Abstract
Across eukaryotes, Rho GTPases such as Rac and Cdc42 play important roles in establishing cell polarity, which is a key feature of cell growth. In mammals and filamentous fungi, Rac targets large protein complexes containing NADPH oxidases (NOX) that produce reactive oxygen species (ROS). In comparison, Rho GTPases of unicellular eukaryotes were believed to signal cell polarity without ROS, and it was unclear whether Rho GTPases were required for ROS production in these organisms. We document here the first example of Rho GTPase–mediated post-transcriptional control of ROS in a unicellular microbe. Specifically, Cdc42 is required for ROS production by the NOX Fre8 of the opportunistic fungal pathogen Candida albicans. During morphogenesis to a hyphal form, a filamentous growth state, C. albicans FRE8 mRNA is induced, which leads to a burst in ROS. Fre8-ROS is also induced during morphogenesis when FRE8 is driven by an ectopic promoter; hence, Fre8 ROS production is in addition controlled at the post-transcriptional level. Using fluorescently tagged Fre8, we observe that the majority of the protein is associated with the vacuolar system. Interestingly, much of Fre8 in the vacuolar system appears inactive, and Fre8-induced ROS is only produced at sites near the hyphal tip, where Cdc42 is also localized during morphogenesis. We observe that Cdc42 is necessary to activate Fre8-mediated ROS production during morphogenesis. Cdc42 regulation of Fre8 occurs without the large NOX protein complexes typical of higher eukaryotes and therefore represents a novel form of ROS control by Rho GTPases.
Keywords: reactive oxygen species, yeast physiology, NADPH oxidase, fungi, morphogenesis
Abbreviations: CMAC, 7-amino-4-chloromethylcoumarin; FBS, fetal bovine serum; Fre8-dTom, Fre8 to dTomato; HBSS, Hanks buffered saline solution; H2O2, hydrogen peroxide; IMDM, Iscove's modified Dulbecco's medium; NBT, nitroblue tetrazolium; NOX, NADPH oxidase; ROS, reactive oxygen species; SOD, superoxide dismutase; YPD, yeast extract peptone dextrose
Reactive oxygen species (ROS) including superoxide anion radical and hydrogen peroxide (H2O2) have dual faces in biology. While ROS can cause severe oxidative damage to biomolecules, they can also be exploited as signaling molecules, particularly ROS originating from NADPH oxidase (NOX) enzymes (1, 2). In these large membrane proteins, electrons from NADPH pass through a flavin and heme to reduce molecular oxygen to superoxide. The superoxide is then converted to H2O2, either by spontaneous dismutation or by a superoxide dismutase (SOD) enzyme. The diffusible H2O2 then acts as a signaling molecule to elicit a wide array of downstream cellular events (1, 2, 3, 4).
Because of the potential toxicity of ROS, NOX enzymes are tightly regulated, and much of this regulation occurs at the post-translational level of enzyme activation. In plants, insects, and a subset of mammalian and higher fungi, NOX enzyme activation occurs through calcium fluxes and EF hands within domains of the NOX polypeptide (5). In mammals and higher fungi, activation can also occur through assembly of large NOX enzyme complexes with a Rho GTPase and multiple accessory proteins. The prototype is phagocytic NOX2 of the immune system that is activated by the Rac Rho GTPase. When stimulated, Rac activates NOX through physical interactions with a regulatory subunit p67. Once Rac engages p67, the complex activates electron flow through NOX from NADPH to oxygen. The NOX complex also includes an adaptor protein p22 and accessory components p47 and p40 (5, 6). In the fungal kingdom, Rac activation of NOX has been well studied in filamentous or multicellular fruiting body forming fungi. Analogous to mammals, Rac activates NOX through a regulator NoxR, equivalent to animal p67. Here, we shall refer to this essential regulator as NoxR/p67. Filamentous fungi also use NOX adaptors Bem (equivalent to animal p40 and/or p47) and NoxD (p22) (7, 8). ROS from Rac-activated fungal NOX is known to signal polarized cell growth across diverse classes of filamentous fungi (8, 9, 10, 11, 12, 13, 14).
