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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2021 Apr 13;77(Pt 5):522–526. doi: 10.1107/S2056989021003753

5-Meth­oxy-N,N-di-n-propyl­tryptamine (5-MeO-DPT): freebase and fumarate

Duyen N K Pham a, Andrew R Chadeayne b, James A Golen a, David R Manke a,*
PMCID: PMC8100262  PMID: 34026257

The solid-state structure of the synthetic psychedelic 5-MeO-DPT is reported in its freebase form and as its fumarate salt.

Keywords: crystal structure, tryptamines, indoles, hydrogen bonding

Abstract

The solid-state structures of the synthetic psychedelic 5-meth­oxy-N,N-di-n-propyl­tryptamine (5-MeO-DPT) {systematic name: N-[2-(5-meth­oxy-1H-indol-3-yl)eth­yl]-N-propyl­propan-1-amine}, C17H25N2O, and its fumarate salt, bis­(5-meth­oxy-N,N-di-n-propyl­tryptammonium) fumarate (systematic name: bis­{N-[2-(5-meth­oxy-1H-indol-3-yl)eth­yl]-N-propyl­propan-1-aminium} but-2-ene­dio­ate), 2C17H25N2O+·C4H2O4 2−, are reported. The freebase has a single tryptamine mol­ecule in the asymmetric unit. The mol­ecules are linked together by N—H⋯N hydrogen bonds in zigzag chains along the [010] direction. The fumarate salt has a single tryptammonium cation and half of a fumarate dianion in the asymmetric unit. The tryptammonium and fumarate ions are held together in one-dimensional chains by a series of N—H⋯O hydrogen bonds. These chains are combinations of R 4 4(22) rings, and C 2 2(14) and C 4 4(28) parallel chains along [001].

Chemical context  

5-Meth­oxy-N,N-di­methyl­tryptamine (5-MeO-DMT) is a psychoactive indole­alkyl­amine that is found in a number of plants and animals, but is best known to be present in the parotid glands of the Colorado River toad, Bufo alvarius (Shen et al., 2010). 5-MeO-DMT demonstrates high activity at the serotonin (5-hy­droxy­tryptamine, 5-HT) 2A receptor, which leads to its psychotropic activity. Recent research has pointed to 5-MeO-DMT as a promising pharmaceutical in the treatment of mental health disorders (Uthaug et al., 2019). There are a number of synthetic N,N-dialkyl derivatives including 5-meth­oxy-N-methyl-N-iso­propyl­tryptamin (5-MeO-MiPT), 5-meth­oxy-N,N-di­ethyl­tryptamine (5-MeO-DET), 5-meth­oxy-N,N-di-n-propyl­tryptamine (5-MeO-DPT) and 5-meth­oxy-N,N-diiso­propyl­tryptamine (5-MeO-DiPT). Alexander Shulgin described the experience associated with inhalation of these derivatives in humans, with 5-MeO-DMT described as ‘positive and out-of-body’ while 5-MeO-DPT was described as ‘good and bad’ (Shulgin & Shulgin, 1997). 5-MeO-DPT has not been described much in the scientific literature, though a recent report described its activity at the 5-HT1A and 5-HT2A receptors showing 75–100% of full agonism at both receptors (Åstrand et al., 2020). As this class of compounds becomes more important for the treatment of mental health in humans, an in depth understanding of these compounds and how the structural changes impact the clinical experience in humans is going to be significant. To do so, it is important to have analytically pure, well-characterized compounds, ideally as crystalline materials. Herein we report the first structures of 5-MeO-DPT, both as its freebase and as its fumarate salt.graphic file with name e-77-00522-scheme1.jpg

Structural commentary  

The asymmetric unit of 5-meth­oxy-N,N-di-n-propyl­tryptamine (5-MeO-DPT) freebase contains a single tryptamine mol­ecule (Fig. 1, left). It possesses a near planar indole unit with an r.m.s. deviation from planarity of 0.012 Å. The meth­oxy group is in the same plane as the indole ring with a C6—C5—O1—C17 torsion angle of −1.2 (2)°. The ethyl­amino arm is turned away from the indole plane with a C1—C8—C9—C10 torsion angle of 110.4 (2)°.

Figure 1.

Figure 1

The mol­ecular structures of 5-MeO-DPT freebase (left) and 5-MeO-DPT fumarate (right), showing the atomic labeling. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen bonds are shown as dashed lines. Symmetry code: (i) 1 − x, 2 − y, 2 − z.

The asymmetric unit of bis­(5-meth­oxy-N,N-di-n-propyl­tryptammonium) fumarate contains one tryptammonium cation and half of a fumarate dianion (Fig. 1, right). The tryptammonium cation possesses a near planar indole unit with a deviation from planarity of 0.015 Å. The meth­oxy group is turned slightly from the plane of the indole ring with a C6—C5—O1—C17 torsion angle of −13.5 (4)°. The ethyl­amino arm is turned away from the indole plane with a C1—C8—C9—C10 torsion angle of −104.8 (3)°. The second half of the fumarate dianion is generated by inversion, and is near planar with an r.m.s. deviation from planarity of 0.022 Å.

Supra­molecular features  

In the solid-state structure of 5-MeO-DPT freebase, the mol­ecules are held together by an N1—H1⋯N2 hydrogen bond between the indole N—H and the amino nitro­gen atom. These hydrogen bonds join the mol­ecules together in infinite chains along the [010] direction (Table 1). The crystal packing of 5-MeO-DPT freebase is shown on the left in Fig. 2.

Table 1. Hydrogen-bond geometry (Å, °) for 5-MeO-DPT freebase .

