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. 2021 Apr 22;15(4):e0009299. doi: 10.1371/journal.pntd.0009299

Worldwide epidemiology of Crimean-Congo Hemorrhagic Fever Virus in humans, ticks and other animal species, a systematic review and meta-analysis

Jean Thierry Ebogo Belobo 1,2, Sebastien Kenmoe 3,*, Cyprien Kengne-Nde 4, Cynthia Paola Demeni Emoh 5, Arnol Bowo-Ngandji 5, Serges Tchatchouang 6, Jocelyne Noel Sowe Wobessi 3, Chris Andre Mbongue Mikangue 5, Hervé Raoul Tazokong 5, Sandrine Rachel Kingue Bebey 5, Efietngab Atembeh Noura 1, Aude Christelle Ka’e 7, Raïssa Estelle Guiamdjo Simo 5, Abdou Fatawou Modiyinji 3, Dimitri Tchami Ngongang 5, Emmanuel Che 5, Sorel Kenfack 5, Nathalie Diane Nzukui 8, Nathalie Amvongo Adjia 1, Isabelle Tatiana Babassagana 5, Gadji Mahamat 5, Donatien Serge Mbaga 5, Wilfred Fon Mbacham 2, Serge Alain Sadeuh-Mbah 3, Richard Njouom 3,*
Editor: Michael R Holbrook9
PMCID: PMC8096040  PMID: 33886556

Abstract

There are uncertainties about the global epidemiological data of infections due to Crimean-Congo hemorrhagic fever virus (CCHFV). We estimated the global case fatality rate (CFR) of CCHFV infections and the prevalence of CCHFV in humans, ticks and other animal species. We also explored the socio-demographic and clinical factors that influence these parameters. In this systematic review with meta–analyses we searched publications from database inception to 03rd February 2020 in Pubmed, Scopus, and Global Index Medicus. Studies included in this review provided cross-sectional data on the CFR and/or prevalence of one or more targets used for the detection of CCHFV. Two independent investigators selected studies to be included. Data extraction and risk of bias assessment were conducted independently by all authors. Data collected were analysed using a random effect meta-analysis. In all, 2345 records were found and a total of 312 articles (802 prevalence and/or CFR data) that met the inclusion criteria were retained. The overall CFR was 11.7% (95% CI = 9.1–14.5), 8.0% (95% CI = 1.0–18.9), and 4.7% (95% CI = 0.0–37.6) in humans with acute, recent, and past CCHFV infections respectively. The overall CCHFV acute infections prevalence was 22.5% (95% CI = 15.7–30.1) in humans, 2.1% (95% CI = 1.3–2.9) in ticks, and 4.5% (95% CI = 1.9–7.9) in other animal species. The overall CCHFV recent infections seroprevalence was 11.6% (95% CI = 7.9–16.4) in humans and 0.4% (95% CI = 0.0–2.9) in other animal species. The overall CCHFV past infections seroprevalence was 4.3% (95% CI = 3.3–5.4) in humans and 12.0% (95% CI = 9.9–14.3) in other animal species. CFR was higher in low-income countries, countries in the WHO African, South-East Asia and Eastern Mediterranean regions, in adult and ambulatory patients. CCHFV detection rate in humans were higher in CCHFV suspected cases, healthcare workers, adult and hospitalized patients, ticks of the genus Ornithodoros and Amblyomma and in animals of the orders Perissodactyla and Bucerotiformes. This review highlights a significant disease burden due to CCHFV with a strong disparity according to country income levels, geographic regions, various human categories and tick and other animal species. Preventive measures in the light of these findings are expected.

Author summary

Crimean-Congo hemorrhagic fever is one of the most severe zoonotic viral disease that occurs in humans. It is therefore necessary to provide public health stakeholders, research funding agencies and healthcare workers with accurate data on the burden of this disease in order to guide decision-making priorities. Our study is the first systematic review with meta-analysis to provide global data on CCHFV CFR in humans, CCHFV prevalence and seroprevalence in humans, ticks and other animal species. This review is also the first to maps CCHFV CRF, prevalence, and seroprevalence in humans, ticks and other animal species according to the country income level, geographic region, various human categories, and extensive tick and animal species. Broadly, the study showed elevated CFR in low-income countries, WHO regions of Africa, South-East Asia and Eastern Mediterranean, and adult and outpatient patients. In addition, the prevalence and seroprevalence of CCHFV were higher in CCHFV suspected cases, healthcare workers, adults and hospitalized patients, ticks of the genus Ornithodoros and Amblyomma, and animals of the orders Perissodactyla and Bucerotiformes. Finally, our findings show that more attention needs to be paid to low-income countries particularly in WHO regions of Africa, South-East Asia, and Eastern Mediterranean in order to prevent human deaths due to CCHFV. In particular low-income countries and adults should benefit from emergency measures aimed at improving the management of patients with CCHF and reducing exposure of humans and animals to ticks. This meta-analysis further shows that apart from the monitoring and control of CCHFV in humans, a special attention should also be given to role played by non-Hyalomma tick species and other animal species, both domestic and wild.

Introduction

Crimean-Congo Hemorrhagic Fever (CCHF) is one of the most severe zoonotic viral diseases that occur in humans. This disease characterized by fever and hemorrhage, often with nonspecific signs and symptoms with case fatality rates (CFR) ranging from 5–30% [1, 2]. The Crimean-Congo hemorrhagic fever virus (CCHFV) was first identified in the Crimean region of Russia in 1944 and was subsequently shown to be identical to the Congo virus identified in the Congo basin in 1967, giving the virus its current name [24]. This virus has been detected in more than 50 countries of Asia, Europe, and Africa where it is associated either to outbreaks of hemorrhagic fever or only sporadic cases [2]. The presence of the ticks, CCHFV, CCHF, and death due to CCHFV are increasing in endemic areas and also in new areas [5, 6]. This is due to various factors such as climate change, the increase in the tick number, the increasing exposure of animals and humans and the improvement of viral detection assays.

CCHF is a tick-borne disease caused by CCHFV belonging to the genus Orthonairovirus of the family Nairoviridae within the order Bunyavirales [7, 8]. CCHFV is maintained in nature through transmission by ticks of the family Ixodidae, and members of the genus Hyalomma are considered as the main vectors that spread the virus to humans and a variety of wild and domestic animals [9]. Both wild and domestic animals represent an important link in the disease transmission cycle, and play a key role in the amplification of the virus [10]. Animals may serve as asymptomatic reservoirs of CCHFV and their distribution to human cases appears to be closely related to vector distribution [2]. Humans are infected by tick bite, crushing it on an open wound, contact with blood, body fluids or tissues of a viremic animal or human, and possibly through sexual transmission [1, 11, 12]. Virus (re)emergence continue to be key topics of national and international health security and CCHF is classified by the World Health Organization (WHO) as a priority disease for research and development due to its potential to cause major epidemics in humans [13]. As other hemorrhagic fever viruses, appropriate knowledge about the CCHFV ecology, transmission dynamics, and competent reservoir hosts and vectors are required to anticipate the potential risk of outbreak and to better understand the disease burden of CCHF in diverse regions of the world. The surveillance of this CCHFV by assessing the status of CCHFV-specific antibodies in the animal and human populations and the presence of CCHFV in ticks are good indicators of the presence or absence of CCHFV in a given area [3, 14]. Moreover, these indicators are critical to assess the potential threat of CCHFV on human health in the epidemiological contexts that are considered.

