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Elsevier - PMC COVID-19 Collection logoLink to Elsevier - PMC COVID-19 Collection
. 2021 Sep 30;123:103920. doi: 10.1016/j.jbi.2021.103920

A novel deep interval type-2 fuzzy LSTM (DIT2FLSTM) model applied to COVID-19 pandemic time-series prediction

Aref Safari a, Rahil Hosseini a,, Mahdi Mazinani b
PMCID: PMC8482548  PMID: 34601140

Graphical abstract

graphic file with name ga1_lrg.jpg

Keywords: Time series prediction, Type-2 fuzzy logic, LSTM network, COVID-19

Abstract

Currently, the novel COVID-19 coronavirus has been widely spread as a global pandemic. The COVID-19 pandemic has a major influence on human life, healthcare systems, and the economy. There are a large number of methods available for predicting the incidence of the virus. A complex and non-stationary problem such as the COVID-19 pandemic is characterized by high levels of uncertainty in its behavior during the pandemic time. The fuzzy logic, especially Type-2 Fuzzy Logic, is a robust and capable model to cope with high-order uncertainties associated with non-stationary time-dependent features. The main objective of the current study is to present a novel Deep Interval Type-2 Fuzzy LSTM (DIT2FLSTM) model for prediction of the COVID-19 incidence, including new cases, recovery cases, and mortality rate in both short and long time series. The proposed model was evaluated on real datasets produced by the world health organization (WHO) on top highly risked countries, including the USA, Brazil, Russia, India, Peru, Spain, Italy, Iran, Germany, and the U.K. The results confirm the superiority of the DIT2FLSTM model with an average area under the ROC curve (AUC) of 96% and a 95% confidence interval of [92–97] % in the short-term and long-term. The DIT2FLSTM was applied to a well-known standard benchmark, the Mackey-Glass time-series, to show the robustness and proficiency of the proposed model in uncertain and chaotic time series problems. The results were evaluated using a 10-fold cross-validation technique and statistically validated through the t-test method. The proposed DIT2FLSTM model is promising for the prediction of complex problems such as the COVID-19 pandemic and making strategic prevention decisions to save more lives.

1. Introduction

The COVID-19 pandemic was first reported in Wuhan in South China in early December 2019. The cause of the pandemic was later recognized as a novel coronavirus known as SAR-COV-2. As of November 2020, there have been 51,100,521 COVID-19 cases, with 1,324,714 deaths and 32,951,517 recovered cases. The U.S. had the highest number of COVID-19 death cases with 247,000 deaths [1], see Table 1 . During the last few months, several types of research have been conducted to realize the incidence of the disease and modelling uncertainties and prediction of the COVID-19 patterns during time series. The WHO is collecting and encouraging researchers to provide new methods and knowledge on COVID-19 and compiling it in a database to obtain a better strategy for handling this global issue. There are non-stationary time series features in Covid-19 pandemic patterns whose statistical attributes such as means and variances change over time. This study aims to model uncertainty sources associated with non-stationary time series features in real-world applications such as the COVID-19 pandemic.

Table 1.

Comparison of the New Cases, Death and recovered cases based on the WHO top 10 countries (7 Nov 2020).

Country Population Cases Deaths Recovered
USA 330,880,530 9.9 M 237 K 8.3 M
Brazil 212,463,372 5.7 M 163 K 5 M
Russia 145,930,700 1.75 M 31 K 1.3 M
India 1,379,122,578 8.4 M 126 K 8.2 M
UK 67,863,688 1.1 M 49 K 604 K
Peru 32,941,004 1 M 33 K 838 K
Spain 46,753,960 1.4 M 38 K 1.3 M
Italy 60,467,085 900 K 41 K 323 K
Iran 83,921,387 665 K 38 K 510 K
Germany 83,767,456 655 K 12 K 407 K

1.1. Literature review

This section presents an overview of data analytics and computational intelligence models applied to COVID-19 prediction.

In [2], the author described a bioinformatics inference system for modeling the SARS-CoV-2, which focuses on the design of a synthetic vaccine and a preventative peptidomimetic antagonist against the SARS-CoV- 2 with computer-aided techniques. In [3], the authors designed a framework for predicting the incidence of the COVID-19 pandemic based on the data transportation in China and applied machine learning methods for prediction of epidemic spread of Coronavirus driven by Spring Festival Transportation in time-series forecasting. In [3], [4], [5], population-based methods were proposed to predict the candidate targets. These methods used immune responses information through the sequence homology of the COVID-19 patterns. Also, the authors deliberated what could still be done to manage the COVID-19 pandemic with the standard measures of separation and contact tracing in risky countries. A computational spatial–temporal approach for modeling the distribution of SARS-CoV-2 in China was proposed in [6], [7] with a focus on culinary spice bioactive as potential therapeutics against sars-cov-2: computational investigation and data-driven modeling analysis. In [8], the authors proposed a propagation analysis method for modeling the time series. Their research proposed the transmission characteristics of the epidemic at different stages designed based on a Gaussian distribution theory to construct an innovative method of coronavirus transmission during a period.