In unicellular yeasts, polarized growth is also spatially and temporally regulated by Rho GTPases, and the best studied example is Cdc42 (15). This Rho GTPase is essential for bud formation for cell division in Saccharomyces cerevisiae (16) and in the opportunistic fungal pathogen Candida albicans (17). Cdc42 is in addition used for cell polarization during mating in S. cerevisiae (18), and Cdc42 is essential for hyphal morphogenesis of C. albicans (19, 20). C. albicans also expresses a Rac1 Rho GTPase that participates in a distinct cell polarization pathway associated with substrate invasion (21). As with metazoans, yeast Rho GTPases control cell polarity through numerous effector proteins and kinase signaling pathways (15, 16, 22). However, NOX is not a known effector of Rho GTPases in yeasts. There has been no documentation of NOX activation by Rho GTPases in any unicellular organism. Yeast genomes lack the NoxR/p67 regulator that is essential for Rac activation of NOX in higher fungi and mammals and are also missing the adaptor protein NoxD/p22. Until recently, yeasts were believed to lack NOX enzymes (8, 23, 24).
The first NOX identified for yeasts was S. cerevisiae Yno1 that acts in the endoplasmic reticulum for actin polymerization (25). In 2017, we identified a NOX known as Fre8 (or Cfl11) in C. albicans that functions during hyphal morphogenesis (26). C. albicans is polymorphic and can grow either as a yeast form, similar to S. cerevisiae, or as hyphal filaments that are important for host cell invasion (27). Fre8 specifically produces ROS in hyphal cells at the site of polarized growth. In laboratory cultures, Fre8 ROS is not essential for morphogenesis but contributes to sustaining late stage filamentation. In rodent models of infection, fre8 deletion mutants form attenuated biofilms on implanted devices and exhibit shortened hyphae in disseminated candidiasis (26). FRE8 is transcriptionally induced in hyphal cells coincident with the ROS burst of morphogenesis (26). To date, there have been no reports of post-transcriptional control of Fre8 ROS. There has also been no evidence for post-translational regulation of ROS by Fre8, particularly since C. albicans lacks the NOX regulatory subunits that are essential targets of Rho GTPases in higher organisms.
Here, we provide evidence for the first time that a NOX from a unicellular yeast is indeed controlled at the post-transcriptional level, and like higher eukaryotes, this regulation involves a Rho GTPase. In C. albicans, Cdc42 is required for the ROS burst of hyphal morphogenesis produced by Fre8 NOX. Surprisingly, this activation of NOX occurs in the absence of the NOX accessory factors used by higher fungi and animals. C. albicans Cdc42 control of Fre8-ROS may represent the most simple form of Rho GTPase control of ROS for polarized growth.
Results and discussion
Analysis of Fre8 localization
One method of post-transcriptional control of NOX in higher fungi involves protein localization. Specifically, in the filamentous fungi Neurospora crassa, most of NoxA is held in an inactive state in the vacuolar system, whereas only NoxA at the hyphal tip and plasma membrane is active for ROS production (7). To test whether the same may apply to C. albicans Fre8, we analyzed a fusion of Fre8 to dTomato (Fre8-dTom) for its enzymatic activity versus localization in cells undergoing hyphal morphogenesis.
Fre8-dependent ROS in hyphal cells can be readily monitored using luminol chemiluminescence (26). In the experiment mentioned in Figure 1, C. albicans was induced to form short hyphae or germ tubes by incubating for 1 h in Iscove's modified Dulbecco's medium (IMDM), a medium that promotes morphogenesis through high amino acids (26). Consistent with previous studies (26), fre8Δ/Δ cells show no hyphal defect under these laboratory conditions, and expression of Fre8-dTom also did not impact germ tube formation or hyphal length (Fig. 1, A and B). By luminol chemiluminescence, fre8Δ/Δ germ tubes show no ROS signal above background (Fig. 1C). Expression of Fre8-dTom in fre8Δ/Δ cells restored ROS production to near WT levels (Fig. 1, C and D). To examine localization of ROS production, we employed nitroblue tetrazolium (NBT) staining. The reduction of NBT by superoxide either inside or outside the cell produces blue formazan that can be visualized by light microscopy. With WT cells, many germ tubes show polarized NBT staining toward the hyphal tip, in contrast to the uniform light background staining of fre8Δ/Δ mutants (Fig. 2). Intensified NBT staining toward the hyphal tip was also seen in a number of cells expressing Fre8-dTom (Fig. 2), similar to vesicular NBT staining reported for filamentous fungal NOX at sites of polarized growth (13, 28). Thus, Fre8-dTom is active for ROS production, and the activity concentrates toward the hyphal tip.
