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. 2021 Oct 2;11(10):678. doi: 10.3390/metabo11100678

Table 4.

Outline of second PubMed query to obtain metabolomics software tools papers based on metabolomics and software-related keywords and MeSH terms.

Concept Metabolomics Software
Keywords Metabolomics
Metabonomics
Metabolonics
Metabolite
Multiomic
Mixomic
Metabolome		 Algorithm
Toolkit
Code
Software (framework/pipeline/tool/package/suite/workflow)
Open source
Source code
Web application
Command line
Programming language
Github
Gitlab
Sourceforge
Bioconductor
Bio(python/java/ruby)
Controlled Vocabulary (MeSH) Metabolomics
Metabolome		 Computing Methodologies