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. 2021 Jul 27;16(7):e0254925. doi: 10.1371/journal.pone.0254925

The Mean Unfulfilled Lifespan (MUL): A new indicator of the impact of mortality shocks on the individual lifespan, with application to mortality reversals induced by COVID-19

Patrick Heuveline 1,*
Editor: Bernardo Lanza Queiroz2
PMCID: PMC8315782  PMID: 34314459

Abstract

Declines in period life expectancy at birth (PLEB) provide seemingly intuitive indicators of the impact of a cause of death on the individual lifespan. Derived under the assumption that future mortality conditions will remain indefinitely those observed during a reference period, however, their intuitive interpretation becomes problematic when period conditions reflect a temporary mortality “shock”, resulting from a natural disaster or the diffusion of a new epidemic in the population for instance. Rather than to make assumptions about future mortality, I propose measuring the difference between a period average age at death and the average expected age at death of the same individuals (death cohort): the Mean Unfulfilled Lifespan (MUL). For fine-grained tracking of the mortality impact of an epidemic, I also provide an empirical shortcut to MUL estimation for small areas or short periods. For illustration, quarterly MUL values in 2020 are derived from estimates of COVID-19 deaths that might substantially underestimate overall mortality change in affected populations. These results nonetheless illustrate how MUL tracks the mortality impact of the pandemic in several national and sub-national populations. Using a seven-day rolling window, the empirical shortcut suggests MUL peaked at 6.43 years in Lombardy, 8.91 years in New Jersey, and 6.24 years in Mexico City for instance. Sensitivity analyses are presented, but in the case of COVID-19, the main uncertainty remains the potential gap between reported COVID-19 deaths and actual increases in the number of deaths induced by the pandemic in some of the most affected countries. Using actual number of deaths rather than reported COVID-19 deaths may increase seven-day MUL from 6.24 to 8.96 years in Mexico City and from 2.67 to 5.49 years in Lima for instance. In Guayas (Ecuador), MUL is estimated to have reached 12.7 years for the entire month of April 2020.

Introduction

For months, the numbers of deaths from the novel coronavirus disease 2019 (COVID-19) have become part of the daily news cycle the world over. Even when related to the population size in deaths per capita ratios, however, these numbers do not really provide any intuition for the magnitude nor the dynamics of the pandemic. Quite useful for between-population comparisons, the age standardization of these ratios does not make them more easily interpretable.

The period life expectancy at birth (PLEB) is probably the most readily interpretable of the period indicators mortality. Translating a number of deaths from a given cause into its impact on PLEB involves multiple steps but is fairly straightforward [1, 2]. Unfortunately, the intuitive appeal of the PLEB, its interpretation as a measure of the individual lifespan, derives from the assumption that period mortality conditions will continue to prevail indefinitely. Mortality conditions are always changing, but when these changes are relatively steady, changes in PLEB remain interpretable as changes in individual longevity [3]. When declines in PLEB are induced by a relatively rapid and likely temporary increase in mortality, such as currently experienced with the COVID-19 pandemic, however, they become hardly interpretable as indicators of changes in the individual lifespan [4].

The interpretation is even more problematic when PLEB or changes therein are estimated for smaller populations and shorter periods of time. Tracking the pandemic at a finer-grained geographical and temporal scale undoubtedly provides better insights on the pandemic than annual, national averages [57]. But while the assumption underlying an annual PLEB estimate—that mortality conditions of a given year will be repeated year after year in the future—may seem unlikely, the seasonality of mortality makes the indefinite repetition of the mortality conditions in any fraction of a year plainly impossible. Referring to mortality conditions not only in a short period but also in a small area, these “pseudo” PLEB estimates [8] build on assumptions akin to a Groundhog-Day [9] time loop repeating itself in a small area from which individuals are unable to leave.

Aware of the pitfalls of interpreting changes in PLEB at the individual level, demographers may only provide them as macro-level measures of mortality shocks across time and place, but their widespread misinterpretation during the COVID-19 pandemic reveals the lack of a both interpretable and scalable, over space and time, measure of what changing mortality conditions mean for the individual lifespan. This article proposes such a measure, the Mean Unfulfilled Lifespan (MUL). Making no assumption about future mortality, the MUL translates past changes in mortality into an average difference in the length of lived lives. That difference is obtained by comparing the actual average age at death during a given period and the expected ages at death of the same individuals (death cohort) in the absence of mortality changes, whether induced by a specific cause of death or by an event affecting multiple causes of death. The MUL remains interpretable for populations of any size and for periods of any length, and can be estimated from data on excess deaths or cause-specific deaths, as illustrated here with quarterly COVID-19 mortality data. The MUL also equals the product of (1) the proportion of deaths in a population and given period from a cause or due to an event of interest and (2) a weighted average of counterfactual life expectancies by age and sex in the absence of that cause or event of interest, with weights provided by the distribution of deaths from that cause or due to that event of interest in the population and given period. In the case of COVID-19, I show that for a given population the value of that weighted average only changes very slowly over time, providing an easy short-cut for fine-grained tracking of the impact of pandemic on the individual lifespan.

Conceptual detour

Assessing PLEB reductions induced by a specific cause or event requires two period life tables, one representing the prevailing mortality conditions and another one representing the counterfactual mortality conditions expected in the absence of that cause or event. The assessment involves a relatively copious amount of life table manipulations, but decades ago Nathan Keyfitz provided most useful insights as to what these manipulations boil down to. Considering the related issue of estimating the increase in PLEB brought by the permanent elimination of a cause of death, he summarized that the increase “depends on the average time that elapses before the persons rescued will die of some other cause” [10]. Conversely, the decrease induced by a new cause of death depends on the average time that would have elapsed before the persons who died from the new cause would have died from other causes.

This average time can be derived from the synthetic cohort approach modelled in the period life table where each death at age a from a cause C, dC(a), reduces the number of person-years lived by the life expectancy at age a in the absence of that new cause, eo-C(a). This commonly assumes that persons dying from the new cause would have had the same life expectancy in the absence of that cause as same-age persons who survived that cause. This common assumption may appear unlikely, and interactions between causes of death can be incorporated instead, but the data requirements are substantial. Under the common assumption, the difference in PLEB is thus the average over all members of the synthetic cohort, l0 (the radix of the life table), of the difference in person-years lived by cohort members:

ΔPLEB=1l0.0ω(dC(a).eoC(a))da (1)

Keyfitz’ insight relates to the concept of “potential years of life lost” [11] developed a couple of decades earlier still. The initial approach, designed to measure premature mortality, compared ages at death to a fixed value (70 or 75 years) [12]. This approach is not suited to study cause of deaths at older ages since deaths at ages above the fixed value are not considered [13]. In burden-of-disease assessments, it has become customary to estimate Years of Life Lost (YLL) as:

YLL=0ω(DC(a).eo*(a))da (2)

where DC(a) is the number of deaths from a certain cause C at age a observed in the population during a reference period and eo*(a) is life expectancy at age a in a counterfactual life table. YLL to COVID-19 have been estimated using this approach [1416].

Three differences between the two above equations can be observed. First, YLL are estimated from actual numbers of deaths by age rather than from numbers of life table decrements. This implies that the YLL estimate is sensitive to the age distribution of the population, as in turn it affects the distribution of deaths by age. While the PLEB is not properly speaking an age-standardized measure [17], it equals the inverse of the “stationary” death rate, that is, a weighted average of the period age-specific death rates with weights derived from these death rates through life table construction. Using these internally derived weights rather than an external, standard age distribution, the stationary death rate and PLEB are independent of the actual age composition of the population. This relative advantage of the difference in PLEB comes at the cost of using a “stationary” age distribution of deaths, however, represented by the life table decrements that result from indefinitely subjecting the population to the mortality conditions of the period. As discussed in the introduction, this assumption is precisely what is problematic for studying the impact of a mortality shock or an emerging disease such as COVID-19. Moreover, the actual distribution of deaths can be used in a population of any size and periods of any length, allowing for the mortality impact to be tracked on short temporal and small spatial scales for which interpreting differences in PLEB hardly makes sense.

The second difference refers to the counterfactual life expectancies. In global burden-of-disease assessments, a universal life table representing optimal survival conditions is typically used. This has the advantage of making YLL for different populations additive—allowing for the derivation of a global estimate of YLL due to a cause by simple summation. However, using a universal life table may misrepresent the actual gains from averting a death in a specific population.