Based on the pattern of NBT staining ((26) and Fig. 2), we predicted a Fre8-dTom localization at the hyphal tip. However, much of Fre8-dTom is in the main vacuole of the mother cell as defined by indentations with light microscopy, as well as in compartments within the germ tube, whether cells were induced for hyphal growth with IMDM (Fig. 3A) or serum (Fig. 3B). To further define Fre8-dTom localization, we employed the vacuolar dye 7-amino-4-chloromethylcoumarin (CMAC) (29), and Figure 3C shows that Fre8-dTOM colocalizes with CMAC. Compared with the vacuolar network localization of Fre8-dTOM, free dTom exhibits diffuse cytoplasmic staining excluded from the vacuole in both germ tubes and budding yeast-form cells (Fig. 3D).
Vacuolar localization was also recently reported for a Fre8-GFP fusion expressed ectopically under the ACT1 promoter (30). In Figure 3, Fre8-dTom is ectopically expressed under ENO1, and we therefore addressed whether the protein may be mislocalized because of overexpression. As seen in Figure 4A, cells expressing FRE8-GFP as a sole copy from the endogenous promoter at the FRE8 locus exhibit a similar distribution as cells expressing FRE8-dTom ectopically, following 90 min of serum induction. Fre8 was observed in the vacuole of the mother cell, as well as in the filament, in a compartment likely to be fragmented vacuoles. In this compartment, the concentration of Fre8 is increased compared with that of the mother cell vacuole (see line plot profiles, bottom panel; Fig. 4A). Furthermore, it is noteworthy that at earlier serum induction times, that is, 60 to 70 min, we also observed cells with additional fluorescence signal associated with the cortical apex (Fig. 4B). This low cortical signal was not seen when FRE8 was expressed from its endogenous promoter at later times, suggesting that a fraction of Fre8 may transiently associate with the plasma membrane. As this cortical signal was also not seen when FRE8 was expressed from the ENO1 promoter, transient induction and expression level may be critical.
Although Fre8 can be seen mainly throughout the vacuolar network (Figs. 3 and 4), Fre8-derived ROS is focused toward the hyphal apex (Fig. 2), and it is probable that much of the protein in the vacuolar network is inactive, similar to fungal NoxA of N. crassa (7). By fluorescence microscopy, we observed Fre8 in compartments close to the hyphal tip (Figs. 3 and 4), and it is likely that these are responsible for the ROS generated, as has been reported for vesicular NOX of certain filamentous fungi (13, 28). We originally predicted a plasma membrane localization for Fre8, since an extracellular SOD5 can react with superoxide derived from Fre8 (26), and it is indeed possible that a small fraction of Fre8 may transiently associate with the apical cortex (Fig. 4B). In any case, whether in apical compartments or cortex, only Fre8 in the hyphal apex would be active for ROS production, indicative of post-translational activation.
ROS production by ectopically expressed FRE8
FRE8 is well known to be regulated at the transcriptional level. FRE8 mRNA is of very low abundance in budding yeast-form cells but is strongly induced during hyphal morphogenesis (26, 31). We can temporally monitor this induction of FRE8 in real time using luminol chemiluminescence. In the experiment mentioned in Figure 5, yeast cells were induced to form germ tubes during the chemiluminescence assay by shifting the temperature to 37 oC and by including IMDM in the reaction mix. After 30 to 45 min, cells began to form visible germ tubes that progressively lengthen throughout the course of the reaction (Fig. 5A). In WT cells, FRE8 mRNA (Fig. 5B) and Fre8-dependent ROS (Fig. 5C) are induced concomitant with this morphogenesis.
