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. 2021 Jul 29;10:e70429. doi: 10.7554/eLife.70429

Table 2. Contribution of transcription factors P53, ATF4, and E2F to differentially expressed genes (DEGs) in CB002-analog #4 treated cells.

The total number of DEGs that overlapped with known genes of each transcription factor was calculated. This total is reflected in the ‘number of genes in DEG’ column. Using this number, we then calculated the ratio of DEGs divided by the total of genes in the transcription factor data set.

Transcription factor Number of genes in DEG Number in data set Ratio
P53 73+10+2+17=102 343 0.3
ATF4 127+10+19+2=158 559 0.28
E2F 17+2+19+210=248 1444 0.17