Previous reviews and systematic reviews on CCHFV have focused on seroepidemiological studies in domestic and wild animals [10], CCHF related to travel [15], the role of vertebrate animals and ticks in CCHFV maintenance and amplification of the infection,[1, 9] and seroprevalence of CCHF in humans of the WHO European region [16]. Furthermore, Nasirian and collaborators recently performed 2 systematic reviews in the global context on the seroprevalence of CCHFV in humans and animals and the CCHFV CFR in humans [6, 17]. This systematic review with meta-analysis seeks to assess CCHFV prevalence and seroprevalence in wildlife, livestock, ticks and humans. This systematic review also provides overall data about the CCHFV CFR in various human categories. A summary of such a comprehensive and extensive literature review on CCHFV would serve as a basis to guide priorities in focusing prevention efforts according to the types of CCHFV host, different geographic areas and other multiple socio-demographic parameters.

Methods

Design and inclusion criteria

This systematic review and meta-analyses was performed following the guidelines of Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) [18] (S1 Table) and was registered to Prospero under the identification CRD42020167714. The methodology used for this review has been previously described [19]. Our inclusion criteria were observational or interventional studies published in peer-reviewed journals including case series, case-control, baseline data for cohort, cross-sectional studies, and epidemiological surveys. The studies included in this review provided cross-sectional data on the CFR or prevalence of one or more diagnostic targets of the CCHFV (live virus, viral antigen, viral RNA, IgM or IgG specific antibodies). We considered studies using any type of laboratory assay to find these specific CCHFV diagnostic targets in any type of sample. We classified the CCHFV infections as: acute infections (evidenced by the presence of live virus, viral antigen or RNA), recent infections (IgM) or past infections (antibody or IgG). We defined acute infection rates as "prevalence" and recent and past infection rates as "seroprevalence". We considered all studies worldwide without any geographic restriction. We considered studies in humans, ticks, and all other domestic and wild animals considered in included studies. We included studies testing CCHFV in individual or pooled ticks. For studies testing CCHFV in individual ticks we estimated the prevalence. For studies testing pooled ticks we collected the names of positive species and considered null prevalence for negative species. We grouped and calculated the CCHFV prevalence in ticks according to their genus [20]. We grouped and calculated the CCHFV prevalences in other animals according to their orders [21]. We considered the individual CCHFV prevalences in the articles according to the type of infections (acute, recent or past) and the category of the population. A single article could thus contribute for several prevalence records. When the same population represented several prevalence data for the same type of infection, we combined the prevalence for all detection assays used or chose the technique reporting the highest prevalence. Exclusion criteria were systematic reviews, case reports, reports, commentaries, duplicate studies, and articles written in any language ​​other than English or French.

Data sources and search strategy

We performed a comprehensive review of electronic bibliographic databases for publications from inception till February 03, 2020. The search strategy was implemented in Pubmed (S2 Table), Scopus, and Global Index Medicus databases. We also performed manual searches in the reference section of included articles as well as relevant previous reviews for additional inclusions.

Study selection, data extraction and assessment of study quality

All the articles identified were first reviewed based on the title and abstract by two authors (SK and JTEB), and afterwards they were reviewed based on the full text. Disagreement was resolved by discussion and consensus and if necessary, the opinion of a third reviewer was required. Data from the included studies was extracted using a Google form by 18 study authors. From the eligible articles, data extracted included: first author name, year of publication, period of study participant recruitment, study design, sampling method, timing of data collection, country, United Nations Statistics Division (UNSD) region [22], country income level [23], age range, mean or median age, male percentage, recruitment setting, hospitalization status, population category, tick genus, tick species identification approach, description of tick pooling approach, order of other animals, CCHF case definition, CCHF detection assay, CCHFV diagnostic target detected, type of infection (acute, recent or past infections), type of sample tested, the number of samples tested for CCHFV, the number of samples tested positive for CCHFV and the number of deaths among the CCHFV individuals. Data were also collected for the 10 questions for risk of bias assessment as previously described by hoy and colleagues (S3 Table) [24].

Statistical analysis

We performed a meta-analysis using a random effect model on the data collected in the included articles to determine the CFR of CCHFV in humans and the prevalence of CCHFV in humans, ticks and other animals [25, 26]. We performed a Chi-square test to estimate the heterogeneity of the studies [25, 27]. We also determined the value of I2 which represents the proportion of the variability that could be attributable to heterogeneity and not to sampling error. We used the Egger statistical test and the funnel plot to estimate publication bias [28]. We performed a subgroup analysis to investigate the qualitative variables likely to influence the prevalence of CCHFV for each population category represented by 3 or more studies. These variables included study design, sampling method, timing of data collection (retrospective/prospective), country, country level income, UNSD region, age range, recruitment context (rural/urban), hospitalization status and type of sample. To determine the potential sources of heterogeneity, we conducted a meta-regression including subgroup analysis variables and continuous variables (mean or median age and male percentage). We conducted sensitivity analyses including only studies with low risk of bias and cross-sectional studies. Analyses were performed using R software version 3.6.2 and p values ​​<0.05 were considered statistically significant [29, 30].

Results

Included studies search process

Our searches found 2345 records. We eliminated 600 duplicates and reviewed the titles and abstracts of 1,745 articles. The review of titles and abstracts eliminated 1,110 articles, reducing the number of articles requiring full-text review to 635. A total of 312 (802 prevalence and/or CFR data) articles were included in the qualitative and quantitative synthesis. Fig 1 and S4 Table illustrate the PRISMA flowchart and the specific reasons for excluding some articles after full text review.

Fig 1. Flowchart for study selection.

Fig 1

Assessment of study quality

None of the included studies had a high risk of bias (S5 Table). Overall (802 studies), the majority of studies were at moderate risk of bias, 680/802 (84.8%). A group of 15/802 (1.8%) studies were nationally representative, 156/802 (19.4%) had a randomized study participant recruitment, 150/802 (18.7%) reported a CCHF case definition, 17/802 (2.1%) had a participant response rate greater than 70% and 435/802 (54.2%) had a study period greater than 1 year. For studies in humans (323 studies), 203/323 (62.5%) had a moderate risk of bias, 12/323 (3.7%) studies were representative of the national population, 45/323 (13.8%) had a recruitment of randomized participants, 14/323 (4.3%) had a participant response rate greater than 70% and 178/323 (55.1%) had a study duration greater than 1 year. All studies in ticks (245) were at moderate risk of bias. Among individual ticks (209 studies), no study was representative of the national population, 73/209 (34.9%) had a randomized study participant recruitment, and 98/209 (46.8%) had a study duration greater than 1 year. For studies in pooled ticks (36 studies), none were representative of the national population, 2/36 (5.5%) had a randomized study participant recruitment, and 14/36 (38.8%) had a study duration greater than 1 year. Almost all the studies in other animals (234 studies) were at moderate risk of bias, 240/234 (99.1%). A group of 3/234 (1.2%) studies in other animals were representative of the national population, 39/234 (15.3%) had a randomised study participant recruitment and 145/234 (61.9%) had a study duration greater than 1 year.

