REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Mouse anti-Actin (AC-40) | Sigma | Cat#A4700; RRID:AB_476730 |
Mouse anti-human Gelsolin AF488 (20) | Novus Biologicals/BioTechne | NBP1-05161AF488 |
Rat anti-mouse DNGR-1 (1F6) | The Francis Crick Institute | N/A |
Rat IgG2a mouse (R19-15) | BD Biosciences | Cat# 562028; RRID:AB_10895561 |
Mouse anti-mouse/rat XCR-1 BV421 (ZET) | Biolegend | Cat# 148216; RRID:AB_2565230) |
Mouse anti-mouse/rat XCR-1 BV785 (ZET) | Biolegend | Cat# 148225; RRID:AB_2783119 |
Rat anti-mouse CD45 V500 (30-F11) | BD Biosciences | Cat# 561487; RRID:AB_10697046 |
Mouse anti-mouse CD45.2 BV605 (104) | Biolegend | Cat# 109841; RRID:AB_2563485 |
Mouse anti-mouse CD45.2 BV711 (104) | Biolegend | Cat# 109847; RRID:AB_2616859 |
Mouse anti-mouse CD45.2 PerCP/Cy5.5 (104) | BD Biosciences | Cat# 109827; RRID:AB_893352 |
Rat anti-mouse Ly-6C BV605 (HK1.4) | Biolegend | Cat# 128036; RRID:AB_2562353 |
Rat anti-mouse Ly-6G FITC (1A8) | Biolegend | Cat# 127605; RRID:AB_1236488 |
Rat anti-mouse Ly-6G/Ly-6C (Gr-1) PerCP/Cy5.5 (RB6-8C5) | Biolegend | Cat# 108428; RRID:AB_893558 |
Rat anti-mouse CD8α BV605 (53-6.7) | Biolegend | Cat# 100744; RRID:AB_2562609 |
Rat anti-mouse CD8α BV421 (53-6.7) | Biolegend | Cat# 100753; RRID:AB_2562558 |
Rat anti-mouse CD8α APC (53-6.7) | BD Biosciences | Cat# 553035; RRID:AB_398527 |
Rat anti-mouse CD8α APC/Cy7 (53-6.7) | Biolegend | Cat# 100713; RRID:AB_312752 |
Rat anti-mouse CD8α FITC (53-6.7) | BD Biosciences | Cat# 553031; RRID:AB_394569 |
Rat anti-mouse CD45R/B220 BV650 (RA3-6B2) | Biolegend | Cat# 103241; RRID:AB_11204069 |
Rat anti-mouse CD45R/B220 PerCP/Cy5.5 (RA3-6B2) | Biolegend | Cat# 103236; RRID:AB_893354 |
Rat anti-mouse/human CD11b FITC (M1/70) | BD Biosciences | Cat# 553310; RRID:AB_394774 |
Rat anti-mouse CD11b BV650 (M1/70) | BD Biosciences | Cat# 563402; RRID:AB_2738184 |
Rat anti-mouse CD4 PerCP/Cy5.5 (RM4-5) | BD Biosciences | Cat# 553052; RRID:AB_394587 |
Rat anti-mouse CD4 PE (RM4-5) | BD Biosciences | Cat# 553049; RRID:AB_394585 |
Armenian hamster anti-mouse CD103 PerCP/Cy5.5 (2E7) | Biolegend | Cat# 121416; RRID:AB_2128621 |
Rat anti-mouse CD103 APC (M290) | BD Biosciences | Cat# 562772; RRID:AB_2737784) |
Mouse anti-mouse NK1.1 PE (PK136) | BD Biosciences | Cat# 553165; RRID:AB_394677 |
Mouse anti-mouse NK1.1 FITC (PK136) | Biolegend | Cat# 108706; RRID:AB_313393 |
Armenian hamster anti-mouse TCR γδ PE/Cy7 (GL3) | Biolegend | Cat# 118124; RRID:AB_11204423 |
Mouse anti-mouse CD64 PE/Cy7 (X54-5/7.1) | Biolegend | Cat# 139314; RRID:AB_2563904 |
Mouse anti-mouse CD64 BV421 (X54-5/7.1) | BD Biosciences | Cat# 740622; RRID:AB_2740319 |
Rat anti-mouse Sirpα (CD172α) AF647 (P84) | Biolegend | Cat# 144028; RRID:AB_27;1301 |
Rat anti-mouse Sirpα (CD172α) APC/Fire 750 (P84) | Biolegend | Cat# 144030; RRID:AB_2721317 |
