Table 4:
Repetitive elements in the C. heterophylla genome
| Class | No. | Length (bp) | Percent (%) |
|---|---|---|---|
| Class I | 584,311 | 169,738,018 | 45.78 |
| Class I/DIRS | 18,638 | 7,059,337 | 1.9 |
| Class I/LARD | 303,288 | 76,033,830 | 20.51 |
| Class I/LINE | 60,182 | 18,890,786 | 5.1 |
| Class I/LTR/Copia | 101,158 | 38,719,023 | 10.44 |
| Class I/LTR/Gypsy | 83,300 | 41,302,761 | 11.14 |
| Class I/LTR/Unknown | 1,953 | 1,080,718 | 0.29 |
| Class I/PLE | 5,600 | 4,125,513 | 1.11 |
| Class I/SINE | 5,344 | 1,058,985 | 0.29 |
| Class I/TRIM | 3,828 | 1,023,113 | 0.28 |
| Class I/Unknown | 1,020 | 244,561 | 0.07 |
| Class II | 77,407 | 24,382,510 | 6.58 |
| Class II/Crypton | 455 | 109,226 | 0.03 |
| Class II/Helitron | 27,254 | 8,348,317 | 2.25 |
| Class II/MITE | 1,112 | 194,088 | 0.05 |
| Class II/Maverick | 754 | 165,986 | 0.04 |
| Class II/TIR | 44,403 | 15,342,483 | 4.14 |
| Class II/Unknown | 3,429 | 459,116 | 0.12 |
| Potential host gene | 46,369 | 9,994,181 | 2.7 |
| SSR | 1,135 | 265,113 | 0.07 |
| Unknown | 116,728 | 26,584,597 | 7.17 |
| Total | 825,950 | 210,255,221 | 56.71 |
DIRS: dictyostelium intermediate repeat sequence; LARD: large retrotransposon derivative; LINE: long interspersed nuclear element; LTR: long terminal repeat; MITE: miniature inverted-repeat transposable element; PLE: Penelope-like element; SINE: short interspersed nuclear element; SSR: simple sequence repeat; TIR: terminal inverted repeat; TRIM: terminal-repeat retrotransposons in miniature.