Skip to main content
Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2021 Apr 9;77(Pt 5):491–494. doi: 10.1107/S2056989021003649

Crystal structure and Hirshfeld surface analysis of [2-(1H-benzimidazol-2-yl-κN 3)aniline-κN]di­chlorido­zinc(II) N,N-di­methyl­formamide monosolvate

Mohd Muslim a, Md Serajul Haque Faizi b, Arif Ali a, Mohd Afzal c, Musheer Ahmad a,*, Necmi Dege d, Ashraf Mashrai e,*
PMCID: PMC8100270  PMID: 34026251

The asymmetric unit of the title complex contains one independent neutral complex mol­ecule, which consists of one zinc(II) ion, one bidentate ligand, and two chlorido ligands. The ligand consists of two moieties: benzimidazole and aniline. The Zn(II) ion adopts a distorted tetra­hedral coordination geometry. A Hirshfeld surface analysis was performed to qu­antify the inter­molecular inter­actions and help understand the overall packing nature of the title compound.

Keywords: crystal structure, benzimidazole, aniline, bidentate ligand, heterocyclic, zinc(II) complex

Abstract

The title compound, [ZnCl2(C13H11N3)]·C3H7NO, crystallized in the monoclinic crystal system in space group P21/n. The asymmetric unit contains one neutral complex mol­ecule, which consists of a zinc ion, a bidentate ligand, and two chlorido ligands with di­methyl­formamide monosolvate. The ligand has two moieties, a benzimidazole and an aniline group. The benzimidazole and aniline planes are not coplanar, subtending a dihedral angle of 18.24 (8)°. The Zn(II) ion shows distorted tetra­hedral geometry, being coordinated by an imidazole N atom, the aniline N atom, and two chlorido ligands. The packing features N—H⋯O, N—H⋯Cl, C—H⋯Cl hydrogen bonding.

Chemical context  

Benzimidazoles as organic ligands have attracted inter­est with regard to the synthesis of metal–organic frameworks, not only because of their coordination abilities to metal ions, but also their significant potential applications in biological systems (Ahmad & Bharadwaj; 2013; Sharma et al., 2016; Gu et al., 2017). Benzimidazole compounds and their metal complexes have been found to show diverse biological activity (Podunavac-Kuzmanovic & Cvetkovic, 2010), including inhibition against enteroviruses (Xue et al., 2011) and potent anti­tumor activity (Galarce et al., 2008). The bidentate ligand 2-(1H-benzo[d]imidazol-2-yl) aniline (L) has been used to prepare a series of mononuclear transition-metal complexes with halide anions as the active leaving group in our catalytic research. In this work, a mononuclear zinc complex ZnLCl2 is reported. Zinc complexes bearing various ancillary ligands have been applied in the catalysis of the copolymerization of cyclo­hexene oxide and CO2 (Kember et al., 2009).graphic file with name e-77-00491-scheme1.jpg

Structural commentary  

The asymmetric unit of the title complex (Fig. 1) contains one neutral complex mol­ecule, which consists of one central zinc ion, one bidentate ligand, and two chlorido ligands with di­methyl­formamide solvent. The two ligand moieties, benzimidazole and aniline, are not coplanar structure, subtending a dihedral angle of 18.24 (8)°. The C1—N1 and C7—N2 bond lengths are 1.449 (2) and 1.335 (2) Å, respectively. The complex is a four-coordinated system by one imidazole nitro­gen atom N2, one aniline nitro­gen atom N1, and two chlorido ligands. The distances from the zinc(II) ion to the coordinating atoms are all in the expected ranges. The bond angles around the zinc(II) atom are in the range 88.64 (7) to 118.57 (3)°, of which the smallest angle N1—Zn1—N2 is formed by the two nitro­gen atoms from the bidentate ligand.

Figure 1.

Figure 1

A view of the title complex with the atom labeling and displacement ellipsoids drawn at the 40% level.

Supra­molecular features  

In the crystal, mol­ecules are linked by N—H⋯Cl hydrogen bonds (Table 1, Fig. 2), forming sheets propagating along the b-axis direction (Fig. 3).