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯N2i 0.878 (18) 2.167 (19) 3.0070 (17) 160.0 (16)

Symmetry code: (i) -x+{\script{3\over 2}}, y+{\script{1\over 2}}, -z+{\script{1\over 2}}.

Figure 2.

Figure 2

The crystal packing of 5-MeO-DPT freebase (left), viewed along the a axis, and the crystal packing of 5-MeO-DPT fumarate (right), viewed along the a axis. The hydrogen bonds (Tables 1 and 2) are shown as dashed lines. Hydrogen atoms not involved in hydrogen bonds are omitted for clarity.

In the structure of 5-MeO-DPT fumarate, the tryptammonium cation is linked to the fumarate dianion in the asymmetric unit through an N2—H2⋯O3 hydrogen bond between the ammonium nitro­gen and a carboxyl­ate oxygen of the fumarate. There is also an N1—H1⋯O4 hydrogen bond between the indole nitro­gen and the other oxygen of the carboxyl­ate group on a symmetry-generated fumarate dianion (Table 2). The crystal packing of 5-MeO-DPT fumarate is shown on the right in Fig. 2. Two tryptammonium cations and two fumarate dianions are joined together through these hydrogen bonds to form rings with graph-set notation Inline graphic(22) (Etter et al., 1990). The rings are joined together by two parallel chains along [001]. These chains have graph-set notation Inline graphic(14) and Inline graphic(28). The chains and rings are shown in Fig. 3.

Table 2. Hydrogen-bond geometry (Å, °) for 5-MeO-DPT fumarate .

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2⋯O3 0.98 (2) 1.68 (2) 2.6588 (17) 175 (2)
N1—H1⋯O4i 0.86 (2) 1.91 (3) 2.757 (2) 171 (2)

Symmetry code: (i) -x+1, -y+2, -z+1.

Figure 3.

Figure 3

The hydrogen-bonding network along [001], which consists of Inline graphic(22) rings that are joined together by two parallel Inline graphic(14) and Inline graphic(28) chains. The three components described in graph-set notation and the combined chain is shown. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen atoms not involved in hydrogen bonding are omitted for clarity. Hydrogen bonds are shown as dashed lines.

Database survey  

The two structures reported are most closely related to the freebase of 5-meth­oxy-N,N-di­allyl­tryptamine, or 5-MeO-DALT (CCDC 1995802; Chadeayne et al., 2020c ), and the fumarate of 5-MeO-DALT (Pham, Sammeta et al., 2021), which exhibit solid-state structures that are very similar to those reported here. The freebase of 5-MeO-DPT and 5-MeO-DALT have nearly identical unit cells. The fumarates of the two 5-MeO-DPT analogs exhibit the same chains, showing Inline graphic(22) rings and Inline graphic(14) and Inline graphic(28) chains in both cases. The other N,N-di-n-propyl­tryptamine structures known are 4-hy­droxy-N,N-di-n-propyl­tryptammonium chloride (Sammeta et al., 2020) and bis­(4-hy­droxy-N,N-di-n-propyl­tryptammonium) fumarate (CCDC 1962339; Chadeayne, Pham et al., 2019). The other tryptamine freebase structures known are the natural products N,N-di­methyl­tryptamine, or DMT (DMTRYP; Falkenberg, 1972), 5-MeO-DMT (QQQAGY; Bergin et al., 1968), psilocybin (PSILOC; Weber & Petcher, 1974), psilocin (PSILIN; Petcher & Weber, 1974) and norpsilocin (CCDC 1992279; Chadeayne et al., 2020b ), and the synthetic psychedelic N-methyl-N-n-propyl­tryptamine (WOHYAW; Chad­eayne et al., 2019b ). The other fumarate salts of tryptamines known are norpsilocin (CCDC 1992278; Chadeayne et al., 2020b ), 4-hy­droxy-N-methyl-N-iso­propyl­tryptamine (CCDC 1962339; Chadeayne et al., 2020a ), 5-meth­oxy-2,N,N-tri­methyl­tryptamine (Pham, Chadeayne et al., 2021) and psilacetin (HOCJUH; Chadeayne et al., 2019a ).

Synthesis and crystallization  

Slow evaporation of an acetone solution of a commercial sample (Chem Logix) of 5-MeO-DPT freebase resulted in the formation of crystals of 5-meth­oxy-N,N-di-n-propyl­tryptamine suitable for X-ray analysis. Crystals of bis­(5-meth­oxy-N,N-di-n-propyl­tryptammonium) fumarate were grown from the slow evaporation of an aceto­nitrile solution of a commercial sample (Chem Logix) of 5-MeO-DPT fumarate.

Refinement  

Crystal data, data collection and structure refinement details are summarized in Table 3.

Table 3. Experimental details.

  5-MeO-DPT freebase 5-MeO-DPT fumarate
Crystal data
Chemical formula C17H26N2O C17H27N2O+·0.5C4H2O4 2−
M r 274.40 332.43
Crystal system, space group Monoclinic, P21/n Triclinic, P\overline{1}
Temperature (K) 297 297
a, b, c (Å) 6.2223 (3), 13.0931 (6), 19.7791 (10) 9.2956 (6), 9.4443 (6), 12.7427 (8)
α, β, γ (°) 90, 91.825 (2), 90 78.552 (2), 75.929 (2), 60.806 (2)
V3) 1610.57 (13) 943.06 (11)
Z 4 2
Radiation type Mo Kα Mo Kα
μ (mm−1) 0.07 0.08
Crystal size (mm) 0.38 × 0.3 × 0.06 0.3 × 0.22 × 0.2
 