On the other hand, in [9], [10], the authors describe various data mining and statistical techniques for predicting the COVID-19 pandemic in China with reasonable outcomes. They modeled an estimation of the daily number of new cases. Also, their proposed model emphasizes the control of the infection rates in short time-series. The authors in [11] proposed a deep LSTM approach to predict the SARS-CoV-2 new infection rates. They showed the trends of different countries and compared them to Canadian data to forecast the upcoming infections. They used LSTM to model the ending era of the pandemic in Canada for long time-series, but the challenge of non-optimal parameters in their model affected on the results of their work. Also, a computational intelligence framework for COVID-19 incidence based on a deep neural network technique and a social mimic tuning method associated with fuzzy logic and stacking methods in [12]. They described the dynamics of epidemic incidence of Coronavirus disease during a daily horizon. Also, in [13], the authors model a real-time prediction framework for the COVID-19 pandemic in a monthly format. These models were based on LSTM, convolutional neural network (CNN), and multi-layer perceptron neural nets using the dataset. Meanwhile, a novel SIR method has been proposed to model the pandemic incidence in Pakistan [14]. They projected the epidemic curve as realistic quarantine, social distancing, and probable medication scenarios in a short time-series.

In [15], [16], COVID-19 patients; however, they failed to use reasonable pandemic predictions and described a clinical SIR estimation method for modeling a time-series prediction of the COVID-19 new cases rates in a short time-series based on parameter approximation of time-dependent rates in China and Iran datasets. However, the main issue and limitation of their work is the lack of an appropriate dataset, which affects the reliability of their proposed model. In [17], [18], [19], [20], the authors proposed a dynamic model of the incidence of the viruses based on Auto-regressive integrated moving average (ARIMA), Transmission Dynamics Susceptible Latent Mild Critical Removed (SLMCR), Seasonal-ARIMA and the SIR model to predict the incidence of the COVID-19 in short time series.

The work presented in [21] predicted total cases in the most infected African countries with an ARIMA model in the short time-series. However, their proposed model does not consider the associated uncertainty in the procedure of forecasting. In [22], a comprehensive mathematical hybrid SIR and ARIMA were applied to predict the new cases in a short-term time series of the COVID-19 pandemic but using a limited number of cases in the dataset. Also, an intelligent hybrid ensemble artificial neural network with fuzzy inference aggregation was proposed in [23] for daily prediction of the COVID-19 incidence. Overall, the reviewed literature in this section, such as [15], [16], [21], cannot model the high-ordered uncertainty for the COVID-19 time-series forecasting. On the other hand, most of the related works in the kinds of literature were focused on the short time-series horizon, which is not suitable for strategic predictions. Also, most of the related works used a limited dataset in their model architecture which affects the reliability of their proposed approaches.

1.2. Challenges of the current intelligent methods

During the recent decade, applications of fuzzy logic systems, especially type-2 fuzzy systems in problems with high-order uncertainty, have been emerged, especially for predictions problems with dynamic and non-stationary problems [24]. Various types of research [25], [26], [27], [28] have been reported to model uncertainty using fuzzy set theory. Also, they have been applied to real-world applications through type-2 fuzzy logic systems, mostly in modeling uncertainty, control, and predictions [29], [30], [31]. Also, various neural network models such as recurrent neural networks (RNNs) have been applied to model and predict and model the time series data [11], [12], [32], [33], [34].

It has been proven that the RNNs, especially the LSTM network, have an excellent capability for solving complex problems. The LSTM model can learn the multi-layered inter-relationships between short and long time series [35], [36], [37]. The benefit of an LSTM cell compared to a regular recurrent unit is its cell memory [38]. The cell vector of an LSTM can capture the notion of forgetting part of its earlier stored memory and the part of its new information [39]. These capabilities can be used in the prediction of non-stationary problems [40]. In addition to the general benefits of using RNNs for time series prediction, the LSTM network can also automatically learn the temporal dependence from the data [41]. Hence, by definition, the LSTM has the capabilities of classical non-linear prediction methods to learn an arbitrary complex mapping from inputs to outputs. However, it cannot model the associated uncertainty in non-stationary features.