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1A⋯O1i 0.89 2.11 2.923 (2) 152
N1—H1B⋯Cl2ii 0.89 2.48 3.3592 (17) 170
N3—H3⋯O1 0.86 1.99 2.807 (2) 157
C2—H2⋯Cl2ii 0.93 2.93 3.734 (2) 145
C14—H14⋯Cl1iii 0.93 2.95 3.836 (3) 160

Symmetry codes: (i) -x+{\script{1\over 2}}, y+{\script{1\over 2}}, -z+{\script{1\over 2}}; (ii) -x+1, -y+2, -z+1; (iii) x+{\script{1\over 2}}, -y+{\script{3\over 2}}, z-{\script{1\over 2}}.

Figure 2.

Figure 2

A packing view approximately along [10Inline graphic] of the title complex. Hydrogen atoms are omitted for clarity.

Figure 3.

Figure 3

Supra­molecular view along the b axis of the crystal structure of the title complex formed through C—H⋯π, hydrogen-bonding, and other weak inter­actions.

Hirshfeld Surface analysis  

A Hirshfeld surface analysis (Spackman & Jayatilaka, 2009) was undertaken and the associated two-dimensional fingerprint plots (McKinnon, et al., 2007) generated using Crystal Explorer (Turner et al., 2017) to investigate the inter­molecular inter­actions and surface morphology of the crystal structure. The Hirshfeld surface mapped over d norm in the color range (_0.464 to 1.340 a.u.) from red (shorter than the sum of the van der Waals radii) and white to blue (longer distance than the sum of the van der Waals radii). The bright red spot on the d norm surface (Fig. 4 a) indicates the N—H⋯O hydrogen bonding. C—H⋯Cl contacts are evident as distinct circular depressions (red spots) and other visible spots on the d norm surface (Fig. 4 a) are due to H⋯H contacts. The surfaces of the title complex were also mapped over d e (0.834 to 2.650 Å), shape-index (−1.0000 to 1.0000 Å), and curvedness (−4.0000 to 0.4000 Å) in the given ranges. The flat green region on the d e surface represents similar contact distances (Fig. 4 b). The pattern of red and blue regions in the shape-index surface is characteristic of ring carbon atoms of the mol­ecule inside the surface. The shape of the blue outline on the curved surface shown in Fig. 4 d is evidence of the flat region toward the bottom of both sides of the mol­ecules.

Figure 4.

Figure 4

The Hirshfeld surface of the title complex mapped over (a) d norm, (b) de, (c) shape-index, and (d) curvedness. Red spots 1,2, and 3 in (a) and (b) correspond to N—H⋯O, N—H⋯Cl, and C—H⋯Cl hydrogen bonds.

Five types of major inter­actions in the crystal structure (H⋯Cl = 30%, C⋯H = 18.2%, O⋯H = 4.8%, N⋯H = 2.8%, N⋯C = 1.5%) are shown in the two-dimensional fingerprint plots (Fig. 5). The inter­action order (H⋯Cl)> (C⋯H)> (O⋯H)> (N⋯H)> (N⋯C) of d norm on the 2D fingerprint plot represents the nature of packing in the title crystal structure (Muslim et al., 2020). The pattern of inter­molecular inter­actions (H⋯Cl/Cl⋯H, C⋯H/H⋯C, O⋯H/H⋯O, N⋯H/H⋯O, and N⋯C/C⋯N) governs the overall packing and qu­anti­fies the contribution of the non-covalent inter­action (C—H⋯Cl) to the extended supra­molecular network (Seth et al., 2011; Seth, 2013; Manna et al., 2012; Mitra et al., 2014).

Figure 5.

Figure 5

(a) A full two-dimensional fingerprint plot of the title complex, and delineated into (b) H⋯Cl/Cl⋯H (30%), (c) C⋯H/H⋯C (18.2%), and (d) O⋯H/H⋯O (4.8%) contacts, which are the major inter­actions present in the crystal structure.

