Abstract
Background:
Pediatric endogenous Cushing syndrome is mainly caused by pituitary corticotropin-producing adenomas and most glucocorticoid-dependent effects progressively regress upon tumor removal. Endogenous Cushing syndrome reproduces long-term high-dose glucocorticoid therapy, representing a clean, natural and unbiased model in which to study glucocorticoid bona-fide effects on immunity.
Objectives:
To perform extensive immunologic studies in otherwise healthy pediatric patients with endogenous Cushing syndrome before and 6–13 months after tumor resection, as well as in in-vitro glucocorticoid-treated control cells.
Methods:
Flow cytometry, immunoblotting, ELISA, qRT-PCR and RNA-seq techniques were used to characterize patients’ and in-vitro glucocorticoid treated cells.
Results:
Reduced thymic output, decreased naïve T cells, diminished proliferation, and increased T-cell apoptosis were detected before surgery, and all these defects eventually normalized after tumor removal in patients. In-vitro studies also showed increased T-cell apoptosis, with correspondingly diminished NF-κB signaling and IL-21 levels. In this setting, IL-21 addition upregulated anti-apoptotic BCL2 expression and rescued T-cell apoptosis in a PI3K pathway-dependent manner. Similar and reproducible findings were confirmed in endogenous Cushing syndrome patient cells as well.
Conclusions:
We identified decreased thymic output and lymphocyte proliferation, together with increased apoptosis, as the underlying causes to T-cell lymphopenia in endogenous Cushing syndrome patients. IL-21 was decreased in both natural and in-vitro long-term high-dose glucocorticoid environments, and in-vitro addition of IL-21 counteracted the pro-apoptotic effects of glucocorticoid therapy. Thus, our results suggest that administration of IL-21 in patients receiving long-term high-dose glucocorticoid therapy may contribute to ameliorate lymphopenia and the complications associated to it.
Keywords: NF-κB, PI3K, BCL2, cytokines, interleukins, infections
Graphical Abstract

eCs: endogenous Cushing syndrome; LTHD: long-term high-dose; Check marks indicate within normal ranges; Red arrows indicate abnormal results; Green arrows indicate improved results
Capsule summary:
Pediatric patients with endogenous Cushing syndrome, and an in-vitro model, were evaluated to determine the bona-fide glucocorticoid effects on immunity. IL-21, regulated by the NF-κB and acting through the PI3K pathways, controlled glucocorticoid-mediated T-cell apoptosis.
Introduction
Glucocorticoids have been part of the medical armamentarium for almost 80 years, first as replacement therapy for adrenal insufficiency starting in the 1930s and then for the treatment of rheumatologic diseases beginning in the 1940s1. Since then, long-term high-dose (LTHD) glucocorticoid treatment has been the therapeutic cornerstone of an extensive list of diseases including but not restricted to rheumatologic diseases (e.g., systemic lupus erythematous, polyarteritis nodosa, Churg-Strauss disease, giant cell arteritis, and rheumatoid arthritis among others), renal diseases (e.g., nephrotic syndrome and membranous glomerulonephritis), allergic diseases (e.g., atopic dermatitis), pulmonary diseases (e.g. asthma, allergic bronchopulmonary aspergillosis), dermatological disease, gastrointestinal diseases, liver diseases, as well as non-malignant and malignant hematologic diseases (e.g., autoimmune thrombocytopenia, leukemias and lymphomas)2–4. Taken in aggregate, these various conditions affect ~1% of adults living in developed counties and receiving LTHD glucocorticoid treatment, and this percentage is increasing5. In a study conducted between 1999 and 2005 based on the National Health and Nutrition Examination Survey (NHANES), the weighted prevalence of LTHD glucocorticoid use in the United States among individuals ≥ 20 was 1.2% (95% CI 1.1–1.4)6, and a study run over 20 years in the United Kingdom in individuals ≥ 18 years old showed, LTHD glucocorticoid treatment in 0.75%, with a 34% increase in use over the course of the study7.
As the use of LTHD glucocorticoid has increased over the years, its effects on immune system cells have become more evident8, 9. However, recognition of the specific bona-fide effects of LTHD glucocorticoid therapy on immune function have been limited by comorbidities and the underlying confounding immunologic conditions in patients receiving such therapy10–13. Here, we focused our studies on pediatric endogenous Cushing syndrome (eCs) patients with corticotropin (ACTH)-producing pituitary adenomas as a means of studying long-term effects of steroids in-vivo. All patients were previously healthy and lacked comorbidities. Importantly, their eCs phenotype resembled LTHD glucocorticoid use, and clinical and immunological parameters tended to progressively normalize over 6–13 months after successful tumor removal (Post). Our immunological studies were performed pre- and post-surgery, representing LTHD glucocorticoid therapy and withdrawal. Moreover, beyond characterizing the LTHD glucocorticoid bona-fide impact on human immunity, we also explored the role of cytokines in particular IL-21, rescuing such effects. As previously shown by our and other groups, IL-21 seemed to have a protective and restorative effect on murine models regarding thymopoiesis/lymphopoiesis under particular conditions, including aging, hematopoietic stem cell transplantation and glucocorticoid treatment14, 51–54.