We also examined the time course of ROS production when FRE8 is ectopically expressed from ENO1 using our Fre8-dTom fusion. Unlike WT cells that produce no ROS in yeast-form cells during the first 30 min, the yeast-form cells expressing Fre8-dTom from ENO1 emit ROS during this phase (Fig. 5C). This finding is consistent with our previous results showing Fre8-ROS production in yeast-form cells that ectopically express FRE8 (26). As cells transition to germ tubes, ENO1-driven FRE8 mRNA levels vary opposite to that observed with endogenous FRE8, with mRNA levels of FRE8-dTom dropping ≈10-fold (Fig. 5D). Surprisingly, ROS production from ENO1-driven Fre8-dTom did not follow this reduction in mRNA level, as a second wave of ROS production initiated at 60 min as morphogenesis proceeded (Fig. 5C). This post-transcriptional regulation of FRE8 is consistent with our studies of Fig. 2, Fig. 3, Fig. 4 indicating control of Fre8 activity at the post-translational or protein localization level.
Collectively, our studies indicate that Fre8 production of ROS proceeds by two steps during morphogenesis. First, FRE8 mRNA is induced 10- to 100-fold in cells induced to form hyphae as part of the transcriptional reprogramming for morphogenesis (26, 31). Second, independent of transcription, Fre8 is activated for ROS production (Fig. 5), specifically at the hyphal tip (Fig. 2), while much of Fre8 exists in the vacuolar network in an apparent inactive state (Figs. 3 and 4). Such spatial control of Fre8 activity is highly reminiscent of what has been reported for NOX of N. crassa and Aspergillus fumigatus. In these filamentous fungi, NOX is only active at the site of polarized growth when the enzyme engages the Rho GTPase RacA and NoxR/p67 regulator (7, 13). Mammalian NOX2 has also been reported to exist in an inactive holding state in lysosomes and becomes active when the enzyme contacts Rac and NoxR/p67 in the phagolysosome (32). Is C. albicans Fre8 likewise regulated by a Rho GTPase?
Rho GTPases and regulation of C. albicans Fre8-ROS
Although there is no NoxR/p67 in the genomes of yeasts, C. albicans does express a Rac1 Rho GTPase that is needed for invasion of solid substrates (21). We therefore tested the possible role of Rac1 in regulation of Fre8 ROS. C. albicans rac1Δ/Δ mutants are capable of forming germ tubes in liquid IMDM (Fig. 6A, top), consistent with other studies in liquid cultures (21). Using the luminol chemiluminescence assay, we observed no loss in Fre8 ROS in the rac1Δ/Δ mutant (Fig. 6A, bottom), and if anything, ROS was somewhat elevated in this mutant across numerous experimental trials (Fig. 6B). This increase in Fre8 ROS occurs independent of any changes in FRE8 mRNA levels (Fig. 6C).
Rac1 in C. albicans is activated by the guanine nucleotide exchange factor Dck1p (33), hence, we examined Fre8-ROS in the dck1Δ/Δ strain. As seen in Figure 6, D–F, similar results were obtained with dck1Δ/Δ mutants, where Fre8-ROS is somewhat elevated (Fig. 6, D and E), without changes in FRE8 mRNA levels (Fig. 6F). Therefore, unlike filamentous fungi and animals, C. albicans Fre8 is not dependent on Rac1 for activity and, if anything, may be negatively impacted by this Rho GTPase activity.
A second Rho GTPase in C. albicans is Cdc42, and we tested whether Fre8 ROS is regulated by this GTPase. C. albicans Cdc42 is essential for viability (17), and overexpression of a constitutively active Cdc42 allele is deleterious for growth (20); hence, we employed a Δcdc42/pMetCDC42 strain expressing MET3-repressible CDC42 that is viable in media lacking methionine (19, 34). In the experiment mentioned in Figure 7, cells were initially cultured in media lacking methionine, then CDC42 was repressed by adding methionine in the final 2 h of yeast-form growth and during the 1 h induction of germ tubes. These cells with repressed CDC42 produced short germ tubes (Fig. 7A), consistent with previous studies (19, 20, 34). In spite of this stunted morphogenesis, FRE8 mRNA was induced, and there was no significant difference in FRE8 expression in WT versus Δcdc42/pMetCDC42 cells (Fig. 7B). However, a dramatic impact on Fre8-ROS was observed, as ROS levels were reduced nearly 10-fold in Δcdc42/pMetCDC42 cells (Fig. 7, C and D). This loss in ROS is not because of the reduced hyphal length. As mentioned previously, Fre8 can produce ROS in the absence of hyphae, specifically in yeast-form cells ectopically expressing FRE8 ((26) and Fig. 5C). To examine the requirement for Cdc42 activity further, we tested the importance of Cdc24, the unique guanine nucleotide exchange factor for Cdc42 required for viability, using a similar MET3-repressible strain, Δcdc24/pMetCDC24 (19). As seen in Figure 8A, cells with repressed CDC24 also have short germ tubes consistent with previous findings (19, 34). As with Cdc42 (Fig. 7, B–D), repression of CDC24 expression resulted in a reduction of Fre8-ROS (Fig. 8, C and D) without significant changes in FRE8 mRNA (Fig. 8B).