Data collection
Diffractometer Bruker D8 Venture CMOS Bruker D8 Venture CMOS
Absorption correction Multi-scan (SADABS; Bruker, 2018) Multi-scan (SADABS; Bruker, 2018)
T min, T max 0.687, 0.745 0.722, 0.745
No. of measured, independent and observed [I > 2σ(I)] reflections 29365, 3035, 2466 37231, 3565, 3006
R int 0.038 0.032
(sin θ/λ)max−1) 0.610 0.611
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.042, 0.117, 1.06 0.052, 0.142, 1.05
No. of reflections 3035 3565
No. of parameters 189 228
H-atom treatment H atoms treated by a mixture of independent and constrained refinement H atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3) 0.14, −0.17 0.29, −0.15

Computer programs: APEX3 and SAINT (Bruker, 2018), SHELXT2014 (Sheldrick, 2015a ), SHELXL2018 (Sheldrick, 2015b ), OLEX2 (Dolomanov et al., 2009) and publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) umd2187e_a, umd2188f_a. DOI: 10.1107/S2056989021003753/zq2261sup1.cif

e-77-00522-sup1.cif (1.9MB, cif)

Structure factors: contains datablock(s) umd2187e_a. DOI: 10.1107/S2056989021003753/zq2261umd2187e_asup2.hkl

Structure factors: contains datablock(s) umd2188f_a. DOI: 10.1107/S2056989021003753/zq2261umd2188f_asup3.hkl

Supporting information file. DOI: 10.1107/S2056989021003753/zq2261umd2187e_asup4.cml

Supporting information file. DOI: 10.1107/S2056989021003753/zq2261umd2188f_asup5.cml

CCDC references: 2075928, 2075927

Additional supporting information: crystallographic information; 3D view; checkCIF report

Acknowledgments

Financial statements and conflict of inter­est: This study was funded by CaaMTech, Inc. ARC reports an ownership inter­est in CaaMTech, Inc., which owns US and worldwide patent applications covering new tryptamine compounds, compositions, formulations, novel crystalline forms, and methods of making and using the same.

supplementary crystallographic information

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Crystal data

C17H26N2O F(000) = 600
Mr = 274.40 Dx = 1.132 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
a = 6.2223 (3) Å Cell parameters from 9916 reflections
b = 13.0931 (6) Å θ = 3.3–25.6°
c = 19.7791 (10) Å µ = 0.07 mm1
β = 91.825 (2)° T = 297 K
V = 1610.57 (13) Å3 PLATE, colourless
Z = 4 0.38 × 0.3 × 0.06 mm

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Data collection

Bruker D8 Venture CMOS diffractometer 2466 reflections with I > 2σ(I)
φ and ω scans Rint = 0.038
Absorption correction: multi-scan (SADABS; Bruker, 2018) θmax = 25.7°, θmin = 3.3°
Tmin = 0.687, Tmax = 0.745 h = −7→7
29365 measured reflections k = −15→15
3035 independent reflections l = −24→24

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Refinement

Refinement on F2 Hydrogen site location: mixed
Least-squares matrix: full H atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.042 w = 1/[σ2(Fo2) + (0.050P)2 + 0.3694P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.117 (Δ/σ)max < 0.001
S = 1.06 Δρmax = 0.14 e Å3
3035 reflections Δρmin = −0.17 e Å3
189 parameters Extinction correction: SHELXL2018 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraints Extinction coefficient: 0.046 (13)

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.64844 (19) 0.70622 (10) 0.52927 (6) 0.0702 (4)
N1 0.9733 (2) 0.87177 (9) 0.29883 (7) 0.0504 (3)
N2 0.28056 (16) 0.56376 (8) 0.22986 (5) 0.0412 (3)
C1 0.8201 (2) 0.84119 (10) 0.25168 (8) 0.0494 (4)
H1A 0.821475 0.857658 0.205961 0.059*
C2 0.9167 (2) 0.83449 (10) 0.36067 (7) 0.0452 (3)
C3 1.0138 (2) 0.84559 (12) 0.42487 (8) 0.0569 (4)
H3 1.140767 0.882380 0.430949 0.068*
C4 0.9172 (3) 0.80093 (13) 0.47864 (8) 0.0597 (4)
H4 0.980435 0.807252 0.521685 0.072*
C5 0.7252 (2) 0.74592 (11) 0.47013 (8) 0.0523 (4)
C6 0.6272 (2) 0.73433 (10) 0.40727 (7) 0.0472 (4)
H6 0.499370 0.697976 0.401965 0.057*
C7 0.7248 (2) 0.77873 (9) 0.35118 (7) 0.0421 (3)
C8 0.6655 (2) 0.78344 (10) 0.28070 (7) 0.0442 (3)
C9 0.4698 (2) 0.73615 (10) 0.24763 (8) 0.0501 (4)
H9A 0.450938 0.763236 0.202185 0.060*
H9B 0.344490 0.755116 0.272754 0.060*
C10 0.4834 (2) 0.61913 (10) 0.24396 (7) 0.0429 (3)
H10A 0.583107 0.601344 0.209131 0.051*
H10B 0.544432 0.594539 0.286666 0.051*
C11 0.1721 (2) 0.60049 (11) 0.16734 (7) 0.0476 (4)
H11A 0.279545 0.613815 0.133983 0.057*
H11B 0.100723 0.664575 0.176709 0.057*
C12 0.0078 (2) 0.52602 (12) 0.13767 (8) 0.0530 (4)
H12A 0.080879 0.464283 0.124003 0.064*
H12B −0.092372 0.507608 0.172213 0.064*
C13 −0.1154 (4) 0.56964 (18) 0.07758 (10) 0.0941 (7)
H13A −0.216369 0.519855 0.060362 0.141*
H13B −0.017190 0.587135 0.042962 0.141*
H13C −0.191324 0.629728 0.091108 0.141*
C14 0.1352 (2) 0.56727 (12) 0.28718 (7) 0.0508 (4)
H14A −0.007626 0.547160 0.271228 0.061*
H14B 0.126623 0.637215 0.303036 0.061*
C15 0.2017 (3) 0.50025 (12) 0.34569 (8) 0.0598 (4)
H15A 0.339619 0.523201 0.364219 0.072*
H15B 0.218942 0.430741 0.329783 0.072*
C16 0.0390 (3) 0.50174 (17) 0.40067 (10) 0.0814 (6)
H16A 0.084291 0.456110 0.436343 0.122*
H16B −0.098413 0.480319 0.382311 0.122*
H16C 0.027543 0.569755 0.418335 0.122*
C17 0.4531 (3) 0.65147 (16) 0.52456 (10) 0.0800 (6)
H17A 0.414835 0.629014 0.568787 0.120*
H17B 0.469744 0.593254 0.495692 0.120*
H17C 0.341808 0.694924 0.505997 0.120*
H1 1.073 (3) 0.9177 (14) 0.2916 (9) 0.066 (5)*