Database survey  

A search of the Cambridge Structural Database (CSD, version 5.39; Groom et al., 2016) gave thirteen hits for the [2-(1H-benzimidazol-2-yl]aniline)zinc(II) moiety. Two compounds whose structures are very similar to that of the title compound are [2-(1H-benzimidazol-2-yl)aniline]di­chlorido­zinc(II) (AWOLEE; Eltayeb et al., 2011a ) in which the di­methyl­formamide solvent is absent and di­chloro-[2-(1-methyl-1H-benzimidazol-2-yl)aniline]zinc(II) (ILELIW; Zhou et al., 2016) in which the NH group is replaced by an N—CH3 group. Zinc compounds with different ligands include (2-{[2-(1H-benzimidazol-2-yl-κN 3)phen­yl]imino­methyl-κN}-5-meth­ylphenolato-κO)chlorido­zinc(II) (AYINEC; Eltayeb et al., 2011b ) in which the zinc atom is surrounded by two imine nitro­gen, one phenolic oxygen and one chlorine atoms. Other complexes include bis­{N-[2-(1-butyl-5-nitro-1H-benzimidazol-2-yl)phen­yl]-4- methyl­benzene­sulfonamidato}zinc(II) with an unknown solvate (BUXDIJ; Burlov et al., 2016) and bis­{4-methyl-N-[2-(5-nitro-1-propyl-1H-benzimidazole-2-yl)phen­yl]benzene­sulfonamidato}zinc(II) chloro­form solvate (BUXDOP; Burlov et al., 2016), bis­{μ-[2-(5-amino-1-propyl-1H-benzimidazole-2-yl)phen­yl](4-methyl­benzene-1-sulfon­yl)amido}­bis­(pivalato)dizinc aceto­nitrile ethanol solvate dihydrate (EDOVUR; Nikolaevskii et al., 2014), bis­(μ2-3-{[2-(1H-benzimidazole-2-yl)phen­yl]carbonoimido­yl}benzene-1,2-diolato)dizinc(II) ethanol solvate (GABVUD; Wang et al., 2016), (acetato-O,O′)-[2-({[2-(1H-benzimidazole-2-yl)phen­yl]imino}­meth­yl)-5-(di­ethyl­amino)­phenolato]zinc(II) iso­pro­p­anol solvate (IKOYUE; Liao et al., 2016).

Synthesis and crystallization  

A mixture of 2-(2-amino­phenyl­benzimidazole) (0.05 g, 0.14 mmol) and ZnCl2·4H2O (0.125 g, 0.4 mmol) was dissolved in 5 ml of di­methyl­formamide (DMF) and then sealed in a Teflon-lined autoclave and heated under autogenous pressure to 453 K for 2 d and then allow to cool to room temperature at the rate of 1 K per minute. The resulting solution was filtered and kept for slow evaporation. After one week, block-shaped colorless crystals suitable for single-crystal X-ray diffraction data collection were obtained.

Refinement  

Crystal data, data collection and structure refinement details are summarized in Table 2. Hydrogen atoms were positioned geometrically (N—H = 0.86–0.89, C—H = 0.93–0.96 Å) included with U iso(H) = 1.2U eq(N, C) or 1.5U eq(C-meth­yl).

Table 2. Experimental details.

Crystal data
Chemical formula [ZnCl2(C13H11N3)]·C3H7NO
M r 418.61
Crystal system, space group Monoclinic, P21/n
Temperature (K) 296
a, b, c (Å) 10.9394 (9), 13.3041 (7), 13.1665 (11)
β (°) 106.140 (7)
V3) 1840.7 (2)
Z 4
Radiation type Mo Kα
μ (mm−1) 1.64
Crystal size (mm) 0.60 × 0.50 × 0.39
 
Data collection
Diffractometer Stoe IPDS 2
Absorption correction Integration (X-RED32; Stoe & Cie, 2002)
T min, T max 0.460, 0.567
No. of measured, independent and observed [I > 2σ(I)] reflections 19616, 5643, 3891
R int 0.036
(sin θ/λ)max−1) 0.717
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.037, 0.097, 1.04
No. of reflections 5643
No. of parameters 219
H-atom treatment H-atom parameters constrained
Δρmax, Δρmin (e Å−3) 0.34, −0.62

Computer programs: X-AREA (Stoe & Cie, 2002), SHELXT (Sheldrick, 2015a ), SHELXL2018/3 (Sheldrick, 2015b ), ORTEP-3 for Windows (Farrugia, 2012), and XP in SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989021003649/ex2042sup1.cif

e-77-00491-sup1.cif (658.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989021003649/ex2042Isup4.hkl

e-77-00491-Isup4.hkl (448.9KB, hkl)

