Abstract
Background:
Sea urchin embryos have been used for more than a century in the study of fertilization and early development. However, several of the species used, such as Strongylocentrotus purpuratus, have long generation times making them suboptimal for transgenerational studies.
Results:
Here, we present an overview of the development of a rapidly developing echinoderm species, Lytechinus pictus, from fertilization through sexual maturation. When grown at room temperature (20°C) embryos complete the first cell cycle in 90 minutes, followed by subsequent cleavages every 45 minutes, leading to hatching at 9 hours postfertilization (hpf). The swimming embryos gastrulate from 12 to 36 hpf and produce the cells which subsequently give rise to the larval skeleton and immunocytes. Larvae begin to feed at 2 days and metamorphose by 3 weeks. Juveniles reach sexual maturity at 4 to 6 months of age, depending on individual growth rate.
Conclusions:
This staging scheme lays a foundation for future studies in L. pictus, which share many of the attractive features of other urchins but have the key advantage of rapid development to sexual maturation. This is significant for multigenerational and genetic studies newly enabled by CRISPR-CAS mediated gene editing.
Keywords: larva, model organism, sea urchin, staging
1 |. INTRODUCTION
The diversity of animal form and function within the oceans provides a rich platform for biological discovery. Many marine organisms—including annelids,1 choanoflagellates,2 cnidarians,3 copepods,4 diatoms,5 echinoderms,6 oysters,7 sponges,8 and tunicates9 among others—have been used in the lab, leading to a long history of significant contributions coming from marine organisms.10–17 Echinoderms in general, and the sea urchin in particular, have played a foundational role in experimental embryology. Each female releases millions of eggs in a single spawning, fertilization occurs externally, eggs and embryos are large and relatively transparent, and development is rapid and synchronous in little more than a dish of sea water. In addition, mRNAs, guide RNAs, morpholinos, proteins, and small molecule reporters can be easily delivered into the egg by microinjection,6 facilitating the manipulation of developmental pathways.
The most frequently used urchin species is the purple sea urchin, Strongylocentrotus purpuratus. Several other species including Lytechinus variegatus, Paracentrotus lividus, and Hemicentrotus pulcherrimus are also used where they are more readily available. The genome of S. purpuratus was first of these to be published18 and the resulting resource19 has greatly contributed to the utilization of this species. However, there remain major limitations to the widely used echinoderm species in modern cell and developmental biology. Perhaps the most significant of these is their limited utility in multigenerational genetic studies, namely due to their long generation times. In the case of S. purpuratus the generation time is at least 11 months,20,21 and perhaps as long as 2 years for robust reproduction,20 making the generation of genetic lines a difficult prospect.
Lytechinus pictus (aka the white or painted urchin) is an attractive alternative to S. purpuratus. These urchins share most of the advantages of other urchins but, unlike species such as S. purpuratus, L. pictus have relatively short generation times of 4 to 8 months.22,23 In addition, they can be cultured at room temperature (20–22°C) and the adults have small body sizes (~1–4 cm test diameter). This rapid development and smaller adult size make the establishment of genetic lines (inbred and transgenic) an attainable goal.
L. pictus is native to the East Pacific Ocean, with a geographic range spanning from Central California to Cedros Island, Mexico.24 This species is approximately 40 million years diverged from S. purpuratus, and >200 million years separated from sea urchins of the genus Arabacia and the sand dollar Dendraster excentricus.25–27 L. pictus is an abundant urchin species and has been reported to live on sandy-bottoms and in sea grass bays,as well as in and kelp beds at depths between 2 m and 300 m.28 Originally thought to be a distinct species from Lytechinus anamesus, cross-fertilization between L. pictus and L. anamesus,29 and later molecular evidence from mitochondrial DNA and bindin,24 indicates that these are one species. In the laboratory, L. pictus live between 7 and 9 years, and grow to approximately 4 cm test diameter.23
Prior work on culturing of L. pictus laid a foundation for generating a standard staging scheme for this species.22,23 However, a gap in what is known is a detailed description of embryogenesis and larval morphogenesis useful for staging embryos. Here we provide updated and detailed imaging of a developmental staging scheme for L. pictus including key developmental events in embryogenesis such as early cleavage, blastula stages, and gastrulation, as well as summaries of later larval development, and postmetamorphic life history. We aimed to compare our staging scheme with the timing of development in S. purpuratus to assist in comparability across species. This staging scheme will help standardize work across labs and help establish spatial and temporal maps of major developmental events.