1.3. Highlights and structure of the article

  • This study takes advantage of type-2 fuzzy logic to develop a new architecture for handling high-order uncertainty in a deep time-series learning model.

  • A novel deep interval type 2 fuzzy LSTM (DIT2FLSTM) model has been proposed to predict non-stationary problems such as the COVOID-19 pandemic.

  • The proposed DIT2FLSTM model is capable for both short- and long time-series forecasting.

The rest of the article is ordered as follows: a theoretical research background has been presented in Section 2; the detailed structure and the mathematical model of the proposed DIT2FLSTM model have been denoted in Section 3; Section 4 presented the performance evaluation and comparison results of the proposed DIT2FLSTM based on ROC curve analysis and t-test statistical evaluation; Section 5 provides the discussion and the comparative results. The paper is concluded in Section 6.

2. Research background

This section presents a brief review of the LSTM network. Then, it follows by a review of interval type-2 fuzzy sets (IT2FS) concepts and the mathematic definitions.

2.1. A review of LSTM network

The LSTMs have been developed to address classic RNNs' limitations by enhancing the gradient vanishing in the network structure. The cell statect in LSTM network stores the long-term information as follows [42]:

Input gate:

it=σWi1zt-1+Wi2yt+Wi3xt+Wi4s+bi (1)

Output gate:

ot=σWo1zt-1+Wo2yt+Wo3xt+Wo4s+bo (2)

Forget Gate:

ft=σWf1zt-1+Wf2yt+Wf3xt+Wf4s+bf (3)

where zt-1 is the hidden state of the LSTM at time t-1and W are the weight matrices,   t  index is the time step, and σ is the sigmoid activation function. Fig. 1 shows the architecture of the LSTM cell.

Fig. 1.

Fig. 1

The architecture of the LSTM cell [42].

Also, the gates adjust the states and hidden cells of the LSTM using the following equations [42]:

Hidden state:

zt=otTanh(ct) (4)

Cell state:

ct=ftct-1+ittanh(Wc1zt-1+Wc2yt+Wc3xt+Wc4s+bc) (5)

where is the element-wise product, and tanh is the activation function.

2.2. A review of interval Type-2 fuzzy Sets.

An interval type-2 fuzzy set represented as A, is characterized through a type-2 MF μA(x,u) where xX and uJx[0,1], [43],

A=x,u,μAx,u|xX,Jx[0,1] (6)

where 0μA(x,u)1, Xis the domain of fuzzy set and Jx is the domain of the secondary MF at x. A is as [46]:

A=xXuJxμAx,ux,uJx0,1 (7)

where represents union overall admissible x and u [44].

A=xXuJx1x,u=xXuJx1ux (8)

where xis the main variable, Jx, an interval in [0,1], is the primary MF of ×, u is the secondary variable, and uJxis the secondary MF at x.

A FOU for a Gaussian primary MF with an uncertain standard deviation is shown in Fig. 2 . The FOU is bounded by an upper MF (UMF) μ¯Axand a lower MF (LMF) μ_A(x), which are type-1 fuzzy sets; consequently. Then, the uncertainty of Ais addressed by the union of all of the primary memberships, called the footprint of uncertainty (FOU) of A , i.e., [FOU(A)], [46] as:

FOU(A)=xXJx (9)

Fig. 2.

Fig. 2

FOU for Gaussian primary membership function [46].

Also, the FOU in the IT2FLS provides more degree of freedom when designing a fuzzy system [48]. An interval type-2 fuzzy system (IT2FS) architecture contains four components. Fig. 3 shows the stricture and components of an IT2FLS.

Fig. 3.

Fig. 3

The structure of the IT2FLS [47].

The TSK fuzzy rule type was considered in the proposed model, which has more precision than Mamdani rules [49]. In this work, the singleton fuzzifier was implemented [50], [51]. For defuzzification in the last step, the Karnik-Mendel (K.M.) algorithm [52] was applied. The following section presents the novel DIT2FLSTM model.

3. The proposed DIT2FLSTM model

This section presents the detailed architecture of the novel DIT2FLSTM model. In 3.1.2, the components of the DIT2FLSTM model are described. Then, in 3.2, the mathematical model of the DIT2FLSTM is presented. Finally, the cell structure of the proposed DIT2FLSTM has been discussed in 3.2.1.

