–233) and 394 (amino acids 394–398), and with antibody anti‐tau‐100 (phospho‐Thr212/Ser214) (Figure 1A–L). Double‐labeling immunofluorescence and confocal microscopy with antibody 499 and specific tau antibody against phospho‐Thr181, and with antibody 394 and anti‐tau phospho‐Thr181, disclosed 499 and 394 immunoreactivity in all TSAs (Figure 1M,N).
Figure 1.

A–L. Single immunohistochemistry with anti‐tau antibodies directed to N‐terminal, middle and C‐terminal regions of tau. A, D, G, J: subependymal astrocytes; B, E, H, K: subpial astrocytes; C, F, I, L: temporal white matter. A–C: antibody 499 (amino acids 14–26; amino terminal); D–F: antibody 229 (amino acids 229–233, middle region); G–I: antibody 394 (amino acids 394–398, C‐terminal); J–L: antibody tau‐100 (P‐tau Thr212‐Ser214). TSAs are stained with all these antibodies. Paraffin sections slightly counterstained with hematoxylin; A–I, bar in I = 25 μm; J–L, bar in L = 100 μm. M, N. Double‐labeling immunofluorescence and confocal microscopy using (M) antibody 499 (green) and P‐tau Thr181 (red); and (N) antibody 394 (green) and P‐tau Thr181 (red) in the vicinity of a blood vessel (M, asterisk) and in the temporal white matter. N‐terminal and C‐terminal tau segments are co‐expressed with phosphorylated tau. Paraffin sections; nuclei (blue) are stained with DRAQ5TM; M, bar = 75 μm; N, bar = 40 μm.
TSAs, as revealed with GFAP immunohistochemistry, showed small size and reduced numbers of branches in frontal white matter, temporal white matter, subpial region, and subependymal region (Figure 2). This was in contrast not only with astrocytes in control, younger individuals but especially with neighboring reactive GFAP‐immunoreactive astrocytes in the same cases. Double‐labeling immunofluorescence and confocal microscopy confirmed reduced GFAP immunoreactivity in TSAs (Figure 3).
Figure 2.

GFAP‐immunoreactive astrocytes in white matter (A–D) (A) and ARTAG cases in TSAs‐rich regions (B) and neighboring regions without TSAs astrocytes (C). GFAP‐positive astrocytes in ARTAG regions without TSAs have larger branches when compared with controls. However, TSAs have smaller size and reduced number of branches when compared with astrocytes in controls. Paraffin sections; nuclei (blue) are stained with DRAQ5 TM; bar = 50 μm. Particle selection mascara of astrocytes is shown in white matter (D). Quantification of astrocytes areas per μm2 (left lower panels) and astrocyte average size (right lower panels). Graphs show mean ± SEM of three different sections. Quantifications analyzed by One‐way ANOVA show significant difference among groups *P < 0.05 in white matter astrocyte coverage area; Turkey post‐hoc shows significant differences #P < 0.05 in astrocyte coverage area between THAs (P‐tau+) and neighboring P‐tau negative (P‐tau−) astrocytes in ARTAG.
Figure 3.

Double‐labeling immunofluorescence to GFAP (green) and AT8 (red) showing the morphology of TSAs in the temporal white matter. Short arrow: cells only stained green; arrowhead: cells only stained red. Hyper‐phosphorylated tau‐containing astrocytes have reduced GFAP immunoreactivity. Paraffin sections; nuclei (blue) are stained with DRAQ5TM; bar = 50 μm.
YKL‐40, used as a marker of inflammatory astrocytes 38, and vimentin was expressed in a subpopulation of astrocytes in control and ARTAG cases. The number of vimentin and YKL‐40 positive astrocytes was higher in ARTAG when compared with controls in agreement with reactive astrogliosis 12. However, double‐labelling immunofluorescence and confocal microscopy revealed reduced size and decreased number of immunoreactive processes in TSAs (Figure 4).
Figure 4.

A. Double‐labeling immunofluorescence to YKL‐40 (green) and AT8 (red) in one cluster of TSAs in temporal white matter. B. Double‐labeling immunofluorescence to vimentin (green) and AT8 (red) in temporal white matter. Note decreased YKL‐40 and vimentin immunoreactivity in TSAs. Long arrow: cells with double staining; short arrow: cells only stained green; arrowhead: cells only stained red. Paraffin sections, nuclei stained with DRAQ5TM (blue); bar = 50 μm.
Band pattern of tau in sarkosyl‐insoluble fractions
Dissected basal forebrain and medulla oblongata from ARTAG cases with abundant TSAs were processed in parallel with samples of the frontal cortex from AD cases stage V. Three phospho‐tau bands (anti‐tau phopho‐Ser422) of 68, 64, and 60 kDa were seen in the frontal cortex of cases with AD. In addition, several bands of molecular weight between 50 and 30 kDa together with a lower band of about 23 kDa, of variable intensity among cases, were found in AD. These corresponded to two bands of 4R tau between 68 and 60 kDa, and several bands of lower molecular stained visualized with specific anti‐4R antibodies, respectively. In contrast, the band pattern of ARTAG phospho‐tau using the same antibody and processed in parallel with AD samples showed two bands of 68 and 64 kDa, and several bands of lower molecular weight corresponding to truncated forms of tau. The lower phospho‐tau band of about 23 kDa was absent in ARTAG cases. Curiously, one sample of the medulla oblongata showed a very weak band of 68 kDa and a weak double‐band at 64 kDa. Parallel membranes blotted with 4Rtau antibodies showed a doublet of 64 kDa (Figure 5).