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0744 (8) 0.0789 (8) 0.0573 (7) 0.0026 (6) 0.0055 (6) 0.0104 (6)
N1 0.0454 (7) 0.0430 (7) 0.0630 (8) −0.0051 (5) 0.0051 (6) −0.0007 (6)
N2 0.0352 (5) 0.0404 (6) 0.0482 (6) 0.0007 (4) 0.0025 (4) 0.0014 (5)
C1 0.0542 (8) 0.0387 (7) 0.0554 (8) 0.0021 (6) 0.0036 (7) −0.0006 (6)
C2 0.0399 (7) 0.0370 (7) 0.0587 (8) 0.0038 (5) 0.0017 (6) −0.0042 (6)
C3 0.0425 (7) 0.0584 (9) 0.0691 (10) −0.0016 (7) −0.0065 (7) −0.0082 (8)
C4 0.0540 (9) 0.0680 (10) 0.0564 (9) 0.0060 (8) −0.0074 (7) −0.0066 (8)
C5 0.0527 (8) 0.0495 (8) 0.0550 (9) 0.0098 (7) 0.0039 (7) 0.0013 (7)
C6 0.0435 (7) 0.0394 (7) 0.0587 (9) 0.0014 (6) 0.0013 (6) 0.0002 (6)
C7 0.0387 (7) 0.0320 (6) 0.0555 (8) 0.0045 (5) 0.0010 (6) −0.0035 (6)
C8 0.0446 (7) 0.0319 (6) 0.0559 (8) 0.0032 (5) −0.0008 (6) −0.0030 (6)
C9 0.0487 (8) 0.0392 (7) 0.0616 (9) 0.0025 (6) −0.0092 (6) −0.0008 (6)
C10 0.0363 (7) 0.0395 (7) 0.0528 (8) 0.0019 (5) 0.0013 (5) −0.0017 (6)
C11 0.0469 (7) 0.0464 (8) 0.0493 (8) −0.0055 (6) −0.0007 (6) 0.0040 (6)
C12 0.0456 (8) 0.0514 (8) 0.0617 (9) −0.0052 (6) −0.0030 (6) 0.0013 (7)
C13 0.0982 (15) 0.1021 (16) 0.0794 (13) −0.0435 (13) −0.0369 (11) 0.0253 (12)
C14 0.0422 (7) 0.0563 (9) 0.0543 (8) 0.0048 (6) 0.0060 (6) 0.0050 (7)
C15 0.0695 (10) 0.0524 (9) 0.0579 (9) 0.0011 (8) 0.0090 (7) 0.0071 (7)
C16 0.0866 (13) 0.0960 (15) 0.0627 (11) −0.0025 (11) 0.0185 (9) 0.0148 (10)
C17 0.0822 (12) 0.0812 (13) 0.0773 (12) −0.0058 (10) 0.0137 (10) 0.0226 (10)

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Geometric parameters (Å, º)