3.1. The architecture of the DIT2FLSTM

The structure of the proposed DIT2FLSTM and it’s layers have been illustrated in Fig. 4 . As shown in this architecture, the DIT2FLSTM is fuzzified using the IT2FS.

Fig. 4.

Fig. 4

The architecture of the DFT2LSTM model.

Input Layer: The first layer is the input layer, which handles the original data in the input of the deep model. The output of the input layer can feed the inputs of the next layer, known as the hidden deep layers.

Encoder, Hidden, and Decoder layers: The main idea is mapping the entire input sequence to a vector and then using an encoder to generate the output sequence. In this layer, the encoder represents the entire input sequence in the hidden layer activities. The DIT2FLSTM model presents a novel cell structure in the encoder/decoder layer. The proposed structure can simply reform according to the dimension of the training time-series data set. The details are described in section 3.2.1 and shown in Fig. 5 .

Fig. 5.

Fig. 5

The proposed cell structure of DIT2FLSTM.

Output Layer: The final layer is the prediction layer which decides and provides the final prediction based on the input features received from the previously hidden layers.

3.1.1. Components of the DIT2FLSTM model

Time series prediction models specify future values of a target yit for a given entity Xi at time t. The next step, prediction, is as follows:

y^i,t+1=Pfyi,t-e:t,xi,t-e:t,t (11)

where y^i,t+1is the predicted value in the next step, yi,t-e:t and xi,t-e:t are observations of the target and observed inputs, respectively, over a look-back window e, and Pfis the prediction function, and the final prediction is produced by Ht:

Pfyi,t-e:t,xi,e-k:t,t,=gdecHt (12)
Ht=gencyi,t-k:e,xi,t-e:t,t (13)

where genc and gdec denote the encoder and decoder functions, respectively. The different parts of the LSTM network in the proposed DIT2FLSTM architecture are given by:

Definition 1

Let N be the number of memory units of the model. In time-stept, i.e., the current time, the network keeps a set of vectors by the following equations:

it=σWixxt+Wimmt-1+Wicct-1+bi (14)
ft=σWfxxt+Wfmmt-1+Wfcct-1+bf (15)
ct=ftct-1+itg(Wcxxt+Wcmmt-1) (16)
ot=σWoxxt+Wommt-1+Wocct+bo (17)
mt=othct (18)
Pf=φWymmt+by (19)

whereσ is the sigmoid function, W signifies the weight matrices, Wix is a matrix of fuzzy weights from the input cell to the output gate, b signifies the bias vector, and i,f,o,and c are the input gates, the hidden (forget) gate, the output gate, and cell activation function, m is the cell output, and is the element-wise product, respectively. However, the hidden unit in this architecture is represented in memory blocks. Each block contains one or a large number of memory cells. This procedure allows these cells to preserve information for a particular time in an uncertain time series and decide which information needs to be stored and when to use it.

3.2. The mathematical model of the DIT2FLSTM

The input variables of the DIT2FLSTM model can be defined as p, xpandxp+1. Moreover, the Takagi Sugeno Kang (TSK) interval type-2 fuzzy inference is applied to describe the input structure of the model as follows:

pRpj1j2:ifxp=Fpj1andxt+1=Fpj2thenyp=c_pj1,j2,c¯pj1,j2j1,j2=1M (20)

where Fpj1 and Fpj2 are respectively the interval type-2 fuzzy sets of the inputs xp and xp + 1 in DIT2FLSTM, M is the number of applied fuzzy rules, c_ij1,j2andc¯ij1,j2 are the endpoints of a fuzzy rule Rpj1j2 or the consequent. The product t-norm technique in Eq.20 is applied to compute the firing interval.

f_lx'=μ_x11x1'××μ_xp'xp'f¯lx'=μ¯x1lx1'××μ¯xp'xp' (21)

The inference part of the DIT2FLSTM model can be entirely characterized by M fuzzy rules for inference process as:

Rl:ifx1isFlandxpisFplThenyisGl (22)

where p is the inputsx1X1,,xpXp And the output y ∈ Y. The following equation represents the membership function as:

μRlx,y=μAG^lx,y (23)

where ∩ signifies the product t-norm operation [43]. The output of each fuzzy rule is Bl=Ax°Rl, with membership functions of μBlyas:

μBly=xXμAxxμAG¯x,y (24)

where ∘ represents the composition operation and ∪ signifies the maximum t-conorm operation [43], and Fl(x´) denotes the firing interval for the fuzzy rule, where x=x´ and Fl is as:

Flx'f_lx',f¯lx' (25)

The firing output set Bl is produced through a fuzzy inference using ruleset and the aggregation of the consequent of as follows [44]:

Bl:FOUBl=μ_B'yx',μ¯B'yx'μB'yx'=f_lx'μ_G'(y)μ¯B'yx'=f¯lx'μ¯G^(y) (26)

where ∗ represents the product t-norm operation. The final output Bl is obtained through the integration of all rule firing sets Bl on the output:

Bl:FOU(B)=μ_Byx',μ¯Byx'μ_Byx'=μ_BMyx'μ¯Byx'=μ¯BMyx' (27)

where ∨ represents the maximum operation. Then the type reduced setYC(x´) is obtained through computing the centroid CB´ of B:

YCx'=CBx'=1lBx',rBx' (28)

where the two points lb(x) and rb(x) are computed through the K.M. algorithm in [45].

3.2.1. The DIT2FLSTM cell structure

In this research, the sigmoid squashing function was used on all the gates for the DIT2FLSTM cell structure as described follows:

σ=11+e-x (29)

The input of the cell uses the following equation:

netc(t)=Wφjyt-1 (30)

The input to the cell passes a non-linear function fφ, as follows:

fφ=41+e-x-3 (31)

In the following equation, the main MFs for each antecedent are defined through Gaussian distribution with uncertain income as follows:

μki(M(k))=exp-12Mk-mkiσki2 (32)

where mkimk1i.mk2i is the uncertain mean, k = 1,2 denotes the number of the antecedents, M denotes the number of the fuzzy rules, and σki is the standard deviation. C in nc represents the number of memory cells in the training phase as follows:

nr×3×nc×no (33)

where nrrepresents the number of rules in the inference engine of the fuzzy module and nois the number of outputs in the LSTM new cell and ncrepresents the number of memory cells in the training phase. Furthermore, the values of the parameters by a ratio of nrnc, and when nr<nc, the system can increase the model memory, denoted by nc, which controls the number of parameters in the recurrent relations and the output layer in the proposed cell structure. The results are multiplied by the output of the gate unit. If the value is close to 0, then the output is not sent to the cell. The structure of the new cell in the DIT2FLSTM model is shown in Fig. 5.

Also, the input enters the cell whenever the input gate is activated. The cell state is defined as follows:

C(t)=itC(t-1)+itt+itgnetct (34)

Then in the output gate of the cell is as follows:

netoutjt=Σmwoutjmymt-1+j=1CjwoutjC(t) (35)

The activation function at the output gate is given by:

L=fφ(netoutjt) (36)

where the cell output is (yc) at the next step for prediction at time t as follows:

yct=netout(t)ct (37)

4. Performance evaluation and experiments

In this section, the DIT2FLSTM model was applied to an official dataset collected from the WHO official website. First, an ROC curve analysis of applying the DIT2FLSTM model to the official dataset is presented. Then a statistical evaluation of the DIT2FLSTM has been conducted to represent the model's capability for both short and long time-series predictions.

4.1. Applied data set on DIT2FLSTM model

The dataset contains the latest public data on the COVID-19 pandemic, including daily updates. This dataset includes detailed information about the number of confirmed cases, confirmed death, and confirmed recovery cases during the COVID-19 pandemic (February 2019 to November 2020).

4.2. An ROC curve analysis of the DIT2FLSTM model

In this section, an ROC curve analysis was conducted to have a reliable estimate of the performance of the DIT2FLSTM model, and the results were statistically verified as follows:

Precision=TPTP+FP×100% (38)
Recall=TP(TP+TN)×100% (39)
F-Measure=2"PrecisionRecallPrecision+Recall (40)
Accuracy=TP+TNTP+FP+FN+TN (41)
μi=110k=110AUCj (42)

where μi is the means of the accuracy of the ROC curve for the 10-fold cross-validation. A 10-fold cross-validation technique was applied, randomly partitions the original sample into k equal sized subsamples. A single subsample is retained as the validation data for testing the model from the ten sub-samples, and the remaining nine are used as training data. This research was repeated ten times, while each subsample was used exactly once as validation test data. The obtained results of 10-fold cross-validation are reported in Table 2 . Table 3 presents the accuracy and the network size of the proposed DIT2FLSTM model based on various datasets for different network sizes, including various numbers of cells and depths of layers. The results reveal that the DIT2FLSTM withs 20 layers and 3000 cells were the most robust configuration, which reported the best performance during the prediction process as depicted in Fig. 6 .