Glossary. Sea urchin terminology. List of important terms used in discussion of sea urchin development and morphology. Illustration depicts a Stage VI larva with some major morphological features labelled. This panel also shows the larval axes, and how larvae are oriented in subsequent figures
2 |. RESULTS
2.1 |. Early cleavage stages
L. pictus eggs (Figure 1A) average 110 μm in diameter and form a conspicuous fertilization envelope (Figure 1B) following the initiation of the cortical reaction at fertilization30 and coinciding with changes in the electrical potential of the egg.31 At 20°C, the first cell cycle takes 1.5 hours (Figure 1C) and two subsequent symmetric cleavages (Figure 1D,E) occur in the following 45-minute intervals (2.25 and 3 hpf). The fourth division, which forms the 16-cell embryo (Figure 1F), occurs at 3.75 hpf and is the first asymmetric cell division, giving rise to four macromeres and four smaller micromeres in early cleavage. Division of all the cells except the micromeres occurs next, at 4.5 hpf, yielding a 28-cell stage embryo (Figure 1G). The fifth cleavage gives rise to four micromeres and four small micromeres. The micromeres ultimately give rise to the primary mesenchyme cells (PMCs) which form the larval skeleton while the small micromeres are presumed to directly or indirectly contribute to formation of the germ line.32 Small micromeres of L. pictus have reduced efflux transporter activity33 which can be used to selectively load these cells with small molecule fluorescent substrates of transporters. By 5.75 hpf, the embryo is at the 60-cell stage (Figure 1H) and at this stage, septate cell junctions are beginning to form,34 which help segregate the contents of the blastocoel from the external environment.
2.2 |. Expansion of the blastocoel and gastrulation
The cavity between cells of the early embryo expands quite dramatically between the fifth and tenth cleavages, and between 6.5 and 7.5 hpf the embryo is in the early blastula stages (Figure 2A,B). The opening to the blastocoel is visible and a cluster of small micromeres, which have divided to a total of eight cells, reside at the vegetal pole of the embryo (Figure 2B, white arrow). The cavity of the blastocoel is more pronounced and changes in the morphology of the layer of cells from more rounded to an intermediate shape are apparent.
By 8 hpf the embryo is a mature blastula (Figure 2C) with cell shapes more akin to a regularly spaced, columnar epithelium. Nuclei are slightly closer to the basolateral membrane, and the vegetal pole cluster of small micromeres becomes more difficult to resolve. The blastulae are ciliated at this stage and spin within the envelope, eventually hatching by 9 hpf (Figure 2D). At this stage the cells at the vegetal pole will begin to thicken, forming a mesenchyme blastula stage embryo (Figure 2E) by 12 hpf. Signs of delamination and the ingression of a population of cells, the PMCs which give rise to skeletogenic cells35,36 (Figure 2F, white arrow), is evident by 15 hpf in L. pictus. This classic epithelial-mesenchymal transition ends the blastula phases and marks the subsequent onset of gastrulation.