Figure 5.

Gel electrophoresis and western blotting of sarkosyl‐insoluble fractions from frontal cortex of Alzheimer disease stage V (ADV) processed in parallel with ARTAG; upper panel, basal forebrain; lower panel medulla oblongata. Three phospho‐tau bands (antibody P‐tau Ser422) of 68, 64 and 60 kDa; several bands of molecular weight between 50 and 30 kDa, and a lower band of about 23 kDa are seen in AD. These correspond to two bands of 4R tau between 68 and 60 kDa and several bands of lower molecular stained visualized with specific anti‐4R antibodies. In contrast, two bands of 68 and 64 kDa, and several bands of lower molecular weight corresponding to truncated forms of tau are seen in ARTAG. The lower phospho‐tau band of about 23 kDa is absent in ARTAG. Curiously, a very weak band of 68 kDa and a weak double‐band at 64 kDa are seen in medulla oblongata. Parallel membranes blotted with 4Rtau antibodies show a doublet of 64 kDa.
3Rtau and 4Rtau ratios
Although not significant, 3Rtau and 4Rtau mRNA expression levels were reduced in AD and ARTAG cases when compared with controls. The ratio 3Rtau/4Rtau was also reduced in AD and ARTAG cases when compared with controls. Yet no differences were seen between AD and ARTAG (Supporting Information Figure S1).
SOD2, AQP4 and GLT‐1 immunoreactivity
Single immunohistochemistry showed increased SOD2 immunoreactivity in subpial, subependymal and some perivascular astrocytes, and in astrocytes of the white matter and basal forebrain in all cases with ARTAG when compared with middle‐aged individuals. These findings were consistent with senescent modifications of astrocytes 18. Double‐labeling immunofluorescence to SOD2 and phospho‐tau clone AT8 revealed that TSAs and non‐TSAs in the same tissue section were immunoreactive to SOD2 (Figure 6A).
Figure 6.

Double‐labeling immunofluorescence to SOD2 (green) and hyper‐phosphorylated tau (clone AT8: red) (A), AQP4 (green), and tau AT8 (red) (B) in the temporal white matter, and GLT‐1 (green) and hyper‐phosphorylated tau (clone AT8: red) in the subpial region at the level of the medulla oblongata (C). TSAs and non‐TSAs are equally immunoreactive to SOD2. TSAs, like other astrocytes in the temporal white matter, exhibit low AQP4 immunoreactivity which is displaced to the periphery by tau deposits. TSAs have GLT‐1 immunoreactivity at the cell membrane. Long arrow: cells with double staining; short arrow: cells only stained green; arrowhead: cells only stained red. Paraffin sections, nuclei (blue) are stained with DRAQ5TM, A–F, bar = 40 μm; G–I, bar = 10 μm.
AQP4 immunoreactivity was variable from one case to another, but in general terms it was more pronounced in the molecular layer, subependymal region and basal forebrain in ARTAG in comparison with control samples. Individual variations did not permit a realistic quantitative validation in the present series. However, double‐labeling immunofluorescence to AQP4 and tau AT8 in samples of the temporal white matter revealed AQP4 immunoreactivity at the cell membrane of TSAs. A similar pattern was seen in other glial cells in the temporal white matter with no phospho‐tau deposition (Figure 6B).
GLT‐1 immunoreactivity was present in astrocytes of the basal forebrain, temporal white matter, subpial region at the level of the medulla oblongata, and subependymal regions (the regions here assessed) in control and ARTAG cases. Double‐labeling immunofluorescence and confocal microscopy to GLT‐1 and hyper‐phosphorylated tau (clone AT8) identified GLT‐1 immunoreactivity at the cell membrane of TSAs and non‐TSAs in the same tissue section in ARTAG (Figure 6C).
Phosphoproteomics
Phosphosites differences between control and ARTAG cases, as seen in the heat map in Figure 7A, were imputated as MNAR. One‐hundred twenty‐two phosphosites showed higher abundance in ARTAG when compared with controls, and thirty‐six phosphosites were more abundant in controls when compared with ARTAG (Supporting Information Table S1). Since some proteins showed various sites of phosphorylation the total number of differentially phosphorylated proteins was 109 and 31, respectively, for ARTAG and controls (Table 3). Several phosphorylated proteins with identification of phosphorylation positions are shown in Table 4. Among them, GFAP was found to be phosphorylated at positions 8, 14, 82 and 424, and aquaporin 4 was phosphorylated at position 273. Interestingly, many neuronal and glial proteins were differentially phosphorylated in ARTAG. These include proteins of the cytoskeleton, kinases, proteins linked to calcium/calmodulin signaling, cAMP signaling and DNA repair, nuclear and nucleolar regulators, proteins linked to tight junctions, proteins linked to proteolysis, and synaptic proteins, among others (Table 3). A smaller number of proteins showed decreased levels of phosphorylated peptides in ARTAG when compared with controls (Table 3). Regarding microtubule associated proteins (MAPs), phosphorylation of MAP‐tau (as expected), MAP1A, MAP1AA, MAPK1S and MAP2 was greater in ARTAG, whereas phosphorylation of MAP1B, MAP4 and MAP6 was higher in controls.
Figure 7.

A. Heat map of phosphosites in control (CC) and ARTAG (AG) cases showing differences between the two groups. B. Phosphomotif enrichment analysis reveals the motif SP enriched in the ARTAG samples. The SP site is a phosphorylation site used for a wide number of kinases such as MAPKs (including p38) and CDKs.