Table 2.

10-fold cross-validation result of applying the DIT2FLSTM to the WHO top-10 incidence countries.

Fold # USA Brazil Russia India UK Peru Spain Italy Iran Germany
1 *91.88% 94.77% 97.67% 91.63% 90.65% 95.50% 95.67% 96.54% 94.76% 96.80%
2 90.25% 93.05% 92.29% 95.09% 95.88% 94.79% 94.92% 95.16% 91.08% 94.65%
3 90.12% 91.87% 95.98% 96.28% 93.67% 96.02% 91.84% 90.65% 90.87% 95.76%
4 91.19% 93.07% 92.08% 90.65% 93.16% 91.85% 92.56% 90.45% 92.90% 93.60%
5 92.89% 91.56% 95.03% 95.47% 92.03% 95.79% 93.73% 92.86% 94.55% 93.55%
6 90.93% 92.93% 97.86% 96.93% 95.73% 94.49% 91.98% 90.76% 96.00% 94.09%
7 93.69% 92.99% 93.78% 93.88% 94.59% 92.95% 94.92% 92.62% 94.67% 93.97%
8 94.18% 93.05% 95.79% 94.61% 93.29% 91.95% 92.00% 93.52% 94.90% 93.00%
9 93.59% 96.69% 94.87% 90.94% 92.68% 92.11% 93.15% 95.00% 92.45% 95.06%
10 94.87% 95.81% 92.23% 92.04% 94.77% 93.57% 94.65% 93.91% 93.75% 90.51%
Mean 92.35% 93.57% 94.75% 93.75% 93.64% 93.90% 93.54% 93.15% 93.59% 94.10%
*

The obtained accuracy is an average percentage of three cases, including new cases, recovery, and deaths in its fold number.

Table 3.

Training accuracy with different Cells and Layers of the proposed DIT2FLSTM.

Cell Depth Network Size USA Brazil Russia India UK Peru Spain Italy Iran Germany Accuracy
10,000 8L Underfit 87 86 84 82 81 85 89 90 86 90 84.16%
7000 10L Underfit 82 84 80 82 82 84 86 90 88 92 82.33%
5000 15L Overfit 95 96 98 96 94 95 93 92 92 94 95.66%
3000 20L Fine Tuned 96 98 97 96 98 93 94 93 94 95 96.33%

Fig. 6.

Fig. 6

ROC curve analysis for the DIT2FLSTM model.

4.3. Statistical evaluation of the DIT2FLSTM

In this section, the proposed DIT2FLSTM model was applied to both Mackey-Glass as a global benchmark and COVID-19 time series to show the proposed model's capability for predicting short and long time series. On the other hand, to perform a statistical evaluation of the performance of the proposed method, a t-test was conducted to validate the obtained results.

4.3.1. DIT2FLSTM applied on Mackey-Glass

This section presents the experimental results of applying the proposed DIT2FLSTM prediction method to the Mackey-Glass time series. The proposed DIT2FLSTM model was evaluated on a high-dimensional chaotic time-series system generated by the Mackey-Glass delay differential equations as follows:

dx(t)dt=-0.1xt+0.2xt-tΔ1+xt-tΔ10 (43)

where tΔ is the delay of the time series. Furthermore, a statistical test was conducted on applying the DIT2FLSTM to the Mackey-Glass time series through t-test. First, we calculate the mean of observation as follows [53]:

t=X¯-tΔs×n (44)

where, X¯ is the sample mean, tΔ is the time delay mean, s is the sample size, and S is the standard deviation as follows [53]:

S=i=1nXi-X¯2n-1 (45)

Also, the RMSE was computed to assess the error of the DIT2FLSTM model in the Mackey-Glass time-series. The detailed calculation of RMSE is given by:

RMSE=1ni=1ny^k-yk2 (46)

where y^k denotes the forecasted value, and yk is the actual value. Fig. 7 shows the statistical analysis of the DIT2FLSTM model on Mackey Glass time-series.

Fig. 7.

Fig. 7

Statistical analysis of the DIT2FLSTM model for Mackey Glass time-series as a global benchmark.

Also, the obtained results showed that the minimum error of the DIT2FLSTM model was 0.00251, and the average error was 0.00301. Table 4 shows the quantitative comparison of DIT2FLSTM uncertainty in Mackey-Glass and COVID-19 datasets.

Table 4.

Comparison of DIT2FLSTM in Mackey-Glass and COVID-19.

