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. 2021 Dec 7;6(6):e00720-21. doi: 10.1128/mSystems.00720-21

TABLE 2.

Simulation parameters

Description Symbol Value (reference[s])
Agent length L 6 μm (10, 65)
Agent width W 0.5 μm (10, 65)
Agent mass m 1.2 × 10−15 kg
No. of nodes per agent N 7
Linear spring constant kl Managed by Box2D (59)
Angular spring constant kb 10 pN · μm/rad (6567)
Total propulsive force per agent FT 55 pN (28)
Drag coefficient c 22 pN · min/μm
Substrate adhesion spring constant ka 100 pN/μm (28)
Substrate adhesion break distance da,max 0.5 μm (28)
Reversal period τr 8 min (6)
Direction change period τt 5 min
Simulation region dimension Lsim 200 μm
Agent density η 0.074 cells/μm2
Time step dt 0.0067 min
Adhesion force factor kadh 0.01 for WT; 0.1 for OE
End-end suppression factor δRe 1
Lateral suppression factor δRl 0.04
Minimum time for suppression activation τthr 5 min
Maximal adhesion length dthr 1.5 μm for end-end adhesion; 0.9 μm for lateral adhesion