Baseline characteristics of included studies

The majority of studies were conducted in humans (323 studies), followed by ticks (245 studies) and other animals (234 studies) (S6 and S7 Tables). The 802 studies reporting the prevalence and/or CFR of CCHFV were published between 1974 and 2020 with participants recruited between 1964 and 2018. All studies in ticks and other animals were cross-sectional. The majority of articles were non-probabilistic, prospective and community-based. A total of 158 studies were carried out in Turkey and 126 in Iran. The most represented UNSD regions were West Asia (225 studies) and South Asia (210 studies). Most of the studies were conducted in upper-middle-income countries (433 studies). Only 6 studies in individually tested ticks carried out their taxonomic assignment based on tick DNA sequence analyses. Ticks from the genus Hyalomma (104 studies) and Rhipicephalus (51 studies) were predominantly represented including the species Hyalomma marginatum (22 studies) and Rhipicephalus sanguineus (18 studies). Other animal species studied to date belong to more than 20 orders (more than 80 species). Animals of the order Artiodactyla were largely represented with, 157 studies, including 48 studies in sheep and 35 in goats. The studies in humans recruited mostly CCHFV suspected cases (120 studies) and febrile patients (46 studies). Thirty-six studies reported CCHFV positive tick species when determining CCHFV prevalence by pooled analyses. The predominant detection assays used to detect CCHFV in the included studies were indirect ELISA (277 studies) and conventional RT-PCR (181 studies). The majority of studies found target of past CCHFV infections evidenced by the detection of IgG antibodies (367 studies), and acute infections evidenced by the detection of viral antigen, viral RNA or live virus (367 studies). All studies in ticks involved only CCHFV acute infection. With respect to studies among humans and other animals, most of them (540 studies) found CCHFV in serum specimens.

Results of the meta-analysis

The majority of studies on the CCHFV CFR were conducted in Turkey (35/53; 66.0%). The overall CCHFV CFR recorded in 8096 humans with acute infections recruited from 41 articles (45 reported CFR data) was 11.7% [95% CI = 9.1–14.5] (Figs 2 and S1, and S1 Text). The overall CCHFV CFR recorded in 179 humans with recent infections recruited from 6 articles (6 reported CFR data) was 8.0% [95% CI = 1.0–18.9]. The overall CCHFV CFR recorded 41 humans with past infections recruited from 2 articles (2 reported CFR data) was 4.7% [95% CI = 0.0–37.6].

Fig 2. Global case fatality rate estimate of Crimean-Congo hemorrhagic fever virus infections in humans.

Fig 2

The overall prevalence of CCHFV recorded in 35,198 human participants with acute infections recruited from 62 articles (67 reported prevalence data) was 22.5% [95% CI = 15.7–30.1] (Figs 3 and S2, and S2 Text). The overall seroprevalence of CCHFV recorded in 27,173 human participants with recent infections recruited from 54 articles (56 reported seroprevalence data) was 11.6% [95% CI = 7.6–16.4]. The overall seroprevalence of CCHFV recorded in 74,900 human participants with past infections recruited from 125 articles (147 reported seroprevalence data) was 4.3% [95% CI = 3.3–5.4].

Fig 3. Global prevalence estimate of Crimean-Congo hemorrhagic fever virus infections in humans, ticks, and other animals species.

Fig 3

All of the tick studies registered acute CCHFV infection. The overall prevalence of CCHFV recorded in 31,117 ticks tested individually or grouped (those with null prevalence) in 71 articles (209 prevalence data) was 2.1% [95% CI = 1.3–2.9] (Figs 3 and S3, and S3 Text).

The overall prevalence of CCHFV recorded in 810 other animal species with acute infections in 6 articles (10 prevalence data) was 4.5% [95% CI = 1.9–7.9] (Figs 3 and S4, and S4 Text). The overall seroprevalence of CCHFV recorded in 1,627 other animal species with recent infections in 4 articles (6 seroprevalence data) was 0.4% [95% CI = 0.0–2.9]. The overall seroprevalence of CCHFV recorded in 92,058 other animal species with past infections in 77 articles (218 prevalence data) was 12.0% [95% CI = 9.9–14.3].

In the sensitivity analysis, most of the overall results were similar to the results of cross-sectional studies and those with low risk of bias (Table 1). Compared to the overall results, the CCHFV CFR was very high in studies with low risk of bias in patients with recent and past infection. Compared to the overall results, the prevalence of CCHFV was high in studies with a low risk of bias in patients with recent infection. The overall results showed substantial heterogeneity for CCHFV CFR and CCHFV prevalence in humans, ticks, and other animal species (Figs 2 and 3). Egger’s test and funnel plot was performed to identify publication bias. The funnel plots indicate good symmetry for determining the CFR and CCHFV prevalence in other animals (S5S14 Figs). Egger’s test indicates a significant publication bias for the determination of the CFR, CCHFV prevalence in humans, ticks, and other animal species with past infections (Table 1).

Table 1. Summary of meta-analysis results for global prevalence of Crimean-Congo Hemorrhagic Fever Virus in humans, ticks, and other animal species.