Table 3.
List of proteins differentially up‐phosphorylated in ARTAG when compared with controls (A) and list of proteins differentially up‐phosphorylated in controls when compared with ARTAG (B). See Supporting Information Table S1 for details of phosphosites.
| (A) | ||
|---|---|---|
| Protein | Accession | Phosphosite/s |
| 1‐phosphatidylinositol 4,5‐bisphosphate phosphodiesterase delta‐3 | Q8N3E9 | S573 |
| Abl interactor 1 | Q8IZP0 | S222 |
| Adenylate cyclase type 6 | O43306 | S54 |
| Amyloid beta A4 protein | P05067 | S441 |
| Ankyrin‐2 | Q01484 | S2405 |
| Ankyrin‐3 | Q12955 | S623/T1443/S3055 |
| AP2‐associated protein kinase 1 | Q2M2I8 | S938 |
| Aquaporin‐4 | P55087 | T273 |
| Arf‐GAP with SH3 domain, ANK repeat and PH domain‐containing protein 1 | Q9ULH1 | S1008 |
| ATP‐dependent 6‐phosphofructokinase, platelet type | Q01813 | T313 |
| B‐cell lymphoma/leukemia 11A | Q9H165 | S608 |
| Beta‐2‐syntrophin | Q13425 | S95 |
| Brefeldin A‐inhibited guanine nucleotide‐exchange protein 1 | Q9Y6D6 | S1079 |
| Brefeldin A‐inhibited guanine nucleotide‐exchange protein 2 | Q9Y6D5 | S277 |
| C‐Jun‐amino‐terminal kinase‐interacting protein 3 | Q9UPT6 | T275 |
| C‐type mannose receptor 2 | Q9UBG0 | S1457 |
| Calcium‐binding and coiled‐coil domain‐containing protein 1 | Q9P1Z2 | S563 |
| Calcium/calmodulin‐dependent 3′,5′‐cyclic nucleotide phosphodiesterase 1C | Q14123 | S469 |
| Calcium/calmodulin‐dependent protein kinase type II subunit gamma | Q13555 | S276 |
| Calmodulin‐regulated spectrin‐associated protein 3 | Q9P1Y5 | S553 |
| cAMP‐dependent protein kinase catalytic subunit alpha | P17612 | T198/S339 |
| cAMP‐regulated phosphoprotein 19 | P56211 | S104 |
| cAMP‐specific 3′,5′‐cyclic phosphodiesterase 4B | Q07343 | S290 |
| CAP‐Gly domain‐containing linker protein 3 | Q96DZ5 | S402 |
| Capping protein, Arp2/3 and myosin‐I linker protein 2 | Q6F5E8 | S991 |
| Catenin beta‐1 | P35222 | S552/S675 |
| Catenin delta‐2 | Q9UQB3 | S201/S285 |
| Centriole, cilia and spindle‐associated protein | Q6IQ19 | S240 |
| Clathrin coat assembly protein AP180 | O60641 | S296 |
| Clathrin interactor 1 | Q14677 | S227/S299 |
| Creatine kinase B‐type | P12277 | T322 |
| Creatine kinase U‐type, mitochondrial | P12532 | S318 |
| Cyclin‐dependent kinase 12 | Q9NYV4 | S1082 |
| Cysteine‐rich protein 2 | P52943 | S114 |
| Dematin | Q08495 | S11 |
| Dendrin | O94850 | S567 |
| DENN domain‐containing protein 4B | O75064 | S736 |
| Dihydropyrimidinase‐related protein 1 | Q14194 | T509 |
| Disks large‐associated protein 1 | O14490 | S397 |
| DNA repair protein XRCC1 | P18887 | S241 |
| E3 ubiquitin‐protein ligase UBR4 | Q5T4S7 | T2724 |
| FERM, RhoGEF and pleckstrin domain‐containing protein 1 | Q9Y4F1 | S427 |
| Glial fibrillary acidic protein | P14136 | S8/Y14/S82/S424 |
| Glutamate receptor‐interacting protein 1 | Q9Y3R0 | S953 |
| Glycylpeptide N‐tetradecanoyltransferase 2 | O60551 | S68 |
| Growth arrest‐specific protein 7 | O60861 | S163 |
| Guanine nucleotide‐binding protein G(I)/G(S)/G(O) subunit gamma‐12 | Q9UBI6 | S7 |
| IQ motif and SEC7 domain‐containing protein 1 | Q6DN90 | S105 |
| Junctional protein associated with coronary artery disease | Q9P266 | S757 |
| Kinase suppressor of Ras 2 | Q6VAB6 | S474 |
| LIM and calponin homology domains‐containing protein 1 | Q9UPQ0 | S670 |
| Liprin‐alpha‐2 | O75334 | S774 |
| LysM and putative peptidoglycan‐binding domain‐containing protein 2 | Q8IV50 | S24 |
| MAP7 domain‐containing protein 1 | Q3KQU3 | S544 |
| Microtubule‐associated protein 1A | P78559 | S384/T2655 |
| Microtubule‐associated protein 1B | P46821 | S2271 |
| Microtubule‐associated protein 1S | Q66K74 | S759 |
| Microtubule‐associated protein 2 | P11137 | T1631 |
| Microtubule‐associated protein tau | P10636 | T529/S579 |
| Monoglyceride lipase | Q99685 | S301 |
| N‐alpha‐acetyltransferase 10 | P41227 | S205 |
| Neurofilament medium polypeptide | P07197 | S558 |
| NSFL1 cofactor p47 | Q9UNZ2 | S114 |
| Nuclear receptor coactivator 5 | Q9HCD5 | S6 |
| Nucleolar and coiled‐body phosphoprotein 1 | Q14978 | S264 |