Gastrulation of the embryo occurs in two main phases—primary and secondary invagination. Primary invagination is initiated following PMC ingression, when the thickened vegetal plate bends inward. This process is assisted in part by cues from bottle cells37,38 and micromeres.39 The majority of PMC ingression at the vegetal pole (Figure 3A) is completed by 17 hpf. Bending of the vegetal plate characteristic of primary invagination, and the arrangement of ingressed PMCs into an ordered ring (Figure 3B) begins at 18 hpf and is complete by 20 hpf. After primary invagination, a slight pause occurs before the pronounced elongation of the archenteron. At around 24 hpf, secondary invagination is well underway and the archenteron has begun to extend through the blastocoel; secondary mesenchyme cells (SMCs), which give rise to muscle and immune cell types such as pigment cells, are evident in the blastocoel and at the tip of the archenteron at this mid-gastrula phase (Figure 3C). The SMCs have long filopodia which are easily visible halfway through gastrulation. These filopodia extend toward the animal pole and can interact with surrounding cells.40 The subset of SMCs that will further differentiate into pigment cells are migrating through the blastocoel to later embed into the ectoderm. There are also distinct arrangements of PMCs into the triradiate skeleton. By late gastrulation (Figure 3D), at 30 hpf, the archenteron has crossed the space of the blastocoel and the arrangements of skeletogenic cells are clear and they have begun to form skeletal rods branching out from the origins of the triradiate (Figure 3D, white arrow). The primordial germ cells (PGCs) are presumed to migrate to the left and right coelomic pouches during later gastrulation and into the prism stage (Figure 3E, white arrows).
By 38 hpf embryos are at the late prism stage (Figure 3E) and mineralization of skeletal rods is apparent, while the archenteron has a more pronounced bend toward the oral side of the animal indicating it is nearly ready to fuse with the ectoderm to form the mouth. Compartmentalization and functional patterning of the larval gut is ongoing throughout gastrulation, though morphologically the gut is still very simple until later in development when it differentiates further into the tripartite fore-, mid-, and hindgut.
2.3 |. Larval development
The first larval stage of L. pictus is the pluteus stage (Figure 3F) which occurs by 2 days postfertilization (dpf). At this time the larvae have three distinct gut compartments, the esophagus, stomach, and intestine (corresponding to the former fore-, mid-, and hindgut).41 Larvae at 2 days will begin to filter feed phytoplankton such as Rhodamonas lens from the surrounding water. The larvae also have a population of conspicuous immunocytes termed pigment cells which contain granules of the autofluorescent pigmen echinochrome (Figure 3F, insets).
Subsequent larval development in sea urchins is divided up into stages based on the progression of key morphological features, such as the acquisition of additional pairs of arms, extension and differentiation of the left and right coeloms, formation of epaulettes and the vestibule, and elaboration of the rudiment structures.42 Additional staging schemes detailing later larval development focus primarily on the maturation of the rudiment with special attention to skeletal features and tissue organization of juvenile structures.43
In L. pictus, the majority of larvae are at Stage I (Figure 4A–I) at 3dpf. During this stage feeding is evidenced by the red digestive remnants of Rhodamonas in the stomach. Between Stage I and Stage II (Figure 4A-II), tthere is thickening of the tissue that eventually forms the oral hood (blue arrow, Figure 4A-II). The left and right coeloms extend along the stomach of the larva. The extension of the left and right posterodorsal arms during Stage III larvae (Figure 4A-III, yellow arrow) is apparent at 7 dpf. In L. pictus there is further elaboration of the oral hood and it extends to overhang the mouth. The tissue that forms the left and right preoral arms is not yet fully extended. There is mineralization of the skeletal rods that support the posterodorsal pair of arms, and evidence of invagination of the vestibule on the left side of the larva (Figure 4A-III, white arrow). The tissue which forms the vestibule folds inward toward the gut, where it will eventually meet the coelomic structures on the left side of the larva (Figure 4B-III, yellow dashed line).
As the posterodorsal arms continue to extend, initiation of the development of rudiment structures occurs, marking a Stage IV larva (Figure 4A-IV, white arrow). The early rudiment appears as a crescent-shaped structure adjacent to the gut (Figure 4B-IV, yellow dashed line). Cells that originally migrated to the left coelomic pouch during embryogenesis contribute to the rudiment, which matures into the body of the juvenile animal at metamorphosis. The completion of extension of the preoral arms is evident in a Stage V larva (Figure 4A–V, yellow arrow) which occurs between 10 and 12 dpf in L. pictus. The rudiment elaborates and organizes folds of tissue into a pentagonal disc (Figure 4B–V, yellow dashed line) as the larva develops into Stage V (Figure 4A–V, white arrow).
