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GraphSCI improves g differential expression analysis
(A) The bar plots show the performances of DEG detections from raw and imputed scRNA-seq data sets based on the gold standard defined by the bulk RNA-seq data set.
(B) The expression for selected signature genes (LEFTY1, SOX2) of H1 and DEC cells, respectively.
(C) The UMAP plots of the single cells overlaid by the expression of SOX2 and LEFTY1, which is the marker gene of H1 and DEC cells, respectively.