CCDC reference: 2033195

Additional supporting information: crystallographic information; 3D view; checkCIF report

Acknowledgments

The Department of Applied Chemistry, ZHCET, Faculty of Engineering and Technology, Aligarh Muslim University, UP, India, is gratefully acknowledged for providing laboratory facilities. Author contributions are as follows. Conceptualization, AM, MA and MM; methodology, MA, AM and MSHF; investigation, ND, AA and MA; writing (original draft), MM and MSHF; writing (review and editing of the manuscript), MdA, MM and AA; visualization, MM, AA and MSHF; funding acquisition, AM; resources, ND and MA; supervision, AM and MA.

supplementary crystallographic information

Crystal data

[ZnCl2(C13H11N3)]·C3H7NO F(000) = 856
Mr = 418.61 Dx = 1.511 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
a = 10.9394 (9) Å Cell parameters from 22582 reflections
b = 13.3041 (7) Å θ = 1.5–31.0°
c = 13.1665 (11) Å µ = 1.64 mm1
β = 106.140 (7)° T = 296 K
V = 1840.7 (2) Å3 Prism, yellow
Z = 4 0.60 × 0.50 × 0.39 mm

Data collection

STOE IPDS 2 diffractometer 5643 independent reflections
Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus 3891 reflections with I > 2σ(I)
Plane graphite monochromator Rint = 0.036
Detector resolution: 6.67 pixels mm-1 θmax = 30.7°, θmin = 2.2°
rotation method scans h = −15→15
Absorption correction: integration (X-RED32; Stoe & Cie, 2002) k = −17→18
Tmin = 0.460, Tmax = 0.567 l = −18→18
19616 measured reflections

