Dear Editor,
Takotsubo syndrome (TS) is a stress-induced non-ischaemic cardiomyopathy that is more common in women, but is associated with higher morbidity and mortality in males. Also known as broken-heart syndrome, TS is characterised by transient left ventricular (LV) dysfunction independent of obstructive coronary artery disease. TS is a polygenic condition and nowhere is this more evident than the use of positive inotropes, such as isoprenaline (ISO) in pre-clinical models.1 There is no standard therapy for broken-heart syndrome because the mechanisms underlying the condition remain unknown. Furthermore, there is no consensus on predisposition for Takotsubo2 and our goal was to better understand the regulatory mechanism as a first step towards improved treatment plans. Suberanilohydroxamic acid or SAHA, a drug approved for cancer treatment by the US Food and Drug Administration has previously been shown to improve cardiopulmonary function.3 We tested the hypothesis that the cardioprotective benefit of SAHA in a pre-clinical model of Takotsubo is conferred by an epigenetic acetylation/deacetylation (Ac/Dc) axis.
Eight-week-old 129/Sv mice were divided into four groups of five animals. Group 1 received intraperitoneal (IP) saline and served as healthy controls. Mice in group 2 served as a SAHA only control receiving IP injections every third day (100 mg/kg, illustrated by red arrows). The remaining groups (3 and 4) received subcutaneous isoprenaline (ISO, 25 mg/kg) once daily for the first 5 days to induce cardiomyopathy (illustrated by blue arrows). The remaining ISO-injury mice were therapeutically administered SAHA (ISO/SAHA). Group 4 commenced SAHA treatment on the day after ISO administration was concluded (ISO/SAHA, referred to as Reversal or “REV”) (Fig. 1a).
ISO significantly increased picrosirius-stained collagen content in the infarcted LV (Fig. 1b, group 3). SAHA treatment attenuated this ISO-induced collagen content (Fig. 1b, group 4). As protein accumulation is characteristic of TS, we assessed collagen deposition.4 SAHA treatment attenuated ISO-induced injury by decreasing collagen. Quantitative histological analysis confirmed that LV collagen content was ~3% for untreated and SAHA only groups when compared to 8% in the ISO-induced injury group. Collagen deposition in the REV group was reduced to 4%. These findings indicated that treatment with SAHA reduced ISO-induced LV collagen deposition.
Since the area of ISO-induced injury was vastly improved following SAHA treatment, we assessed protein accumulation using chemical mapping. For each tissue section, an FPA-FTIR image of 6 × 8 grids were collected on the area of infarction of 1.04 × 1.38 mm2 (Fig. 1c). The absorbance spectra showed a decrease in the intensity of the amide I band (α-helix secondary protein structure) and that was correlated with an increase in the amide II band (Fig. 1d, i). The amide I/II intensity ratios obtained from the inverted second derivative spectra confirmed these changes, and showed a decrease in all treatment groups (ISO = 1.8, SAHA = 1.8, ISO/SAHA = 1.6) when compared to the control group (2.0) (Fig. 1d, ii). The SAHA group had an increased intensity at 1515 cm−1 that was associated with α-helical protein structures. Given that collagen is largely comprised of α-helical structures, the FPA-FTIR imaging results were consistent with histological observations. Taken together, this data suggested that treatment with SAHA influenced the composition of secondary protein structures in ISO-induced injury.
The transcriptome of Takotsubo and how SAHA influences gene behaviour is poorly understood. Apical LV tissues were assessed for Takotsubo-like response to SAHA treatment using Li-COR protein quantification, transcriptional expression index (TEI) by RNA-seq (sequencing) and H3K9/14 acetylation/deacetylation by ChIP-seq (Fig. 1e). Gene set enrichment analysis (GSEA) identified pathways implicated in ISO-induced cardiomyopathy were vastly improved by SAHA (Fig. 1f). As these results suggested that treatment with the hydroxamic acid could influence cardiac remodelling, we assessed actively transcribed genes that belong to these highly connected pathways. Histone H3 acetylation (ac) and methylation (me) are powerful determinants that regulate cardiac transcription. We assessed H3K9/14ac, H3K4me3, H3K9me1, H3K9me2, H3K9me3, H3K27me3 and H3K36me3 (Fig. 1g). Li-COR analyses showed a dramatic change in H3K9/14ac following ISO-induced injury and SAHA treatment (Fig. 1h). H3K4me3 another permissive mark of gene transcription was also elevated in SAHA-treated animals (REV). Since the acetyltransferases CBP (KAT3A) and EP300 (KAT3B) are known to regulate cardiac transcription and are subject to the Ac/Dc axis by SAHA,5 we assessed their protein levels. We also examined co-repressive deacetyltransferases RYBP, HDAC1, HDAC2 and HDAC3. We showed that CBP (KAT3A) protein levels were reduced in ISO-induced cardiomyopathy but reversed by SAHA treatment when compared to control animals (no injury) (Fig. 1i). Histone acetyltransferase EP300 (KAT3B) was significantly reduced in the REV group with RYBP reduced in ISO-induced cardiomyopathy animals. These results suggested the Ac/Dc modifiers that influence ISO-induced cardiomyopathy were attenuated by SAHA.