C. albicans Cdc42 activity is negatively regulated by the GTPase-activating proteins Rga2 and Bem3 (35, 36). A double rga2 bem3 null strain is viable (35, 36), and there was no obvious impact on germ tube formation in IMDM (Fig. 9A, top). We observed that Fre8-ROS was reproducibly increased in the rga2 bem3Δ/Δ strain (Fig. 9A, bottom, and B), without significant changes in FRE8 mRNA (Fig. 9C), consistent with these GTPase-activating proteins negatively regulating Cdc42.
Together, the findings of Fig. 7, Fig. 8, Fig. 9 support the notion that Cdc42 positively regulates Fre8-ROS. The effect of Cdc42 occurs in the absence of changes in FRE8 mRNA, and the converse is true: there are no statistically significant changes in CDC42 and CDC24 mRNA as a function of FRE8 expression (Fig. 8, E and F). In contrast to the positive effects of Cdc42, C. albicans Rac1 appears to downregulate Fre8-ROS (Figs. 6 and 7). This pattern of antagonistic functioning of two Rho GTPases in NOX ROS formation has previously been observed with both filamentous fungi (12) and mammals (37), although Rac activates and Cdc42 negatively regulates NOX ROS in these higher organisms (12, 37). The mechanism has been ascribed to Cdc42 competing with Rac for productive binding to NOX or to the NoxR/p67 regulator (12, 37). Interestingly, previous studies in C. albicans indicated that Rac1 may interfere with Cdc42 promotion of hyphal growth by titrating out an effector molecule (21). Fre8 may be one such effector of Cdc42 subject to Rac1 interference.
Possible mechanisms for Cdc42 regulation of Fre8
How might Cdc42 positively regulate Fre8 activity? Mutants of cdc42 show no loss in FRE8 mRNA levels (Fig. 7B), and by examination of Fre8-dTom, the NOX is present in cdc42 mutants and localizes in the vacuolar network (Fig. 10, A and B). In C. albicans, active Cdc42 localizes exclusively at the hyphal tip during morphogenesis (38, 39), the same site as Fre8 ROS production. Therefore, Fre8 may be activated upon engaging Cdc42 or a Cdc42 effector molecule specifically at the hyphal tip. Such spatial control of NOX by Rho GTPases is characteristic of higher fungi and mammals: the bulk of NOX in these higher organisms is inactive in the vacuolar/lysosomal system and is only activated at locations where NOX contacts Rac or the NoxR/p67 regulator (7, 32).
In filamentous fungi and mammals, NoxR/p67 is central to NOX activation by Rac (6). As mentioned previously, yeast genomes lack NoxR/p67; however, they do express Bem1 that, in filamentous fungi, facilitates tethering of NoxR/p67 to membranes (8). In C. albicans, Bem1 is not critical for morphogenesis (19), and we observed that Bem1 is also not required for Fre8 activity during morphogenesis, as repressing BEM1 expression by ≈100-fold failed to inhibit ROS production (Fig. 10, C and D).
