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. 2021 Dec 6:dqab017. doi: 10.1093/imammb/dqab017

Modelling the spreading of the SARS-CoV-2 in presence of the lockdown and quarantine measures by a kinetic-type reactions approach

Giorgio Sonnino 1,✉, Philippe Peeters 1, Pasquale Nardone 1
PMCID: PMC8689708  PMID: 34875047

Abstract

We propose a realistic model for the evolution of the COVID-19 pandemic subject to the lockdown and quarantine measures, which takes into account the timedelay for recovery or death processes. The dynamic equations for the entire process are derived by adopting a kinetic-type reactions approach. More specifically, the lockdown and the quarantine measures are modelled by some kind of inhibitor reactions where susceptible and infected individuals can be trapped into inactive states. The dynamics for the recovered people is obtained by accounting people who are only traced back to hospitalized infected people. To get the evolution equation we take inspiration from the Michaelis Menten’s enzyme-substrate reaction model (the so-called MM reaction) where the enzyme is associated to the available hospital beds, the substrate to the infected people, and the product to the recovered people, respectively. In other words, everything happens as if the hospitals beds act as a catalyzer in the hospital recovery process. Of course, in our case, the reverse MM reaction has no sense in our case and, consequently, the kinetic constant is equal to zero. Finally, the ordinary differential equations (ODEs) for people tested positive to COVID-19 is simply modelled by the following kinetic scheme Inline graphic with Inline graphic or Inline graphic, with Inline graphic, Inline graphic, Inline graphic and Inline graphic denoting the compartments susceptible, infected, recovered and deceased people, respectively. The resulting kinetic-type equations provide the ODEs, for elementary reaction steps, describing the number of the infected people, the total number of the recovered people previously hospitalized, subject to the lockdown and the quarantine measure and the total number of deaths. The model foresees also the second wave of infection by coronavirus. The tests carried out on real data for Belgium, France and Germany confirmed the correctness of our model.

Keywords: mathematical model, COVID-19, dynamics of population

1. Introduction

Coronavirus disease 2019 (COVID-19) is caused by a new coronavirus (SARS-CoV-2) that has spread rapidly around the world. Most infected people have no symptoms or suffer from mild, flu-like symptoms, but some become seriously ill and can die. In recent weeks coronavirus has had too many opportunities to spread again. After successfully tamping down the first surge of infection and death, Europe is now in the middle of a second coronavirus wave as it moves into winter (Cacciapaglia et al., 2020; Bailey, 1975; Sonia & Nunn, 2006; Vynnycky & White, 2010; Gleick, 1987). Even though several vaccines for COVID-19 are actually been produced other ways of slowing its spread have to continue to be explored. One way of controlling the disease is the lockdown and the quarantine measures. The lockdown measures are emergency measures or conditions imposed by governmental authorities, as during the outbreak of an epidemic disease, that intervene in situations where the risk of transmitting the virus is greatest. Under these measures, people are required to stay in their homes and to limit travel movements and opportunities for individuals to come into contact with each other such as dining out or attending large gatherings. The lockdown measures are more effective when combined with other measures such as the quarantine. Quarantine means separating healthy people from other healthy people, who may have the virus after being in close contact with an infected person, or because they have returned from an area with high infection rates. Similar recommendations include isolation (like quarantine, but for people who tested positive for COVID-19) and physical distancing (people without symptoms keep a distance from each other). Several governments have then decided that stricter lockdown and quarantine measures are needed to bring down the number of infections. In this work we shall propose interventions that are as targeted as possible. Unfortunately, the greater the number of infections, the more sweeping the measures have to be. Tightening the measures will have an impact on our society and the economy but this step is needed for getting the coronavirus under control.