Prevalence. % (95%CI) 95% Prediction interval N Studies N Participants H (95%CI) §I2 (95%CI) P heterogeneity P Egger test
CCHFV case fatality rate in humans
Acute infection
Overall 11.7 [9.1–14.6] [0.4–32.5] 45 8096 3.3 [3–3.7] 90.9 [88.7–92.7] < 0.001 0.031
Cross-sectional 11 [8.3–14] [0.2–31.6] 39 7747 3.5 [3.1–3.9] 91.6 [89.5–93.3] < 0.001 0.086
Low risk of bias 13.1 [8.9–18.1] [0–41.3] 25 4912 4 [3.5–4.5] 93.7 [91.8–95.2] < 0.001 0.098
Recent infection
Overall 8 [1–18] [0–50.5] 6 179 1.9 [1.2–2.9] 71.8 [34.7–87.8] 0.003 0.001
Cross-sectional 8 [1–18] [0–50.5] 6 179 1.9 [1.2–2.9] 71.8 [34.7–87.8] 0.003 0.001
Low risk of bias 16 [0.9–40.5] [0–100] 4 86 2.1 [1.3–3.5] 78.1 [40.9–91.9] 0.003 0.032
Past infection
Overall 4.7 [0–37.7] NA 2 41 2.3 [1.1–4.7] 80.8 [17.7–95.5] 0.023 NA
Cross-sectional 4.7 [0–37.7] NA 2 41 2.3 [1.1–4.7] 80.8 [17.7–95.5] 0.023 NA
Low risk of bias 20 [0.5–51.3] NA 1 10 NA NA 1 NA
CCHFV prevalence in humans
Acute infection
Overall 22.5 [15.8–30.1] [0–87] 67 35198 14.4 [13.9–14.9] 99.5 [99.5–99.5] < 0.001 0.001
Cross-sectional 22.1 [15–30.1] [0–87] 59 34724 15.3 [14.8–15.8] 99.6 [99.5–99.6] < 0.001 0.001
Low risk of bias 20.9 [11.6–31.8] [0–84.9] 28 26284 17 [16.2–17.8] 99.7 [99.6–99.7] < 0.001 0.006
Recent infection
Overall 11.7 [7.6–16.4] [0–56.9] 56 27173 9.3 [8.9–9.8] 98.8 [98.7–99] < 0.001 < 0.001
Cross-sectional 12 [7.6–17.1] [0–57.8] 48 26658 10 [9.5–10.5] 99 [98.9–99.1] < 0.001 < 0.001
Low risk of bias 19.7 [10–31.4] [0–78.3] 18 18276 12 [11.1–13] 99.3 [99.2–99.4] < 0.001 0.001
Past infection
Overall 4.3 [3.3–5.4] [0–23.3] 147 74900 6.6 [6.3–6.8] 97.7 [97.5–97.9] < 0.001 0.012
Cross-sectional 4.2 [3.2–5.3] [0–22.9] 135 73576 6.8 [6.5–7] 97.8 [97.6–98] < 0.001 0.018
Low risk of bias 4.4 [2.7–6.5] [0–23.6] 44 21917 6.3 [5.8–6.7] 97.5 [97.1–97.8] < 0.001 0.717
CCHFV prevalence in ticks
Acute exposure
Overall 2.1 [1.3–3] [0–21.4] 209 31117 3.9 [3.7–4] 93.3 [92.7–93.9] < 0.001 0.087
Cross-sectional 2.1 [1.3–3] [0–21.4] 209 31117 3.9 [3.7–4] 93.3 [92.7–93.9] < 0.001 0.087
CCHFV prevalence in other animal species
Acute infection
Overall 4.6 [1.9–7.9] [0–16.3] 10 810 1.6 [1.1–2.3] 61.6 [23.5–80.7] 0.005 0.854
Cross-sectional 4.6 [1.9–7.9] [0–16.3] 10 810 1.6 [1.1–2.3] 61.6 [23.5–80.7] 0.005 0.854
Recent infection
Overall 0.4 [0–2.9] [0–13.5] 6 1627 2.3 [1.6–3.4] 81.6 [60.6–91.4] < 0.001 0.091
Cross-sectional 0.4 [0–2.9] [0–13.5] 6 1627 2.3 [1.6–3.4] 81.6 [60.6–91.4] < 0.001 0.091
Past infection
Overall 12.1 [9.9–14.4] [0–54.8] 218 92058 9.6 [9.4–9.9] 98.9 [98.9–99] < 0.001 0.001
Cross-sectional 12.1 [9.9–14.4] [0–54.8] 218 92058 9.6 [9.4–9.9] 98.9 [98.9–99] < 0.001 0.001
Low risk of bias 8 [4.2–12.9] NA 2 1818 3.5 [1.9–6.5] 91.8 [71.5–97.6] < 0.001 NA

CI: confidence interval; N: Number; 95% CI: 95% Confidence Interval; NA: not applicable.

¶H is a measure of the extent of heterogeneity, a value of H = 1 indicates homogeneity of effects and a value of H >1indicates a potential heterogeneity of effects.

§: I2 describes the proportion of total variation in study estimates that is due to heterogeneity, a value > 50% indicates presence of heterogeneity

Subgroup analysis

The CCHFV CFR in humans and CCHFV prevalences observed in humans, ticks, and other animals varied widely in different regions of the world (Fig 4).

Fig 4. Global case fatality rate, prevalence, and seroprevalence estimate of Crimean-Congo hemorrhagic fever virus in humans, ticks, and other animal species.

Fig 4

The letters (a, b, c, and d), (e, f, and g) and (h, I, and g) denote acute, recent and past CCHFV exposures, respectively. The letters (a, e, and h) shows the case fatality rate in humans. The letters (b, f, and, i), (c, g, and j) and (d) present the CCHFV detection rates in humans, other animal species and ticks, respectively. Map source: https://www.datawrapper.de/.

The subgroup analysis based on the qualitative variables collected is presented in S8 Table. Analysis of the data showed that CCHFV CFR were mostly reported among CCHFV suspected cases (42 studies). The pooled CFR among individuals experiencing acute CCHFV infection ranged from 30.0% [95% CI = 4.9–62.5] in patients with bleeding symptoms to 11.4% [95% CI = 8.8–14.3] in CCHFV suspected cases. The highest CFR of CCHFV acute infection in humans was recorded in probabilistic studies (p = 0.001), low-income countries (p <0.001), countries in the WHO region of Africa and South-East Asia (p <0.001), in adults (p < 0.001), and in ambulatory patients (p <0.001). The pooled CFR in recent infection ranged from 20.0% [95% CI = 0.5–51.3] in patients with bleeding symptoms to 1.9% [95% CI = 0.0–8.0] in febrile patients. The highest CFR from CCHFV recent infection in in humans was recorded in retrospective studies (p <0.001) and countries in the WHO region of Eastern Mediterranean (p <0.001). The CFR in past infection ranged from 20.0% [95% CI = 0.5–51.3] in patients with bleeding symptoms to 0.0% [95% CI = 0.0–5.4] in CCHFV suspected cases.