Collectively, our studies demonstrate that in C. albicans, the Rho GTPase Cdc42 controls Fre8 ROS at the post-transcriptional level in the absence of NoxR/p67 and other accessory proteins used in Rac activation of NOX in higher fungi and mammals. The lack of a NoxR/p67 requirement may explain why C. albicans can use Cdc42 as opposed to Rac in the control Fre8 NOX. In higher fungi and mammals, Rac interactions with NoxR/p67 require Rac residues A27 and G30 that are absent in Cdc42 (6, 12, 37, 40, 41, 42). The only other known case of Rho GTPase control of NOX without NoxR/p67 occurs with plant NOX, and there, Rac regulation involves EF hands in the NOX polypeptide (43, 44). Fre8 contains no EF hands, so a distinct mechanism must be involved. As one possibility, C. albicans Cdc42 may directly activate Fre8 through physical interactions with the NOX. If so, this would represent a unique mechanism for Rho GTPase regulation of ROS, as C. albicans is missing the NoxR/p67 required for Rac activation of NOX in filamentous fungi and animals. Rac in these higher organisms physically interacts with NoxR/p67 (6, 8). The Bokoch group reports that Rac can also bind mammalian NOX2 (37, 40, 45), although this is somewhat controversial (6). In plants, Rac1 physically interacts with the EF hand containing region of plant NOX (43, 44), but since there are no EF-hand motifs in C. albicans Fre8, as well as no NoxR/p67 regulator, any direct interactions between Cdc42 and Fre8 would be unlike that of higher organisms. In addition, such physical interactions would represent a small pool of Fre8, as only a low level of Fre8 associates transiently with the apical cortex where active Cdc42 resides (Fig. 4). As an alternative possibility, Cdc42 may not directly interact with Fre8 but rather work through as-of-yet unknown regulators of Fre8 ROS, analogous to NoxR/p67. The effects of Cdc42 on Fre8 activity may also be indirect via a Cdc42 effector. There are numerous downstream targets of Cdc42 that are required for filamentation, including p21 and MAP kinases, formins, and others (22), and Fre8 NOX may fall under control of one of these effectors. Since Cdc42 control of Fre8 NOX is clearly post-transcriptional, the mechanism involving such effectors would be distinct from the recently reported transcriptional control of S. cerevsiae Yno1 NOX by MAP kinase pathways (46).
Conclusion
Cdc42 has long been known to drive morphogenesis in C. albicans, and until now, the assumption has been that this control of polarized growth occurs without the ROS burst characteristic of multicellular eukaryotes. Our studies challenge this dogma and demonstrate that Rho GTPase–controlled polarized growth in unicellular yeasts can also involve post-transcriptional activation of NOX enzymes. To date, there have been two mechanisms ascribed for Rho GTPase control of NOX ROS. The first involves the large multisubunit NOX complex including the essential NoxR/p67 regulator that is the direct target of the Rho GTPase. The second involves Rho GTPase interaction with EF hands on NOX. Since Fre8 lacks EF hands, and since the essential regulatory subunits are missing in yeast genomes, Cdc42 control of Fre8 ROS must require a third distinct mechanism. This first report of a distinct alternative for Rho GTPase control of ROS is not likely unique to C. albicans. Other unicellular and pathogenic fungi have multiple FRE8-like genes (47) and may similarly use ROS for signaling polarized growth. Our studies will pave the way to more globally examine how unicellular fungi use ROS for growth and pathogenesis.
Experimental procedures
Yeast strains and growth conditions
The C. albicans mutant strains used in this study were derived from the clinical isolate SC5314 or from BWP17 (ura3::imm434/ura3::imm434 iro1/iro1::imm434 his1::hisG/his1::hisG arg4/arg4) or SN250 (his1Δ/his1Δ, leu2Δ::Candida dubliniensis HIS1/leu2Δ::Candida maltosa LEU2, arg4Δ/arg4Δ, URA3/ura3Δ::imm434, IRO1/iro1Δ::imm434). The fre8Δ/Δ strain CA-JG211 was constructed as described from SC5314 (26). The Δcdc42/pMetCDC42 (PY47), Δcdc24/pMetCDC24 (PY101), and Δbem1/pMetBEM1 (PY63) strains were generated from BWP17 as published (19, 34), as was the rac1Δ/Δ (PY189) strain (21). The rga2Δ/bem3Δ 615 strain derived from BWP17 (36) was a gift from Alexandra Brand and Peter Sudbery. The SN250:dck1Δ/Δ strain was obtained through the Fungal Genetics Stock Center.