Armenian hamster anti-mouse CD3e APC (145-2C11) | BD Biosciences | Cat# 553066; RRID:AB_398529 |
Armenian hamster anti-mouse CD3e APC-eFluor 780 (145-2C11) | E-Bioscience | Cat# 47-0031-82; RRID:AB_11149861 |
Rat anti-mouse MHC-II (I-A/I-E) AF700 (M5/114.15.2) | E-Bioscience | Cat# 56-5321-82; RRID:AB_494009 |
Rat anti-mouse MHC-II (I-A/I-E) FITC (M5/114.15.2) | E-Bioscience | Cat# 11-5321-85; RRID:AB_465233 |
Armenian hamster anti-mouse CD11c APCeFluor780 (N418) | E-Bioscience | Cat# 47-0114-82; RRID:AB_1548652 |
Armenian hamster anti-mouse CD11c BV421 (N418) | Biolegend | Cat# 117329; RRID:AB_10897814 |
Armenian hamster anti-mouse TCRβ APC/Cy7 (H57-597) | Biolegend | Cat# 109220; RRID:AB_893624 |
Rat anti-mouse F4/80 AF647 (BM8) | Thermo Fisher Scientific | Cat# MF48021; RRID:AB_10375289 |
Rat anti-mouse Siglec F PE (E50-2440) | BD Biosciences | Cat#55212; RRID:AB_394341 |
Rat anti-mouse CD62L FITC (MEL-14) | BD Biosciences | Cat# 553150; RRID:AB_394665 |
Rat anti-mouse CD44 APC-eFluor 780 (IM7) | E-Bioscience | Cat# 47-0441-82; RRID:AB_1272244 |
Rat anti-mouse CD44 APC (IM7) | BD Biosciences | Cat# 559250; RRID:AB_398661 |
Rat anti-mouse CD206 BV421 (C068C2) | Biolegend | Cat# 141717; RRID:AB_2562232 |
Rat anti-mouse CD86 BV711 (GL-1) | BD Biosciences | Cat# 740688; RRID:AB_2734766 |
Rat anti-mouse CD19 BV421 (6D5) | Biolegend | Cat# 115538; RRID:AB_11203527 |
Rat anti-mouse CD19 AF700 (6D5) | Biolegend | Cat# 115528; RRID:AB_49373 |
Mouse anti-mouse GATA-3 BV421 (16E10A23) | Biolegend | Cat# 653814; RRID:AB_2563221 |
Mouse anti-mouse RORγt BV650 (Q31-378) | BD Biosciences | Cat# 564722; RRID:AB_2738915 |
Rat anti-mouse FOXP3 PE (FJK-16 s) | E-Bioscience | Cat# 12-5773-82; RRID:AB_465936 |
Mouse anti-mouse T-bet APC (4B10) | BioLegend | Cat# 644814; RRID:AB_10901173 |
Rat anti-mouse CD16/CD32 (2.4G2) | BD Biosciences | Cat# 553141; RRID:AB_394656 |
InVivoMAb rat anti-mouse PD-1 (CD279) (RMP1-14) | Bio X Cell | Cat# BE0146; RRID:AB_10949053 |
InVivoMAb rat IgG2a isotype control (2A3) | Bio X Cell | Cat# BE0089; RRID:AB_1107769 |
InVivoPlus mouse anti-mouse CTLA-4 (CD152) (9D9) | Bio X Cell | Cat# BE0164; RRID:AB_10949609 |
InVivoMAb mouse IgG2b isotype control (MPC-11) | Bio X Cell | Cat# BE0086; RRID:AB_1107791 |
InVivoMAb rat anti-mouse CD8α (2.43) | Bio X Cell | Cat# BE0061; RRID:AB_1125541 |
InVivoMAb rat IgG2b isotype control | Bio X Cell | Cat# BE0090; RRID:AB_1107780 |
Mouse anti-mouse DNGR-1 (7H11) | The Francis Crick Institute | N/A |
Rat anti-mouse IFN-γ ELISA capture (R4-6A2) | BD Biosciences | Cat# 551216; RRID:AB_394094 |
Rat anti-mouse IFN-γ ELISA detection (XMG1.2) | BD Biosciences | Cat# 554410; RRID:AB_395374 |
Goat anti-mouse IgG Biotin ELISA detection | SouthernBiotech | Cat# 1030-08 RRID: AB_2794296 |
Mouse anti-FLAG-HRP (M2) | Sigma-Aldrich | Cat# A8592; RRID:AB_439702 |