Methods
Patients
All study participants and their parents provided assent and informed consent, respectively, to this study, which was approved by the Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD) institutional review board (IRB). Samples from 31 pediatric patients with eCs due to ACTH-producing adenoma were collected and evaluated as follows: paired samples from 15 eCs patients (age range 7–16 years old, 8 females) were collected before and 6–13 months post-surgical treatment (Post); non-paired samples from 8 eCs (age range 11–16 years old, 6 females) and 8 Post (age range 9–19 years old, 4 females) different patients were also available for study.
Studies
Immunological studies included: a) white blood cell counts and extensive lymphocyte subset enumeration, including extracellular and intracellular proteins, T cell receptor (TcR) Vβ repertoire, as well as functional responses to cytokine stimulation; b) lymphocyte proliferation to mitogens and TcR stimulation; c) lymphocyte apoptosis in response to glucocorticoids and other apoptosis inducers in the presence or absence of IL-2, IFN-α or IL-21; d) IL-21 plasma levels, mRNA expression, and intracellular protein expression; e) IκBα degradation; and f) RNAseq on CD4+ naïve T cells. Technical details are described in the Supplementary Appendix, Materials and Methods.
Results
eCs patient’s diagnosis and characterization
Diagnosis of eCs in the 31 patients studied was established according to the Endocrine Society guidelines by increased midnight serum cortisol and urinary free cortisol levels as previously reported15–19 (Figure 1A). Diagnosis of ACTH-producing adenoma was confirmed by histopathology analysis in each case (not shown). Patient demographic data is summarized in Table S1.
Figure 1.

Cortisol (PM and free urinary), white blood cells, and basic lymphocyte phenotype in eCs and Post patients
A. Midnight serum cortisol values (left), UFC (Urinary Free Cortisol, right) in eCs and Post patients. B. Lined dots indicate the absolute neutrophil count (left), and absolute lymphocytes (right) in each individual patient (n= 15). C. Representative flow cytometry plots of CD3+ (T cells) versus CD19+ (B cells) on the left; on the right, percentage and absolute numbers of CD3+ T cells. D. CD4/8 ratio in eCs and Post patients (n= 10). The CD4/8 ratio (left), absolute CD4+ (middle) and CD8+ T cells (right) is represented by lined dot graphs (n= 10). E. Recent Thymic Emigrants (RTE) were detected by staining CD3+CD4+CD45RA+CD31+ in eCs and Post patients (n= 10). F. Naïve CD4+ T cells; CD3+ gated T cells were analyzed by CD4+CD45RA+CCR7+. The gray shade indicates the normal pediatric range of each test. PBMCs from 10 paired patients were analyzed by paired t-test in each group. * P < 0.05; ** P < 0.01; *** P < 0.001; ****P<0.0001.
T cell lymphocytes in eCs patients
We first analyzed cell counts in eCs and Post pediatric patients. Total white blood cell (WBC) and polymorphonuclear leukocytes (PMN) cell counts were both markedly increased in eCs patients; monocytes and dendritic cells showed no statistical differences between the two groups; and lymphocytes were significantly lower in eCs than in Post patients (Figure 1B, Figure S1A Table S2). These results are consistent with findings previously reported in patients with eCs and patients undergoing glucocorticoid treatment15–19. We next further characterized the lymphocyte subsets in eCs and Post clinical settings. No significant differences were detected in the absolute number of B cells and NK cells (Figure S1B–D, Table S2), but marked differences were observed in T cells, with paired patient samples showing significantly reduced T cells in the eCs condition as compared to samples at 6–13 months post-surgery (Post) (Figure 1C). This effect was greatest on CD4+ T cells, whereas no significant difference in absolute CD8+ T cell numbers was observed between eCs and Post (Figure 1D). Significantly lower total CD4+ T cells were detected in the eCs condition, as was the case when CD4+ specific T cell subsets, including recent thymic emigrants (RTE) (Figure 1E), naïve CD4+ T cells (Figure 1F), CD4+ T regulatory (Treg) cells (Figure S1E) and T follicular helper (Tfh) cells (Figure S1F), were individually evaluated. Evaluation of Th0, Th1, Th2 and Th17 populations based on their intracellular cytokine production pattern (e.g., IL-2, IFNγ, IL-4, and IL-17), demonstrated no change in relative percentage were detected between eCs and Post conditions (Figure S2A). Moreover, no differences were detected either in T cell receptor (TcR) variable beta (Vβ) family distribution in CD4+ or CD8+ T cells (Figure S3) or absolute CD57+ and PD-1+ senescent CD8+ cells in eCs versus post patients (Figure S1G and H). While the low lymphocyte thymic output, as evidenced by significantly reduced RTE cells, likely contributed to the T cell lymphopenia in the eCs patients under LTHD glucocorticoid exposure, other possible mechanisms were also evaluated. Lymphocyte proliferation by both CD4+ and CD8+ T cells was markedly decreased in response to TcR-mediated stimulation (anti-CD3 + anti-CD28 antibodies) or mitogen (phytohemagglutinin) in the eCs condition (Figure 2A). As glucocorticoids are known to induce lymphocyte apoptosis20, 21, we also assessed apoptosis in eCs and Post patient cells using Annexin V staining of total CD4+ and CD8+ T cells, as well as of naïve CD4+ and naïve CD8+ T cells. Annexin V interacts strongly and specifically with phosphatidylserine, a phospholipid that is externalized relatively early during apoptosis. While other methods are available, Annexin V corresponding signal provides a sensitive, specific and validated method for detecting cellular apoptosis22–26. Apoptosis was strongly increased in CD4+ and CD8+ T cells in general, particularly in naïve cells in eCs patients (Figure 2B, C). Taken together, these findings suggest that lymphopenia in eCs patients is multifactorial and may be explained by the sum of reduced thymic output of T cells, reduced proliferation capacity (to both TcR-dependent and - independent triggers), and increased levels of apoptosis-mediated T-cell death.