Data analysis showed that the prevalence of CCHFV was mostly reported in CCHFV suspected cases (70 studies) with acute and recent CCHFV infections as well as among apparently healthy individuals with past CCHFV infection (61 studies). The pooled prevalence of CCHFV among individuals experiencing acute infection ranged from 49.0% [95% CI = 35.3–62.8] in healthcare workers to 1.9% [95% CI = 0.4–4.2] in febrile patients. The highest prevalence of CCHFV acute infection in humans was recorded in hospital outbreaks (p <0.001), non-probabilistic studies (p < 0.001), retrospective studies (p = 0.019), upper-middle-income economies (p < 0.001), countries in the WHO region of Europe (p <0.001), and in healthcare workers and CCHFV suspected cases (p <0.001). The pooled seroprevalence of CCHFV in recent infection ranged from 31.7% [95% CI = 21.7–42.7] in CCHFV suspected cases to 0.0% [95% CI = 0.0–0.3] in healthcare workers. The highest seroprevalence of CCHFV recent infection in humans was recorded in hospital outbreaks (p <0.001), non-probabilistic studies (p < 0.001), high-income countries (p = 0.003), countries in the WHO region of Europe and Eastern Mediterranean (p <0.001), in hospitalised patients (p <0.001), and in CCHFV suspected cases (p <0.001). The pooled seroprevalence of CCHFV in past infection ranged from 30.5% [95% CI = 22.8–38.8] in CCHFV suspected cases to 0.7% [95% CI = 0.0–1.7] in healthcare workers. The highest seroprevalence of CCHFV past infection in humans was recorded in cohort and case control studies (p < 0.001), retrospective studies (p = 0.021), upper-middle-income and high-income countries (p < 0.001), countries in the WHO region of Europe and Eastern Mediterranean (p <0.001), adults (p = 0.049), hospitalised patients (p = 0.026), and in CCHFV suspected cases (p <0.001).

In this review, CCHFV was detected in over 35 different tick species belonging to the genus: Hyalomma, Rhipicephalus, Haemaphysalis, Dermacentor, Ixodes, Amblyomma, and Ornithodoros. Data analysis showed that the prevalence of CCHFV was mostly reported in ticks of the genus Hyalomma (106 studies) and the genus Rhipicephalus (52 studies). Among ticks for which genus classification was possible, the pooled prevalence of CCHFV varied from 11.4% [95% CI = 0.0–63.5] in Ornithodoros to 0.0% [95% CI = 0.0–3.2] in Argas. Thirty-six studies reported positive species in pooled tested ticks. These positive species in pooled tested ticks included those of the genera Amblyomma, Dermacentor, Haemaphysalis, Hyalomma, Ixodes and Rhipicephalus. The highest prevalence of CCHFV acute infection among ticks was recorded in probabilistic studies (p = 0.008), countries in the WHO region of Eastern Mediterranean and Africa (p <0.001), and genus Ornithodoros and Amblyomma (p < 0.001).

Analysis of the data showed that the prevalence of CCHFV was mostly reported in cases of CCHFV past infection (20/23 orders). The majority of studies was based on the order Artiodactyla (162 studies). The pooled prevalence of CCHFV in acute infection was 6.5% [95% CI = 0.0–51.0] in Rodentia and 5.3% [95% CI = 3.4–7.4] in Artiodactyla. The highest seroprevalence of CCHFV acute infection in other animal species was recorded in prospective studies (p = 0.001), and countries in the WHO region of Africa (p = 0.004). The pooled prevalence of CCHFV in recent infection was reported only in Artiodactyla, 0.4% [95% CI = 0.0–2.9]. The greatest pooled seroprevalence of CCHFV in past infection was 35.6% [95% CI = 10.5–65.7] in Perissodactyla. The orders Anseriformes, Apodiformes, Columbiformes, Eulipotyphla, Gruiformes, Hyracoidea, Macroscelidea, Pelecaniformes, and Primates showed no evidence of CCHFV past infection. The highest seroprevalence of CCHFV past infection in other animal species was recorded in low-income and upper-middle-income countries (p <0.001), countries in the WHO region of Western Pacific (p <0.001), and in the orders of Perissodactyla and Bucerotiformes (p < 0.001).

The sources of heterogeneity were explored using univariate and multivariate metaregression and the results are shown in S9 Table. Heterogeneity in the estimate of the CFR in humans was explained at 78.0% for acute infections. The heterogeneity in the estimate of CCHFV prevalence in humans was explained at 43.9% for acute infections, 35.6% for recent infections, and 16.4% for past infections. The heterogeneity in the estimate of CCHFV prevalence in ticks was explained at 8.8% for acute infections. The heterogeneity in the estimate of CCHFV prevalence in other animal species was explained at 66.8% and 0.0% for acute and past infections respectively.

Discussion

This study provides a summary of epidemiological data of Crimean Congo hemorrhagic fever, in humans, ticks and other animal species derived from articles published from 1974 to 2020 with studied participants recruited from 1964 to 2018. This study revealed a wide range of host species for CCHFV in ticks and other animal species. Globally, for acute infections, we estimated the CCHFV CFR of 11.7% in humans and a CCHFV prevalence of 22.5%, 4.5% and 2.1% in humans, ticks, and other animal species, respectively. For recent infections, we estimated the CCHFV CFR of 8.0% in humans and a CCHFV seroprevalence of 11.6% and 0.4% in humans and other animal species, respectively. For past infections, we estimated the CCHFV CFR of 4.7% in humans and a CCHFV seroprevalence of 4.3% and 12.0% in humans and other animal species, respectively. Highest CFR were recorded in low-income countries, Africa, South-East Asia, Eastern Mediterranean, adults, and ambulatory patients. The CCHFV prevalences were higher among healthcare workers, CCHFV suspected cases, hospitalised patients, adults, Europe, Eastern Mediterranean, upper-middle-income and high-income countries, and during hospital outbreaks. The CCHFV prevalences among ticks were higher in the genus Ornithodoros and Amblyomma and Eastern Mediterranean and Africa regions. The CCHFV prevalences in other animal species were higher in animals of the orders Perissodactyla and Bucerotiformes, Africa, Western Pacific, and low-income and upper-middle-income countries.

A study in pregnant women with CCHF from Russia, Kazakhstan and Turkey reported a case fatality rate of 34% among pregnant women and 58.5% stillbirth [31]. Another recent review by Nasirian reported an overall mean of fatality rate of 32.2% [6]. Although there is no approved antiviral for CCHFV, CCHF patient management is mainly based on supportive treatment including blood administration and providing intensive care for cases developing organ failure. Moreover, the ribavirin is encouraged in post-exposure for medical professionals [32], to prevent secondary infection or in the early stage of infection in order to reduce mortality [32, 33]. Low-income countries are known to have limited healthcare access including the above CCHF palliative CCHF case management measures [34]. This would therefore be one of the main explanatory reasons for the high case fatality rate recorded during this review in low-income countries, especially countries in the African, South-East Asian, and Eastern Mediterranean WHO regions.

In this review, high prevalences of CCHFV in humans were noted in upper-middle-income and high-income countries. Interpretation of this result should be made with caution as low-income countries have poor access to diagnosis and therefore may have and underestimated CCHFV positive numbers [34]. CCHFV geographic distribution correlates with the global distribution of the ticks which serve as vector/reservoir and are considered as crucial in maintaining endemic foci [1, 3, 9]. Although ticks of the genus Hyalomma are recognized as the main CCHFV vector/reservoir [9], we recorded the highest CCHFV prevalences in this review in ticks of the genus Ornithodoros and Amblyomma and in the WHO African and West Mediterranean regions. This relatively high rate of CCHFV in these tick genus suggests that more consideration should be made in these ticks because they can potentially provide a persistent virus reservoir due to their long life-span. Furthermore, the role of tick species other than Hyalomma is not fully understood and does need further investigation. Ticks are able to feed on various migratory birds, domestic and wild animals and play an essential role in a silent enzootic CCHFV circulation [3]. Thus, seroepidemiological studies in animals are suitable indicator to define risk area for human infections. During this review, we obtained a CCHFV pooled seroprevalence of 12.0% in animals with past infections. The data of this study show a remarkable wide range of host species of the CCHFV among animals with at least 10 animal orders and suggest that apart from small ruminants, attention should also be paid to other animal species. Investigation should be focused on animals capable of migrating, such as bats and birds, which may be infected or carry infected ticks [3, 4, 10, 35].