Strains expressing Fre8-dTomato were created using a plasmid containing the coding sequence of FRE8 fused at the C terminus to dTomato, constructed from the pENO1-dTom-NATr vector (Addgene plasmid no. 52208; (48)) and kindly provided by Dr Julie Gleason. The plasmid was linearized within ENO1 at Not1 and used to transform the fre8Δ/Δ null strain CA-JG211, BWP17, and the Δcdc42/pMetCDC42 strain PY47. To express isolated dTomato, SC5314 was transformed in a similar manner with the backbone vector pENO1-dTom-NATr (Addgene plasmid no. 52208; (48)).
A strain expressing FRE8-GFP as a sole copy at its endogenous locus (PY6053) was constructed by sequential transformations, using primers CaFre8S1-AFP and CaFre8S2 (Table S1) initially with the pFA-GFPgamma-HIS1 plasmid (49) and the CaBWP17 strain (50) (PY4860) to generate PY5590 and subsequently with the pFA-GFPgamma-ARG4 plasmid (49) and PY5590 to generate PY6053. Correct integrants were verified by PCR for the presence of the FRE8-GFP fusion and the absence of endogenous FRE8, using in particular primer pairs CaFRE8p2076 and GFPm106 and CaFRE8p2076 and CaFRE8m2376, respectively (Table S1).
All strains were maintained at 30 °C in a yeast extract, peptone-based medium (yeast extract peptone dextrose [YPD]) with 2% (w/v) glucose. Studies involving morphogenesis utilized yeast-form cells obtained from log phase cultures, that is, culture absorbance of 1.0 to 2.0 at 600 nm. Typically, the yeast-form cells were obtained from YPD that in the case of BWP17 was supplemented with 80 mg/l uridine. In experiments involving methionine-repressible expression of CDC42, CDC24, and BEM1, yeast-form cells were obtained by growth in a synthetic complete medium containing 0.67% yeast nitrogen base and 2% glucose but lacking cysteine and methionine.
To induce morphogenesis, yeast-form cells were inoculated at an absorbance of 0.2 at 600 nm in either IMDM (Gibco; 21056023), in YPD + 10% fetal bovine serum (FBS; heat inactivated; Corning/Cellgro), or in the reaction mixture for luminol chemiluminescence (described later) containing 25% IMDM. With IMDM and serum induction, cells were first starved in water at 30 °C for 30 min prior to hyphal induction, and in all cases, morphogenesis proceeded for 37 °C at 1 h or for indicated time points. In experiments involving methionine-repressible expression of CDC42, CDC24, and BEM1, 2.5 mM of methionine was added in the final 2 h of yeast-form growth and during hyphal morphogenesis. In Figure 4, filamentous growth induction was carried out as described previously with 50% serum (21).
Biochemical assays, microscopy, and statistical analysis
For luminol chemiluminescence analysis, cells were induced to form germ tubes for 1 h in IMDM as described previously, and 50 μl of this culture was added directly to a 96-well plate containing 150 μl of Hanks buffered saline solution (HBSS) with a final concentration of 0.15 mM luminol (Cayman Chemical Company) and 2.67 units per milliliter of horseradish peroxidase. In studies where yeast-form cells were added to the luminol reaction, 0.01 to 0.02 units of cells at an absorbance at 600 nm were added to the reaction mix containing 25% IMDM and 75% HBSS. The samples were analyzed for luminol chemiluminescence at 37 °C using a Biotek Synergy HT plate reader (Biotek) as previously described (26). To calculate total luminescence over a 90-min time interval, the area under the curve was calculated using GraphPad Prism 8 software (GraphPad) with background luminescence subtracted.
For quantitative RT-PCR analysis, germ tube cells were prepared in 20 ml IMDM as described previously. In experiments where yeast-form cells were induced to form hyphae during the course of the luminol assay, a 25-ml reaction containing 25% IMDM and 75% HBSS was used, and cells were harvested at designated time points. Pelleted fungal cells were washed twice with diethylpyrocarbonate-treated water, and RNA was prepared by the hot acid phenol method (51). Complementary DNA was prepared using the Maxima H Minus First Strand cDNA Synthesis Kit or the RevertAid cDNA Synthesis Kit (Thermo Fisher Scientific). Quantitative RT-PCR was completed using the Powerup SYBR Green Master mix (Thermo Fisher Scientific). Values were normalized to TUB2 using the ΔCT method, where CT is the threshold cycle. Amplicons of ∼200 bp were obtained using the designated primers for FRE8, TUB2, BEM1, CDC42, and CDC24 (Table S1).