Rabbit anti-mouse Gelsolin (D9W8Y) | Cell Signaling Technology | Cat# 12953; RRID:AB_2632961 |
Mouse anti-mouse β-Actin-HRP (AC-15) | Sigma-Aldrich | Cat# A3854; RRID:AB_262011 |
Rabbit anti-Ovalbumin (OVA; Egg-White) polyclonal | Sigma-Aldrich | ABS818 |
Goat anti-rabbit IgG(H+L), mouse/human-HRP polyclonal | SouthernBiotech | Cat# 4050-05; RRID:AB_2795955 |
Goat anti-mouse IgG (H+L)-HRP polyclonal | Thermo Fisher Scientific | Cat# G-21040; RRID:AB_2536527 |
Goat anti-mouse IgG (H+L) AF488 polyclonal | Thermo Fisher Scientific | Cat# A28175 RRID: AB_2536161 |
Bacterial and virus strains | ||
pMSCV-IRES-OVA-mCherry (retrovirus pseudotype) | This paper | N/A |
pMSCV-IRES-Life-Act-OVA-mCherry (retrovirus pseudotype) | This paper | N/A |
PLKO.1-puro-GsnshRNA (lentivirus) | This paper | N/A |
Influenza A virus (X31) | The Francis Crick Institute | N/A |
Chemicals, peptides, and recombinant proteins | ||
Collagenase IV | Worthington | LS004188 |
DNASE I | Roche | 11284932001 |
LIVE/DEAD Fixable Blue Dead Cell Stain Kit | Life Technologies | L34962 |
LIVE/DEAD® Fixable Aqua Dead Cell Stain Kit | Life Technologies | L34957 |
Fixation Medium A | Nordic MUbio | GAS-002A-1 |
CPRG Chlorophenol red-β-D-galactopyranoside | Roche | 10884308001 |
Poly(I:C) (HMW) VacciGrade | Invivogen | Vac-pic |
R-PE-conjugated H-2Kb /SIINFEKL pentamer | Proimmune | F093-2C-G |
R-PE-conjugated H-2Db/ASNENMETM Influenza A NP 366-374 Pentamer | Proimmune | F119-2A-G |
Albumin from chicken egg white (OVA) | Sigma | A5503 |
Albumin prepared from chicken eggs | Boes et al., 2003 | N/A |
OVA peptide (SIINFEKL) | The Francis Crick Institute | N/A |
ExtrAvidin-Alkaline Phosphatase | Sigma | E2636 |
SIGMAFAST p-nitrophenyl phosphatase tablets | Sigma | N2770-50SET |
Amersham Protran nitrocellulose blotting membrane | Cytiva | 10600001 |
Recombinant human plasma Gelsolin | Cytoskeleton Inc. | HPG6-A |
Recombinant human Cofilin 1 | Cytoskeleton Inc. | CF01-A |
Actin from skeletal muscle | Cytoskeleton Inc. | AKL99 |
Actin biotin-conjugated | Cytoskeleton Inc | AB07 |
Actin rhodamine-conjugated | Cytoskeleton Inc | AR05 |
Myosin II from rabbit skeletal muscle | Cytoskeleton Inc. | MY02 |
Actin Polymerization buffer (10x) | Cytoskeleton Inc | BSA02-001 |
Flag-tagged dimeric mDNGR-1 ECD | Ahrens et al., 2012 | N/A |
Critical commercial assays | ||
TissueLyser II | QIAGEN | https://www.qiagen.com/us/products/human-id-and-forensics/automation/tissuelyser-ii/ |
QiaShredder | QIAGEN | https://www.qiagen.com/gb/products/instruments-and-automation/accessories/qiashredder/#orderinginformation |
RNeasy Mini Kit | QIAGEN | https://www.qiagen.com/gb/products/discovery-and-translational-research/dna-rna-purification/rna-purification/total-rna/rneasy-mini-kit/#orderinginformation |
SuperScritpt II Reverse Transcriptase | Thermo Fisher Scientific | 18064022 |