Figure 2.

Cell proliferation and cell death via apoptosis in eCs and Post patients
A. Gated on CD3+CD4+ or CD3+CD8+ T cell proliferation via TcR signaling (anti-CD3 + anti-CD28) or mitogenic stimulation (PHA) in HC, eCs and Post patients. The paired patients PBMC were analyzed by unpaired t-test in each group (n=4). Representative (left, histograms) and aggregate data of n=4 individuals per group tested (right, bar graphs) are shown. B. Apoptosis was measured by Annexin V staining on CD4, naïve CD4 T cells (CD3+CD4+CD45RA+CCR7+), CD8 and naïve CD8 T cells (CD3+CD8+CD45RA+CCR7+) in eCs (top) and Post patients (bottom). C. The lined dot graph indicates the percentage of apoptotic cells in each cell subsets between eCs and Post patients (n=5). PBMCs from 5 paired patients were analyzed by paired t-test in each group. * P < 0.05.
Cytokine modulation of apoptosis and IL-21-mediated effects
To evaluate apoptosis and its cytokine-mediated modulation using an eCs-mimicking condition, peripheral blood mononuclear cells (PBMC) from healthy controls (HC) were incubated in-vitro with dexamethasone 1.0 μg/mL as reported elsewhere27–29 to reproduce the apoptosis levels detected in eCs patients. Primary CD4+ T cells from eCs patients’ PBMC showed apoptosis levels 10.2–34.1% (Figure 2C). When different concentrations of dexamethasone were evaluated (i.e., 0/.001/0.01/0.1/0.2/0.5/1.0/2.0/5.0/10.0 μg/mL) on HC PBMC, apoptosis ranges similar to those shown on eCs patients’ CD4+ T cells were achieved on the 0.1–1.0 μg/mL dose range (Figure S4). Dexamethasone was chosen as it is a long-acting glucocorticoid that does not require re-stimulation during overnight culture periods (consistent with LTHD glucocorticoid effect).
Prednisolone 1 and 5 μg/mL were also evaluated in the absence or presence of IL-2, IFNα and IL-21 to evaluate their modulatory effects of apoptosis associated with another type of glucocorticoid exposure (Figure S5). Apoptosis was determined in total CD4+ and CD8+ T cells as well as in naïve CD4+ T cells. (Figure 3A, Figure S6A). While incubation of PBMC from HC with glucocorticoids increased apoptosis of total and naïve CD4+ T cells (arbitrarily defined as 100%), the addition of IL-2 or IFNα reduced it by ~50%, whereas addition of IL-21 to control PBMC under the same conditions, reduced glucocorticoid-induced apoptosis by more than 80%, representing a level of apoptosis similar to that seen at baseline/non-glucocorticoid stimulated condition (Figure 3A and 3B). To determine the specificity of the IL-2, IFNα and IL-21-mediated rescue of apoptosis in glucocorticoid-treated cells, we tested their effects on staurosporine- and FAS-mediated apoptosis. Neither IL-2, IFNα, or IL-21, modulated apoptosis upon stimulation with either of these pro-apoptotic agents (Figure S7). Next, we evaluated the expression of BCL6, an IL-21-regulated molecule; and BCL2, an anti-apoptotic molecule. As anticipated, BCL6 expression was only upregulated in the glucocorticoid+IL-21 stimulated condition, but not in non-glucocorticoid stimulated cells, glucocorticoid stimulated cells or following IL-2 or IFNα addition in naïve CD4+ T cells (Figure 3C) or CD8+ T cells Figure S6B). On the other hand, while no cytokine alone modulated BCL2 expression, its level was upregulated in response to glucocorticoid+IL-21 in CD4+ (Figure 3D and E) and CD8+ (Figure S6C) T cells. When we assessed apoptosis in PBMC from eCs patients who were exposed to endogenous LTHD glucocorticoids (Figure S8A), IL-21 was again more anti-apoptotic than IL-2, and this correlated with a specific upregulation of BCL2 levels; paralleled increases in BCL6 were also detected, linking IL-21 signaling to these effects (Figure S8B and C).