O1—C5 1.3794 (18) C10—H10A 0.9700
O1—C17 1.412 (2) C10—H10B 0.9700
N1—C1 1.3716 (19) C11—H11A 0.9700
N1—C2 1.3734 (19) C11—H11B 0.9700
N1—H1 0.878 (18) C11—C12 1.5171 (19)
N2—C10 1.4745 (16) C12—H12A 0.9700
N2—C11 1.4705 (17) C12—H12B 0.9700
N2—C14 1.4735 (17) C12—C13 1.506 (2)
C1—H1A 0.9300 C13—H13A 0.9600
C1—C8 1.364 (2) C13—H13B 0.9600
C2—C3 1.396 (2) C13—H13C 0.9600
C2—C7 1.4070 (18) C14—H14A 0.9700
C3—H3 0.9300 C14—H14B 0.9700
C3—C4 1.369 (2) C14—C15 1.500 (2)
C4—H4 0.9300 C15—H15A 0.9700
C4—C5 1.401 (2) C15—H15B 0.9700
C5—C6 1.376 (2) C15—C16 1.510 (2)
C6—H6 0.9300 C16—H16A 0.9600
C6—C7 1.4071 (19) C16—H16B 0.9600
C7—C8 1.4318 (19) C16—H16C 0.9600
C8—C9 1.4980 (19) C17—H17A 0.9600
C9—H9A 0.9700 C17—H17B 0.9600
C9—H9B 0.9700 C17—H17C 0.9600
C9—C10 1.5363 (18)
C5—O1—C17 117.15 (13) N2—C11—H11A 108.8
C1—N1—C2 108.02 (12) N2—C11—H11B 108.8
C1—N1—H1 124.6 (11) N2—C11—C12 113.62 (11)
C2—N1—H1 126.2 (11) H11A—C11—H11B 107.7
C11—N2—C10 111.44 (10) C12—C11—H11A 108.8
C11—N2—C14 111.12 (10) C12—C11—H11B 108.8
C14—N2—C10 112.44 (11) C11—C12—H12A 109.1
N1—C1—H1A 124.5 C11—C12—H12B 109.1
C8—C1—N1 111.08 (13) H12A—C12—H12B 107.9
C8—C1—H1A 124.5 C13—C12—C11 112.43 (13)
N1—C2—C3 131.08 (13) C13—C12—H12A 109.1
N1—C2—C7 107.83 (12) C13—C12—H12B 109.1
C3—C2—C7 121.08 (14) C12—C13—H13A 109.5
C2—C3—H3 120.8 C12—C13—H13B 109.5
C4—C3—C2 118.30 (14) C12—C13—H13C 109.5
C4—C3—H3 120.8 H13A—C13—H13B 109.5
C3—C4—H4 119.3 H13A—C13—H13C 109.5
C3—C4—C5 121.32 (15) H13B—C13—H13C 109.5
C5—C4—H4 119.3 N2—C14—H14A 108.6
O1—C5—C4 114.14 (14) N2—C14—H14B 108.6
C6—C5—O1 124.69 (14) N2—C14—C15 114.48 (12)
C6—C5—C4 121.16 (14) H14A—C14—H14B 107.6
C5—C6—H6 120.8 C15—C14—H14A 108.6
C5—C6—C7 118.48 (13) C15—C14—H14B 108.6
C7—C6—H6 120.8 C14—C15—H15A 109.2
C2—C7—C6 119.65 (13) C14—C15—H15B 109.2
C2—C7—C8 107.37 (12) C14—C15—C16 111.92 (14)
C6—C7—C8 132.94 (12) H15A—C15—H15B 107.9
C1—C8—C7 105.68 (12) C16—C15—H15A 109.2
C1—C8—C9 128.30 (14) C16—C15—H15B 109.2
C7—C8—C9 126.00 (13) C15—C16—H16A 109.5
C8—C9—H9A 109.0 C15—C16—H16B 109.5
C8—C9—H9B 109.0 C15—C16—H16C 109.5
C8—C9—C10 112.80 (11) H16A—C16—H16B 109.5
H9A—C9—H9B 107.8 H16A—C16—H16C 109.5
C10—C9—H9A 109.0 H16B—C16—H16C 109.5
C10—C9—H9B 109.0 O1—C17—H17A 109.5
N2—C10—C9 116.81 (11) O1—C17—H17B 109.5
N2—C10—H10A 108.1 O1—C17—H17C 109.5
N2—C10—H10B 108.1 H17A—C17—H17B 109.5
C9—C10—H10A 108.1 H17A—C17—H17C 109.5
C9—C10—H10B 108.1 H17B—C17—H17C 109.5
H10A—C10—H10B 107.3
O1—C5—C6—C7 −179.67 (13) C3—C4—C5—C6 0.3 (2)
N1—C1—C8—C7 0.81 (15) C4—C5—C6—C7 0.3 (2)
N1—C1—C8—C9 179.30 (13) C5—C6—C7—C2 −0.84 (19)
N1—C2—C3—C4 178.54 (14) C5—C6—C7—C8 −178.36 (13)
N1—C2—C7—C6 −178.18 (11) C6—C7—C8—C1 177.31 (14)
N1—C2—C7—C8 −0.08 (14) C6—C7—C8—C9 −1.2 (2)
N2—C11—C12—C13 174.55 (15) C7—C2—C3—C4 −0.1 (2)
N2—C14—C15—C16 −176.15 (14) C7—C8—C9—C10 −71.42 (18)
C1—N1—C2—C3 −178.24 (14) C8—C9—C10—N2 163.85 (12)
C1—N1—C2—C7 0.57 (15) C10—N2—C11—C12 160.69 (11)
C1—C8—C9—C10 110.38 (16) C10—N2—C14—C15 −74.13 (16)
C2—N1—C1—C8 −0.88 (16) C11—N2—C10—C9 55.06 (16)
C2—C3—C4—C5 −0.4 (2) C11—N2—C14—C15 160.17 (13)
C2—C7—C8—C1 −0.44 (14) C14—N2—C10—C9 −70.46 (15)
C2—C7—C8—C9 −178.97 (12) C14—N2—C11—C12 −73.06 (15)
C3—C2—C7—C6 0.77 (19) C17—O1—C5—C4 178.83 (15)
C3—C2—C7—C8 178.88 (12) C17—O1—C5—C6 −1.2 (2)
C3—C4—C5—O1 −179.69 (14)

N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-amine (umd2187e_a) . Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1···N2i 0.878 (18) 2.167 (19) 3.0070 (17) 160.0 (16)

Symmetry code: (i) −x+3/2, y+1/2, −z+1/2.