This study shows that the majority of studies on the CCHFV CFR and associated factors was conducted in Turkey followed by Iran, Afghanistan, Pakistan, India. It is therefore urgent to conduct more studies to estimate the CCHFV CFR and the associated factors in other regions and more particularly in low-resource settings where the burden is greater. No approved vaccine is currently available to prevent CCHFV infections. Funding agencies and public health authorities should continue to promote vaccine development programs in humans, ticks, and other animal species. Reducing human and animal exposure to ticks would be of critical importance in reducing CCHFV transmission. This could be done through the use of acaricides or the sanitation of livestock areas. Raising people’s awareness of the modes of transmission and ways to prevent exposure to CCHFV would be another useful way to reduce infections. Hand hygiene and the use of personal protective equipment by healthcare workers, and more particularly during hospital outbreaks, would be effective in reducing nosocomial transmission of CCHFV. Handling of specimens from suspected CCHF cases should be carried out in specialized laboratories and by trained personnel. The prevention would also require the use of adequate protective equipment in livestock facilities, slaughterhouses, and places where animals are marketed. To expect a substantial reduction in mortality from CCHFV the application of the above measures should place special emphasis on resource-limited settings, adult, and outpatient CCHF suspected cases. Further studies on humans, ticks and animals of other species are crucial to identify new areas at risk, to monitor the spread of the virus and to ensure an adequate level of preparedness.

Although we intended to investigate most of the sources of heterogeneity in this meta-analysis, the results remain affected by a substantial unexplained residue of heterogeneity. Due to the divergent nature of the data reported in the included studies, we have incompletely explored major sources of heterogeneity such as diagnostic assays, positivity thresholds of detection assays, animal species and population categories recruited. Pooled tick analyses in some studies also compromised the ability to estimate prevalences for those studies, and could influence the estimate for ticks in this study. Another pitfall of this work is the consideration for inclusion of only article written in English or French. A search for studies in the language other than English and French in the 3 databases consulted resulted in about 200 studies to be screened for titles, abstracts and full texts for potential inclusion.

Conclusions

Overall, our analyses revealed the presence of CCHFV worldwide in multiple human categories and a wide range of tick and animal species. This review also reveals a great variability in the CFR, prevalence and seroprevalence of CCHFV according to geographic regions, different human categories, tick species, and domestic and wild animals. These findings are important in guiding preventive actions against CCHFV.

Supporting information

S1 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global case fatality rate estimate in humans.

(PDF)

S2 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global prevalence in humans.

(PDF)

S3 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global prevalence in ticks.

(PDF)

S4 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global prevalence in other animal species.

(PDF)

S1 Table. Preferred reporting items for systematic reviews and meta-analyses checklist.

(PDF)

S2 Table. Search strategy in Medline (Pubmed).

(PDF)

S3 Table. Items for risk of bias assessment.

(PDF)

S4 Table. Main reasons of exclusion of eligible studies.

(PDF)

S5 Table. Risk of bias assessment.

(PDF)

S6 Table. Characteristics of included studies.

(PDF)

S7 Table. Individual characteristics of included studies.

(PDF)

S8 Table. Subgroup analyses of worldwide case fatality rate and prevalence of Crimean-congo hemorrhagic fever virus in humans, ticks, and other animals.

(PDF)

S9 Table. Univariable and multivariable meta-regression analysis on the human case fatality rate and prevalence of CCHFV in humans, ticks, and other animal species.

(PDF)

S1 Fig. Global case fatality rate estimate of Crimean-Congo hemorrhagic fever virus acute, recent and past infections in humans.

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S2 Fig. Global prevalence estimate of Crimean-Congo hemorrhagic fever virus acute, recent and past infections in humans.

(PDF)

S3 Fig. Global prevalence of Crimean-congo hemorrhagic fever virus infections in ticks.

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S4 Fig. Global prevalence estimate of Crimean-Congo hemorrhagic fever virus acute, recent and past exposure in other animal species.

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S5 Fig. Funnel plot for publication for global case fatality rate of Crimean-congo hemorrhagic fever virus in humans with acute infections.

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S6 Fig. Funnel plot for publication for global case fatality rate of Crimean-congo hemorrhagic fever virus in humans with recent infection.

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S7 Fig. Funnel plot for publication for global case fatality rate of Crimean-congo hemorrhagic fever virus in humans with past infection.

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S8 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus prevalence in Humans with acute infections.

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S9 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus prevalence in Humans with recent infections.

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S10 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus prevalence in Humans with past infections.

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S11 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in ticks.

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S12 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in other animals with acute infections.

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S13 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in other animals recent infections.

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S14 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in other animals with past infections.

(PDF)

Data Availability

All relevant data are within the manuscript and its Supporting Information files.

Funding Statement

The author(s) received no specific funding for this work.

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PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0009299.r001

Decision Letter 0

Michael R Holbrook, Jeremy Camp

20 Dec 2020

Dear PhD Njouom,

Thank you very much for submitting your manuscript "Worldwide epidemiology of Crimean-Congo Hemorrhagic Fever Virus in humans, ticks and other animal species, a systematic review and meta-analysis." for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments.

Reviewers provided a range of opinions regarding your submission. Please consider making significant revisions to your document to address these concerns. The authors are also encouraged to move some of their smaller figures and tables to the main text where they could provide additional value and clarity to the manuscript. In addition, careful copy-editing must be performed as the PLoS editorial team does not edit manuscripts.

We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

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Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts.

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Sincerely,

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Associate Editor

PLOS Neglected Tropical Diseases

Jeremy Camp, PhD

Deputy Editor

PLOS Neglected Tropical Diseases

***********************

Reviewers provided a range of opinions regarding your submission. Please consider making significant revisions to your document to address these concerns. The authors are also encouraged to move some of their smaller figures and tables to the main text where they could provide additional value and clarity to the manuscript. In addition, careful copy-editing must be performed as the PLoS editorial team does not edit manuscripts.

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #1: -Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

In my view, the research question of the study, “to assess CCHFV worldwide prevalence and seroprevalence in wildlife, livestock, ticks and humans” makes no sense. Various factors have an impact on the incidence of CCHF in different regions. These factors may vary considerably from region to region. This is not sufficiently reflected in the presented research.

