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. 2021 Dec 20;25(1):103672. doi: 10.1016/j.isci.2021.103672
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

Plasma samples from COVID-19 hospitalised patients (cohort 1) Manchester hospitals under the framework of the Manchester Allergy, Respiratory and Thoracic Surgery (ManARTS) and the Northern Care Alliance Research Collection (NCARC) ManARTS Biobank (study no M2020-88, ethics: 15/NW/0409);
NCARC tissue biobank (study no. NCA-009; ethics 18/WA/0368).
Leftover hospital blood samples from hospitalised COVID-19 patients (cohort 2) York District Hospital, York and Scarborough NHS Trust REC reference 19/YH/0394 with approved SA002 amendment of IRAS project 269597

Critical commercial assays

LEGENDplex™ HU Th Cytokine Panel (12-plex) w/ VbP V02 BioLegend Cat #741028
LEGENDplex Human Proinflammatory chemokine Panel 1 BioLegend Cat #741081
LEGENDplex Human CCL5 1-plex BioLegend Cat #741083
GM-CSF ABTS ELISA kit Peprotech
Norgen Plasma/Serum RNA Purification Mini kit Norgen Cat #55000
miRNA Taqman assays Thermo Fischer Cat #4427975
Taqman MicroRNA Reverse Transcription Kit Thermo Fischer Cat #4366596
Taqman Universal PCR Master Mix Thermo Fischer Cat #4305719
Nanostring human v3 miRNA for 827 human miRNAs Nanostring CSO-MIR3-12

Deposited data

Nanostring miRNA data GEO GSE189610

Software and algorithms

R statistical programming language The R project https://r-project.org
Prism GraphPad https://graphpad.com

Other

StepOnePlus Real Time PCR System Thermofisher Cat #4376600
nCounter® FLEX Analysis System – nCounter Prepstation Nanostring Inc NA
nCounter® FLEX Analysis System – nCounter Digital Analyser Nanostring Inc NA