| Oxidation resistance protein 1 | Q8N573 | S7 |
| Paralemmin‐1 | O75781 | T145/S162 |
| Phosphoglycerate kinase 1 | P00558 | Y76 |
| Plakophilin‐4 | Q99569 | S776 |
| Plectin | Q15149 | S2039 |
| Potassium voltage‐gated channel subfamily A member 2 | P16389 | S441 |
| Protein bassoon | Q9UPA5 | S1362 |
| Protein cordon‐bleu | O75128 | S235 |
| Protein ELFN1 | P0C7U0 | S461 |
| Protein kinase C alpha type | P17252 | S226 |
| Protein kinase C epsilon type | Q02156 | S346 |
| Protein phosphatase 1 regulatory subunit 1A | Q13522 | S6 |
| Rabankyrin‐5 | Q9P2R3 | S861 |
| Ral GTPase‐activating protein subunit alpha‐1 | Q6GYQ0 | S740 |
| Ras‐specific guanine nucleotide‐releasing factor 2 | O14827 | S848 |
| Reticulon‐1 | Q16799 | T300 |
| Serine/arginine‐rich splicing factor 5 | Q13243 | S233 |
| Serine/arginine repetitive matrix protein 1 | Q8IYB3 | S675 |
| Signal‐induced proliferation‐associated 1‐like protein 2 | Q9P2F8 | S194 |
| SLIT‐ROBO Rho GTPase‐activating protein 3 | O43295 | S1068 |
| Sorbin and SH3 domain‐containing protein 1 | Q9BX66 | T497 |
| Spectrin alpha chain, non‐erythrocytic 1 | Q13813 | S1031 |
| Spectrin beta chain, non‐erythrocytic 4 | Q9H254 | S2254 |
| Synapsin‐1 | P17600 | S568 |
| Synaptophysin | P08247 | Y81 |
| Synaptopodin | Q8N3V7 | S754 |
| Syntaphilin | O15079 | S200/S204 |
| T‐complex protein 1 subunit delta | P50991 | T239 |
| Tau‐tubulin kinase 1 | Q5TCY1 | S456 |
| TBC1 domain family member 10B | Q4KMP7 | S678 |
| Thy‐1 membrane glycoprotein | P04216 | S24 |
| Tight junction protein ZO‐1 | Q07157 | S1278 |
| Tight junction protein ZO‐2 | Q9UDY2 | S266 |
| Tripartite motif‐containing protein 2 | Q9C040 | S10 |
| Tuberin | P49815 | S939 |
| Ubiquitin‐associated protein 2‐like | Q14157 | S467 |
| Ubiquitin carboxyl‐terminal hydrolase CYLD | Q9NQC7 | S399 |
| UHRF1‐binding protein 1‐like | A0JNW5 | S989 |
| Uncharacterized protein C9orf172 | C9J069 | S484 |
| Uncharacterized protein KIAA1211‐like | Q6NV74 | S653 |
| Voltage‐dependent P/Q‐type calcium channel subunit alpha‐1A | O00555 | S2463 |
| WAS/WASL‐interacting protein family member 3 | A6NGB9 | T208 |
| Zinc finger CCCH domain‐containing protein 18 | Q86VM9 | S534 |
| Zinc finger Ran‐binding domain‐containing protein 2 | O95218 | S153 |
| (B) | ||
|---|---|---|
| Protein | Accession | Phosphosite/s |
| 2′,3′‐cyclic‐nucleotide 3′‐phosphodiesterase | P09543 | S64/S327 |
| 60 kDa heat shock protein, mitochondrial | P10809 | S70 |
| Ankyrin repeat domain‐containing protein 27 | Q96NW4 | S634 |
| AP‐3 complex subunit beta‐2 | Q13367 | S272 |
| Arf‐GAP with GTPase, ANK repeat and PH domain‐containing protein 1 | Q9UPQ3 | S421 |
| Band 4.1‐like protein 2 | O43491 | S550 |
| Caskin‐1 | Q8WXD9 | S1257 |
| Catenin alpha‐2 | P26232 | S654 |
| E3 ubiquitin‐protein ligase HUWE1 | Q7Z6Z7 | S2362 |
| Guanine nucleotide‐binding protein G(I)/G(S)/G(O) subunit gamma‐2 | P59768 | T52 |
| Hepatocyte cell adhesion molecule | Q14CZ8 | S377 |
| Heterogeneous nuclear ribonucleoprotein U‐like protein 2 | Q1KMD3 | T165 |
| Huntingtin‐interacting protein 1 | O00291 | S320 |
| Inactive ubiquitin carboxyl‐terminal hydrolase 54 | Q70EL1 | S481 |
| Microtubule‐associated protein 1B | P46821 | S970/S995/S1322 |
| Microtubule‐associated protein 4 | P27816 | S507/T521 |
| Microtubule‐associated protein 6 | Q96JE9 | S812 |
| Nuclear receptor‐binding protein | Q9UHY1 | S2 |
| Nucleolar protein 56 | O00567 | S569 |
| Pecanex‐like protein 3 | Q9H6A9 | S1955 |
| Potassium voltage‐gated channel subfamily KQT member 2 | O43526 | S472 |
| Protein kinase C gamma type | P05129 | T655 |
| Rho GDP‐dissociation inhibitor 1 | P52565 | S24 |
| Rho guanine nucleotide exchange factor 7 | Q14155 | S249 |
| Serrate RNA effector molecule homolog | Q9BXP5 | S4 |
| Transcription intermediary factor 1‐beta | Q13263 | S594 |
| Transmembrane protein 229A | B2RXF0 | S4 |
| Tumor protein D52 | P55327 | S144 |
| UV excision repair protein RAD23 homolog A | P54725 | S123 |
| Vinculin | P18206 | S290/S346 |
| Vinexin | O60504 | S545 |
Table 4.