-Is the study design appropriate to address the stated objectives?

No, because the objective is not meaningful.

-Is the population clearly described and appropriate for the hypothesis being tested?

Not applicable

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

Not applicable

-Were correct statistical analysis used to support conclusions?

The methodology is not always transparent (e.g. the start date of the search: Methods: No date mentioned; Discussion (line 364: “articles published from 1974”; the screening procedure [e. g. lines 135-136: “All the articles identified were first reviewed based on the title and abstract …, and afterwards they were reviewed base on the full text; lines 171-172 suggests that articles were excluded after reading titles and abstracts; “metaregression” (line 162) and “sensitivity analyses” are mentioned, but not described in sufficient detail).

-Are there concerns about ethical or regulatory requirements being met?

No

Reviewer #2: Very well thought out.

Reviewer #3: The manucript is a systematic review and meta-analysis on Crimean-Congo hemorrhagic fever virus (CCHFV), with emphasis on global epidemiology. The search and evaluation methods are valid and well-explained.

However, the manuscript definitely requires major edits in form, that are explained below:

- The claims of originality indicated in several statements is unnecessary and do not reflect the content. The authors seem to emphasize case fatality rate for this purpose in many instances in the text, summary, keywords etc., to set this effort apart from other recent reviews on CCHFV (please consider how contradictory the statement in the the very first lines of the introduction (line 55) appears in this regard). Comparison of prevalence rates in previous meta-analyses (as observed in Discussion) is also unnecassary and can be due to differences in methodology.

- In the text, many statements suffer from awkward phrasing with occasional grammatical errors. A language review by a native speaker is required.

- Table 1 is hard to follow and is unlikely to fit in a print format.

- Although obviously cited in this format, the references are practically too many. This reviewer wonders whether it is possible to transfer the references to a supplement format. The citations in the text (such as in lines 244-245, 250-251) are impossible to follow.

- Figures 2 and 3 are hard to follow, maybe due to the text format in the document without titles. The figures except for Fig.1 are practically tables and can be organized as such.

- The format in Fig.6 also prevents understanding of the color-based differences in prevalence etc.

- There are also occational typing errors (Line 148: “Hoy et al.”; line 162: “meta-regression”), which are minor considering the issues outlined above.

--------------------

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #1: -Does the analysis presented match the analysis plan?

Yes

-Are the results clearly and completely presented?

Yes.

-Are the figures (Tables, Images) of sufficient quality for clarity?

Yes.

Reviewer #2: Yes

Reviewer #3: Results are relatively hard to follow due to the problems outlined above.

--------------------

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #1: -Are the conclusions supported by the data presented?

No

-Are the limitations of analysis clearly described?

No, a critical appraisal of the chosen methods is missing.

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

No, not sufficiently.

-Is public health relevance addressed?

No, not sufficiently.

Reviewer #2: Yes

Reviewer #3: (No Response)

--------------------

Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #1: (No Response)

Reviewer #2: (No Response)

Reviewer #3: (No Response)

--------------------

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #1: (No Response)

Reviewer #2: The article by Thierry et al. describes a very thorough analysis on data from peer-reviewed papers on various aspects of CCHF/CCHFV biology. It is extremely well written and the results improve the fields clarity on these subjects. I have only minor suggestions:

1 Line 57: It s incorrect to state that CCFV circulates worldwide. As far as I can tell, and judging by the maps presented, it is not in the New World. Please re-word.

2. Line 91: Same as above

In assessment of study quality, please specify the total number of papers for each section (for example see line 182). Add the n size for papers looking at individual ticks, pooled ticks and other animals

3 Can the authors add a table listing "other" animals studied to date and a part of this analysis

Reviewer #3: In conclusion, although appears to be a result of significant work and has much to say, the manuscript in its current form is lacking the organization and impact expected from such a work. Considering that the required edits, only basically outlined in this review will practically result in entire rewriting, I recommend a new submission and will be available for review. However, major editing with correction of the above-mentioned issues is also acceptable, leaving the final decision to the editor.

--------------------

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Reviewer #1: No

Reviewer #2: No

Reviewer #3: No

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PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0009299.r003

Decision Letter 1

Michael R Holbrook, Jeremy Camp

15 Feb 2021

Dear PhD Njouom,

Thank you very much for submitting your manuscript "Worldwide epidemiology of Crimean-Congo Hemorrhagic Fever Virus in humans, ticks and other animal species, a systematic review and meta-analysis." for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. The reviewers appreciated the attention to an important topic. Based on the reviews, we are likely to accept this manuscript for publication, providing that you modify the manuscript according to the review recommendations.

Please prepare and submit your revised manuscript within 30 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to all review comments, and a description of the changes you have made in the manuscript.

Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Thank you again for your submission to our journal. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Michael R Holbrook, PhD

Associate Editor

PLOS Neglected Tropical Diseases

Jeremy Camp

Deputy Editor

PLOS Neglected Tropical Diseases

***********************

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #2: (No Response)

Reviewer #4: This systematic review of CCHFV prevalence/seroprevalence sets itself apart from others by focussing on four categories: wildlife, livestock, ticks, and humans. The study design follows PRISMA guidelines and has been used in other published studies, with inclusion criteria clearly laid out. The quantitative (and some qualitative) methodologies are appropriate for this type of meta-analysis, with due consideration of potential sources of bias.

Minor comment: I understand the need to filter out articles written in any language other than English or French for translation purposes, but it would be useful to know if this constituted a large or small number of articles. How many were in other languages?

Reviewer #5: the methodology is adequately described

--------------------

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #2: (No Response)

Reviewer #4: 312 studies ultimately contributed to 802 sources of data in the four categories of interest (wildlife, livestock, ticks, humans). Table 1 is well-presented and shows the summary of meta-analysis results. It may be helpful to have an additional table before this one which summarizes the baseline characteristics, which are currently only laid out in the text. Some of the maps in Figure 4 are not given detailed enough titles. This could be helped with labels for each map (a, b, c, etc.), alongside a more details caption for the figure which lays out exactly what each map shows.

Reviewer #5: The results are comprehensively presented

--------------------

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #2: (No Response)

Reviewer #4: The conclusions are well supported by the results presented, with limitations and public health implications explicitly addressed, at least in a general sense. It would be helpful to have specific public health implications laid out by world region, according to the geographic variation seen in the maps in Figure 4.

The authors note that caution should be given to the finding that high prevalence of CCHFV were not noted in low-income countries due to poor access to diagnostic resources. Are there any further analyses that may be done that might be able to model/quantify this discrepancy and perhaps estimate the degree of underreporting based on diagnostic capacity? A discussion around this point would be helpful and perhaps guide future studies.

Reviewer #5: The authors need to provide further discussion to clarify some of their findings. (see general comments below)

--------------------

Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #2: (No Response)

Reviewer #4: Minor comment: no need to capitalise “Domestic and Wild Animals” (line 87)

Reviewer #5: The use of English could be improved.