PowerUp SYBR Green Master Mix | Thermo Fisher Scientific | A25741 |
Foxp3 / Transcription Factor Staining Buffer Set | E-Bioscience | 00-5523-00 |
EasySep Mouse Naive CD8+ T Cell Isolation Kit | STEMCELL Technologies | 19858 |
Cytometric bead array (CBA) | BD Biosciences | https://www.bdbiosciences.com/us/reagents/research/immunoassays/cytometric-bead-array/bd-cytometric-bead-array-cba-kits/c/745097 |
Deposited data | ||
Genotype-Tissue Expression (GTEx) | The Broad Institute | https://gtexportal.org |
The Cancer Genome Atlas (TCGA) | Firehose, The Broad Institute | https://gdac.broadinstitute.org/ |
REACTOME pathway database | (Jassal et al., 2020) | https://reactome.org |
Experimental models: cell lines | ||
bm1OVAMEF | C. Reis e Sousa (Sancho et al., 2009) | N/A |
BWZ | C. Reis e Sousa (Sancho et al., 2009) | N/A |
MutuDC1940 | (Fuertes Marraco et al., 2012) | N/A |
5555 BrafV600E | C. Reis e Sousa (Zelenay et al., 2015) | N/A |
MCA-205 | George Kassiotis | N/A |
EG-7 | The Francis Crick Institute | N/A |
B16F10 OVA-GFP | The Francis Crick Institute | N/A |
5555 BrafV600EGsn KD | This paper | N/A |
B16F10 LA-OVA-mCherry | This paper | N/A |
MCA-205 OVA-mCherry | This paper | N/A |
MCA-205 LA-OVA-mCherry | This paper | N/A |
MCA-205 LA-OVA-mCherry-cGSN | This paper | N/A |
MCA-205 LA-OVA-mCherry-sGSN | This paper | N/A |
Experimental models: organisms/strains | ||
C57BL/6J (WT) | The Francis Crick Institute | N/A |
sGsn−/− (C57BL/6-Gsnem2(sGsn)Crs) | This paper | N/A |
Clec9agfp/gfp (B6(Cg)-Clec9atm1.1Crs) | (Sancho et al., 2009) | N/A |
Clec9acre/cre (B6J.B6N(Cg)-Clec9atm2.1(icre)Crs) | (Schraml et al., 2013) | N/A |
sGsn−/−;Clec9agfp/gfp (C57BL/6-Gsnem2(sGsn)Crs; Clec9atm1.1Crs) | This paper | N/A |
sGsn−/−;Gc−/−(C57BL/6-Gsnem2(sGsn)Crs; Gctm1.1(KOMP)Vlcg) | This paper | N/A |
OT-I x Rag1−/−(B6.129-Tg(TcraTcrb)1100Mjb ; Rag1tm1Bal) | The Francis Crick Institute | N/A |
N. brasiliensis | Judy Allen | N/A |
Oligonucleotides | ||
Silencing-Mouse Gsn-shRNA-antisense: TTCAGACACGTGTACTTGAGC | Dharmacon Horizon Discovery | TRCN0000071930 |
Cloning-Primer cGsn/sGsn -Forward: CCCCAAGCTTGGCCTTCAGGCA GCCAGCTCAGC |
This paper | N/A |
Cloning Primer cGsn - Reverse: ACCC CAAGCTGGCCTCTGAGGCCATGG TGGTGGAGCACCCC |
This paper | N/A |
Cloning-Primer sGsn -Reverse: ACCC CAAGCTGGCCTCTGAGGCCA TGGCTCCGTACCGCTCTTC |
This paper | N/A |
Recombinant DNA | ||
pVSV-G | C.Reis e Sousa | N/A |
pHIV (gag-pol) | C.Reis e Sousa | N/A |
pSBbi-GFP-hygromycin resistant vector | Addgene | 605414 |
pCMV(CAT)T7-SB100 (SB100X transposase) | Addgene | 34879 |
Software and algorithms | ||
GraphPad Prism v7 | GraphPad | https://www.graphpad.com/scientific-software/prism/ |
FlowJo v10.7.1 | FlowJo | https://www.flowjo.com |
cBioportal | TCGA Pan-Cancer Atlas | https://www.cbioportal.org |
R: The Project for Statististical Computing | R project | N/A |