List of phosphorylated proteins in ARTAG and identification of phosphorylation sites (probability site value, pRS, >75% is highlighted in yellow).
| Isoform name | Peptide sequence | Position peptide | Position protein |
|---|---|---|---|
| Glial fibrillary acidic protein | RSYVSSGEMMVGGLAPGR | 3 | 14 |
| Glial fibrillary acidic protein | DGEVIKESK | 8 | 424 |
| Glial fibrillary acidic protein | RITSAAR | 4 | 8 |
| Glial fibrillary acidic protein | FASYIEK | 3 | 82 |
| Isoform Tau‐C of microtubule‐associated protein tau | TPSLPTPPTR | 1 | 212 |
| Isoform Tau‐C of microtubule‐associated protein tau | IGSTENLK | 3 | 262 |
| Potassium voltage‐gated channel subfamily A member 2 | IPSSPDLK | 4 | 441 |
| cAMP‐dependent protein kinase catalytic subunit alpha | TWTLCGTPEYLAPEIILSK | 3 | 198 |
| cAMP‐dependent protein kinase catalytic subunit alpha | GPGDTSNFDDYEEEEIRVSINEK | 19 | 339 |
| Catenin beta‐1 | RTSMGGTQQQFVEGVR | 3 | 552 |
| Catenin beta‐1 | RLSVELTSSLFR | 3 | 675 |
| Microtubule‐associated protein 1A | STTSQVTPAEEK | 7 | 2655 |
| Microtubule‐associated protein 1B | SKPLAASPKPAGLK | 7 | 2271 |
| Tuberin | STSLNERPK | 3 | 939 |
| Aquaporin‐4 | AAQQTKGSYMEVEDNR | 5 | 273 |
| Protein phosphatase 1 regulatory subunit 1A | MEQDNSPRK | 6 | 6 |
| Calcium/calmodulin‐dependent protein kinase type II subunit gamma | STVASMMHR | 1 | 276 |
| Calcium/calmodulin‐dependent 3′,5′‐cyclic nucleotide phosphodiesterase 1C | RSSLNSISSSDAK | 3 | 469 |
| Tau‐tubulin kinase 1 | VNSPESER | 3 | 456 |
| C‐Jun‐amino‐terminal kinase‐interacting protein 3 | SNTPTSSVPSAAVTPLNESLQPLGDYGVGSK | 3 | 275 |
| Catenin delta‐2 | ATGQSFSQGTTSR | 5 | 201 |
| Catenin delta‐2 | GGSAPEGATYAAPR | 3 | 285 |
| Neurofilament medium polypeptide | EGSSEKEEGEQEEGETEAEAEGEEAEAKEEK | 3 | 558 |
Phosphomotif‐enriched analysis revealed a motif enriched in ARTAG (SP). This motif is a phosphorylation site used for a wide number of kinases such as MAPK (including p38) and CDKs (Figure 7B).
Immunohistochemistry of selected phosphorylated proteins in ARTAG
Double‐labeling immunofluorescence revealed that TSAs co‐localized GFAP‐P, PKA‐P and p38‐P. GFAP‐P was expressed in hyper‐phosphorylated tau‐bearing and non‐hyper‐phosphorylated tau‐bearing astrocytes in the temporal white matter. TSAs co‐localized active forms (phosphorylated at specific sites) of kinases p38 and PKA α/β. Tuberin‐P was expressed in neurons of the hippocampus but not in tau‐containing astrocytes (Figure 8).
Figure 8.

Double‐labeling immunofluorescence with antibodies against GFAP‐P and tau Thr181 (A), anti‐PKA‐P (B), anti‐p38‐P (C) and anti‐tuberin‐P (D) and AT8 in ARTAG. TSAs contain GFAP‐P, PKA‐P and p38‐P but not tuberin‐P. GFAP‐P is expressed in hyper‐phosphorylated tau‐bearing and non‐hyper‐phosphorylated tau‐bearing astrocytes in the temporal white matter. Tuberin‐P is expressed in neurons of the hippocampus but not in tau‐containing astrocytes. Long arrow: cells with double staining; short arrow: cells only stained green; arrowhead: cells only stained red. Paraffin sections; nuclei (blue) are stained with DRAQ5TM; bar = 40 μm.
Tau seeding in inoculated mice
Mice injected with AD fractions showed phospho‐tau deposits in the fimbria, corpus callosum and neurons of the hippocampus seven months after inoculation. The distribution and profile in the two mice inoculated with homogenates from two different AD cases was the same as the pattern already described by others 18 thus validating those observations and serving as positive controls in the present series (data not shown).
The first group of six ARTAG‐treated mice were injected at the age of 7 months, three in the ventricle and three in the hippocampus, and killed at the age of 10 months. No tau deposits were seen following intraventricular injection. However, intracellular deposits of hyper‐phosphorylated tau were found in threads and in a few cells in the fimbria, lateral corpus callosum and lateral part of the hippocampus in two of the three mice injected in the hippocampus (Figure 9A,B).