The last difference concerns the denominator, or lack thereof in YLL. Unnecessary for comparisons between different causes of death in the same population, for which YLL was initially intended, the introduction of a denominator is required for meaningful comparisons across populations [18]. At least three denominators for the YLL can be found in the literature. The first one is the total number of years that can be expected to be lived by members of the population, of which YLL is a fraction. That fraction is thus a ratio of death over population size, with both deaths and population members weighted by life expectancies at their respective ages. This yields a coherent measure with potential years lived in both the numerator and the denominator, but not one that can be interpreted in terms of individual longevity (in years per person). Another denominator is the total population size, which yields a ratio in years person. The corresponding ratio is a less coherent measure, however, as it includes in the denominator all the individuals in the population, including many that survived the mortality shock and do not contribute to YLL in the numerator. In turn, this complicates providing a precise interpretation for the value of YLL per capita. A third denominator is the number of deaths from the cause of interest in the population during the reference period. This yields an average YLL (AYLL) per such deaths, DC:

AYLL=0ω(DC(a).eo*(a))daDC=0ω(DC(a)0ωDC(a)da).eo*(a)da (3)

The AYLL thus represents the average (universal) life expectancy of the population members who died from the specific cause during a given period. On the one hand, it is a coherent measure as its denominator now includes only the population members who died and contributed to lost years in the numerator. On the other hand, it is only a function of the distribution of deaths by age, irrespective of the prevalence of that cause of death. The AYLL thus cannot provide a measure of the intensity of a mortality shock.

Considering the advantages and limitations of the extant measures, I propose to add one measure of the mortality impact of a cause of death or an event on the individual lifespan. This measure, the Mean Unfulfilled Lifespan (MUL), is intended for situations where the underlying assumptions of PLEB might be implausible, and thus based, as the estimate of YLL, on actual numbers of deaths in a population during a period rather than on life table decrements. To retain its intuitive interpretation, however, the MUL is structured like the difference in PLEB as summarized by Keyfitz and, using counterfactual life expectancies representing the mortality conditions in the population of interest, similarly expressed as an average difference in person-years lived per person. Since the life table radix, l0, equals the sum of all decrements at all ages, the structural equivalence is maintained by defining the MUL as:

MUL1D.0ω(DC(a).eoC(a))da (4)

where D is the total number of deaths (from all causes at all ages) during the reference period.

This intuitive interpretation of the MUL can be derived by rewriting this defining equation as:

MUL=0ω((DC(a).(a+eoC(a)a))+(DC(a).(aa)))da0ω(DC(a)+DC(a))da=0ω((DC(a).(a+eoC(a)))+(DC(a).a))da0ω(DC(a)+DC(a))da0ω((DC(a)+DC(a)).a)da0ω(DC(a)+DC(a))da (5)

where D-C(a) is the number of deaths from all causes but C at age a observed in the population during the reference period. The second term represents the average age at death in a given period. If we assume that individuals who die of other causes than C die at the same age as they would have in the absence of cause C (no indirect effect of cause C on other causes of death), and that individuals who die of cause C at age a would have otherwise lived to age a+e(a), the first term represents the average expected age at death of the same individuals in the absence of cause C. The difference between the average age at death in the population during a given period and the average expected age at death of the same individuals in the absence of cause C, the MUL can thus be interpreted as a measure of premature mortality for an average person dying in a population and during a period of interest.

The assumption that cause C has no indirect effect on other causes of death is actually not required. As will be shown below, one can also derive the MUL from data on all deaths, and distinguishing between deaths that, based on counterfactual “benchmark” mortality conditions, were expected to occur in that period and those that were not, use the latter number of “excess” deaths instead of deaths from a specific cause. Finally, note that the MUL differs from changes in average ages at death across periods, which can be readily measured but may actually be positive with the emergence of a new cause of death if that cause affects people who are older on average that those dying from other causes. To sum up this conceptual detour, the MUL complements existing indicators of the impact on the individual lifespan of a cause of death by providing a measure of the average potential years of life lost to a specific cause of death, or to any mortality shock, for all population members dying in a certain period, regardless of their cause of death.

Empirical shortcut

Calculating the MUL for small geographical areas and short periods is not conceptually problematic since it captures the actual length of lives that ended there and then, unlike differences in life expectancies whose interpretation in terms of reduced longevity requires assumptions about future conditions. The demand on data (including a separate counterfactual life table for each population of interest) is substantial, however, and the life table manipulations are not particularly straightforward.

To simplify the estimation, the MUL can be rewritten as:

MUL=DCD.0ωDC(a).eoC(a)daDC=DCD.PAYLL (6)

The second term is similar to the AYLL in Eq (3), but again based on population-specific, counterfactual life expectancies instead of a universal one, and is termed here the Population AYLL (PAYLL) to underscore that difference. In a given population, the PAYLL is a weighted average of counterfactual life expectancies that are estimated from prior conditions. While these do not change over time., their weights are the ratios:

DC(a)DC=MC(a).N(a)MC.N=MC(a)MC.N(a)N (7)

where MC and MC(a) are the all-age death rate and the death rate at age a from a specific cause, and N and N(a) are the total population size and number of individuals at age a in the population. These weights should also be expected to vary little within short periods because their values depend on the population composition, N(a)/N, and on the age pattern of cause-specific death rates, MC(a)/MC, both of which should vary little within short periods.

This suggests that the value of PAYLL can be expected to only change slowly over time and to be relatively close across populations with similar life expectancies and population compositions. MUL values for a sub-population or during a sub-period can then be approximated as the product of the PAYLL for the whole population or the entire period and the time-varying all-age ratio of deaths from a specific cause to all deaths, DC/D, in the sub-population or during that sub-period. As noted above, this can be readily extended to any mortality shock, with data on excess deaths and all-cause deaths.

Materials and methods

Methods

The equations defining YLL and the MUL appear deceivingly simple. To implement them, one has to apply estimates of life expectancies, which refer to exact ages, to numbers of deaths that are available or can be estimated only for age intervals. The varying value of life expectancy on a closed age interval is typically approximated by linear interpolation [19], in which case the contribution of the closed age interval between ages x and x+n to the MUL equals:

0nDC(x+a).eoC(x+a)daD=nDxCD.eoC(x+naxC) (8)

where nDxC is the number of individuals between ages x and x+n who died of cause C during the reference period and naxC is the average number of years lived after age x by these individuals. In turn, life expectancy at exact age x+naxC can be derived by linear interpolation between the values of life expectancy at ages x and x+n.

The linear interpolation is more problematic for wider the age intervals and for older age groups. In the 2018 US life table for males for instance [20], life expectancy declines by 2.9 years between ages 75 and 80 and by 2.4 years between ages 80 and 85. In this case, the linear approximation over-estimate life expectancy in the interval. The average number of years lived after age 75 by individuals dying between ages 75 and 85 is 5.4 years, and linear interpolation would yield a life expectancy at age 80.4 years of 8.5 years, whereas life expectancy has already dropped to 8.4 years at age 80.

This upward bias is particularly undesirable if individuals dying of the cause(s) of interest might be expected to suffer from other long-term conditions that would increase their risk of mortality from other causes. For COVID-19 victims, for instance, a correctly estimated life expectancy for their exact age would already over-estimate their potential years of life lost by ignoring well-documented “co-morbidities”. As for the open-ended interval, linear approximation requires setting a somewhat arbitrary upper age limit. Relatively minor for premature mortality at relatively young ages, these issues make linear approximation more problematic to apply when the cause(s) of interest affect older individuals. In the case of COVID-19 deaths for instance, close to 60% of these deaths were above age 75 years (Fig 1) and reported in just one ten-year closed interval (75 to 84 years) and one open age interval (over 85 years).

Fig 1. Distribution of provisional COVID-19 death counts, by sex- and age-groups, USA as of 5/13 (54,860 deaths), 7/1 (112,223 deaths), 9/30 (194,087 deaths) and 12/30 (301,671 deaths).

Fig 1

Source: Centers for Disease Control and Prevention (CDC).

In this respect, working with all deaths in a given period rather than with deaths from a specific cause of interest presents an important empirical advantage in addition to the benefit of assessing both the direct and the indirect effects of that cause of death. Using all deaths in a closed age interval between ages x and x+n, nDx, one may first calculate the contribution to the MUL of the deaths that were expected to occur under the counterfactual mortality conditions, nDx-C. For these deaths, the difference in length of life averages to the difference between the average number of years lived in the age interval under the prevailing conditions, nax, and under the counterfactual conditions, nax-C. The advantage of this approach is that setting an arbitrary upper value for the open-ended age interval becomes unnecessary. Having already reached age N, all the individuals who died in the open age interval in the period would all have been expected to die in the same open-ended age interval under the counterfactual mortality conditions, albeit not necessarily in that same period. For all the open-interval deaths over age N, DN+, the difference in length of life thus averages to the difference between life expectancy at age N under the prevailing conditions, eo(N), and under the counterfactual conditions, eo-C(N). With this approach, only the issue of estimating the average reduction in length of lived lives on closed age intervals from values of life expectancies that vary on these age intervals remains, and pertains to “excess” deaths, nDxnDx-C.