Figure 3.

Regulation of T cell apoptosis by IL-21 treatment
A. Healthy donors’ PBMC were incubated without (left) or with (right) dexamethasone (1μg/mL) in the different combination with IL-2, IFNα and IL-21 for overnight. Apoptosis was measure by Annexin V staining. B. The bar graph shown the percentage of apoptosis (Annexin V) on naïve CD4+ T cells following treatment with dexamethasone (n=5). The bar graph represented the percentage of apoptosis by normalization with DEX solely treated sample as 100%. C-D. BCL6 (C) and BCL2 (D) expression was detected in the absence or presence of dexamethasone (1μg/mL) with additional incubation with IL-2, IFNα or IL-21. E. The bar graph represents the BCL2 (MFI) after dexamethasone and indicated cytokine incubation (n=3). F-G. Apoptosis was determined by Annexin V staining after dexamethasone +/− IL-21 overnight incubation of PBMCs with BCL2 inhibitor (iBCL2) or BCL6 inhibitor (iBCL6) (vehicle (DMSO) was included in the negative control). Statistical analysis for B and E: one-way ANOVA correcting for multiple comparison using the Tukey method; for G: and two-way ANOVA correcting for multiple comparison using the Sidak method. * P < 0.05; ** P < 0.01; *** P < 0.001.
To further assess the role of BCL2 as the anti-apoptotic driver following IL-21stimulation in glucocorticoid-stimulated cells and to discriminate it from the potential role of BCL6, we tested the effects of the inhibitor of BCL2 (iBCL2) S55746 and the inhibitor of BCL6 (iBCL6) 79–6 on BCL2 and BCL6 expression and the level of apoptosis in unstimulated, as well as glucocorticoid, and glucocorticoid+IL-21 stimulated cells. First, we measured the effect of iBCL2 and iBCL6 on BCL2 and BCL6 expression (Figure S9). While glucocorticoids decreased and IL-21 rescued BCL2 expression, iBCL2 and iBCL6 had no direct effect on BCL2 expression in any of the testing conditions. Regarding BCL6, glucocorticoids had minimal or no effect on BCL6 baseline expression, but addition of IL-21 markedly upregulated it in the absence or presence of iBCL2 and iBLC6. Moreover, addition of iBCL6 did not affect BCL6 expression either by itself, with or without glucocorticoids or IL-21. When the antiapoptotic effects of iBCL2 and iBCL6 were evaluated (Figure 3F), iBCL2 but not iBCL6 increased the apoptosis rates in unstimulated cells (from ~23% to ~47%). When cells were incubated with glucocorticoids or glucocorticoids+iBCL6, apoptosis was increased similarly (both ~50%) but was further increased following dexamethasone+iBCL2 treatment (~80%). Finally, IL-21 was able to rescue apoptosis in cells incubated with glucocorticoid or glucocorticoid+iBCL6 (~25%), but not after glucocorticoid+iBCL2 incubation (~75%). It is noteworthy that the levels of apoptosis found in cells treated with glucocorticoid+iBCL2 or glucocorticoid+IL-21+iBCL2 were very similar (~80% vs. ~75%) (Figure 3G). Other BCL2-family members, including MCL1 (anti-apoptotic) and BIM (pro-apoptotic), had no effect on apoptosis after cytokine stimulation (i.e., IL-2, IFNα or IL-21), in the presence or absence of glucocorticoids (Figure S10A and B). These data confirm that the IL-21 mediated antiapoptotic effect seems almost exclusively dependent on BCL2 with very little evidence for the involvement of other BCL2-family members, including no antiapoptotic role for BCL6 detected in this model system either.
On further testing, the rescue of apoptosis and modulation of BCL2 and BCL6 expression by IL-21 were not observed in cells from an IL21R-deficient patient carrying a known, disease-causing homozygous mutation (IL21R, c.240_245delCTGCCA; p.Cys81_His82del), providing extra support that the anti-apoptotic effects observed were dependent on IL-21 signaling (Figure S11A–C). Taken together these results show that glucocorticoids, whether exogenous or endogenous, are inducers of T-cell apoptosis. Furthermore, although glucocorticoid-induced apoptosis was decreased by the addition of IL-2, IFNα or IL-21, IL-21 had the most dramatic anti-apoptotic effect and this effect correlated with increased expression of the anti-apoptotic molecule BCL2.