NBT staining was carried out with germ tubes formed for 45 min in a 10-ml culture of FBS containing YPD. Cells were harvested, washed once in HBSS, and resuspended in 1 ml of a solution containing 0.05% NBT (w/v) in 25% IMDM and 75% HBSS. Cells were incubated at 37 oC for 30 min at 220 rpm in the dark. Samples were harvested, washed once in HBSS and once in 70% ethanol, and resuspended in 200 ml 50% glycerol/HBSS prior to light microscopy at 100× magnification on a Zeiss Axio ImagerA2 microscope (Zeiss).
In studies of morphogenesis, dark field microscopy of live C. albicans cells was carried out using a Nikon Infinity 1 microscope at 40× magnification. Measurements of germ tube length were obtained using ImageJ at a ratio of 1.5 μm per 10 pixels. For fluorescence microscopy of Fre8-dTom of dTom-expressing cells, germ tubes were prepared as described previously from IMDM or in FBS. In cases where vacuoles were stained with CMAC (29), 5 μM CMAC (Thermo Fisher Cell Tracker Blue) in dimethyl sulfoxide was added from a 10 mM stock to cultures in the final 30 min of hyphal formation; 2.0 units at an absorbance of 600 nm were harvested and resuspended in 1 ml of sterile water; 10 μl of this cell suspension was mixed with 10 μl of fluoromount-G mounting medium and added to a microscope slide (Fisherbrand Superfrost Plus). No. 1 coverslips were added and sealed using nail polish. Fluorescence was imaged using the Zeiss Observer Z1 fluorescence microscope at 100× using either the DsRED channel for dTomato, the 4′,6-diamidino-2-phenylindole, channel for CMAC or differential interference contrast microscopy. Fre8-GFP cells were imaged with a spinning-disk confocal microscope as described (52); 16 × 0.4 μm z-sections were acquired using a 488 nm laser for GFP. Sum intensity projections of ten z-sections are shown, along with the central z-section. Line plot intensity profiles, with a three pixels line width, were generated from the sum projections, and image analyses were carried out using ImageJ 1.51 software.
With data analysis, differences were considered statistically significant when p values were ≤0.05 by applying either a two-tailed t test or a one-way ANOVA with a Tukey's post-test as determined by GraphPad Prism 7 software.
Data availability
All data on ROS production, gene expression, and hyphal length are contained within this article. Additional cell images can be obtained upon request from V. Culotta (Figs. 2 and 3) and M. Bassilana (Fig. 4).
Supporting information
This article contains supporting information.
Conflict of interest
The authors declare that they have no conflicts of interest with the contents of this article.
Acknowledgments
We thank Drs. Julie Gleason, Alexandra Brand, and Peter Sudbery for plasmids and yeast strains and Platforms Resources in Imaging and Scientific Microscopy facility and Microscopy Imaging Côte d’Azur for microscopy support.
Author contributions
G. P. K., A. S. W., and S. B. data curation; G. P. K., A. S. W., S. B., A. N. B., M. B., and V. C. C. formal analysis; G. P. K., A. S. W., S. B., and A. N. B. investigation; G. P. K., A. S. W., S. B., and A. N. B. methodology; G. P. K., M. B., and V. C. C. writing-original draft; G. P. K., A. S. W., S. B., A. N. B., M. B., and V. C. C. writing-review and editing; A. N. B., M. B., and V. C. C. supervision; M. B. and V. C. C. conceptualization; M. B. and V. C. C. funding acquisition; M. B. and V. C. C. project administration.
Funding and additional information
This work was supported by the National Institutes of Health grant R35 GM136644 (to V. C. C.) and by the CNRS and ANR grant ANR-19-CE13-0004-01 (to M. B.). The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
Edited by Ursula Jakob
Supporting information
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Data Availability Statement
All data on ROS production, gene expression, and hyphal length are contained within this article. Additional cell images can be obtained upon request from V. Culotta (Figs. 2 and 3) and M. Bassilana (Fig. 4).