Proposed mechanisms that distinguish CD from UC pathophysiology based on differences in the urine metabolic phenotype of pediatric IBD subtypes prior to induction therapy. Key metabolic pathways include tryptophan/phenylalanine catabolism, mucin barrier function, and purine degradation pathways in the gut, liver and circulatory systems. Thick arrows represent enzymatic conversions and dotted arrow represent binding to AHR. AHR: aryl hydrocarbon receptor; IDO: indoleamine 2,3-dioxygenase; TnaA: tryptophanase, PAA: phenylacetic acid gene cluster; HGPRT: hypoxanthine-guanine phosphoribosyltransferase.