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Crystal data

C17H27N2O+·0.5C4H2O42 Z = 2
Mr = 332.43 F(000) = 360
Triclinic, P1 Dx = 1.171 Mg m3
a = 9.2956 (6) Å Mo Kα radiation, λ = 0.71073 Å
b = 9.4443 (6) Å Cell parameters from 9966 reflections
c = 12.7427 (8) Å θ = 2.6–25.6°
α = 78.552 (2)° µ = 0.08 mm1
β = 75.929 (2)° T = 297 K
γ = 60.806 (2)° BLOCK, colourless
V = 943.06 (11) Å3 0.3 × 0.22 × 0.2 mm

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Data collection

Bruker D8 Venture CMOS diffractometer 3006 reflections with I > 2σ(I)
φ and ω scans Rint = 0.032
Absorption correction: multi-scan (SADABS; Bruker, 2018) θmax = 25.8°, θmin = 2.6°
Tmin = 0.722, Tmax = 0.745 h = −11→11
37231 measured reflections k = −11→11
3565 independent reflections l = −15→15

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Refinement

Refinement on F2 0 restraints
Least-squares matrix: full Hydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.052 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.142 w = 1/[σ2(Fo2) + (0.0652P)2 + 0.3068P] where P = (Fo2 + 2Fc2)/3
S = 1.05 (Δ/σ)max < 0.001
3565 reflections Δρmax = 0.29 e Å3
228 parameters Δρmin = −0.15 e Å3

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 1.12338 (18) 0.1921 (2) 0.42565 (12) 0.0820 (5)
O3 0.56136 (18) 0.70109 (14) 0.91994 (11) 0.0619 (4)
O4 0.38521 (19) 0.94777 (15) 0.85790 (10) 0.0619 (4)
N1 0.6457 (2) 0.7968 (2) 0.29933 (12) 0.0592 (4)
N2 0.45383 (17) 0.62296 (15) 0.77576 (10) 0.0428 (3)
C1 0.5216 (3) 0.8238 (2) 0.38795 (14) 0.0569 (5)
H1A 0.419516 0.917793 0.395103 0.068*
C2 0.7767 (2) 0.6468 (2) 0.31704 (13) 0.0494 (4)
C3 0.9290 (3) 0.5609 (3) 0.25118 (14) 0.0611 (5)
H3 0.955315 0.605071 0.181743 0.073*
C4 1.0389 (2) 0.4104 (3) 0.29047 (15) 0.0635 (5)
H4 1.140948 0.351877 0.247161 0.076*
C5 1.0004 (2) 0.3427 (2) 0.39518 (15) 0.0564 (4)
C6 0.8487 (2) 0.4243 (2) 0.45998 (13) 0.0497 (4)
H6 0.822409 0.377642 0.528497 0.060*
C7 0.7346 (2) 0.5788 (2) 0.42102 (12) 0.0450 (4)
C8 0.5686 (2) 0.6934 (2) 0.46471 (13) 0.0474 (4)
C9 0.4679 (2) 0.6678 (2) 0.57159 (13) 0.0477 (4)
H9A 0.480231 0.558342 0.579746 0.057*
H9B 0.350672 0.743536 0.570911 0.057*
C10 0.5191 (2) 0.6913 (2) 0.66834 (12) 0.0470 (4)
H10A 0.640253 0.639174 0.658321 0.056*
H10B 0.478562 0.806815 0.670881 0.056*
C11 0.2669 (2) 0.7020 (2) 0.79912 (13) 0.0506 (4)
H11A 0.228284 0.658211 0.755537 0.061*
H11B 0.223555 0.817953 0.777702 0.061*
C12 0.1977 (3) 0.6766 (3) 0.91717 (16) 0.0767 (6)
H12A 0.232415 0.561287 0.936852 0.092*
H12B 0.244506 0.711049 0.961289 0.092*
C13 0.0122 (3) 0.7678 (4) 0.9418 (2) 0.1035 (10)
H13A −0.026624 0.732314 1.013936 0.155*
H13B −0.034648 0.747832 0.890459 0.155*
H13C −0.021980 0.882313 0.937002 0.155*
C14 0.5291 (2) 0.44102 (19) 0.78992 (14) 0.0502 (4)
H14A 0.504193 0.405008 0.733484 0.060*
H14B 0.477479 0.408059 0.859428 0.060*
C15 0.7152 (2) 0.3582 (2) 0.78522 (16) 0.0616 (5)
H15A 0.740808 0.395586 0.840557 0.074*
H15B 0.767606 0.388253 0.714986 0.074*
C16 0.7866 (3) 0.1758 (3) 0.8025 (2) 0.0940 (8)
H16A 0.906071 0.127238 0.795009 0.141*
H16B 0.758181 0.138666 0.749425 0.141*
H16C 0.741153 0.145089 0.874057 0.141*
C17 1.1057 (3) 0.1353 (3) 0.5365 (2) 0.0943 (8)
H17A 1.209504 0.044150 0.551443 0.141*
H17B 1.019527 0.101981 0.553796 0.141*
H17C 1.076098 0.220867 0.579927 0.141*
C18 0.4904 (2) 0.85411 (19) 0.91702 (12) 0.0450 (4)
C19 0.5356 (2) 0.92260 (19) 0.99289 (13) 0.0459 (4)
H19 0.619664 0.850477 1.032462 0.055*
H2 0.488 (3) 0.653 (3) 0.8317 (18) 0.076 (6)*
H1 0.632 (3) 0.872 (3) 0.247 (2) 0.082 (7)*