As the rudiment matures, three pedicellariae are formed which will be carried through metamorphosis (Figure 4A–V, grey arrows). These structures persist in a Stage VI larva (Figure 4A-VI) and precede the state known as competency at 3 weeks postfertilization (wpf). At the final stage (Stage VII) the larva contains a mature rudiment with five tube feet and mineralized spines that are tucked away within the larval body. The rudiment sits adjacent to the gut, and when the larvae are ready to undergo metamorphosis the gut turns a greenish color and the tissue acquires a scaled or textured appearance. Tube feet within the rudiment will extend and emerge from the larval body. The larvae bend the arms to the side and attach to the benthos during metamorphosis, allowing the body of the juvenile to emerge from the larva and an extensive tissue reorganization occurs44,45 which includes shedding of skeletal rods and resorption of larval arm tissue.
2.4 |. Juvenile development to adulthood
At 24 hours post-metamorphosis (hpm) the newly settled juvenile (Figure 5A) has 5 tube feet and 20 walking spines. The body of the animal typically contains a pale yellowish-green pigmented swirl, and sometimes remnants of larval tissue can be observed. This pigmented section, and the overall main body of the juvenile is freckled with red pigment cells retained from the larva. The pedicellariae from the larva are also retained. In newly metamorphosed animals, there are also 10 additional juvenile spines that are located on the aboral side. As juveniles continue to grow, they feed on diatoms and biofilms after formation of the teeth between 4 and 5 days postmetamorphosis (dpm). They will continue to develop additional tube feet and walking spines, the plates that form the test will start to fuse, and the structure of the anal plate becomes more apparent. By 4-months postmetamorphosis, the animal has a white to orange-ish appearance. The pigment cells that were once observed following metamorphosis are no longer visible. The animals eventually acquire a purple pigmentation at the base of the spines during their postmetamorphic growth period.
At 4 months, the range of body sizes for animals in our hands is between 1 and 15 mm in diameter, with growth rate post-metamorphosis being variable, even among siblings reared under identical conditions. Although sexual maturation appears a function of both age and size, we have been able to most reliably spawn animals that are 9 to 10 mm diameter, consistent with previous reports.23
3 |. DISCUSSION
3.1 |. Toward a unified echinoderm development staging scheme
This article provides an initial staging scheme for L. pictus. Knowing the precise timing of specification and differentiation of important cell populations is essential to being able to manipulate the embryo and provide a common language for discussion of development. Perhaps the most well-recognized standardized staging schemes come from Xenopus,46–48 zebrafish,49 and chick.50 Each of these vertebrate models has unique advantages and improved accessibility for studying specific processes in development such as nervous system development, regeneration, or formation of limb buds. Expanding on the available standardized staging schemes to include invertebrates helps to query processes less easily accessed in vertebrates. In the case of sea urchins these include fertilization, early cell divisions and gastrulation to name a few.
There have been numerous descriptions of the morphologies of other echinoderms including members of the genera Arabacia,51 Echinus,52 and Strongylocentrotus.53–55 Of these, S. purpuratus is arguably the species with the most detailed descriptions of early cleavages, and later larval development from feeding stages through metamorphosis.42,43 However, many of the existing descriptions are fragmentary, and do not capture all of development through the life cycle. Thus, there is need for standardized staging schemes spanning the entire life cycle, such as the one presented here.
Here we have shown that, like other echinoderms, the early stages of development in L. pictus occur rapidly and synchronously. There are limited morphological differences of L. pictus in comparison to S. purpuratus, the key divergence focuses on timing of important developmental structures and processes. The first asymmetric cleavage, forming the micromeres, occurs by 3.5 hpf, small micromeres form by 5.75 hpf, and hatching happens in 9 hours in L. pictus. By comparison, it takes S. purpuratus 2 to 2.5 hours for the first cell division, 6.5 hours to reach the first asymmetric division forming the micromeres, and 27 hours to hatch from the fertilization envelope when cultured at 12°C.56 Thus, experiments pertaining to early development can be completed in the course of a single day in L. pictus.