Figure 9.

Hyper‐phosphorylated tau containing cells following intra‐hippocampal inoculation of sarkosyl‐insoluble fractions from ARTAG cases to WT mice. A, B. Inoculated at 7 months and killed at the age of 10 months; C–L. Inoculated at 3 months and killed at the age of 10 months. A, C: fimbria; B: hippocampus; D–F, I: corpus callosum; J, K: CA1 region of the hippocampus; H: subiculum; G–L: dentate gyrus. A–I: antibody tau AT8; J: anti‐4Rtau; K, L: anti‐3Rtau. Paraffin sections slightly counterstained with hematoxylin; A–L, excepting D, bar in L = 25 μm; D, bar = 100 μm.
A second group of mice was injected into the hippocampus at the age of 3 months and killed at the age of 10 months; four animals were inoculated with ARTAG and two with vehicle alone. All ARTAG‐injected animals showed hyper‐phosphorylated tau deposits in the fimbria, fornix, corpus callosum traversing the contralateral hemisphere and the hippocampal complex including gyrus dentatus, CA1 and CA3 region of the hippocampus and subiculum (Figure 9C–I). Curiously, cells were positive to 4Rtau (Figure 9J), as expected, but also to 3Rtau (Figure 9K,L). Double‐labeling immunofluorescence and confocal microscopy disclosed hyper‐phosphorylated tau deposition in neurons and astrocytes, as revealed with anti‐NeuN and anti‐GFAP antibodies, respectively, in animals with short interval between inoculation and examination (Figure 10A,B); microglia, as revealed with Iba‐1 antibodies, did not contain hyper‐phosphorylated tau (Figure 10C). Similar intracellular localization of hyper‐phosphorylated tau was found in neurons and astrocytes in animals with long interval between inoculation and neuropathological examination, as revealed with the same antibodies; microglia did not contain hyper‐phosphorylated tau deposits (Figure 11A,C–F). In addition, hyper‐phosphorylated tau was found in oligodendroglia mainly in corpus callosum as revealed by double‐labeling immunofluorescence using anti‐Olig2 antibodies (Figure 11G,H). Finally, the possibility that hyper‐phosphorylated tau deposition was an active process within seeds was sustained by co‐localization of active p38 kinase (phosphorylated at Thr180‐Tyr182) only in cells containing hyper‐phosphorylated tau (Figure 11B).
Figure 10.

WT mice inoculated with ARTAG in the hippocampus at the age of 7 months and killed at the age of 10 months. A. Double‐labeling immunofluorescence to NeuN (green) and P‐tau Thr181 (red). B. Double‐labeling immunofluorescence to GFAP (green) and AT8 (red). C. Double‐labeling immunofluorescence to Iba‐1 (green) and AT8 (red). Subpopulations of neurons and astrocytes, but not microglia, contain hyper‐phosphorylated tau. Paraffin sections, nuclei stained with DRAQ5TM (blue). Long arrow: cells with double staining; short arrow: cells only stained green; arrowhead: cells only stained red. A, bar = 30 μm; B, bar = 20 μm; C, bar = 50 μm.
Figure 11.

WT mice inoculated with ARTAG in the hippocampus at the age of 3 months and killed at the age of 10 months. A. Double‐labeling immunofluorescence to NeuN (green) and tauThr181 (red). B. Double‐labeling immunofluorescence to phosphorylated p38 Thr180‐Tyr182 (green) and AT8 (red). C, D. Double‐labeling immunofluorescence to GFAP (green) and AT8 (red). E, F. Double‐labeling immunofluorescence to Iba‐1 (green) and AT8 (red). G, H. Double‐labeling immunofluorescence to Olig2 (green) and AT8 (red). Subpopulations of neurons (A, B), astrocytes (C, D) and oligodendrocytes (G, H) contain hyper‐phosphorylated tau. Hippocampal neurons containing hyper‐phosphorylated tau co‐express active tau kinase p38. Long arrow: cells with double staining; short arrow: cells only stained green; arrowhead: cells only stained red. Paraffin sections, nuclei stained with DRAQ5TM (blue); bar = 25 μm.
Discussion
The morphological characteristics and distribution of TSAs in this ARTAG series with no tau deposition in neurons or with NFTs and pre‐tangles restricted to the entorhinal and transentorhinal cortex are similar to those described in ARTAG associated with tauopathies 28, 29, 31, 36. The pattern of tau phosphorylation of TSAs identified here does not differ from TSAs associated with other tauopathies including AD and AGD 14, 37. Additional features of TSAs include lack of evidence of truncated tau using specific antibodies against C‐terminal and N‐terminal regions, together with negativity to tau‐C3 which recognizes truncated tau at Asp421. Gel electrophoresis and western blotting of sarkosyl‐insoluble fractions show two bands of 68 and 64 kDa (in some areas as a doublet) and several weaker bands of lower molecular weight. In no case are triple bands of 68, 64, and 60 kDa and a lower band of truncated tau of about 20 kDa, typical of AD, found in ARTAG. In conclusion, TSAs are composed of hyper‐phosphorylated 4Rtau with features of pre‐tangles lacking tau truncation at terminal regions.