An alternative to linear interpolation derives from the fact that an individual’s expected length of life (eo(x)+x) gradually increases with age x. Life expectancy at any age is thus larger than the difference between life expectancy at an earlier age and the difference between the two ages:

0nD(x+a).eo(x+a)da>0nD(x+a).(eo(x)a)da=nDx.(eo(x)nax) (9)

Applying this approximation to excess deaths on any closed age interval will induce some underestimation of the average life expectancy of individuals dying on the interval. As discussed above, however, this may be preferable to the overestimation induced by linear interpolation in situations where ignoring co-morbidities is likely to already entail some over-estimation of potential years of life lost.

Adding the contributions of the different types of deaths yields:

MUL1D.(x=0,nNnnDxC.(naxCnax)+(DN+.(eoC(N)eo(N)))+x=0,nNn(nDxnDxc).(exocnax)) (10)

Rearranging the sums corresponding to the closed age intervals and using the multiple-decrement life table relationship eo(N)/ eo-C(N) = D-CN+/DN+, this can be rewritten as:

MUL1D(x=0,nNn(nDx.(naxCnax)+(nDxnDxC).(exoCnaxC))+((DN+DN+C).eNoC)) (11)

Materials

To illustrate the alternative approximation in Eq (11), I estimate quarterly MUL in the last three quarters of 2020 and the first quarter of 2021 in different national and sub-national populations. This requires for each of these populations life table values of exo-C and nax-C corresponding to survival conditions in the absence of COVID-19 whose. Combined with the number of individuals by sex and age-group, the life table values of age-specific death rates, nmx-C, then provide the expected numbers of deaths nDx-C in the absence of COVID-19. National population by age and sex as of July 1, 2020 and life table functions for 2015–20 and 2020–25 were obtained from the UN Population Division [21]. From these, linear and exponential interpolation yielded counterfactual nmx-C and npx-C values, from which exo-C and nax-C were then derived using life table relationships. Population data and life tables for sub-national populations in Italy, Mexico, Peru and the US were obtained from national statistical agencies [2227].

New population exposure and life tables representing actual mortality conditions (with COVID-19) were derived for each quarter to provide the corresponding values of nax. The construction of these life tables requires quarterly numbers of deaths by sex and age-group, nDx [28]. In countries where vital statistics are incomplete not available yet, but estimates of COVID-19 deaths are available, these numbers, nDx, can be obtained by adding estimates of COVID-19 deaths to the counterfactual number of deaths in the absence of COVID-19, nDx-C, through a multi-decrement life table to adjust for competing risks of deaths. When estimates of COVID-19 deaths are not broken down by sex and age-group, an alternative is to use a reference set of age-and-sex death rates from COVID-19 from another population for which these rates are deemed reliable [29]. Centers for Disease Control and Prevention (CDC) data for the USA in 2020, the country with the largest number of COVID-19 deaths in 2020, were used here as the reference set of age-and-sex death rates from COVID-19 [30]. Data on COVID-19 deaths by sex and age-group from Brazil [31] and the Netherlands [32] were used to investigate the results sensitivity to this assumption and to the CDC’s age groupings.

Quarterly MUL and PAYLL were estimated from number of COVID-19 deaths by March 31, June 30, September 30 and December 31, 2020, and March 31, 2021 for national and sub-national populations provided by the John Hopkins’ Coronavirus Resource Center [33]. Daily values from the same source were also used to illustrate the short-cut in Eq (6). Another application of Eq (6) for small-area populations used data on the monthly number of deaths by province in Ecuador [34].

All of these data are publicly available and were downloaded from institutional websites. Full results and sensitivity analyses are provided in Excel spreadsheets in the Supplementary Files. R routines and intermediate data files (e.g., counterfactual life tables) are available on a Github repository (heuveline/ind-comp-mort).

Results

Fig 2 shows quarterly MUL for both sexes combined in four selected sub-national populations: Lombardy (Italian Region), New Jersey (US State), Mexico City (Mexican State), and Lima (Peruvian Department). These populations were selected to illustrate trends in MUL because they have comparable population sizes (in the of order of 10 million) and belong to regions of the world that the pandemic reached at different times. Quarterly MUL illustrate the peaking of a first wave of COVID-19 deaths in Lombardy, New Jersey and Mexico during the second quarter of 2020. While in the third and fourth quarter a decline and rebound are clear in Lombardy and New Jersey, the trend was comparatively flat in Mexico City. A second wave peaked in the last quarter of 2020 in Lombardy, but continued to develop into the first quarter of 2021 in New Jersey and Mexico City. As measured by MUL, the two waves had comparable impact on the individual lifespan in Lombardy, but the second wave was less impactful than the first in New Jersey whereas it was the opposite in Mexico City. In Lima, the trend appears to be the reverse of that of Lombardy. The first wave peaked in the third quarter of 2020 and the second wave began in the first quarter of 2021.

Fig 2. Quarterly Mean Unfulfilled Lifespan (MUL) for both sexes, in years, selected populations.

Fig 2

For a finer-grained representation of the temporal trend within a time period, Eq (6) can be used with the assumption that PAYLL are population specific but invariant over that period. The estimated quarterly PAYLL (see S1 Table) confirm the variations across populations, from a low of 9.6 years in Bulgaria to a high of 26.1 years in Qatar. These differences can be explained by different age compositions, with younger compositions giving more weight to remaining life expectancies at younger ages, which are higher. As expected, however, in any given population, PAYLL changes relatively little from one quarter to the next. Building on this, Fig 3 shows MUL for a rolling seven-day period, derived from daily numbers of COVID-19 deaths and second-quarter PAYLL in Lombardy, New Jersey and Mexico City, from mid-March to mid-July 2020. First-wave peak MUL were reached at the end of March in Lombardy (6.43 years), three weeks later in New Jersey (8.91 years) and not until early June in Mexico City (6.24 years).

Fig 3. Seven-day Mean Unfulfilled Lifespan (MUL) for both sexes, in years, selected populations.

Fig 3

Eq (6) can also be used to approximate MUL for small populations for which life table functions might not be available, by “borrowing” the PAYLL from a larger population. This can be illustrated for the province of Guayas, Ecuador, where the monthly numbers of deaths show a marked increase in March, April and May. From a baseline of 1,700–2,000 per month in January, February and again in June, the number of deaths in April reached 12,425. This indicates that 85.2% of deaths in that month might be considered “excess” death. Based on this ratio and the second-quarter PAYLL derived for Ecuador (14.9 years, S1 Table), Eq (6) suggests that individuals died 12.7 years younger, on average, that their expected age at death in April in the province of Guayas. Illustrating the intensity of the mortality shock in Guayas, this monthly MUL is substantially larger than even the peak seven-day MUL shown in Fig 3 for Lombardy, New Jersey and Mexico City. It should be noted, however, that the Guayas estimate was derived from excess deaths, whereas those in Fig 3 were derived from COVID-19 deaths only—a difference discussed in the next section.

Discussion

The MUL is proposed here as an alternative to induced changes in PLEB to assess the impact of a cause of death on the individual lifespan for situations where the assumptions underlying life table construction are implausible, invalidating the usual interpretation of the PLEB. Complementing existing measures based on YLL, MUL is similarly based on estimating the number of potential years of life lost corresponding to deaths from a specific cause or excess deaths from a specific event in a given period. As directly comparing Eqs (1) and (4) shows, by averaging estimated potential years of life lost over the total number of deaths in the period, MUL is structured like a difference in PLEB. The MUL retains the intuitive interpretation of a difference in PLEB as a change in average length of life, but for an actual cohort of individuals (those dying in the period) subjected to prevailing mortality conditions rather than for a synthetic cohort subjected to indefinitely constant conditions.

To illustrate the derivation and interpretation of the MUL in the context of COVID-19 mortality, quarterly and seven-day MUL values were derived for different populations. As argued above, the MUL is best calculated from estimates of excess deaths by age and sex derived from period data on all-cause mortality by age and sex. In the case of COVID-19, a number of countries with good vital statistics were affected early on and considerable effort went into producing excess mortality estimates for these countries in a remarkably short time [35]. In the majority of the affected countries, however, the absence of reliable civil registration statistics precludes the indirect estimation of excess mortality—a limitation that can be expected to be relatively typical on other instances of mortality shocks. Moreover, even in countries with good vital statistics, data might not be available at the sub-national levels. To illustrate MUL derivation with these data limitations, quarterly MUL values were calculated instead from quarterly numbers of total (all-age) COVID-19 deaths in the population. This involved four assumptions: (1) COVID-19 deaths are properly accounted for in each population (unbiased “total” estimate), (2) all populations share an age-and-sex COVID-19 mortality “pattern” (i.e., the same ratio of a given age-and-sex-specific death rate to the all-age, both-sex death rate), (3) death rates from other causes are unchanged (the number of deaths from other causes is only reduced to the extent that COVID-19 deaths reduce exposure to other causes of deaths), and (4) individuals who died from COVID-19 would have faced the same risk of death from other causes as any individual of the same age and sex.