Progression through the larval period for L. pictus also occurs more rapidly and follows the progression of major events and development of core morphological structures that is observed in S. purpuratus, but in half the time. For example, feeding for L. pictus begins by 2 days, whereas feeding of S. purpuratus occurs at 4 days.42 The extension of the left and right posterodorsal arms during Stage III larvae is apparent at 7 dpf. In S. purpuratus this stage is achieved at the earliest 18 dpf, but can take as long as 28 days.42 The completion of extension of the preoral arms is evident in a Stage V larva between 10 and 12 dpf in L. pictus. To reach an equivalent stage in S. purpuratus takes 25 to 35 days.42 Metamorphosis of L. pictus occurs at 21 days, compared to between 40 and 80 days in S. purpuratus.42,56
Echinoderms with similar developmental tempos include the Panamanian populations of L. variegatus which have generation times on the order of 6 to 8 months,57 comparable to L. pictus. Temnopleurus reevesii can also achieve maturity between 6 and 10 months58 under optimal conditions, making its generation time similar to L. pictus. Those working with Paracentrotus lividus have started to compile similar staging schemes59 and it may also have comparable generation times of approximately 5 months to earliest gamete production.28 However, the prevalence of L. pictus on the West Coast of the United States, the optical transparency of their eggs, the ability to culture at room temperature (20°C), and the smaller adult body sizes all lend to preference for this species in our hands.
3.2 |. Conclusions: Historical and future contributions from research in L. pictus
There have already been a number of important contributions from L. pictus, most notably in the study of fertilization and early embryogenesis. For example, activation of L. pictus and S. purpuratus eggs with ionophores, and the resulting observations of respiration and protein synthesis provided evidence that egg activation was independent of extracellular ions and dependent on the release of intracellular calcium.31,60 The dynamics of the endoplasmic reticulum (ER) membrane at fertilization was first described in the eggs of L. pictus.61 Some of the first promoters studied in sea urchins were the metal-responsive elements and regions upstream of metallothionein (MT1) in L. pictus.62,63 Sea urchins, including L. pictus, were widely used in the early studies of mRNA translation and protein synthesis in early development.64–66 This included the early work of Nemer and colleagues demonstrating that a diverse array of mRNAs stored in the egg of L. pictus encode the newly synthesized proteins of the early embryo.67 L. pictus were also used in landmark studies on the cell cycle showing changes in calcium concentration during migration of the pronuclei, the breakdown of the nuclear envelope, during the transition between metaphase and anaphase, as well as during cleavage.68
Gene editing has now become widespread in marine organisms, including sea urchins.69–73 During this “CRISPR era”74–76 the ability to rear juveniles, generate lines58 and investigate later life developmental impacts resulting from early events in embryogenesis is going to be of increasing importance. The comparatively short generation time of L. pictus enables opportunities to create inbred lines of animals with reduced variability and stable genetic backgrounds for manipulation. The growing collection of community resources for working with L. pictus also make targeted molecular and genetic studies achievable. This includes a transcriptome and fully sequenced genome that will soon be publicly available.77 This would provide a pathway to target ubiquitous genes in specific cell types, or to study longer-term consequences of the environment through action on development. Understanding of ecological and evolutionary development of L. pictus could strengthen our understanding of the processes that control development across echinoderms.