Considering that TSAs are present in aged brains, further analysis was carried out to learn about categorization of these astrocytes and functional implications of this particular astrocytopathy 12. TSAs show reduced GFAP expression, reduced volume, and reduced numbers of branches. This was further recognized using anti‐vimentin and YKL‐40 antibodies. SOD2 immunoreactivity, which is augmented in senescent astrocytes 48, is increased in TSAs when compared with astrocytes of younger individuals. Moreover, neighboring astrocytes show increased area coverage, and increased GFAP, vimentin and YKL‐40 immunoreactivity. Therefore, TSAs are a subpopulation of astrocytes showing senescent features 18, 46, 48.
Astrocytes have specific functions mediated by selective molecules and pathways, among them the modulation of glutamate transport through astroglial glutamate transporter solute carrier family 1, member 2 (GLT‐1/EAAT2) 39, 42. Double‐labeling immunofluorescence and confocal microscopy identifies GLT‐1 immunoreactivity at the cell membrane of TSAs and non‐TSAs in the same tissue sections. Decreased GLT‐1 immunoreactivity in tau‐containing astrocytes has been reported in a familial behavioral variant of frontotemporal dementia associated with astrocyte‐predominant tauopathy, in which astrocytes show advanced stage of tangle formation with tau truncation and ubiquitination 13. GLT‐1 expression is also altered in transgenic mice with astroglial tau phosphorylation 10; tau in transgenic mice is abnormally phosphorylated, ubiquitinated, and filamentous; abnormal astrocytes are variably positive with thioflavine S 17. Therefore, relative preservation of GLT‐1 in TSAs compared with astrocytes in the previous conditions may be related to the less advanced stage of cellular damage linked to tau phosphorylation and truncation in ARTAG.
Another important function of astrocytes is the regulation of water homeostasis through specific water channel aquaporin 4. AQP4 is expressed at the cell membrane of astrocytes, particularly at the perivascular, subpial and subependymal interfaces 2. Double‐labeling immunofluorescence to AQP4 and tau AT8 in samples of the temporal white matter shows AQP4 immunoreactivity in TSAs and in other astrocytes. Due to individual variations we are not able to conclude that AQP4 immunoreactivity is specifically altered in TSAs. However, this does not dismiss the possibility of blood‐brain barrier dysfunction in ARTAG as suggested in other studies 33, 35.
The study of the phosphoproteome in relatively pure cases of ARTAG, although limited by the small number of cases, avoids possible contamination of altered tau in ARTAG associated with other tauopathies. Several proteins in ARTAG have differential phosphorylation marks when compared with controls, among them AQP4 at Thr273 and GFAP at positions 8, 14, 82 and 424. GFAP phosphorylation at Ser8 was further validated by immunohistochemistry and immunofluorescence and characterized by confocal microscopy. GFAP is phosphorylated at different sites of the amino‐terminal, thus modulating filaments assembly 24, 43, 52. Several kinases phosphorylate GFAP at specific sites; Cdc2 kinase (cyclin dependent kinase 1) phosphorylates GFAP at Ser8 whereas Ca(2+)‐CaM‐dependent protein kinase II phosphorylates GFAP at Ser13, Ser17, Ser34 and Ser389 56. The role of cAMP‐dependent and Ca2+‐dependent protein kinases on GFAP phosphorylation has also been studied in digitonin‐permeabilized astrocytes exposed to cAMP and Ca2+ which increases the phosphorylation state of GFAP 25. Despite these achievements, little is known about the effect of combined phosphorylation at different sites on GFAP filament assembly 52.
Phosphorylation of some aquaporins has been proposed as regulating their water permeability via gating of the channel itself. Certain protein kinases phosphorylate AQP4 thus facilitating AQP4 trafficking and water permeability 20, 26. However, studies in Xenopus oocytes have shown that phosphorylation at COOH‐terminal residues Ser180, Ser276, Ser285, Ser315, Ser316, Ser321 and Ser322 does not modulate trafficking or channel gating 1, 3, 47. Thus, regulatory patterns and physiological roles for AQP4 remain to be fully explored 2; functional studies are needed to learn about the functional role of AQP4 phosphorylation at Thr273 and its implication in ARTAG.
Phosphoproteomics has also evidenced increased phosphorylation marks in several kinases including calcium/calmodulin‐dependent protein kinase type II subunit gamma, cAMP‐dependent protein kinase catalytic subunit alpha, c‐Jun‐amino‐terminal kinase‐interacting protein 3, cyclin‐dependent kinase 12, protein kinase C alpha type and protein kinase C epsilon type. Since a typical protein kinase must distinguish one from among a few hundred bona fide phosphorylation sites in a background of approximately 700 000 potentially phosphorylatable residues 57, it is premature to advance which are the substrates of such activated kinases in the context of ARTAG. In spite of the large number of putative targets, double‐labeling immunofluorescence has shown co‐localization of active kinases p38 and PKA α/β with hyper‐phosphorylated tau in TSAs in ARTAG. Moreover, many other proteins are phosphorylated at specific sites in ARTAG including MAP7 domain‐containing protein 1, microtubule‐associated protein 1A, microtubule‐associated protein 1AA, microtubule‐associated protein 1B, microtubule‐associated protein 1S and microtubule‐associated protein 2, in addition to microtubule‐associated protein tau. Furthermore, increased phosphorylation of microtubule‐associated protein 1B, microtubule‐associated protein 4 and microtubule‐associated protein 6 is found in controls compared with ARTAG. Several neuronal proteins, such as synaptic proteins synapsin‐1, synaptophysin, synaptopodin and synaptophilin and tuberin, are also differentially phosphorylated in ARTAG, indicating that differences in the phosphorylation state of various cytoskeletal and non‐cytoskeletal proteins are not limited to astrocytes but also compromise neurons. Little is known about functional implications of tuberin phosphorylation. However, since tuberin is linked to microtubule biology through ROCK2 signaling 15, it can be suggested that changes in tuberin phosphorylation modify microtubule organization.