As discussed above, the last one is a standard assumption of YLL-based measures, but nonetheless problematic in the case of COVID-19 due to the higher proportion of several underlying long-term conditions (e.g., obesity) observed among COVID-19 victims. Adjusting for differences in long-term conditions prevalence is very data demanding, however, and the impact might not be as large as expected. A study performing this adjustment found that it reduced the AYLL from COVID-19 in the United Kingdom from 13 to 12 years (average for both sex) [36]. An alternative strategy was proposed here that underestimates the value of potential years of life lost over an age interval by estimating its value at the beginning of the age interval. As shown in the supplementary files, this yields quarterly PAYLL values for the United Kingdom that vary between 11.9 and 12.0 years (S1 Table), values thus quite close to what the adjustment for underlying long-term conditions might have provided. While there is of course no guarantee that this strategy would apply equally well to causes of death other than COVID-19, ignoring comorbidities will likely lead to some overestimation of AYLL for most causes of death, and purposely underestimating the number of potential years of life lost will likely be preferable in other situations as well.

With respect to the second assumption, age patterns of COVID-19 death rates are becoming available for an increasing number of nations [37], and do appear to share exhibit strong regularities with only modest variation in their slope except at the oldest ages [38]. The latter seems to reflect higher infection rates in nursing homes in some European countries and the USA [39]. There is also evidence of limited shifts in the age and sex patterns over time that might be related to policies implemented to mitigate fatality rates among the most vulnerable [40]. As shown in Fig 1 comparing the distribution of provisional COVID-19 death counts in the USA at four points in 2020 (May 13, one of the earliest dates for which this distribution is available, July 1st, September 30th and December 30th), death rates in the oldest age groups might have declined relative to the death rates at other ages, but the changes were quite modest.

Two sensitivity analyses were conducted to assess the effects of potential deviations from the second assumption (see Supplementary Files). The first one substituted the actual sex and age pattern in Brazil, the country with the second largest number of COVID-19 deaths in 2020, to the one derived by assuming the same COVID-19 mortality pattern as in the USA. As the slope of the Brazilian age pattern is a little less steep its US counterpart, the substitution makes the distribution of the COVID-19 deaths younger, increasing quarterly MUL estimates by about 8 to 9% (e.g., from 2.75 to 2.92 years at its peak, which in Brazil is reached in the third quarter of 2020, as shown in Fig 2 for Peru). This suggests that using population-specific data on COVID-19 mortality by age and sex might would improve MUL estimates, but not drastically so.

The second sensitivity analyses focused on the limitation of having data categorized as by the CDC, in 10-year closed age groups and for an oldest age group of 85 years and over. This open age-group may include a substantial share of COVID-19 victims (see Fig 1 for the USA), with substantial differences in YLL within this group. This was investigated with data for the Netherlands, as the country provides data for 5-year closed age groups and the open age group 95 years and over, estimating quarterly MUL with this age breakdown and after regrouping deaths as categorized by CDC. MUL values estimated with the original breakdown were about 8% smaller than with CDC age intervals, with the open-ended interval accounting for a little less than half of the difference. As shown for Lombardy in Fig 2, quarterly MUL in the Netherlands were larger in the second and fourth quarter, reaching .95-.96 years. With the open age interval starting at 85 years, the quarterly estimates increase to .98 years, and additionally, with 10-year closed age intervals, to 1.04 years. The overestimation induced by coarse age grouping is consistent with the fact that the age-pattern of COVID-19 mortality is a little steeper than the age-pattern of overall mortality [41] but again the overestimation is relatively modest.

In the case of COVID-19, the main concerns with respect to MUL estimation relates to the first assumption, namely, the proper reporting of COVID-19 deaths (first assumption). The potential biases discussed above with respect to the second and fourth assumption amounted to less than 10% changes in one direction or the other, but the ratios of excess deaths to reported COVID-19 deaths estimated for some countries (e.g., 2.2 in Mexico or 2.7 in Peru) [42] indicate that less than half of their COVID-19 deaths might have been accounted. If the discrepancy between excess mortality estimates and reported COVID-19 mortality correspond to under-reported COVID-19 deaths, Eq (6) can be used with an adjusted ratio DC/D. (If k is the ratio DC/D derived from reported COVID-19 deaths and α is the ratio of excess to reported COVID-19 deaths, the initial value of k should be multiplied by α.k/(1+(k.(α -1)) to obtain the ratio of excess to total deaths and, based on Eq (6), so should the initial MUL value). With ratios of 2.2 in Mexico and 2.7 in Peru for instance, the peak 7-day MUL values would increase from 6.24 to 8.96 years for Mexico City and from 2.67 to 5.49 years for Lima.

Adjusting MUL values in this manner should perform well when excess deaths do not also include excess deaths from other causes. Data from countries with good vital statistics, however, provides evidence against the assumption that death rates from other causes did not change (third assumption). In a number of high-income nations, declines in death rates from other causes are suggested by fewer excess deaths than reported COVID-19 deaths alone [43], whereas US death rates from heart disease and unintentional injuries have increased markedly during the pandemic [44]. In situations where a substantial portion of the discrepancy between estimates of excess deaths and official numbers of COVID-19 deaths originates in changes in other causes of deaths, the above adjustment of the MUL value through Eq (6) will not perform as well. In the case of other death rates that increased during the COVID-19 pandemic, such as unintentional injuries, because they tend to be at younger ages than COVID-19 deaths, equating excess deaths to unreported COVID-19 would lead to some underestimation of years of lost life and, as a result, MUL. A similar gap can be observed considering estimates of changes in PLEB that are now available in a number of nations [45] and that differ more from initial estimates based on reported COVID-19 deaths only [46] than excess to COVID-19 death ratio would have suggested.

Overall, MUL is not only structurally similar to a difference in PLEB, but its computation is also similar to that of a change in PLEB induced by incorporating additional deaths in a multiple-decrement life table framework. Similar assumptions are required, and both estimates are likely sensitive to a similar degree to the data quality issues discussed above, from the total number of additional deaths to their age distribution. The main difference between the two indicators is that, like YLL-based measures, MUL is not sex- or age-standardized and MUL comparisons across populations that differ markedly in age composition will be biased. On the one hand, all else equal, a younger population composition yields a younger distribution of deaths and a higher PAYLL value. On the other hand, when the cause of interest is one that affects older individuals more than all-cause mortality, as is the case for COVID-19, an older population distribution contributes to a higher proportion of excess deaths relative to all deaths. The two, opposite age-composition effects may partially off-set each other, but unlike differences in PLEB, MUL remains dependent on population distribution. This advantage of differences in PLEB over MUL comes at a substantial cost, however, since the internal derivation that rids differences in PLEB of the influence of population distribution assumes that period mortality conditions will become permanent. Almost by definition, this assumption is not tenable in the case of a mortality “shock.”

In such situations, MUL provides an unstandardized alternative to differences in PLEB, more readily interpretable as an average difference in length of lives lived per person. Related to other unstandardized measures such as the AYLL or YLL per capita, the MUL’s interpretation pertains to an actual death cohort, that is, population members who died during a certain period rather than to a synthetic cohort as represented in the life table. To reiterate, the MUL indicates the difference between their average age at death and their average expected age at death had a temporary mortality shock not occurred. This interpretation does not build on any assumption that these temporary conditions will either pass entirely or extend indefinitely into the future. Moreover, MUL remains interpretable regardless of its temporal and geographical scale, pertaining to deaths in a given population and period, and can serve as a short-term, micro-level indicator. As long as PAYLL can be assumed to be almost constant on a period, MUL values can easily be approximated as the product of the corresponding PAYLL and the ratio of excess to total deaths in the population during the period. In the specific case of COVID-19 mortality, quarterly values were found indeed to change little from one quarter to the next (S1 Table). This approximation can also be used for sub-area populations for which the necessary data are only provided of the whole-area population, as long as the age compositions of the sub- and whole-area populations can be held as relatively similar.

Supporting information

S1 Table. Full results.

MUL and related indicators for all national and first-level sub-national populations in Brazil, China, Italy, Mexico, Peru, Spain, and the United States of America.

(XLSX)

S1 File. Shortcuts.

Estimation of MUL values for sub-periods or sub-populations in Lombardy, New Jersey and Mexico City (Fig 3) and in Guayas, Ecuador.

(XLSX)

S2 File. Sensitivity Brazil.

Sensitivity analysis using actual age distribution for Brazil.

(XLSX)

S3 File. Sensitivity Netherlands.

Sensitivity analysis using actual age distribution for the Netherlands.