Refinement

Refinement on F2 0 restraints
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037 H-atom parameters constrained
wR(F2) = 0.097 w = 1/[σ2(Fo2) + (0.0502P)2 + 0.0362P] where P = (Fo2 + 2Fc2)/3
S = 1.04 (Δ/σ)max = 0.001
5643 reflections Δρmax = 0.34 e Å3
219 parameters Δρmin = −0.62 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Zn1 0.40345 (2) 0.83177 (2) 0.52883 (2) 0.04912 (8)
Cl2 0.61440 (5) 0.84302 (4) 0.60104 (5) 0.06630 (16)
Cl1 0.27561 (6) 0.87107 (5) 0.62724 (5) 0.07198 (17)
O1 0.41861 (16) 0.45845 (14) 0.17389 (14) 0.0726 (5)
N1 0.35146 (16) 0.90600 (12) 0.38489 (13) 0.0502 (4)
H1A 0.267634 0.900599 0.357590 0.060*
H1B 0.369650 0.970981 0.395980 0.060*
N3 0.37815 (15) 0.58840 (12) 0.32936 (13) 0.0504 (4)
H3 0.388210 0.563774 0.271825 0.060*
N2 0.36342 (15) 0.70047 (12) 0.44985 (13) 0.0476 (3)
N4 0.5564 (2) 0.35468 (17) 0.12569 (17) 0.0691 (5)
C7 0.38739 (18) 0.68676 (14) 0.35677 (15) 0.0455 (4)
C1 0.41353 (18) 0.86859 (16) 0.30855 (15) 0.0480 (4)
C13 0.34988 (17) 0.53440 (15) 0.40928 (16) 0.0486 (4)
C8 0.33936 (18) 0.60573 (14) 0.48466 (16) 0.0479 (4)
C6 0.42738 (18) 0.76471 (15) 0.29345 (15) 0.0482 (4)
C12 0.3365 (2) 0.43147 (16) 0.42430 (19) 0.0590 (5)
H12 0.345224 0.384308 0.374641 0.071*
C2 0.4613 (2) 0.93761 (18) 0.25020 (18) 0.0582 (5)
H2 0.452680 1.005994 0.261168 0.070*
C9 0.3122 (2) 0.57631 (17) 0.57798 (18) 0.0588 (5)
H9 0.304769 0.623164 0.628334 0.071*
C10 0.2969 (2) 0.47426 (18) 0.5923 (2) 0.0652 (6)
H10 0.277820 0.452174 0.653141 0.078*
C11 0.3097 (2) 0.40357 (18) 0.5165 (2) 0.0658 (6)
H11 0.299785 0.335685 0.529071 0.079*
C5 0.4888 (2) 0.73555 (19) 0.21791 (18) 0.0610 (5)
H5 0.499020 0.667438 0.206631 0.073*
C14 0.5136 (2) 0.4429 (2) 0.1430 (2) 0.0673 (6)
H14 0.558734 0.498851 0.131104 0.081*
C3 0.5212 (2) 0.9066 (2) 0.1763 (2) 0.0674 (6)
H3A 0.552587 0.953741 0.137785 0.081*
C4 0.5345 (2) 0.8051 (2) 0.1598 (2) 0.0694 (6)
H4 0.574124 0.783670 0.109566 0.083*
C15 0.4900 (4) 0.2641 (2) 0.1419 (3) 0.0947 (9)
H15A 0.458046 0.272789 0.202229 0.142*
H15B 0.547714 0.208200 0.153689 0.142*