IL-21 biology in eCs and Post patients
To evaluate IL-21 biology in patients under LTHD glucocorticoid exposure, we measured IL-21 plasma concentrations, IL-21 receptor (R) expression and IL-21 signaling in eCs and Post patients. While IL-21R expression (Figure S12) and IL-21 (as well as IL-2 and IFNα signaling (Figure S13) were not different among eCs, Post, and HC, IL-21 levels in plasma were significantly lower in the eCs patients when compared to HC or Post patients (Figure 4A). Furthermore, IL-21 mRNA levels correlated with IL-21 plasma levels in all clinical settings (Figure 4B), strongly suggesting that a glucocorticoid-mediated reduction in IL-21 transcription underlies the lower plasma levels of the cytokine in eCs patients. To confirm these results, we evaluated IL-21 intracellular expression in our eCs-mimicking in-vitro model (PBMC from HC incubated with glucocorticoids), demonstrating a marked reduction in this cytokine too (Figure 4C). We then explored the mechanism by which IL-21 is regulated in a high glucocorticoid exposure condition. We first analyzed the IL-21 gene structure in silico and found three canonical glucocorticoid responsive elements (GRE) in the cytokine promoter region, suggesting a direct regulation of IL-21 by glucocorticoids (Figure S14). Moreover, IL-21 gene transcription and expression is known to be up-regulated by the NF-κB family transcription factor c-Rel30, and glucocorticoids are potent inhibitors of NF-κB activation through induction of IκBα synthesis31, 32. Interestingly, the IκBα promoter itself also contains GRE that presumably mediate its gene expression by binding to GR33. In this regard, we assessed the kinetics of IκBα levels following phorbol-myristate-acetate (PMA)/Ionomycin (Iono) stimulation in eCs and Post patients, as well as in HC. Stimulated PBMC from HC, eCs and Post patients showed a similar time course of IκBα levels with a nadir at 30 min and a rebound peak expression at 60 min. However, the baseline levels of IκBα, as well as the difference between nadir and peak and the IκBα peak level at 60 min. were significantly increased in eCs when compared to HC and Post patients (Figure 4D and E). To explore the relation between NF-κB signaling and IL-21 production, we tested IL-21 mRNA and protein levels in PBMC from HC and a patient with a known, disease-causing hemizygous IKBKG/NEMO mutation (IKBKG, c.−16+1G>C) leading to reduced NF-κB signaling. While HC cells elicited a strong IL-21 mRNA and protein production response following PMA/Iono stimulation, this effect was virtually abrogated after glucocorticoid incubation and mimicked the null response observed in PBMC carrying an IKBKB/NEMO mutation impairing NF-κB signaling (Figure 4F and G; of note, IKBKB/NEMO cells showed normal proliferative responses to TcR stimulation with anti-CD3+anti-CD28, data not shown).
Figure 4.

IL-21 regulation in eCs and Post patients, and NF-κB pathway evaluation
A-B. IL-21 in plasma (n=8) (A) and IL-21 mRNA (n=3) (B) was detected by qRT-PCR and ELISA in eCs and Post patients. C. Healthy donors’ PBMC was incubated without (left) or with (right) dexamethasone (1μg/mL) for 3 hours after PMA/ionomycin/brefeldin A stimulation for 5 hours, and measured IL-21 intracellular staining (n=4). D. IκBα degradation was performed at 0, 10, 30 and 60 min after PMA/ionomycin stimulation. E. The bar graph shows the MFI of IκBα on CD3+ T cells in eCs, Post and HC (n=3). F-G. IL-21 mRNA (F) and IL-21 in the supernatant (G) was detected by qRT-PCR and ELISA in PBMC from 2 HC and 1 NEMO patients stimulated with PMA/ionomycin in the absence or presence of dexamethasone (1μg/mL). (H) IL-21 effect on NF-κB pathway was evaluated by p65 phosphorylation on PBMCs from eCs and Post patients. Representative (left) and aggregated data (right) are shown. IL-21 did not increase p65 phosphorylation in the absence or presence of TNF-α on eCs or Post patients’ cells. Quantified values for p65 phosphorylation (p-p65) were normalized to total p65 expression and shown as fold changes compared to each untreated (0 minute) samples. Data are means ± SD (n = 3 independent experiments). Vinculin was used as a loading control. Statistical analysis for A and B: one-way ANOVA correcting for multiple comparison using the Tukey method; for E, F and G: two-way ANOVA correcting for multiple comparisons using the Sidak method, mean ± SD. * P < 0.05; ** P < 0.01; *** P < 0.001; **** P < 0.0001.