(XLSX)

Acknowledgments

The author thanks Hiram Beltrán-Sánchez for life tables for Mexican States, and Michel Guillot, Philippe Bocquier, Tim Riffe, Michel Garenne, Christophe Guilmoto and Sam Preston for comments on an earlier draft of this manuscript.

Data Availability

All raw data are from open online sources cited in the manuscript. Additional data files prepared from those have been placed in the GitHub repository (https://github.com/heuveline/ind-cov-mort/).

Funding Statement

The author received no specific funding for this work, but benefited from the research environment of the California Center for Population Research at UCLA (CCPR), which receives core support (P2C-HD041022) from the Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

References

  • 1.Beltrán-Sánchez H, Preston SH, Canudas-Romo V. An integrated approach to cause-of-death analysis: Cause-deleted life tables and decompositions of life expectancy. Demographic Research. 2008;19: 1323–1350. doi: 10.4054/DemRes.2008.19.35 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Ho J. The contribution of drug overdose to educational gradients in life expectancy in the United States, 1992–2011. Demography. 2017;54: 1175–1202. doi: 10.1007/s13524-017-0565-3 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Goldstein JR, Wachter KW. Relationships between period and cohort life expectancy: Gaps and lags. Population Studies. 2006; 60(3): 257–269. doi: 10.1080/00324720600895876 [DOI] [PubMed] [Google Scholar]
  • 4.Goldstein JR, Lee RD. Demographic perspectives on the mortality of COVID-19 and other epidemics. Proceedings of the National Academy of Sciences of the United States of America. 2020; 117(36): 22035–22041. doi: 10.1073/pnas.2006392117 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Ghislandi S, Muttarak R, Sauerberg M, Scotti B. 2020. News from the Front: Estimation of excess mortality and life expectancy in the major epicenters of the COVID-19 pandemic in Italy. MedRxiv [preprint]. 2020. doi: 10.1101/2020.04.29.20084335 [DOI] [Google Scholar]
  • 6.Trias-Llimos S, Riffe T, Bilal U. Monitoring life expectancy levels during the COVID-19 pandemic: Example of the unequal impact of the first wave in Spanish regions. PLOS One. 2020; 15(11): e0241952. doi: 10.1371/journal.pone.0241952 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Aburto JM, Kashyap R, Schöley J, Angus C, Ermisch J, Mills M, et al. 2020. Estimating the burden of COVID-19 on mortality, life expectancy and lifespan inequality in England and Wales: A population-level study. Journal of Epidemiology and Community Health. Published Online First: 19 January 2021. doi: 10.1136/jech-2020-215505 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.Ho T, Noymer A. Summertime, and the livin’ is easy: Winter and summer pseudoseasonal life expectancy in the United States. Demographic Research. 2017; 37(45): 1445–1476. doi: 10.4054/DemRes.2017.37.45 [DOI] [Google Scholar]
  • 9.Ramis H (director and writer), Rubin D (writer). Groundhog day. [Film] 1993. Washington, D.C., United States: National Film Registry.
  • 10.Keyfitz N. What difference would it make if cancer were eradicated? An examination of the Taeuber paradox. Demography. 1977; 14: 411–418. https://link.springer.com/content/pdf/10.2307/2060587.pdf [PubMed] [Google Scholar]
  • 11.Dempsey M. Decline in tuberculosis—The death rate fails to tell the entire story. The American Review of Tuberculosis. 1947; 56: 157–164. doi: 10.1164/art.1947.56.2.157 [DOI] [PubMed] [Google Scholar]
  • 12.OECD. Potential years of life lost (indicator). [Cited February 18, 2021]. doi: 10.1787/193a2829-en [DOI] [Google Scholar]
  • 13.Mitra AK, Payton M, Kabir N, Whitehead A, Ragland KN, Brown A. Potential years of life lost due to COVID-19 in the United States, Italy, and Germany: An old formula with newer Ideas. International Journal of Environmental Research and Public Health. 2020; 17: 4392. doi: 10.3390/ijerph17124392 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Mohanty SK, Dubey M, Mishra US, Sahoo U. Impact of COVID-19 attributable deaths on longevity, premature mortality and DALY: Estimates of USA, Italy, Sweden and Germany. MedRxiv [preprint] 2020. doi: 10.1101/2020.07.06.20147009 [DOI] [Google Scholar]
  • 15.Wetzler HP, Wetzler EA, Cobb HW. COVID-19: How many years of life lost? MedRxiv [preprint] 2020. doi: 10.1101/2020.06.08.20050559 [DOI] [Google Scholar]
  • 16.Pifarré i Arolas H, Acosta E, López Casasnovas G, Lo A, Nicodemo C, Riffe T et al. Global years of life lost to COVID-19. Scientific Reports. 2021; 11, 3504. doi: 10.1038/s41598-021-83040-3 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Modig K, Rau R, Ahlbom A. Life Expectancy: What Does it Measure? BMJ Open. 2020; 10. https://bmjopen.bmj.com/content/10/7/e035932 doi: 10.1136/bmjopen-2019-035932 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Marlow AK. Potential years of life lost: what is the denominator? Journal of Epidemiology & Community Health. 1995; 49: 320–322. doi: 10.1136/jech.49.3.320 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Aragon TJ, Lichtensztajn DY, Katcher BS, Reiter R, Katz MH. Calculating expected years of life lost for assessing local ethnic disparities in causes of premature death. BMC Public Health. 2020; 8: 116. doi: 10.1186/1471-2458-8-116 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Arias E, Xu JQ. United States Life Tables, 2018. National Vital Statistics Reports. 2020; 69(12). Hyattsville, MD: National Center for Health Statistics. [PubMed] [Google Scholar]
  • 21.United Nations, Department of Economic and Social Affairs, Population Division. World population prospects 2019, online edition. rev. [Cited June 28, 2021]. https://population.un.org/wpp/Download/Standard/CSV/.
  • 22.Istituto Nazionale di Statistica (Istat). Life tables. [Cited June 28, 2021]. http://dati.istat.it/Index.aspx?QueryId=19053&lang=en.
  • 23.Instituto Nacional de Estadística y Geografía (INEGI). Población. [Cited June 28, 2021]. https://en.www.inegi.org.mx/temas/estructura/default.html#Tabulados.
  • 24.Partida Bush VG, García Guerrero V. Proyecciones de la población de México y sus entidades federativas 2016–2050. Consejo Nacional de Población, Fondo de Población de Naciones Unidas, 2018. [Google Scholar]
  • 25.El Instituto Nacional de Estadastíca e Informática (INEI). Perú: Situación y perspectivas de la mortalidad por sexo y grupos de edad, national y por departamentos, 1990–2025. [Cited June 28, 2021]. http://proyectos.inei.gob.pe/web/biblioineipub/bancopub/Est/Lib0901/index.htm.
  • 26.United States Census Bureau. Explore census data. [Cited May 11, 2020]. https://data.census.gov.
  • 27.Centers for Disease Control and Prevention (CDC). CDC wonder. [Cited June 28, 2020]. https://wonder.cdc.gov/cmf-icd10.html.
  • 28.Preston SH, Heuveline P, Guillot M. Demography: Measuring and modeling population processes. Malden, MA: Blackwell; 2001. [Google Scholar]
  • 29.Guilmoto CZZ. COVID-19 death rates by age and sex and the resulting mortality vulnerability of countries and regions in the world. MedRxiv [preprint] 2020. doi: 10.1101/2020.05.17.20097410 [DOI] [Google Scholar]
  • 30.Centers for Disease Control and Prevention. Provisional COVID-19 death counts by sex, age and state. [Cited December 31, 2020]. https://data.cdc.gov/NCHS/Provisional-COVID-19-Death-Counts-by-Sex-Age-and-S/9bhg-hcku.
  • 31.Associação Nacional dos Registradores de Pessoas Naturais (ARPENBRESIL). Especial COVID-19. [Cited June 28, 2021]. https://transparencia.registrocivil.org.br/especial-covid.
  • 32.National Institute for Public Health and the Environment. Weekly coronavirus SARS-CoV-2 figures. [Cited June 28, 2021]. https://www.rivm.nl/coronavirus-covid-19
  • 33.Johns Hopkins University of Medicine, Coronavirus Resource Center. [Cited May 29, 2021]. https://coronavirus.jhu.edu/.
  • 34.Dirección General de Registro Civil, Identificación y Cedulación. Defunciones, enero-junio 2020. [Cited July 28, 2020]. https://www.registrocivil.gob.ec/cifras/
  • 35.Human Mortality Database. Short-term mortality fluctuations (STMF) data series. [Cited June 29, 2021] https://www.mortality.org/
  • 36.Hanlon P, Chadwick F, Shah A, Wood R, Minton J, McCartney G et al. COVID-19 –Exploring the implications of long-term condition type and extent of multimorbidity on years of life lost: A modelling study. Welcome Open Research. 2020; 5: 75. doi: 10.12688/wellcomeopenres.15849.3 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 37.Riffe T, Acosta E. COVerAGE-DB: A database of COVID-19 cases and deaths by age. [Cited December 28, 2020]. https://osf.io/mpwjq/. [Google Scholar]
  • 38.Ohnishi A, Namekawa Y, Fukui T. Universality in COVID-19 spread in view of the Gompertz function. Progress of Theoretical and Experimental Physics. 2020; 12: 123J01. doi: 10.1093/ptep/ptaa148 [DOI] [Google Scholar]
  • 39.O’Driscoll M, Ribeiro Dos Santos G, Wang L, Cummings DAT, Azman AS, Paireau J, et al. Age-specific mortality and immunity patterns of SARS-CoV-2. Nature. 2021; 590: 140–145. doi: 10.1038/s41586-020-2918-0 [DOI] [PubMed] [Google Scholar]
  • 40.Ioannidis JP, Axfors C, Contopoulos-Ioannidis DG. Second versus first wave of COVID-19 deaths: shifts in age distribution and in nursing home fatalities. Environmental Research. 2021; 195: 110856. doi: 10.1016/j.envres.2021.110856 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 41.Dowd JB, Andriano L, Brazel DM, Rotondi V, Block P, Ding X, et al. Demographic science aids in understanding the spread and fatality rates of COVID-19. Proceedings of the National Academy of Sciences of the United States of America. 2020; 117: 9696–9698. doi: 10.1073/pnas.2004911117 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 42.Karlinsky A, Kobak D. The World Mortality Dataset: Tracking excess mortality across countries during the COVID-19 pandemic. MedRxiv [preprint] 2021. doi: 10.1101/2021.01.27.21250604 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Kontis V, Bennett JE, Rashid T, Parks RM, Pearson-Stuttard J, Guillot M, et al. Magnitude, demographics and dynamics of the effect of the first wave of the COVID-19 pandemic on all-cause mortality in 21 industrialized countries,” Nature Medicine. 2020; 26: 1919–1928. doi: 10.1038/s41591-020-1112-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44.Ahmad FB, Anderson RN. The Leading Causes of Death in the US for 2020. Journal of the American Medical Association. 2021; 325(18): 1829–1830. doi: 10.1001/jama.2021.5469 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.Aburto JM, Schöley J, Kashnitsky I, Zhang L, Rahal C, Missov TI et al. Quantifying the impacts of COVID-19 pandemic through life expectancy losses: a population-level study of 29 countries. MedRxiv [preprint] 2020. doi: 10.1101/2021.03.02.21252772 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 46.Heuveline P, Tzen M. Beyond deaths per capita: Comparative CoViD-19 mortality indicators. BMJ Open. 2021; 11: e042934. doi: 10.1136/bmjopen-2020-042934 [DOI] [PMC free article] [PubMed] [Google Scholar]