--------------------

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #2: The authors have adequately addressed my suggestions.

Reviewer #4: Overall, this is a very clearly written and thoughtful review/meta-analysis which creates further knowledge about global variations in CCHFV prevalence and seroprevalence in multiple hosts/vectors.

Reviewer #5: The authors have submitted a comprehensive meta analysis and systematic review of CCHF literature on the epidemiology of CCHFV in human, tick and other animals. The methodology is clearly described but there are some areas that the authors may want to provide clarification for the reader.

1.perhaps the authors could consider replacing "ongoing" with "acute". Acute infections is more commonly used to describe CCHFV infections detected using virus, antigen RNA etc

2.line 244, perhaps define what is included in sero-prevalence, eg did you take data from articles describing IgG, IgM and/or both IgG and IgM?

3. In line 218 the authors indicate that studies mostly included suspected cases and febrile patients, based on this comment, do the participant numbers described in the results include suspected and confirmed cases, for example the overall sero-prevalence in 74 900 participants with past infections was 4.3%? perhaps this could be clarified for all the results provided for humans and other animals.

4. line 246, is this seroprevalence you refer to?

5. The analysis of tick data showed prevalence was mostly reported in Hyalomma and Rhipicephalus however in line 325 the authors refer to results from pooled prevalence and comment that the highest prevalence was recorded in the genera Ornithodoros and Amblyomma. this was also highlighted in the abstract and author summary. although CCHFV has been isolated from more than 30 species, the role of tick species other than Hyalomma is not fully understood and does need confirmation. these results need to be discussed further (line 395) and clarified in the context of the current knowledge of known vector species to prevent misinterpretation.

Overall the authors have submitted a comprehensive and useful review that will be strengthened by additional discussion in the context of current knowledge on CCHF.

--------------------

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If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #2: No

Reviewer #4: No

Reviewer #5: No

Figure Files:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org.

Data Requirements:

Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5.

Reproducibility:

To enhance the reproducibility of your results, PLOS recommends that you deposit laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see http://journals.plos.org/plosntds/s/submission-guidelines#loc-materials-and-methods

References

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript.

PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0009299.r005

Decision Letter 2

Michael R Holbrook, Jeremy Camp

8 Mar 2021

Dear PhD Njouom,

We are pleased to inform you that your manuscript 'Worldwide epidemiology of Crimean-Congo Hemorrhagic Fever Virus in humans, ticks and other animal species, a systematic review and meta-analysis.' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases.

Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests.

The authors have adequately addressed reviewer concerns. However, it is recommended that the authors carefully proof their manuscript when it is returned as there are some typos throughout and PLoS staff do not copy-edit. Most importantly, please ensure that all Genera and Families are appropriately italicized. In several instances they are not. Note that there are differences in typography of taxonomic names between the ICZN and the ICTV (taxa higher than genus need not be italicized for zoological names whereas all virological taxa should be italicized). Also:

Line 54: should be "to the"

Line 287: There are two "."

Line 389: small "i"

Line 437: should be "genera" not "genus"

Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated.

IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript.

Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS.

Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Michael R Holbrook, PhD

Associate Editor

PLOS Neglected Tropical Diseases

Jeremy Camp

Deputy Editor

PLOS Neglected Tropical Diseases

***********************************************************

PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0009299.r006

Acceptance letter

Michael R Holbrook, Jeremy Camp

15 Apr 2021

Dear PhD Njouom,

We are delighted to inform you that your manuscript, "Worldwide epidemiology of Crimean-Congo Hemorrhagic Fever Virus in humans, ticks and other animal species, a systematic review and meta-analysis.," has been formally accepted for publication in PLOS Neglected Tropical Diseases.

We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication.

The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any scientific or type-setting errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Note: Proofs for Front Matter articles (Editorial, Viewpoint, Symposium, Review, etc...) are generated on a different schedule and may not be made available as quickly.

Soon after your final files are uploaded, the early version of your manuscript will be published online unless you opted out of this process. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers.

Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Shaden Kamhawi

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Paul Brindley

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global case fatality rate estimate in humans.

    (PDF)

    S2 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global prevalence in humans.

    (PDF)

    S3 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global prevalence in ticks.

    (PDF)

    S4 Text. Reference list of studies on Crimean-Congo hemorrhagic fever virus global prevalence in other animal species.

    (PDF)

    S1 Table. Preferred reporting items for systematic reviews and meta-analyses checklist.

    (PDF)

    S2 Table. Search strategy in Medline (Pubmed).

    (PDF)

    S3 Table. Items for risk of bias assessment.

    (PDF)

    S4 Table. Main reasons of exclusion of eligible studies.

    (PDF)

    S5 Table. Risk of bias assessment.

    (PDF)

    S6 Table. Characteristics of included studies.

    (PDF)

    S7 Table. Individual characteristics of included studies.

    (PDF)

    S8 Table. Subgroup analyses of worldwide case fatality rate and prevalence of Crimean-congo hemorrhagic fever virus in humans, ticks, and other animals.

    (PDF)

    S9 Table. Univariable and multivariable meta-regression analysis on the human case fatality rate and prevalence of CCHFV in humans, ticks, and other animal species.

    (PDF)

    S1 Fig. Global case fatality rate estimate of Crimean-Congo hemorrhagic fever virus acute, recent and past infections in humans.

    (PDF)

    S2 Fig. Global prevalence estimate of Crimean-Congo hemorrhagic fever virus acute, recent and past infections in humans.

    (PDF)

    S3 Fig. Global prevalence of Crimean-congo hemorrhagic fever virus infections in ticks.

    (PDF)

    S4 Fig. Global prevalence estimate of Crimean-Congo hemorrhagic fever virus acute, recent and past exposure in other animal species.

    (PDF)

    S5 Fig. Funnel plot for publication for global case fatality rate of Crimean-congo hemorrhagic fever virus in humans with acute infections.

    (PDF)

    S6 Fig. Funnel plot for publication for global case fatality rate of Crimean-congo hemorrhagic fever virus in humans with recent infection.

    (PDF)

    S7 Fig. Funnel plot for publication for global case fatality rate of Crimean-congo hemorrhagic fever virus in humans with past infection.

    (PDF)

    S8 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus prevalence in Humans with acute infections.

    (PDF)

    S9 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus prevalence in Humans with recent infections.

    (PDF)

    S10 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus prevalence in Humans with past infections.

    (PDF)

    S11 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in ticks.

    (PDF)

    S12 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in other animals with acute infections.

    (PDF)

    S13 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in other animals recent infections.

    (PDF)

    S14 Fig. Funnel plot for publication for global prevalence of Crimean-congo hemorrhagic fever virus in other animals with past infections.

    (PDF)

    Attachment

    Submitted filename: Response to Reviewers PNTD-S-20-02469.doc

    Attachment

    Submitted filename: Response to Reviewers PNTD-S-20-02469.doc

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting Information files.


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