Several studies in AD have located differentially phosphorylated proteins in the cerebral cortex and hippocampus using bi‐dimensional gel electrophoresis and mass spectrometry. Most proteins are linked to energy metabolism, neuronal plasticity, signal transduction and oxidative stress responses 11, 55, 59. These studies also identify GFAP as a phosphorylated protein in AD. More recently, phosphopeptide enrichment and LC‐MS/MS assessment have identified more than one thousand phosphorylated proteins in AD 53. In another study, most of the core phosphoproteins are directly connected and form a functional network linked to synaptic spine formation. Systems biology analyses suggest that over‐activated kinases including protein kinases C and calmodulin‐dependent kinases initiate synapse pathology 51. The change of the core network starts at a preclinical stage even before histological β‐amyloid deposition 51.
The study of Tagawa et al 51 points to similarities between AD and ARTAG regarding phosphorylation of similar kinases and synaptic proteins. These modifications in AD are independent of β‐amyloid and phospho‐tau deposition, and in ARTAG cases independent of neurofibrillary tangle pathology as well. In addition, GFAP phosphorylation is not restricted to ARTAG but also occurs in AD.
The present observations suggest that TSAs are just part of the modifications occurring in ARTAG. TSAs are developed in selected populations of senescent astrocytes in a context of increased protein phosphorylation among which are several kinases with the capacity to phosphorylate a large number of substrates. These observations in several regions not associated with neuronal tau pathology in ARTAG identify changes which are common to AD, and they may explain the frequency of ARTAG in AD and other tauopathies in the elderly.
Finally, the present study shows for the first time the capacity of tau seeding of sarkosyl‐insoluble fractions enriched in hyper‐phosphorylated tau from selected ARTAG cases in which TSAs are the only source of abnormal hyperphosphorylated tau. Therefore, certain subpopulations of astrocytes may be primary carriers for abnormal tau seeding. Moreover, tau seeding in our model occurred not only in host astrocytes but also in neurons and oligodendroglia, thus pointing out that neurons and oligodendrocytes can be seed targets of astrocyte‐derived hyper‐phosphorylated tau. This is important, as hyper‐phosphorylated tau inclusions are frequent in oligodendrocytes in AGD and in other tauopathies 16, 27. Present observations support the hypothesis that TSAs may facilitate tau hyper‐phosphorylation and deposition in neurons and other glial cells in human tauopathies, and they point to the cardinal role of astrocytopathy in the pathogenesis of neurodegenerative diseases with abnormal protein aggregates. The morphology of tau‐containing astrocytes after ARTAG inoculation in mice does not have the morphology of TSAs. Its distribution and that of tau‐containing neurons and oligodendrocytes in ARTAG‐inoculated mice correlate with the inoculation site rather than with the distribution of TSAs in ARTAG. In fact, the same pattern is seen following the inoculation of AD homogenates, in agreement with previous observations with AD extracts 19.Therefore, additional factors must be examined in the future mainly those related with the age of the inoculated animals. ARTAG is a tauopathy related to aging and TSAs are senescent astrocytes. Inoculation of ARTAG (and AD) homogenates in old animals is mandatory to move closer to the environment occurring in old age.
Financial Disclosure and Conflict of Interests
No relevant data.
Supporting information
Figure S1. mRNA expression levels of 3R tau and 4R tau in the temporal white matter in middle‐aged (MA) control cases, Alzheimer's disease (AD) and ARTAG cases (A), and 3Rtau/4Rtau mRNA ration in every group (B). No significant differences are observed at mRNA level, but a tendency to decreased 3Rtau and 4Rtau mRNA, and reduced 3R/4R ratio is found in AD and ARTAG compared with controls.
Table S1. Whole data of 122 differentially occupied phosphosites differentially expressed in ARTAG compared with controls, and 36 phosphosites differentially occupied in controls when compared with ARTAG.
Acknowledgments
We wish to thank Guadalupe Espada from the CRG‐UPF proteomics unit for her support, and Tom Yohannan for editorial assistance. This study was funded by Ministry of Economy and Competitiveness, Institute of Health Carlos III‐Fondos FEDER, a way to build Europe: FIS PIE14/00034 and PI17/00809 to IF; and 13FIS037 and PT13/0001/0033 to IDIBELL Proteomics Unit, ProteoRed, PRB2‐ISCIII; and Miguel Servet‐CP16/00041 to FLl. IDIBELL proteomic unit and CRG/UPF Proteomics Unit are members of Proteored, PRB3 and is supported by grant PT17/0019, PE I+D+i 2013‐2016, funded by ISCIII and FEDER.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Figure S1. mRNA expression levels of 3R tau and 4R tau in the temporal white matter in middle‐aged (MA) control cases, Alzheimer's disease (AD) and ARTAG cases (A), and 3Rtau/4Rtau mRNA ration in every group (B). No significant differences are observed at mRNA level, but a tendency to decreased 3Rtau and 4Rtau mRNA, and reduced 3R/4R ratio is found in AD and ARTAG compared with controls.
Table S1. Whole data of 122 differentially occupied phosphosites differentially expressed in ARTAG compared with controls, and 36 phosphosites differentially occupied in controls when compared with ARTAG.