Decision Letter 0

Bernardo Lanza Queiroz

26 Mar 2021

PONE-D-21-05770

The Mean Unfulfilled Lifespan (MUL): A new indicator of the impact of mortality shocks on the individual lifespan, with application to global 2020 quarterly mortality from COVID-19

PLOS ONE

Dear Dr. Heuveline,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

We, reviewers and myself, that the paper makes an extremely important contribution to the discussion. The main idea of the paper is very innovative. However, we believe the paper needs some adjustments before it can be published. In general, the paper could be better structured, figures should be revised for clarity, author could make replicable (I believe other will be interested in applying the method), and there are some issues in presenting the material that could be improved. For instance, I would like to see a better explanation of the calculations with more detailed discussion of examples.  The reviewers made very valuable and detailed comments. 

Some suggestions/comments

  1. selection of countries and examples. One suggestion is to focus on a series of countries with better data quality to be able to show in more detail calculations and discussion;

  2. this is related to the presentation of results and discussion. This section could be revised aiming for a more organized and structured presentation. I many parts the reader has some trouble following the main idea

  3. would it be possible to perform sensitive analysis?

  4. improve presentantion of results - there are many issues with the figures that were also reported by reviewers

  5. improve the discussion on the limitations of data

  6. please, see detail comments by both reviewers. 

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Reviewer #1: Yes

Reviewer #2: Partly

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Reviewer #1: Yes

Reviewer #2: I Don't Know

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Reviewer #1: No

Reviewer #2: No

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Reviewer #1: The author proposes a new indicator of average mortality to reflect life lost during the pandemic. I find the article well written and innovative. Below find my suggestions and questions that could be clarified aimed at improving the paper.

1)There are many data quality and reporting issues across different dimensions (age, sex, timely data, all cause vs COVID 10, etc) for many of the populations that the author analyses. In addition, the author mentions an analysis of 159 national populations and 122 sub-national populations, but the results fail to show most of these and instead only show results for few populations. In my view, the main contribution of the article is the new indicator and find the sparse results distractive. Why not focusing on a set of countries/population with high quality data at the granularity that is required to conduct the analysis and provide a more in-depth description of these results? The author relies on many estimates without showing any sensitivity of the estimates or validation of the choices (for example to disentangle by sex deaths), when at the moment there is reported information that could be used to estimate MUL, for example leveraging the STMF from Human Mortality Database for some countries and the COVerAGE database project (Riffe et al 2021).

2)The expression ‘The MUL also equals the product of (1) the proportion of deaths in the population during a reference period that are due to a specific cause or event and (2) the average reduction in length of life among individuals who died from that specific cause or due to that specific event in the population during the reference period. In the case of COVID-19’ is confusing to me because the term ^{−} () is not a reduction but a counterfactual value of life expectancy in the absence of C. For me the ‘average reduction’ would be ^{} - ^{−} or something similar. I noticed a couple of sentences with this issue, could the author either rephrase this or am I understanding it wrong?

3)Another counterfactual calculation of life expectancy in the absence of a cause of death that is worth mentioning is that described in Beltran-Sanchez et al (2008) in Demographic Research. Is the one used by the author in this article analogous to the one described in the cause-deleted section in his co-authored book Preston et al?

4)How is PAYLL calculated? It is mentioned that is a weighted average of counterfactual life expectancies that are estimated from prior conditions and do not change over time, but then in the methods section it says that they come from statistical offices, could you elaborate more on this?

5)A sensitivity analysis on how results differ from 5-year age groups and single year age groups would be useful. Similarly, some discussion on open age interval and how sensible results are to it would inform the reader about limitations.

6)Another approach to the interpolation would be to ungroup cause-specific deaths into single age groups, which would potentially ease the assumption made over n_a_x. This is what is done in the COVerAGE database project (Riffe et al 2021) using a penalize composite link model proposed by Rizzi et al and implemented in the ‘Ungroup’ package in R.

7)When calculating the lifetables representing actual mortality conditions (with COVID-19) in each quarter, how did you deal with the exposures? For yearly lifetables we tend to use the mid-year population but for quarterly life tables these should be adjusted.

8)The graphs could be improved by labelling correctly each element.

9)The lack of reproducibility has been noted as an issue in the social sciences. I encourage the author to share data and code, or at least code, used to make the calculations in an open repository. This would not only help in the reviewing process but also encourage readers to use the indicator proposed.

Reviewer #2: The paper aims to fill the gap between conclusions drawn from the imaginary period life table population and the vital counts happening in the real populations. It is a deep and thoughtful work that constitutes a valuable and perhaps even pathbreaking contribution to demographic literature. It is fascinating to see that the challenges of the mortality shock in the pandemic year became the catalyst that pushed demographic thinking closer to answering the burning questions. I’m strongly convinced that the paper should be published. Yet, in the current form the substantial idea does not seem to be comprehensively and conclusively supported by empirical examples. Below follow my comments and suggestions that can hopefully help the author improve this impressive paper.

The main challenge of the paper is the balance between the initial idea-driven sound methodological contribution and the timely and demanding context that the c19 pandemic pose. Honestly, I think the author did not succeed much in balancing the two would be focal topics of the paper. Upon a careful read, I’m convinced that the paper is primarily about the method and not the c19 mortality shock. If so, it would be nice to use some well documented mortality shock, for example the heat wave of 2003 in Europe, to illustrate the efficiency of the method on solid and conclusively recorded data. This would also allow to illustrate the magnitude of the main limitations and enrich the sketchily outlined discussion of the assumptions with careful sensitivity analysis. It would also allow to mimic the data challenges that arise from the coarseness of the provisional data on c19 deaths – 10y age groups and the open-ended age interval – and get some idea of how much they affect the estimates. If in contrast the author is convinced that the main focus of the paper would be to provide a comprehensive comparative framework for overviewing the impact of c19 pandemic on mortality across the world, the empirical evidence and the way the results are presented should be radically improved and systematized, and many more data biases and processing challenges should be addressed in much finer details. It seems to me that this paper naturally separates in two outlined parts, of which the first seems to be much more developed in the current manuscript.