H15C 0.420336 0.251482 0.080351 0.142*
C16 0.6699 (3) 0.3452 (3) 0.0881 (3) 0.1086 (13)
H16A 0.700566 0.410905 0.077503 0.163*
H16B 0.648854 0.308946 0.022441 0.163*
H16C 0.734825 0.309531 0.139603 0.163*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Zn1 0.05561 (14) 0.04018 (13) 0.05557 (14) −0.00002 (10) 0.02208 (10) −0.00610 (10)
Cl2 0.0557 (3) 0.0485 (3) 0.0914 (4) 0.0007 (2) 0.0149 (3) −0.0107 (3)
Cl1 0.0790 (4) 0.0697 (4) 0.0814 (4) 0.0010 (3) 0.0458 (3) −0.0117 (3)
O1 0.0641 (9) 0.0727 (11) 0.0876 (11) −0.0039 (8) 0.0320 (9) −0.0269 (9)
N1 0.0536 (9) 0.0383 (8) 0.0625 (10) 0.0024 (7) 0.0226 (8) −0.0004 (7)
N3 0.0548 (9) 0.0409 (9) 0.0557 (9) −0.0016 (7) 0.0155 (7) −0.0098 (7)
N2 0.0513 (8) 0.0383 (8) 0.0561 (9) 0.0002 (7) 0.0198 (7) −0.0054 (7)
N4 0.0641 (11) 0.0695 (13) 0.0731 (12) 0.0084 (10) 0.0178 (10) −0.0187 (10)
C7 0.0450 (9) 0.0381 (10) 0.0536 (10) 0.0006 (7) 0.0138 (8) −0.0064 (8)
C1 0.0458 (9) 0.0458 (10) 0.0531 (10) 0.0001 (8) 0.0152 (8) −0.0010 (8)
C13 0.0411 (9) 0.0405 (10) 0.0621 (11) 0.0009 (7) 0.0108 (8) −0.0044 (8)
C8 0.0442 (9) 0.0393 (9) 0.0612 (11) −0.0011 (7) 0.0162 (8) −0.0023 (8)
C6 0.0462 (9) 0.0459 (10) 0.0533 (10) −0.0012 (8) 0.0152 (8) −0.0047 (8)
C12 0.0551 (11) 0.0406 (11) 0.0781 (14) −0.0027 (9) 0.0131 (10) −0.0075 (10)
C2 0.0593 (12) 0.0504 (12) 0.0690 (13) −0.0024 (9) 0.0245 (10) 0.0031 (10)
C9 0.0626 (12) 0.0531 (12) 0.0657 (12) 0.0021 (10) 0.0259 (10) 0.0019 (10)
C10 0.0634 (13) 0.0587 (14) 0.0778 (15) −0.0017 (11) 0.0269 (11) 0.0136 (11)
C11 0.0586 (12) 0.0436 (11) 0.0936 (17) −0.0033 (10) 0.0185 (12) 0.0092 (11)
C5 0.0686 (13) 0.0557 (13) 0.0651 (12) 0.0001 (10) 0.0295 (11) −0.0092 (10)
C14 0.0619 (13) 0.0669 (15) 0.0772 (14) −0.0053 (11) 0.0262 (11) −0.0206 (12)
C3 0.0711 (14) 0.0680 (15) 0.0716 (14) −0.0072 (12) 0.0340 (12) 0.0047 (12)
C4 0.0759 (15) 0.0767 (16) 0.0670 (14) −0.0022 (13) 0.0388 (12) −0.0059 (12)
C15 0.122 (3) 0.0664 (18) 0.098 (2) 0.0083 (18) 0.0341 (19) −0.0014 (16)
C16 0.0760 (19) 0.124 (3) 0.134 (3) 0.0120 (18) 0.0440 (19) −0.051 (2)