As IL-21 has been reported to sustain inflammatory signals34, we tested it effects on canonical NF-κB signaling of eCs and Post patients’ cells by evaluating p65 phosphorylation in response to IL-21 and TNF-α. As seen in Figure 4H, there was no evidence of canonical NF-κB signaling by IL-21 alone or any potentiation of the effect of TNF-α in any of the conditions tested. Taken altogether, these data suggest that LTHD glucocorticoid exposure reduces the transcription and translation of IL-21 possibly by directly regulating its promoter, but also in a NF-κB canonical pathway signaling-dependent manner by increasing IκBα baseline and rebound levels. Importantly, despite the low IL-21 transcripts and protein levels, IL-21R expression is sustained and responsiveness to this cytokine remained intact upon extrinsic IL-21 stimulation in eCs patient cells. Moreover, addition of IL-21 to eCs or Post patients’ cells does not seem to increase NF-κB-dependent inflammation or sustain NF-κB activation through other agonists (i.e., TNF-α), arguing against a potential deleterious consequence of IL-21 use in a glucocorticoid-environment.
Transcriptomic effect of LTHD glucocorticoid exposure in lymphocytes
To further evaluate the global transcriptional impact of glucocorticoid on CD4+ naïve T cells (the lymphocyte subset most affected by LTHD glucocorticoid exposure), we performed RNAseq analysis of these cells (>90% enriched from PBMC) at their baseline state in eCs and Post patients, as well as HC. Correlation analysis with hierarchical clustering revealed significantly differentially expressed transcripts between naïve CD4+ cells from eCs patients when compared with either HC or Post patient cells. No differences were detected when naïve CD4+ T cells from HC and Post patients were compared (Figure 5A). When the analysis was stratified on immune-related genes, FOS and FOSL2 were among the top differentially transcribed (reduced) in eCs vs. Post patients (Figure 5B, Table S3). We also performed Ingenuity Pathway Analysis (IPA) of the differentially expressed (DE) genes (eCs vs. Post and HC) and built a custom pathway by combining information from the Ingenuity Pathways Knowledge Base (IPKB) and our in-house experimental data (Figure S15). This analysis revealed glucocorticoid-induced downregulation of genes encoding Ap1 complex proteins (FOS, FOSL2, FOSB, ATF3), as well as downstream pro-inflammatory cytokines (IFNG, IL1B) and cytokine receptor (IFNGR1), with concomitant downregulation of PI3K (IRS1, IRS2, GAB2, FOS) and NF-κB (REL, BCL3, BCL6) signaling. Although a single transcript of BCL2 was targeted and covered by the RNAseq experiment, it was not determined to be differentially expressed. Nonetheless, the lower transcription of BCL6 and BCL3, whose antiapoptotic gene products affect BCL2 expression, was consistent with the lower BCL2 protein expression and increased apoptosis that we observed in separate experiments. The under-expression of IRS1 and IRS2, whose gene products bind BCL2, also correlated with the lower BCL2 protein expression observed separately. The PELI1 under-expression was consistent with the BCL6 under-expression and is another indicator of downregulated NF-kB activation. As noted above, FOS and FOSL2 were among the top DE genes (decreased) in eCs vs. Post patients (Figure 5B, Table S3). The FOS gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2, encoding leucine zipper proteins that dimerize with proteins of the JUN family, forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation35. While PI3 Kinase (PI3K) induces c-FOS transcription36, IL-21 promotes T cell survival through the PI3K pathway37.
Figure 5.

RNAseq from naïve CD4+ T cells from eCs and Post patients
A. Pearson correlation analysis of the variance stabilized RNASeq counts matrix for all differentially expressed genes (eCs vs. Post); Individuals in the eCs group (n=4) clustered together. Individuals in the Post patient group (n=3) clustered with the healthy controls (n=4) showing that there is a “normalizing” treatment effect on the targeted transcriptome. B. Volcano plot of differentially expressed immune-related genes (eCs vs. Post); NS=not significant; FC=fold change (maximum likelihood estimation); P=Wald test adjusted p-value.
We next evaluated phosphorylated S6 (pS6, downstream the PI3K/AKT/mTOR signaling pathway) in TcR stimulated CD4+ and CD8+ T cells followed by re-stimulation with cytokines (i.e., IL-2, IFNα and IL-21) in our eCs-mimicking in-vitro model (Figure 6A and S16). While TcR-stimulation strongly upregulated pS6 in the presence or absence of cytokines, glucocorticoids markedly decreased this. However, when cytokines were added to the system, IL-21 showed the strongest upregulation of pS6 with a ~50% higher induction of phosphorylation when compared to all the other cytokines tested. To evaluate the role of the PI3K pathway in the IL-21-dependent apoptosis modulating effect under glucocorticoid exposure, we added LY294002, a PI3K-specific inhibitor, in our eCs-mimicking condition (Figures 6B and C, S17, and S18). 10uM LY294002 effectively and almost completely inhibited S6 phosphorylation in T cell blasts upon TcR stimulation (Figure S17). As previously shown, IL-21 was able to rescue T cell apoptosis under glucocorticoid stimulation, but this effect was eliminated with PI3K inhibition (and apoptosis was further enhanced); the more limited apoptosis rescuing effects of IL-2 or IFNα were not affected by PI3K inhibition Figures 6B and S18). Interestingly, LY294002 by itself was able to induce apoptosis to similar levels as glucocorticoid, but neither additive or synergistic effects were evidenced when LY294002+glucocorticoid were used together in the presence of cytokines other than IL-21 (Figures 6B and S18A). As previously determined, IL-21 was also able to upregulate BCL2 expression to a greater extent than the other cytokines, but this effect was also abrogated by PI3K inhibition (Figures 6C and S18B). Together, these experiments demonstrate that LTHD glucocorticoids in eCs patients not only affect naïve CD4 T cells quantitively (as concluded from previous experiments) but also functionally at their transcriptomic profile (as determined by the RNAseq results), but these effects were no longer observed 6–13 months post successful surgical therapy. The PI3K pathway was particularly affected by the lower transcription of FOS and FOSL2 in LTHD glucocorticoid-exposed eCs patients. Although the contribution of other parallel pathways cannot be formally excluded, signaling through the PI3K pathway was both central and specific to the IL-21-dependent apoptosis rescue, as blocking this pathway decreased the expression of the antiapoptotic molecule BCL2, markedly increasing the level of apoptosis.
