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. 2020 Jun 2;5(3):e00282-20. doi: 10.1128/mSystems.00282-20

TABLE 3.

SNPs mapped in the mutants with low susceptibility to fosfomycin

Mutant Position
of the
reference
sequence
SNP Locus Gene Amino
acid
changea
Product Old locus
tag
Provean
scoreb
SNP domain
FOS1 1829461 A:T>G:C SMD_RS08765 eno p.D398G Enolase SMD_1655 −6.77 C-terminal TIM
barrel domain
FOS4 1411119 C:G>T:A SMD_RS06650 gpmA p.P212L Phosphoglycerate
mutase
SMD_1268 −9.88 Histidine
phosphatase
superfamily
FOS7 3798418 G:C>C:G SMD_RS17680 gapA p.D296G Glyceraldehyde-3-
phosphate
dehydrogenase
SMD_3406 −3.37 NAD binding
domain
FOS8 3793349 G:C>A:T SMD_RS17665 pgk p.Q50ST Phosphoglycerate
kinase
SMD_3403 N-terminal
domain,
containing the
substrate binding
site
a

ST, stop mutation.

b

Provean deleterious score threshold of the changes is −2.5. Any SNP is located in a catalytic site of the corresponding enzyme.