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0612 (9) 0.0809 (10) 0.0683 (9) −0.0035 (7) −0.0085 (7) −0.0156 (8)
O3 0.0872 (9) 0.0419 (7) 0.0638 (8) −0.0273 (6) −0.0301 (7) −0.0058 (5)
O4 0.0964 (10) 0.0497 (7) 0.0545 (7) −0.0402 (7) −0.0335 (7) 0.0072 (5)
N1 0.0791 (11) 0.0579 (9) 0.0412 (8) −0.0367 (9) −0.0112 (7) 0.0089 (7)
N2 0.0549 (8) 0.0428 (7) 0.0346 (6) −0.0256 (6) −0.0093 (6) −0.0018 (5)
C1 0.0699 (12) 0.0494 (10) 0.0460 (9) −0.0234 (9) −0.0121 (8) −0.0018 (7)
C2 0.0618 (10) 0.0595 (10) 0.0377 (8) −0.0384 (9) −0.0076 (7) 0.0000 (7)
C3 0.0678 (12) 0.0912 (15) 0.0387 (9) −0.0523 (11) 0.0002 (8) −0.0052 (9)
C4 0.0516 (10) 0.0923 (15) 0.0507 (10) −0.0368 (11) 0.0031 (8) −0.0204 (10)
C5 0.0494 (10) 0.0653 (11) 0.0528 (10) −0.0225 (9) −0.0094 (8) −0.0125 (8)
C6 0.0530 (9) 0.0553 (10) 0.0389 (8) −0.0253 (8) −0.0057 (7) −0.0027 (7)
C7 0.0528 (9) 0.0508 (9) 0.0366 (8) −0.0290 (8) −0.0062 (7) −0.0034 (6)
C8 0.0589 (10) 0.0483 (9) 0.0382 (8) −0.0269 (8) −0.0091 (7) −0.0039 (6)
C9 0.0522 (9) 0.0518 (9) 0.0401 (8) −0.0246 (8) −0.0066 (7) −0.0069 (7)
C10 0.0602 (10) 0.0447 (8) 0.0402 (8) −0.0278 (8) −0.0094 (7) −0.0021 (6)
C11 0.0560 (10) 0.0518 (9) 0.0417 (8) −0.0234 (8) −0.0094 (7) −0.0020 (7)
C12 0.0666 (13) 0.0915 (16) 0.0490 (11) −0.0273 (12) −0.0023 (9) 0.0073 (10)
C13 0.0757 (16) 0.114 (2) 0.0622 (14) −0.0133 (15) 0.0082 (12) 0.0053 (13)
C14 0.0616 (10) 0.0422 (9) 0.0496 (9) −0.0266 (8) −0.0120 (8) 0.0001 (7)
C15 0.0619 (11) 0.0588 (11) 0.0547 (10) −0.0233 (9) −0.0086 (8) 0.0003 (8)
C16 0.0797 (16) 0.0574 (13) 0.1040 (19) −0.0150 (12) 0.0017 (14) 0.0112 (12)
C17 0.0861 (17) 0.0747 (15) 0.0759 (16) 0.0002 (13) −0.0186 (13) −0.0065 (12)
C18 0.0623 (10) 0.0445 (9) 0.0353 (7) −0.0316 (8) −0.0082 (7) −0.0003 (6)
C19 0.0571 (10) 0.0450 (8) 0.0415 (8) −0.0280 (7) −0.0102 (7) −0.0024 (6)

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Geometric parameters (Å, º)

