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. 2018 Mar 6;140(11):4182–4184. doi: 10.1021/jacs.8b01661

Correction to “Synthetic, Functional Thymidine-Derived Polydeoxyribonucleotide Analogues from a Six-Membered Cyclic Phosphoester”

Yi-Yun Timothy Tsao, Karen L Wooley
PMCID: PMC8154422  PMID: 29510033

There are mistakes in the stereochemical structures for (R)-5 and (S)-5 in the original manuscript in the Abstract graphic, Scheme 1, Scheme 2, Figure 2, Figure 3, Table 2, and the Supporting Information (the chemical structures are shown here as original and corrected structures in Chart 1). These changes do not affect any of the conclusions. The corrected abstract graphic, figures, schemes, and tables are shown below. The corrected structures are provided in the revised Supporting Information. We apologize to the reader for any inconvenience.

Scheme 1. Synthetic Route from Thymidine to Monomer 5.

Scheme 1

Scheme 2. Polymerization of 5 with 4-Methoxybenzyl Alcohol as the Initiator and TBD as the Catalyst.

Scheme 2

Although the polymer is illustrated with only one regiochemistry and no stereochemistry, 31P NMR spectra suggested that the polymers contained regioisomeric and diastereoisomeric repeat units.

Figure 2.

Figure 2

Reaction coordinate diagram of using DMAP as activator to promote cyclization of 6 at the B3LYP/6-31+G* level of theory.

Figure 3.

Figure 3

Use of 1D-NOESY to identify the diastereomers (a) (S)-5 and (b) (R)-5, with atomic distances of 6.6 and 4.2 Å, respectively, calculated from DFT geometric optimization at the B3LYP/6-31+G* level of theory.

Table 2. Condition Screening for Cyclization of 6 with 7 Using Various Solvents and Bases at −78 °C.

graphic file with name ja8b01661_0006.jpg

entry solvent base result yield (%) (R)/(S)a
1 THF Et3N oligomerization    
2 THF pyridine oligomerization    
3 THF DMAP oligomerization    
4 THF DIPEA oligomerization    
5 DMF Et3N oligomerization    
6 DMF pyridine oligomerization    
7 DMF DMAP oligomerization    
8 DMF DIPEA oligomerization    
9 CH2Cl2 Et3N no reaction    
10 CH2Cl2 pyridine no reaction    
11 CH2Cl2 DMAP cyclization 58 88:12
12 CH2Cl2 DIPEA cyclization 4 8:92
a

The (R)/(S) ratio was determined by 31P NMR of reaction crude.

Chart 1. Original and Corrected Chemical Structures of (R)-5 and (S)-5.

Chart 1

graphic file with name ja8b01661_0007.jpg

Acknowledgments

We thank Yelena Lipskerova of Chemical Abstracts Service for drawing our attention to the mistakes in the stereochemical assignments of the chemical structures.

Supporting Information Available

The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/jacs.8b01661.

  • Experimental procedures, spectroscopic data for all new compounds including 1H, 13C, and 31P NMR spectra, TGA, DSC, and details of computational chemistry (PDF)

Supplementary Material

ja8b01661_si_001.pdf (2.1MB, pdf)

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

ja8b01661_si_001.pdf (2.1MB, pdf)

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