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. 2021 Apr 2;24(5):102393. doi: 10.1016/j.isci.2021.102393

Figure 3.

Figure 3

GraphSCI identifies cell types in simulated data with two cell groups (SIM-T2)

(A) The comparison of clustering performances of scRNA-seq, scImpute, SAVER, DCA, DeepImpute, and GraphSCI, measured by ARI, CA, and SC.

(B) The two principle components by t-SNE from simulated scRNA-seq data, imputed matrix by scImpute, SAVER, DCA, DeepImpute, GraphSCI. Each cell is colored by cell groups.