Results section is very difficult to follow since there is no apparent structure in the way results are presented, and the mentioned in abstract “159 national populations and 122 sub-national populations” are not readily presented. It seems, the author needs to choose if the paper is primarily methodological or empirical that addresses the hot topic of 2020 mortality shock. If the latter, a much clearer way to deliver and represent comparable results for the said populations and sub-populations should be designed as dumping those in Table S1 is simple barely digestible for the readers.

Looking at Fig 3 and the empirical shortcut formula, it seems MUL is limited from the top by PAYLL in the population based on the counterfactual life table. With a sharp spike of deaths, as was seen in Madrid and New York, and the granular time scale, it seems the assumed relevance of the counterfactual life table may be compromised. For example the paper Pifarré i Arolas etal 2021 (#15 in the ref list) clearly shows that the naïve matching of c19 deaths with a reference life table results in a much larger than usual estimate of the average YLL per c19 death. Fig 1 does not provide a required confirmation that the reference life table may be applied here. First, the estimates shown in Fig 1 do not account for the pre-pandemic age distribution of deaths. Second, the example considers the US population, in which the unfolding of the pandemic, while varying largely across states, went pretty uniformly at the federal level of aggregation – so the comparison of the quarter estimates within the pandemic year does not provide the support for the appropriateness of using a 2018 life table as a reference.

The author argues several times that the shorthand estimation of MUL relies on the stability of PAYLL. If one takes this for granted, PAYLL can be disregarded, in which case the measure reduces to a p-score – % increase in all-cause mortality over the baseline, which is routinely reported for c19 deaths – via a straightforward logit transformation [p-score = exp(logit(Dc/D))]. So, basically under the assumptions of MUL, the paper suggest a translation of p-scores into a YLL measure. This may be more intuitive but inherits the population age structure driven limitations of p-scores.

Discussion (and also the Introduction) seem to accept the widespread misinterpretation of PLEB as an indicator that (under the hefty assumptions that are mostly omitted in popular interpretations) can inform on the mortality shock effects at the individual level. PLEB is not designed to do so. In a way stating the advantage of MUL (specifically designed to answer this question) against PLEB is not fair. The very first sentence of the Abstract (line 22) formulates this intuitive misinterpretation of PLEB forming the basis of the unfair comparison.

What seems a bit confusing in the results is that by MUL the author means only the calculation for one cause of death, namely c19. Since MUL is generic and applicable to any cause of death in any context it would be nice not to build an association between MUL and c19 necessarily.

Much more detailed discussion of c19 data limitations and biases is required. For example, on Line 271 ”but estimates of COVID-19 deaths are available” – under- and untimely reporting happens even in the more developed countries. Karlinsky & Kobak (https://doi.org/10.1101/2021.01.27.21250604) provide an overview of how largely c19 deaths are underreported compared with excess deaths. Similarly, there is no discussion of the limitations imposed by the use of WPP reference life tables that are based on 5x5 Lexis grid and extrapolations. How exactly were the reference life tables constructed? Were the average 2015–19 WPP life table assumed representing the 2020 counterfactual good enough? A full replication package documenting all the data processing and calculation steps would help a lot.

Technical comments

Numbering the equations would improve the readability, cross-referencing, and (in future) citation of the paper.

Figures can be improved a lot. Axis titles are missing. All figures will benefit from optimizing the size of the text element – currently too small. Figures 1 and (especially) 2 can benefit a lot from flipping the axes, which would allow to place text horizontally – comfortable for the reader. Figure 1 may be aligned in a population pyramid like fashion. X-axis of figure 3 may be optimized to show some key ticks/dates, e.g. months.

Some preprints in the references have already been published in peer-reviewed journals, e.g. #15 is now doi.org/ 10.1038/s41598-021-83040-3.

Minor comments

Line 138: “left” is a bit confusing word in thee context, since these are years lost

Line 227: “because COVID-19 victims are more likely to suffer from other long-term conditions” – a reference is needed, possibly (https://www.medrxiv.org/content/10.1101/2020.10.19.20214494v2)

Line 253: “appears preferable in this case” – reasoning needed

Line 359: “CoViD-19” – written differently

Line 366: “improve MUL estimates by a similarly modest order of magnitude” – I may be mistaken as a non-native English speaker, but I’m used to think that “order of magnitude” refers to a roughly x10 magnitude, which is out of place in the context of the phrase.

**********

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Reviewer #2: Yes: Ilya Kashnitsky

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PLoS One. 2021 Jul 27;16(7):e0254925. doi: 10.1371/journal.pone.0254925.r002

Author response to Decision Letter 0


1 Jul 2021

Editor

1. election of countries and examples. One suggestion is to focus on a series of countries with better data quality to be able to show in more detail calculations and discussion;

An illustration with good data quality (the Netherlands) from which the values can be computed directly has been added, but I believe it is also important not to shift the discussion too much towards these countries as mortality crises tend to occur in countries with data limitations (or to create situations such that good data collection has to be temporarily suspended).

2. this is related to the presentation of results and discussion. This section could be revised aiming for a more organized and structured presentation. I many parts the reader has some trouble following the main idea

Results and discussion sections have been thoroughly revised.

3. would it be possible to perform sensitive analysis?

Two types of sensitivity analyses have been added. The first one, using data from the Netherlands, analyzes the impact of age grouping (10-year v. 5-year closed intervals and 85 v. 95 as lower bound of open-ended age intervals). The second one, using data from Brazil, analyses the impact of deviation from a “standard” age distribution.

4. improve presentantion of results - there are many issues with the figures that were also reported by reviewers

Results section and figures have been revised.

5. improve the discussion on the limitations of data

The discussion has been added. As pointed out by the 2nd reviewer, however, the emphasis is on the presentation of a new measure. Covid data are used for illustration and the limitations of these data may be different from limitations in other contexts of mortality crisis.

6. please, see detail comments by both reviewers.

Reviewer #1:

1) Why not focusing on a set of countries/population with high quality data at the granularity that is required to conduct the analysis and provide a more in-depth description of these results?

See response to Editor’s point #1 above.

2) The expression […] is confusing to me […], could the author either rephrase this or am I understanding it wrong?

The description has been edited.

3) Is the [counterfactual calculation of life expectancy in the absence of a cause of death] used by the author in this article analogous to the one described in the cause-deleted section in his co-authored book Preston et al?

The approach is indeed similar, but in Beltran-Sanchez et al. as in textbook, data is on death from all causes from which a counterfactual life expectancy in the absence of a cause is derived; here data (extrapolated from past years) is on death in the absence of a cause to which death from specific cause are added, but underlying assumptions (competing causes of death) are the same in deletion and addition.

4) How is PAYLL calculated? […] in the methods section it says that they come from statistical offices, could you elaborate more on this?

Clarifications with respect to Reviewer 1’s comments #2 and #3 above should also clarify this. PAYLL is a weighted average of counterfactual life expectancies (see 2 above). These are derived from past trends in life expectancies prior to COVID-19 (see 3 above). The latter can be obtained from the UN (for national geographical units) or statistical offices (for sub-national geographical units).

5) A sensitivity analysis on how results differ from 5-year age groups and single year age groups would be useful. Similarly, some discussion on open age interval and how sensible results are to it would inform the reader about limitations

This sensitivity analysis has been added (illustration with data from the Netherlands for using 5-year age groups, and from the Netherlands and Brazil for using a different open age interval).

6) Another approach to the interpolation would be to ungroup cause-specific deaths into single age groups, which would potentially ease the assumption made over n_a_x. This is what is done in the COVerAGE database project (Riffe et al 2021) using a penalize composite link model proposed by Rizzi et al and implemented in the ‘Ungroup’ package in R.

Sensitivity analysis has been limited to the impact of lumping 5-year age groups together. The analysis suggesst the impact is limited. I did not see data that were initially tabulated in 1-year age group, only data that have been modelled in that way, and using those would replace one assumption (made over n_a_x) with another one (involved in modelling one-year age groups from data that may come from 5-year age group). It’s unclear that it would be preferable; its impact on the results would also be more opaque.

7) When calculating the lifetables representing actual mortality conditions (with COVID-19) in each quarter, how did you deal with the exposures? For yearly lifetables we tend to use the mid-year population but for quarterly life tables these should be adjusted.

Yes, these were adjusted by subtracting half of the additional deaths in the current quarter and all of the deaths in the previous quarters (see R script for details).

8) The graphs could be improved by labelling correctly each element

The graphs were edited, labels included.

9) The lack of reproducibility has been noted as an issue in the social sciences. I encourage the author to share data and code, or at least code, used to make the calculations in an open repository. This would not only help in the reviewing process but also encourage readers to use the indicator proposed.