Samples Mackey Glass
COVID-19
RMSE STD Mean RMSE STD Mean
100 1.2672 0.0351 0.127 0.1021 1.2672 0.097
1000 0.9821 0.0267 0.086 0.0537 0.9821 0.076
5000 0.5231 0.0171 0.089 0.0315 0.5231 0.071
10,000 0.2176 0.0149 0.084 0.0208 0.2176 0.044

4.3.2. Null hypothesis and left tailed t-test

In this section, a two-sample t-test (left tailed) has been conducted. The null hypothesis was defined as [54], [55]: H0 = μi>μjand, H1: μi<μj, where μi and μj are the means of the area under the ROC curve (AUC) of DIT2FLSTM and IT2FLS for ten different iterations of 10-fold cross-validation assessment. The obtained results of the t-test analysis are shown in Table 5 , which demonstrates the advantage of the proposed DIT2FLSTM method for COVID-19 time-series prediction compared to the IT2FLS. The obtained results in Table 5 shows that the t-test failed to reject the null hypothesis.

Table 5.

Left-tailed T-test analysis of the DIT2FLSM and IT2FLS.

Fold# DIT2FLSTM IT2FLS
1 0.9071 0.7434
2 0.9212 0.7291
3 0.9252 0.6359
4 0.8905 0.6301
5 0.9421 0.7218
6 0.9312 0.7925
7 0.9651 0.7651
8 0.9426 0.7271
9 0.9667 0.8112
10 0.9821 0.8214
Mean 0.9673 0.8277

4.4. Comparison analysis of the results

In this section, Table 6 presents a comparison of conventional methods and the proposed DIT2FLSTM model. According to the obtained results, the proposed DIT2FLSTM model has reported the highest performance compared to the counterpart models, including the LSTM, IT1FLS, IT2FLS, T1FLSTM, and T2ANFIS for the COVID-19 time-series prediction.

Table 6.

Comparison of conventional methods and DIT2FLSTM model.

Method AUC% CI% Recall Precision F-1
IT1FLS 79.23 [77–81] 78.52% 79.67% 80.33%
IT2FLS 82.07 [80–85] 81.23% 82.41% 82.77%
LSTM 90.92 [87–92] 91.79% 92.24% 90.33%
Fuzzy-LSTM 92.05 [88–93] 91.76% 92.27% 91.17%
IT2ANFIS [30] 91.21 [89–93] 92.15% 91.15% 90.53%
DIT2FLSTM 96.00 [92–97] 96.17% 95.83% 95.26%

Meanwhile, the time-series complexity was determined by the number of computational steps needed to run the algorithm of the DIT2FLSTM as a function for several data samples as the input size. Time measurement was computed by order of the models and consumption, including the hour, minute, and seconds (00:00:00) as shown in Table 7 , where N is the number of instructions and M  is the input size.

Table 7.

Complexity Comparison of DIT2FLSTM and counterparts.

Model Order Time Consumption
IT1FLS O(1) + O(N) 0:00:32
IT2FLS O(N) + O(M*N) 0:00:48
LSTM O(1) + O(M*N) 0:00:42
T1-LSTM O(1) + O)log(M*N)( 0:01:13
T2-ANFIS [30] (4*O(1) + O(N2)) 0:01:34
DIT2FLSTM (6*O(1) + O(N*M) + O(N2) 0:01:43

Fig. 8 illustrates the cumulative representation of the COVID-19 prediction. This figure shows the associated uncertainty in prediction of the new case, death, and recovery for COVID-19 time-series.

Fig. 8.

Fig. 8

Illustrations of associated uncertainty in different time steps.

The prediction results of the 10-top countries based on the proposed DIT2FLSTM model are shown in Fig. 9 . Also, in the final part of this section, the DIT2FLSTM model has been compared to related works in Table 8 .

Fig. 9.

Fig. 9

DIT2FLSTM predictions of new cases (Blue), recovered (Green), and deaths (Orange) in top-10 countries. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)

Table 8.

A comparison of the DIT2FLSTM model and related works.