Geometric parameters (Å, º)

Zn1—N2 2.0177 (16) C6—C5 1.401 (3)
Zn1—N1 2.0715 (17) C12—C11 1.376 (3)
Zn1—Cl1 2.2171 (6) C12—H12 0.9300
Zn1—Cl2 2.2432 (7) C2—C3 1.379 (3)
O1—C14 1.234 (3) C2—H2 0.9300
N1—C1 1.449 (2) C9—C10 1.387 (3)
N1—H1A 0.8900 C9—H9 0.9300
N1—H1B 0.8900 C10—C11 1.406 (4)
N3—C7 1.354 (2) C10—H10 0.9300
N3—C13 1.378 (3) C11—H11 0.9300
N3—H3 0.8600 C5—C4 1.380 (3)
N2—C7 1.335 (2) C5—H5 0.9300
N2—C8 1.391 (2) C14—H14 0.9300
N4—C14 1.307 (3) C3—C4 1.382 (4)
N4—C15 1.453 (4) C3—H3A 0.9300
N4—C16 1.465 (3) C4—H4 0.9300
C7—C6 1.471 (3) C15—H15A 0.9600
C1—C2 1.389 (3) C15—H15B 0.9600
C1—C6 1.410 (3) C15—H15C 0.9600
C13—C12 1.397 (3) C16—H16A 0.9600
C13—C8 1.401 (3) C16—H16B 0.9600
C8—C9 1.398 (3) C16—H16C 0.9600
N2—Zn1—N1 88.64 (7) C13—C12—H12 121.8
N2—Zn1—Cl1 115.06 (5) C3—C2—C1 121.2 (2)
N1—Zn1—Cl1 111.40 (5) C3—C2—H2 119.4
N2—Zn1—Cl2 109.06 (5) C1—C2—H2 119.4
N1—Zn1—Cl2 110.14 (5) C10—C9—C8 117.2 (2)
Cl1—Zn1—Cl2 118.57 (3) C10—C9—H9 121.4
C1—N1—Zn1 114.12 (12) C8—C9—H9 121.4
C1—N1—H1A 108.7 C9—C10—C11 121.2 (2)
Zn1—N1—H1A 108.7 C9—C10—H10 119.4
C1—N1—H1B 108.7 C11—C10—H10 119.4
Zn1—N1—H1B 108.7 C12—C11—C10 122.2 (2)
H1A—N1—H1B 107.6 C12—C11—H11 118.9
C7—N3—C13 108.43 (16) C10—C11—H11 118.9
C7—N3—H3 125.8 C4—C5—C6 121.8 (2)
C13—N3—H3 125.8 C4—C5—H5 119.1
C7—N2—C8 106.38 (16) C6—C5—H5 119.1
C7—N2—Zn1 121.43 (13) O1—C14—N4 125.6 (3)
C8—N2—Zn1 130.43 (13) O1—C14—H14 117.2
C14—N4—C15 120.1 (2) N4—C14—H14 117.2
C14—N4—C16 121.0 (3) C2—C3—C4 119.7 (2)
C15—N4—C16 118.9 (3) C2—C3—H3A 120.2
N2—C7—N3 110.96 (17) C4—C3—H3A 120.2
N2—C7—C6 126.08 (17) C5—C4—C3 119.8 (2)
N3—C7—C6 122.84 (17) C5—C4—H4 120.1
C2—C1—C6 119.87 (18) C3—C4—H4 120.1
C2—C1—N1 118.52 (18) N4—C15—H15A 109.5
C6—C1—N1 121.60 (17) N4—C15—H15B 109.5
N3—C13—C12 132.33 (19) H15A—C15—H15B 109.5
N3—C13—C8 105.54 (17) N4—C15—H15C 109.5
C12—C13—C8 122.1 (2) H15A—C15—H15C 109.5
N2—C8—C9 130.48 (18) H15B—C15—H15C 109.5
N2—C8—C13 108.66 (17) N4—C16—H16A 109.5
C9—C8—C13 120.83 (19) N4—C16—H16B 109.5
C5—C6—C1 117.58 (19) H16A—C16—H16B 109.5
C5—C6—C7 118.94 (18) N4—C16—H16C 109.5
C1—C6—C7 123.39 (17) H16A—C16—H16C 109.5
C11—C12—C13 116.5 (2) H16B—C16—H16C 109.5
C11—C12—H12 121.8
C8—N2—C7—N3 0.9 (2) N1—C1—C6—C7 −3.5 (3)
Zn1—N2—C7—N3 167.25 (13) N2—C7—C6—C5 158.9 (2)
C8—N2—C7—C6 −175.14 (18) N3—C7—C6—C5 −16.7 (3)
Zn1—N2—C7—C6 −8.8 (3) N2—C7—C6—C1 −17.5 (3)
C13—N3—C7—N2 −1.5 (2) N3—C7—C6—C1 166.93 (18)
C13—N3—C7—C6 174.63 (18) N3—C13—C12—C11 178.7 (2)
Zn1—N1—C1—C2 −135.94 (17) C8—C13—C12—C11 1.3 (3)
Zn1—N1—C1—C6 43.4 (2) C6—C1—C2—C3 0.7 (3)
C7—N3—C13—C12 −176.2 (2) N1—C1—C2—C3 −179.9 (2)
C7—N3—C13—C8 1.5 (2) N2—C8—C9—C10 −177.7 (2)
C7—N2—C8—C9 178.2 (2) C13—C8—C9—C10 0.2 (3)
Zn1—N2—C8—C9 13.6 (3) C8—C9—C10—C11 0.7 (3)
C7—N2—C8—C13 0.1 (2) C13—C12—C11—C10 −0.3 (3)
Zn1—N2—C8—C13 −164.58 (13) C9—C10—C11—C12 −0.7 (4)
N3—C13—C8—N2 −1.0 (2) C1—C6—C5—C4 0.0 (3)
C12—C13—C8—N2 177.06 (18) C7—C6—C5—C4 −176.6 (2)
N3—C13—C8—C9 −179.33 (19) C15—N4—C14—O1 0.5 (4)
C12—C13—C8—C9 −1.3 (3) C16—N4—C14—O1 179.4 (3)
C2—C1—C6—C5 −0.7 (3) C1—C2—C3—C4 −0.1 (4)
N1—C1—C6—C5 −179.96 (19) C6—C5—C4—C3 0.7 (4)
C2—C1—C6—C7 175.8 (2) C2—C3—C4—C5 −0.6 (4)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1A···O1i 0.89 2.11 2.923 (2) 152
N1—H1B···Cl2ii 0.89 2.48 3.3592 (17) 170
N3—H3···O1 0.86 1.99 2.807 (2) 157
C2—H2···Cl2ii 0.93 2.93 3.734 (2) 145
C14—H14···Cl1iii 0.93 2.95 3.836 (3) 160