4 |. EXPERIMENTAL PROCEDURES
4.1 |. Culturing of Larvae
Adult animals were spawned by injection of 100 to 150 μL of 0.55 M KCl through the peristomal membrane. Females were inverted and kept submerged in filtered sea water (FSW) during spawning, and sperm was collected undiluted and kept at 15°C until use. Eggs were washed 6 to 10 times with FSW and visually examined for quality before fertilization. Eggs were fertilized using 2 to 3 drops of a fresh sperm dilution (2 μL semen into 40 mL FSW). Eggs were checked for fertilization success, where only batches of eggs with >98% successful fertilization were used. Embryos were grown with agitation at room temperature (20°C) as previously described.77 Briefly, embryos were grown in FSW at a concentration of 1 embryo per mL until hatching from the fertilization envelope. Upon hatching, embryos were further diluted to a concentration of 1 embryo per 3 mL. Larvae were fed the red flagellated algae Rhodamonas lens starting at 2 days postfertilization (dpf) and received water changes 3 to 4 times a week through gentle reverse filtration. Larval health was checked visually throughout development (more frequently during embryonic stages, and on a daily basis during larval development). Cultures with >10% of larvae displaying signs of stress or poor health (ie, asymmetry, exposed skeletal rods, prolapse of the gut), were discarded. Healthy larvae were observed and imaged as described below. Metamorphosis was induced by a 60-minute exposure to 50 mM excess KCl in FSW, followed by 6 washes with FSW. Competent larvae were left to recover from the KCl exposure in culture vessels at 20°C with no agitation overnight. Metamorphosed juveniles were carefully transferred using a trimmed transfer pipette to petri dishes with natural biofilm growth and the diatom Nitzschia alba. Water changes occurred daily for juveniles, and they were observed daily for changes in morphology and growth.
4.2 |. Observation and live imaging of development
Embryonic sea urchin development was observed, and successive cell divisions were timed under temperature control at 20°C. Embryos were imaged from fertilization through the early pluteus stage on a Zeiss LSM 700 confocal microscope (Jena, Germany) with a 20× objective using differential interference contrast (DIC). Images were captured using the Zen software suite, and micrograph measurements were added using ImageJ (National Institutes of Health, Bethesda, Maryland). Composite DIC images were rendered from z-stacks of animals at the 8-cell stage, at late gastrulation, and at the prism and pluteus stages using Helicon Focus Pro Unlimited (v6.8.0, Helicon Soft Ltd.). Upon reaching the pluteus stage, larvae were imaged daily and scored for the number of arms present, and the development of the coelomic structures. There is reduction in synchrony of development at the onset of feeding. Therefore, we defined a developmental milestone as a time range averaged across multiple batches of larvae, where >85% of individuals had progressed to a developmental stage defined by morphological features (Figure 6).
Images of the larvae were captured using a 10× objective on a Zeiss Stemi 2000-C microscope with an AxioCam ERc 5. Z-stacks of all larval stages were focus stacked using Helicon Focus Pro Unlimited (v6.8.0, Helicon Soft Ltd.). Larval Stages IV-VI were tiled, as well as focus-stacked. Imaging of the progression of internal larval structures was taken on a Zeiss LSM 700 microscope usinga 20× 0.8 NA plan-apo objective with DIC optics. Juveniles were imaged live using a Leica M165F high magnification stereomicroscope with a Canon EOS 60D camera. A standard scale with 1 mm increments was used to measure postmetamorphic animals at each magnification imaged. The adult animals were imaged with a Canon EOS 60D camera. We focused our observations on cell populations of particular interest for developmental biologists including the small micromeres which later give rise to PGCs,32,33,78,79 PMCs which contribute to skeletogenesis,35,36,80 and SMCs81 which later differentiate into immune cell populations as part of the larval and adult innate response.82,83
ACKNOWLEDGMENTS
The authors thank Patrick Leahy for his suggestions on culturing optimization and larval rearing, and Andy Cameron for insight on staging of larvae. We would also like to thank Vic Vacquier and fellow members of the Hamdoun Lab for discussion of this manuscript. We gratefully acknowledge Kathy Le, and Kasey Mitchell for their assistance with larval care and animal husbandry throughout this study. This work was supported through a Diversity Supplement for KTN through NIH ES027921 as well as NIH ES030318 and the NSF 1840844 awarded to AH.
Funding information
National Institutes of Health, Grant/ Award Numbers: ES027921, ES030318; National Science Foundation, Grant/ Award Number: 1840844
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