Pathways directly regulated by ISO-induced cardiomyopathy and reversed by SAHA included cardiac development, heart failure, congestive heart failure, cardiomyopathy, cardiac scarring, collagen biosynthesis, extracellular matrix organisation and cardiac metabolism (Fig. 1j). We also assessed genetic candidates associated with predisposition to Takotsubo derived recently from the Swedish Coronary Angiography and Angioplasty Registry (SCAAR).2 RNA-seq shows SAHA treatment influenced the TEI (transcriptional expression index) of genes with a shift towards cardiac benefit (Fig. 1k). These results suggested that the core pathways identified could be regulated by SAHA treatment. The recent SCAAR screen found no genetic link with Takotsubo for polymorphisms in the Adrb1, Bag3 and Grk5 genes.2 However, we observed a dramatic shift in the TEI following SAHA treatment, suggesting the expression of stress-induced genes could also be under epigenetic control.
While total histone acetylation is often assessed by protein blotting it is not informative of genomic location. To determine whether the cardiac benefit conferred by SAHA treatment was regulated by an Ac/Dc axis, we performed chromatin immunoprecipitation assays from LV tissues followed by sequencing (ChIP-seq). We assessed H3K9/14ac signals in all groups. SAHA treatment influenced acetylation and deacetylation of genes implicated with Takotsubo (Fig. 1l). Surprisingly, this included prominent lysine deacetylation of the SCAAR-associated genes Adrb1, Bag3 and Grk5.2 These results highlighted that the myocardial transcriptome was not only influenced by ISO—but for the core genes identified in this study— lysine acetylation at transcribed genes were either partially or fully restored by SAHA (Fig. 1m).
This is the first detailed description of the cardiac transcriptome using SAHA as a therapeutic drug in a model of Takotsubo. We propose that the expression of genes that are influenced by SAHA are neither random nor limited to any one gene, but rather, co-ordinate pathways that preserve cardiac function. While H3K9/14ac selectivity was previously described for EP300 gene targets5 in this study we observed the expression of stress-induced genes were influenced in the REV model (ISO/SAHA vs. Control) as well as the Ac/Dc index in the REV (ISO/SAHA) vs. ISO groups. Further work is required to learn the regulatory components such as CBP/EP300 and other RYBP-associated HDAC components because of the paradoxical Ac/Dc nexus5 (Fig. 1n). In conclusion, the expanded gene list described for Takotsubo-like cardiomyopathy is an important step towards establishing an epigenetic framework to further understand the effects of HDAC inhibitors and the continued development of compounds like SAHA that have cardioprotective benefits for broken-heart syndrome.
Supplementary information
Acknowledgements
A.E-O. dedicates this article to his late grandmother. Professor Sam El-Osta is a National Health and Medical Research Council (NHMRC) Senior Research Fellow (1154650). Funded by NSFC (81561128017) and NHMRC (1113188) International Joint Programme.
Author contributions
S.R., P.M., C.S. performed ISO-induced cardiomyopathy. N.M., J.V., T.C. performed FPA-FTIR chemical imaging. I.K., S.M., J.O., H.K.N., K.A.H. performed, analysed and interpreted the data from Li-COR, ChIP-Seq and RNA-Seq including bioinformatic analyses. A.E-O. interpreted the data, prepared the figures and wrote the manuscript. All authors read and approved the final manuscript.
Data availability
The datasets analysed in the current study are available from the corresponding author on reasonable request.
Competing interests
The authors declare no competing interests.
Study approval
This study was approved by the Monash University Animal Ethics Committee.
Footnotes
These authors contributed equally: Ishant Khurana, Scott Maxwell, Simon Royce
Supplementary information
The online version contains supplementary material available at 10.1038/s41392-021-00546-y.
References
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Supplementary Materials
Data Availability Statement
The datasets analysed in the current study are available from the corresponding author on reasonable request.