Methodology Prediction Factor Horizon
Time-dependent dynamic SIR [14] New cases Daily
Generalized Additive SIR [16] Death cases Daily
Transmission Dynamics Susceptible-Latent-Mild-Critical-Removed (SLMCR) [18] New cases Monthly
Modified SEIRD with ARIMA and Transition Dynamic [19] Susceptible, Exposed, Infective, Recovered, Death Daily
ARIMA (Auto-Regressive Integrated Moving Average) [20] Confirmed Cases Daily
Fuzzy Arima [21] Recovery cases Daily
Hybrid Sir-ARIMA [22] New cases Daily
LSTM network [11] New cases Weekly
Neuro-fuzzy [23] New cases Daily
DIT2FLSTM New cases, death, and recovery Daily and Monthly

5. Discussion

Experimental results revealed that the proposed DIT2FLSTM model had reported reliable results based on the real COVID-19 datasets obtained from the official WHO websites. Moreover, the ROC curve analysis shows 96% (AUC) performance for the DIT2FLSTM model for COVID-19 prediction on the WHO dataset. The experimental results revealed that the performance of the proposed DIT2FLSTM model was better than its counterparts; i.e.,17% greater than T1FLS, 14% greater than IT2FLS, 6% greater than LSTM, 4% greater than T1FLSTM, and 5% better than the IT2ANFIS, in terms of the AUC. The proposed DIT2FLSTM model has an average AUC of 96% with a 95% confidence interval [92–97] % to predict the mortality rate of the COVID-19 pandemic. Also, to show the proficiency of the proposed DIT2FLSTM, a Mackey-Glass-time series with a delay equation was applied. The minimum error of the DIT2FLSTM model was 0.00251, where the average error was 0.00301 in terms of the RMSE.

This research presents the DIT2FLSTM model for predicting the COVID-19 time series as a real-world challenge. However, the capability of the proposed model is not limited to this specific application. Furthermore, the proposed DIT2FLSTM model has the potential to be applied to other biomedical applications, including biopharmaceutical and clinical studies in horizon of time series.

6. Conclusion

In this study, a novel DIT2FLSTM model was proposed to predict the incidence of new cases, recovery cases, and mortality rates of the COVID-19 pandemic. The proposed DIT2FLSTM model was applied to the WHO global dataset. The proposed DIT2FLSTM model can be applied to the uncertain and chaotic time series for short and long time series prediction. The obtained results show that the proposed DIT2FLSTM model is proficient at coping with the uncertainty to model phenomena such as the COVID-19 pandemic. Additionally, the model can easily get updated when new cases are reported because of its deep architecture. Further studies are suggested for tuning the DIT2FLSTM cell structure parameters and applying them to other real-world applications associated with non-stationary uncertainties. The optimization techniques such as evolutionary algorithms can be applied to improve the performance of the DIT2FLSTM model.

CRediT authorship contribution statement

Aref Safari: Conceptualization, Methodology, Visualization, Investigation, Validation, Programming, Writing- Original draft preparation. Rahil Hosseini: Supervision, Methodology, Validation, Writing preparation, Reviewing, Editing. Mahdi Mazinani: Consultant, Reviewing.

Declaration of Competing Interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Footnotes

Appendix B

Supplementary data to this article can be found online at https://doi.org/10.1016/j.jbi.2021.103920.

Appendix A.

The notations, petameter, and the variables of the proposed DIT2FLSTM model are summarized and described in Table 9 .

Table 9.

Notations for the components of the DIT2FLSTM model.

No Notation Petameter and variables
1 it Input gate at time t
2 ot Output gate at time t
3 ft Hidden (forget) gate at time t
4 genc Encoder function
5 gdec Decoder function
6 fφorσ Activation function (Sigmoid)
7 element-wise product
8 tanh Hyperbolic tangent
9 U The hidden layer weight matrix
10 W Wight metric
11 Wix Input weight matrix
12 e Look-back window
13 Zt Hidden cell at time t
14 Zt-1 Hidden cell state at time t-1
15 t Timestep
16 b Bias
17 Fp Interval type-2 fuzzy set for input p
18 Rp The fuzzy rule for input p
19 Fl(x´) Firing interval of fuzzy rule
20 cij1,j2 endpoints of the consequent of a rule in cell
21 μRl The MF of the rule in a cell
22 t-norm
23 Bl The output of the fuzzy rule
24 composition operation
25 t-conorm
26 Product t-norm
27 Maximum operations
28 YC Type-redacted of cell output
29 lb Left boundary
30 rb Right boundary
31 k Number of Antecedent
32 netcj The input of a cell
33 yc The output of a cell
34 netinj Net of an input gate
35 netφj Net of a forget gate
36 netoutj Net of an output gate
37 C Number of the memory cell
38 ct Cell state at time t
39 m Mean
40 N Number of memory units
41 L activation function at output gate

Appendix B. Supplementary data

The following are the Supplementary data to this article:

Supplementary data 1
mmc1.zip (878.2KB, zip)

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mmc1.zip (878.2KB, zip)

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