Symmetry codes: (i) −x+1/2, y+1/2, −z+1/2; (ii) −x+1, −y+2, −z+1; (iii) x+1/2, −y+3/2, z−1/2.

Funding Statement

This work was funded by University Grants Commission grant .

References

  1. Ahmad, M. & Bharadwaj, P. K. (2013). Polyhedron, 52, 1145–1152.
  2. Burlov, A. S., Koshchienko, Y. V., Kiskin, M. A., Nikolaevskii, S. A., Garnovskii, D. A., Lermontov, A. S., Makarova, N. I., Metelitsa, A. S. & Eremenko, I. L. (2016). J. Mol. Struct. 1104, 7–13.
  3. Eltayeb, N. E., Teoh, S. G., Chantrapromma, S. & Fun, H.-K. (2011a). Acta Cryst. E67, m1062–m1063. [DOI] [PMC free article] [PubMed]
  4. Eltayeb, N. E., Teoh, S. G., Chantrapromma, S. & Fun, H.-K. (2011b). Acta Cryst. E67, m1182–m1183. [DOI] [PMC free article] [PubMed]
  5. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  6. Galarce, G. D., Foncea, R. E., Edwards, A. M., Pessoa-Mahana, H., Pessoa-Mahana, C. D. & Ebensperger, R. A. (2008). Biol. Res. 41, 43–50. [PubMed]
  7. Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. [DOI] [PMC free article] [PubMed]
  8. Gu, W., Miao, T.-T., Hua, D.-W., Jin, X.-Y., Tao, X.-B., Huang, C.-B. & Wang, S.-F. (2017). Bioorg. Med. Chem. Lett. 27, 1296–1300. [DOI] [PubMed]
  9. Kember, M. R., Knight, P. D., Reung, P. T. R. & Williams, C. K. (2009). Angew. Chem. Int. Ed. 48, 931–933. [DOI] [PubMed]
  10. Liao, P., Wang, D., Zheng, J. Q., Tan, H. W., Zheng, X. J. & Jin, L. P. (2016). RSC Adv. 6, 33798–33803.
  11. Manna, P., Seth, S. K., Das, A., Hemming, J., Prendergast, R., Helliwell, M., Choudhury, S. R., Frontera, A. & Mukhopadhyay, S. (2012). Inorg. Chem. 51, 3557–3571. [DOI] [PubMed]
  12. McKinnon, J. J., Jayatilaka, D. & Spackman, M. A. (2007). Chem. Commun. pp. 3814–3816. [DOI] [PubMed]
  13. Mitra, M., Manna, P., Bauzá, A., Ballester, P., Seth, S. K., Ray Choudhury, S., Frontera, A. & Mukhopadhyay, S. (2014). J. Phys. Chem. B, 118, 14713–14726. [DOI] [PubMed]
  14. Muslim, M., Ali, A., Kamaal, S., Ahmad, M., Afzal, M. & Plutenko, M. O. (2020). Acta Cryst. E76, 905–908. [DOI] [PMC free article] [PubMed]
  15. Nikolaevskii, S. A., Koshchienko, Y. V., Chernyshev, A. V., Burlov, A. S., Cheprasov, A. S., Aleksandrov, M. A., Kiskin, M. A. & Metelitsa, A. V. (2014). Koord. Khim. 40, 410–411.
  16. Podunavac-Kuzmanovic, S. & Cvetkovic, D. (2010). Rev. Roum. Chim. 55, 363–367.
  17. Seth, S. K. (2013). CrystEngComm, 15, 1772–1781.
  18. Seth, S. K., Saha, I., Estarellas, C., Frontera, A., Kar, T. & Mukhopadhyay, S. (2011). Cryst. Growth Des. 11, 3250–3265.
  19. Sharma, P., Reddy, T. S., Thummuri, D., Senwar, K. R., Kumar, N. P., Naidu, V. G. M., Bhargava, S. K. & Shankaraiah, N. (2016). Eur. J. Med. Chem. 124, 608–621. [DOI] [PubMed]
  20. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  21. Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8.
  22. Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8.
  23. Spackman, A. M. & Jayatilaka, D. (2009). CrystEngComm, 11, 19–32.
  24. Stoe & Cie (2002). X-AREA and X-RED32. Stoe & Cie GmbH, Darmstadt, Germany.
  25. Turner, M. J., McKinnon, J. J., Wolff, S. K., Grimwood, D. J., Spackman, P. R., Jayatilaka, D. & Spackman, M. A. (2017). CrystalExplorer17.5. The University of Western Australia.
  26. Wang, D., Zheng, J.-Q., Zheng, X.-J., Fang, D.-C., Yuan, D.-Q. & Jin, L.-P. (2016). Sens. Actuators B Chem. 228, 387–394.
  27. Xue, F., Luo, X., Ye, C., Ye, W. & Wang, Y. (2011). Bioorg. Med. Chem. 19, 2641–2649. [DOI] [PubMed]
  28. Zhou, T.-T., Zhang, D.-M., Li, J.-W. & Zhang, F. (2016). Z. Kristallogr. New Cryst. Struct. 231, 477–478.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989021003649/ex2042sup1.cif

e-77-00491-sup1.cif (658.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989021003649/ex2042Isup4.hkl

e-77-00491-Isup4.hkl (448.9KB, hkl)

CCDC reference: 2033195

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

RESOURCES