Figure 6.

PI3K pathway evaluation in eCs-mimicking conditions
A. pS6 (pS240) was assessed in blasted healthy control CD4+ T cells upon anti-CD3+ProteinA stimulation with or without dexamethasone incubation (n=5). The histogram (representative data, left) and bar graph (aggregated data of n=5, right) show phosphorylated S6 (pS6) under dexamethasone incubation with IL-2, IFNα or IL-21. B. PI3K inhibitor (LY294002: 10μM) was added 1 hour prior to dexamethasone incubation with cytokines (IL-2, IFNα or IL-21) and apoptosis was measured by Annexin V staining (n=5). C. Intracellular BCL2 expression was detected with LY294002 + dexamethasone in cytokines treatment (n=5; vehicle (DMSO) was added to the negative control (−) condition); the bar graph shows the statistical analysis: two-way ANOVA correcting for multiple comparisons using the Sidak method, mean ± SD. ** P < 0.01
Discussion
Endogenous Cushing syndrome in children is a rare disorder most frequently caused by pituitary tumors38. This rare condition is also a natural model in which to evaluate the bona fide effects of glucocorticoids on immunity, among other systems. While the effects of gonadal or non-glucocorticoid adrenocortical steroids on the immune system cannot be completely ruled out, they are likely minor or neglectable in the conditions studied. In the course of pediatric eCs, patients have the hormonal changes associated with puberty arrested and for about a year following successful surgery. Moreover, mineralocorticoids are typically suppressed because the elevated circulating cortisol binds to the mineralocorticoid receptor as well39–41. On the other hand, the study of healthy controls following single doses of glucocorticoids, although interesting, does not reflect the situation of common medical practice involving protracted glucocorticoid administration42. In our study we not only found T cell lymphopenia associated with eCs and LTHD glucocorticoid treatment/exposure consistent with previously reports, but here we have markedly expanded what is known in this setting by establishing reduced thymic output, decreased lymphocyte proliferation, and increased apoptosis as critical regulators of glucocorticoid-induced lymphopenia. We also identified and mechanistically defined the roles of several cytokines that affect glucocorticoid-mediated apoptosis. IL-21 had a distinctive effect on glucocorticoid-exposed T cells by preventing apoptosis and restoring more normal T-cell homeostasis. This effect was specific, as IL-21 did not modulate the apoptotic effects of anti-Fas or staurosporine on T cells. Through our work we showed that IL-21 acts by augmenting expression of BCL2 and thereby promoting cellular survival and diminishing apoptosis in a PI3K-dependent manner43, 44. In fact, blocking PI3K signaling using a specific inhibitor, or testing cells from a patient with IL-21 receptor deficiency, prevented BCL2 upregulateion following glucocorticoid+IL-21 stimulation, that was associated with persistence of increased T-cell apoptosis (glucocorticoid effects on T cells summarized in Figure S19).
When IL-21 mRNA and protein levels were analyzed, both were significantly reduced in eCs patients but restored 6–13 months postoperatively, while other cytokines examined were not affected.
Glucocorticoids negatively regulate the NF-κB canonical pathway by means of increased IκBα levels, which seems to play a central role in IL-21 regulation. Normally following stimulation, IκBα is phosphorylated, ubiquitinated, and degraded in the cytosol, allowing the NF-κB transcription factors c-Rel/p65 and p50 to be translocated to the nucleus to initiate transcription of NF-κB-regulated genes. The markedly increased IκBα levels detected in LTHD glucocorticoid-exposed eCs patient cells both at baseline and 60 minutes following stimulation prevented this response, thereby diminishing IL-21 transcription and translation. This effect was replicated using cells from a patient with an IKBKG/NEMO defect, which prevented c-Rel/p65 and p50 nuclear translocation and was associated with virtually absent IL-21 mRNA and protein levels. These results were also confirmed using HC PBMC that were incubated in-vitro with glucocorticoids.