Excel sheets illustrating the calculations and data analyses are added in the supplementary materials. R scripts and all necessary files (except raw files obtained from the UN) have been included in a Github repository.

Reviewer #2:

1) The main challenge of the paper is the balance between the initial idea-driven sound methodological contribution and the timely and demanding context that the c19 pandemic pose. Honestly, I think the author did not succeed much in balancing the two would be focal topics of the paper. Upon a careful read, I’m convinced that the paper is primarily about the method and not the c19 mortality shock.

The revised paper aims at a better balance, with the emphasis on the new indicator and its interpretation. While COVID-19 was the initial impetus for this, COVID-19 data are used only for illustration purposes.

2) If so, it would be nice to use some well documented mortality shock, for example the heat wave of 2003 in Europe, to illustrate the efficiency of the method on solid and conclusively recorded data. […] It would also allow to mimic the data challenges that arise from the coarseness of the provisional data on c19 deaths – 10y age groups and the open-ended age interval – and get some idea of how much they affect the estimates.

Sensitivity analyses have been added on the coarseness of the COVID-19 data (10-year age groups and open-ended age interval.

3) Results section is very difficult to follow since there is no apparent structure in the way results are presented, and the mentioned in abstract “159 national populations and 122 sub-national populations” are not readily presented.

In order to re-balance the paper toward the methods rather than the results, only four “typical” somewhat comparable populations are presented (Lombardy, New Jersey, Mexico City and Lima), and two more are introduced for the sensitivity analyses (Brazil and the Netherlands).

4) Looking at Fig 3 and the empirical shortcut formula, it seems MUL is limited from the top by PAYLL in the population based on the counterfactual life table. With a sharp spike of deaths, as was seen in Madrid and New York, and the granular time scale, it seems the assumed relevance of the counterfactual life table may be compromised. For example the paper Pifarré i Arolas etal 2021 (#15 in the ref list) clearly shows that the naïve matching of c19 deaths with a reference life table results in a much larger than usual estimate of the average YLL per c19 death.

Indeed, the empirical shortcut suggests that the MUL at most equals the PAYLL (the two being equal when all deaths in a given period are, for example, from COVID-19).

5) [In Figure 1,] the comparison of the quarter estimates within the pandemic year does not provide the support for the appropriateness of using a 2018 life table as a reference.

Figure 1 is not intended to address the appropriateness of using a 2018 life table as reference (in fact, extrapolated 2020 life tables are used as reference). The point of Figure 1 is to show the limited degree to which the distribution of deaths has changed over time in the US. Additional references that appeared since this article was first submitted have been added, as well as a sensitivity analysis on deviations from a “standard” age structure.

6) Under the assumptions of MUL, the paper suggest a translation of p-scores into a YLL measure. This may be more intuitive but inherits the population age structure driven limitations of p-scores.

The fact that the MUL is not an age-standardized measure is duly noted in the paper. What I describe in the “conceptual detour” section of the paper is that the calculation of a new value of life expectancy under mortality crisis conditions removes the effects of the population age structure by assuming stationary conditions. The assumption is not suited for mortality crisis conditions (rapid changes in mortality) and one of the main messages of the paper is that, in my view, for crisis mortality, the “cure” for age-structural dependency is worse than the “disease” so to speak.

7) Discussion (and also the Introduction) seem to accept the widespread misinterpretation of PLEB as an indicator that (under the hefty assumptions that are mostly omitted in popular interpretations) can inform on the mortality shock effects at the individual level. PLEB is not designed to do so. In a way stating the advantage of MUL (specifically designed to answer this question) against PLEB is not fair.

The introduction and discussion have been revised, hopefully to clarify that I do not accept the widespread misinterpretation of PLEB and that, indeed, MUL is an attempt to derive an indicator that can be interpreted the way most people interpret changes in PLEB. In particular, revised sections aim to clarify the distinction between what I see as (a) a correct use of differences in annual PLEB that stay clear of the above-mentioned widespread misinterpretation, and (b) an incorrect use of what Noymer and Ho have term “pseudo” life expectancies that refer to very short period of time. The advantage of MUL over PLEB for crisis mortality is also, I believe, that it is equally applicable to crises that develop over very What seems a bit confusing in the results is that by MUL the author means only the calculation for one cause of death, namely c19. Since MUL is generic and applicable to any cause of death in any context it would be nice not to build an association between MUL and c19 necessarily.

The revisions aim to emphasize the applicability of MUL to any type of mortality shocks, including those generating deaths from multiple causes (that could always be grouped in “excess” deaths), whereas the illustration is limited to COVID-19, which was also the initial impetus for this undertaking.

8) Much more detailed discussion of c19 data limitations and biases is required. For example, on Line 271 ”but estimates of COVID-19 deaths are available” – under- and untimely reporting happens even in the more developed countries. Karlinsky & Kobak (https://doi.org/10.1101/2021.01.27.21250604) provide an overview of how largely c19 deaths are underreported compared with excess deaths.

As the reviewer notes later, the emphasis of the paper should be, and is now, on the presentation and interpretation of MUL. Data issues that are specific to COVID-19 are duly noted, as this is the example chosen for illustrative purposes here, but should distract from the main aim of the paper.

9) Similarly, there is no discussion of the limitations imposed by the use of WPP reference life tables that are based on 5x5 Lexis grid and extrapolations.

Correct, this did not appear to be a major contribution to the sensitivity of the results.

10) How exactly were the reference life tables constructed? Were the average 2015–19 WPP life table assumed representing the 2020 counterfactual good enough? A full replication package documenting all the data processing and calculation steps would help a lot.

The 2020 counterfactual was interpolated from the 2015-20 and the 2020-25 WPP life tables. The R scripts have been included in the Github repository.

11) Numbering the equations would improve the readability, cross-referencing, and (in future) citation of the paper

Equations have been numbered.

12) Figures can be improved a lot. Axis titles are missing. All figures will benefit from optimizing the size of the text element – currently too small. Figures 1 and (especially) 2 can benefit a lot from flipping the axes, which would allow to place text horizontally – comfortable for the reader. Figure 1 may be aligned in a population pyramid like fashion. X-axis of figure 3 may be optimized to show some key ticks/dates, e.g. months

All figures have been updated and edited.

13) Some preprints in the references have already been published in peer-reviewed journals, e.g. #15 is now //doi.org/ 10.1038/s41598-021-83040-3.

References have been checked and edited.

14) Minor comments

Line 138: “left” is a bit confusing word in thee context, since these are years lost

Line 227: “because COVID-19 victims are more likely to suffer from other long-term conditions” – a reference is needed, possibly (https://www.medrxiv.org/content/10.1101/2020.10.19.20214494v2)

Line 253: “appears preferable in this case” – reasoning needed

Line 359: “CoViD-19” – written differently

Line 366: “improve MUL estimates by a similarly modest order of magnitude” – I may be mistaken as a non-native English speaker, but I’m used to think that “order of magnitude” refers to a roughly x10 magnitude, which is out of place in the context of the phrase.

Thank you for the reference and careful read. These have been corrected.

Decision Letter 1

Bernardo Lanza Queiroz

7 Jul 2021

The Mean Unfulfilled Lifespan (MUL): A new indicator of the impact of mortality shocks on the individual lifespan, with application to mortality reversals induced by COVID-19

PONE-D-21-05770R1

Dear Dr. Heuveline,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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Academic Editor

PLOS ONE

Additional Editor Comments (optional):

I really appreciated the careful revision of the paper. This is an extremely important contribution and making data and codes available will also be very important. 

Reviewers' comments:

Acceptance letter

Bernardo Lanza Queiroz

16 Jul 2021

PONE-D-21-05770R1

The Mean Unfulfilled Lifespan (MUL): A new indicator of the impact of mortality shocks on the individual lifespan, with application to mortality reversals induced by COVID-19

Dear Dr. Heuveline:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

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on behalf of

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Table. Full results.

    MUL and related indicators for all national and first-level sub-national populations in Brazil, China, Italy, Mexico, Peru, Spain, and the United States of America.

    (XLSX)

    S1 File. Shortcuts.

    Estimation of MUL values for sub-periods or sub-populations in Lombardy, New Jersey and Mexico City (Fig 3) and in Guayas, Ecuador.

    (XLSX)

    S2 File. Sensitivity Brazil.

    Sensitivity analysis using actual age distribution for Brazil.

    (XLSX)

    S3 File. Sensitivity Netherlands.

    Sensitivity analysis using actual age distribution for the Netherlands.

    (XLSX)

    Data Availability Statement

    All raw data are from open online sources cited in the manuscript. Additional data files prepared from those have been placed in the GitHub repository (https://github.com/heuveline/ind-cov-mort/).


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