O1—C5 1.375 (2) C10—H10A 0.9700
O1—C17 1.408 (3) C10—H10B 0.9700
O3—C18 1.2592 (19) C11—H11A 0.9700
O4—C18 1.247 (2) C11—H11B 0.9700
N1—C1 1.365 (2) C11—C12 1.507 (2)
N1—C2 1.365 (2) C12—H12A 0.9700
N1—H1 0.86 (2) C12—H12B 0.9700
N2—C10 1.512 (2) C12—C13 1.486 (3)
N2—C11 1.496 (2) C13—H13A 0.9600
N2—C14 1.497 (2) C13—H13B 0.9600
N2—H2 0.98 (2) C13—H13C 0.9600
C1—H1A 0.9300 C14—H14A 0.9700
C1—C8 1.367 (2) C14—H14B 0.9700
C2—C3 1.392 (3) C14—C15 1.503 (3)
C2—C7 1.406 (2) C15—H15A 0.9700
C3—H3 0.9300 C15—H15B 0.9700
C3—C4 1.365 (3) C15—C16 1.504 (3)
C4—H4 0.9300 C16—H16A 0.9600
C4—C5 1.404 (3) C16—H16B 0.9600
C5—C6 1.375 (2) C16—H16C 0.9600
C6—H6 0.9300 C17—H17A 0.9600
C6—C7 1.400 (2) C17—H17B 0.9600
C7—C8 1.433 (2) C17—H17C 0.9600
C8—C9 1.503 (2) C18—C19 1.497 (2)
C9—H9A 0.9700 C19—C19i 1.308 (3)
C9—H9B 0.9700 C19—H19 0.9300
C9—C10 1.514 (2)
C5—O1—C17 116.90 (16) N2—C11—H11B 109.0
C1—N1—H1 119.0 (17) N2—C11—C12 113.04 (14)
C2—N1—C1 108.73 (15) H11A—C11—H11B 107.8
C2—N1—H1 132.3 (17) C12—C11—H11A 109.0
C10—N2—H2 105.8 (13) C12—C11—H11B 109.0
C11—N2—C10 112.05 (12) C11—C12—H12A 109.0
C11—N2—C14 111.85 (13) C11—C12—H12B 109.0
C11—N2—H2 106.2 (13) H12A—C12—H12B 107.8
C14—N2—C10 114.43 (12) C13—C12—C11 112.83 (18)
C14—N2—H2 105.8 (13) C13—C12—H12A 109.0
N1—C1—H1A 124.8 C13—C12—H12B 109.0
N1—C1—C8 110.45 (17) C12—C13—H13A 109.5
C8—C1—H1A 124.8 C12—C13—H13B 109.5
N1—C2—C3 131.24 (16) C12—C13—H13C 109.5
N1—C2—C7 107.90 (15) H13A—C13—H13B 109.5
C3—C2—C7 120.85 (17) H13A—C13—H13C 109.5
C2—C3—H3 120.6 H13B—C13—H13C 109.5
C4—C3—C2 118.74 (16) N2—C14—H14A 108.9
C4—C3—H3 120.6 N2—C14—H14B 108.9
C3—C4—H4 119.5 N2—C14—C15 113.16 (14)
C3—C4—C5 121.06 (17) H14A—C14—H14B 107.8
C5—C4—H4 119.5 C15—C14—H14A 108.9
O1—C5—C4 115.19 (17) C15—C14—H14B 108.9
O1—C5—C6 123.99 (17) C14—C15—H15A 109.2
C6—C5—C4 120.82 (18) C14—C15—H15B 109.2
C5—C6—H6 120.6 C14—C15—C16 111.96 (18)
C5—C6—C7 118.85 (16) H15A—C15—H15B 107.9
C7—C6—H6 120.6 C16—C15—H15A 109.2
C2—C7—C8 106.94 (15) C16—C15—H15B 109.2
C6—C7—C2 119.63 (15) C15—C16—H16A 109.5
C6—C7—C8 133.41 (15) C15—C16—H16B 109.5
C1—C8—C7 105.96 (15) C15—C16—H16C 109.5
C1—C8—C9 128.30 (17) H16A—C16—H16B 109.5
C7—C8—C9 125.70 (15) H16A—C16—H16C 109.5
C8—C9—H9A 108.9 H16B—C16—H16C 109.5
C8—C9—H9B 108.9 O1—C17—H17A 109.5
C8—C9—C10 113.31 (14) O1—C17—H17B 109.5
H9A—C9—H9B 107.7 O1—C17—H17C 109.5
C10—C9—H9A 108.9 H17A—C17—H17B 109.5
C10—C9—H9B 108.9 H17A—C17—H17C 109.5
N2—C10—C9 113.69 (13) H17B—C17—H17C 109.5
N2—C10—H10A 108.8 O3—C18—C19 115.90 (14)
N2—C10—H10B 108.8 O4—C18—O3 124.28 (15)
C9—C10—H10A 108.8 O4—C18—C19 119.80 (14)
C9—C10—H10B 108.8 C18—C19—H19 117.9
H10A—C10—H10B 107.7 C19i—C19—C18 124.2 (2)
N2—C11—H11A 109.0 C19i—C19—H19 117.9
O1—C5—C6—C7 178.60 (17) C3—C4—C5—O1 −178.61 (17)
O3—C18—C19—C19i −174.3 (2) C3—C4—C5—C6 1.8 (3)
O4—C18—C19—C19i 4.2 (3) C4—C5—C6—C7 −1.9 (3)
N1—C1—C8—C7 1.0 (2) C5—C6—C7—C2 0.2 (2)
N1—C1—C8—C9 −176.59 (16) C5—C6—C7—C8 178.52 (17)
N1—C2—C3—C4 179.92 (18) C6—C7—C8—C1 179.95 (18)
N1—C2—C7—C6 −179.66 (15) C6—C7—C8—C9 −2.4 (3)
N1—C2—C7—C8 1.61 (18) C7—C2—C3—C4 −1.6 (3)
N2—C11—C12—C13 174.7 (2) C7—C8—C9—C10 78.1 (2)
N2—C14—C15—C16 178.56 (17) C8—C9—C10—N2 −164.36 (13)
C1—N1—C2—C3 177.59 (18) C10—N2—C11—C12 −162.09 (16)
C1—N1—C2—C7 −1.0 (2) C10—N2—C14—C15 60.72 (19)
C1—C8—C9—C10 −104.8 (2) C11—N2—C10—C9 −60.66 (18)
C2—N1—C1—C8 0.0 (2) C11—N2—C14—C15 −170.49 (14)
C2—C3—C4—C5 0.0 (3) C14—N2—C10—C9 68.03 (18)
C2—C7—C8—C1 −1.58 (19) C14—N2—C11—C12 67.9 (2)
C2—C7—C8—C9 176.07 (15) C17—O1—C5—C4 166.9 (2)
C3—C2—C7—C6 1.5 (2) C17—O1—C5—C6 −13.5 (3)
C3—C2—C7—C8 −177.18 (15)

Symmetry code: (i) −x+1, −y+2, −z+2.

Bis{N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-propylpropan-1-aminium}; but-2-enedioate (umd2188f_a) . Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N2—H2···O3 0.98 (2) 1.68 (2) 2.6588 (17) 175 (2)
N1—H1···O4ii 0.86 (2) 1.91 (3) 2.757 (2) 171 (2)

Symmetry code: (ii) −x+1, −y+2, −z+1.

Funding Statement

This work was funded by National Science Foundation, Directorate for Mathematical and Physical Sciences grant CHE-1429086.

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) umd2187e_a, umd2188f_a. DOI: 10.1107/S2056989021003753/zq2261sup1.cif

e-77-00522-sup1.cif (1.9MB, cif)

Structure factors: contains datablock(s) umd2187e_a. DOI: 10.1107/S2056989021003753/zq2261umd2187e_asup2.hkl

Structure factors: contains datablock(s) umd2188f_a. DOI: 10.1107/S2056989021003753/zq2261umd2188f_asup3.hkl

Supporting information file. DOI: 10.1107/S2056989021003753/zq2261umd2187e_asup4.cml

Supporting information file. DOI: 10.1107/S2056989021003753/zq2261umd2188f_asup5.cml

CCDC references: 2075928, 2075927

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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