Glucocorticoids can regulate the expression of particular genes by direct GRE binding, or indirectly via tethering to other proteins such as the AP-1 family of transcription factors45. Both the presence of GRE (Fig. S14) and preferential utilization of AP-1/JUN46 have been documented for the IL-21, strongly supporting the glucocorticoid-mediated IL-21 regulation hypothesis we propose.
For our eCs mimicking in-vitro model we used HC PBMC incubated overnight with dexamethasone 1μg/mL. While this model was carefully selected, it does not exactly technically mimic the long-term aspect of LTHD glucocorticoid exposure in eCs patients who are glucocorticoid exposed for weeks/months prior to their surgical treatment. On the other hand, this in-vitro model does reproduce the glucocorticoid-dependent effects on T cells from eCs patients, particularly when evaluating apoptosis and IL-21 modulation. Besides, we also demonstrated that these effects are glucocorticoid-dependent but not dexamethasone-specific as similar results were obtained when prednisolone, a more commonly used glucocorticoid clinically, was tested.
These data provide novel insights and possible therapeutic options to explore in LTHD glucocorticoid-treated lymphopenic individuals affected with severe opportunistic infections. IL-2 and IL-7 have been used in cancer immunotherapy, as well as some immune deficient states47, 48. Recombinant human (rh) IL-21 has been both well tolerated and exhibits antitumor effects in metastatic melanoma and renal cancers49. Primarily produced by Tfh and Th17 T cells, and to a lesser extent by NKT cells, IL-21 is well known to elicit pleiotropic responses that affect the differentiation and function of lymphoid and myeloid cells50. Of note, the effects of IL-21 observed in therapeutic models to date seem to differ from those induced by IL-21 when in a glucocorticoid-rich environment, as described both in mouse models and herein51–54. In preclinical studies conducted on non-human primates (Cynomolgus Macaques), rhIL-21 generated a dose-dependent thymic involution but did not result in changes in the total number of circulating T-lymphocytes, T-helper lymphocytes, or T-cytotoxic/suppressor lymphocytes55. In cancer patients, peripheral blood lymphocyte counts were reduced to less than half of baseline during rhIL-21 treatment, followed by a strong rebound after completion of cytokine treatment, likely caused by T cell activation/migration/redistribution49. These data suggest that glucocorticoid sufficiently alters thymocytes and T cells in such a way that addition of IL-21 causes distinctive functional effects under these different circumstances.
In summary, our dissection of the immunophenotype and mechanisms for T cell lymphopenia in pediatric patients with eCs before and 6–13 months after surgical cure of their disease has identified the bona fide effects of LTHD glucocorticoid on the immune system and its function, that is directed primarily on T cells. Our testing model of an in-vitro system to assay therapeutic alternatives (e.g., rhIL-21) allows us to develop and test agents to diminish the lymphopenia and lymphoid dysfunction that threaten so many.
Supplementary Material
Clinical Implications:
IL-21 was identified as a key mediator in glucocorticoid-induced T-cell apoptosis via BCL2 expression, suggesting IL-21 use in clinical settings may provide benefit controlling lymphopenia and its associated consequences.
Acknowledgments
We thank the patients and their families for their contributions to the study. SJH and SDR designed the experiments and analyzed the data; SJH, HSK, JEN, JS, and YS performed experiments; CT, ML and CAS identified the patients and provided and analyzed clinical information; MW, GU, RS, WJL, SMH, TAF and CAS analyzed data and participated in the writing of the manuscript; SJH and SDR wrote the manuscript, interpreted data and supervised the research. The content of this article does not necessarily reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. government.
Funding:
This work was supported by the Intramural Research Program, NIH Clinical Center, US National Institutes of Health (NIH) and the Division of Intramural Research, National Heart, Lung, and Blood Institute, NIH.
Abbreviations:
- ACTH
corticotropin
- BCL
B-cell lymphoma
- eCs
endogenous Cushing syndrome
- GRE
glucocorticoid responsive elements
- HC
healthy controls
- iBCL
inhibitor of BCL
- IFN
interferon
- IL
interleukin
- IL21R or IL-21R
IL-21 receptor
- Iono
Ionomycin
- IPKB
Ingenuity Pathways Knowledge Base
- LTHD
long-term high-dose
- NF-κB
nuclear factor-kappa B
- PBMC
peripheral blood mononuclear cells
- PI3K
phosphatidylinositol 3- kinase
- PMA
phorbol-myristate-acetate
- PMN
polymorphonuclear leukocytes
- pS6
phosphorylated S6
- RTE
recent thymic emigrants
- TcR
T cell receptor
- Tfh
T follicular helper
- TNF
tumor necrosis factor
- WBC
white blood cells
Footnotes
Publisher's Disclaimer: This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.
Conflict of Interest: W.J.L. and R.S. are inventors on NIH patents related to IL-21. The authors declare no competing financial interests.
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