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. 2021 Dec 9;10(12):giab079. doi: 10.1093/gigascience/giab079

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© The Author(s) 2021. Published by Oxford University Press GigaScience.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 5. — Correlation between the number of ONT bases generated per isolate and genome accuracy statistics for Flye assemblies (green), Medaka-polished assemblies (red), and Unicycler assemblies (blue). (A) Number of SNPs per 100 kb (log₁₀ scale) computed considering as reference short-read contigs generated by an independent assembler. (B) Number of indels per 100 kb (log₁₀ scale) computed considering as reference short-read contigs generated by an independent assembler. (C) Number of early terminated ORFs based on the ideel test. (D) Completeness of the assemblies as a percentage of complete single-copy conserved BUSCO genes (n = 440).