Several models have been developed to describe the pandemic dynamics, which are based on the classic compartmental epidemiological models (Coullet, 2020; Brauer & Castillo-Chavez, 2012) and adapting them to the specific case of COVID-19. Epidemiological models, describing disease transmission within a population, provide important insights to understand which control mechanisms can lead, under what circumstances, to remove, or at least reduce, the infection. In the case COVID-19 it is necessary to consider particularly detailed models to accurately predict the dynamics of the epidemic (Nowzari et al., 2016b). One commonly used model is the SIR model (Kermack & Mc Kendrick, 1927) for human-to-human transmission, which describes the flow of individuals through three mutually exclusive stages of infection: susceptible, infected and recovered. Putra and Khozin Mu’tamar (Putra & Khozin, 2019) used the particle swarm optimization algorithm to estimate parameters in the SIR model. The results indicate that the suggested method is precise and has low enough error compared to other analytical methods. Mbuvha and Marwala (Mbuvha & Marwala, 2020) calibrated the SIR model to South Africa’s reported cases after considering different scenarios of the reproduction number (Inline graphic) for reporting infections and healthcare resource estimations. Qi et al. (Qi et al., 2020) proposed that both daily temperature and relative humidity can influence the occurrence of COVID-19 in Hubei and other provinces. Salgotra and Gandomi (Salgotra et al., 2020) developed two COVID-19 prediction models based on genetic programming and applied these models in India. They found that genetic evolutionary programming models have proven to be highly reliable for COVID-19 cases in India. Other models may accurately portray the dynamic spread of specific epidemics. For the COVID-19 pandemic, several models have been developed. Lin and colleagues extended a SEIR (susceptible, exposed, infectious, removed) model considering risk perception and the cumulative number of cases (Lin et al., 2020), Anastassopoulou and colleagues proposed a discrete-time SIR model including dead individuals (Anastassopoulou et al., 2020b), Casella developed a control-oriented SIR model that stresses the effects of delays and compares the outcomes of different containment policies (Casella, 2021) and Wu and colleagues (Wu et al., 2020) used transmission dynamics to estimate the clinical severity of COVID-19. A SUQC model (that is, with susceptible, un-quarantined infected, quarantined infected and confirmed infected classes) is proposed in Zhao and Chen (Zhao & Chen, 2020) to describe the COVID-19 dynamics in China and analyse the effects of some control measures. Also, some researchers (Al-qaness et al., 2020) and (Singh et al., 2020) preferred to use hybrid algorithms to enhance the power of forecasting algorithms. Naudé (Naudé, 2020) and Rahimi et al. (Rahimi et al., 2021) provided a review and brief analysis of the most important machine learning forecasting models against COVID-19. Auto regressive integrated moving average (ARIMA) method is also used to forecast short-term confirmed cases of COVID-19. Ahmar and del Val used the SutteARIMA method to predict cases of COVID-19 and Spain Market Index (IBEX 35) (Ahmar & Del Val, 2020). Chakraborty and Ghosh (Chakraborty & Ghosh, 2020) presented a real-time forecast of confirmed COVID-19 cases for multiple countries as well as a risk assessment of the novel COVID-19 for some profoundly affected countries using the regression tree algorithm. A simple moving average approach was used by Chaudhry et al. (2020) to predict COVID-19 confirmed cases in Pakistan. Chen et al. (2020) used a five-parameter logistic growth model to reconstruct and forecast the COVID-19 epidemic in the USA; however, the authors claimed the accuracy of their model depends on federal- and state-level policy decisions. Zhao et al. (Zhao et al., 2020) introduced a platform, icumonitoring.ch, to provide hospital-level projections for intensive care unit (ICU) occupancy based on SEIR models. The proposed platform could help ICU managers to estimate the need for additional resources and is updated every 3–4 days. Chimmula and Zhang (Chimmula & Zhang, 2020) applied long short-term memory networks as a deep learning technique for predicting COVID-19 outbreaks in Canada. Their approach identified the key features for estimating the trends of the pandemic in Canada. A simple ARIMA model was proposed by Chintalapudi et al. (2020) to estimate registered and recovered cases after a lockdown in Italy. A SIDARTHE model is proposed by Giordano and colleagues (Giordano et al., 2020) where the population is divided into eight classes: S (susceptible), I (infected), D (diagnosed, that is, detected asymptomatic infected); A (ailing, that is, undetected symptomatic infected), R (recognized, that is, detected symptomatic infected), T (threatened, that is, detected infected with life-threatening symptoms), H (healed, i.e., recovered) and E (extinct, i.e., dead). The final goal of the contribution in Giordano et al. (2020) is to estimate the impact of different actions to contain the contagion in Italy. To this aim, the authors evaluate different possible scenarios by suitably modifying some model parameters. Mahalle and Kalamkar (Mahalle et al., 2020) categorized forecasting models as mathematical models and machine learning techniques, using WHO and social media communications as datasets.

We have illustrated this long list of works in the field in order to highlight that, while facing the same problem, albeit with different methods, they are all united by a single ‘common thread’: the overall objective of these works is to obtain the dynamics describing realistic situations of the spread of SARS-CoV2 infection by means of macroscopic descriptions. It should immediately be said that we can consider this task as achieved if we are able to

  1. model the distribution of hospitals in a country;

  2. model the distribution of the poles of attraction of susceptible people (e.g., shopping centers, workplaces, etc.);

  3. identify a mechanism that allows to establish when a pole of attraction becomes saturated with infected people by proposing alternative poles of attraction;

  4. modelling the lockdown and the quarantine measures adopted by the government of the country;

  5. determine the nature of the intrinsic (ie spontaneous) fluctuations to which a macroscopic system is subjected, determining the correlation function by statistical mechanics.

To our knowledge, the current techniques mentioned above are unable to resolve the issues listed above. As evident from a comparison between the theoretical results and experimental data, although these models give a trend of the features exhibited by the time-series data, it hardly represents the actual trends. For instance, as the effect of latent time has not been considered, growth in active cases of infections, as predicted by the susceptible-infectious-recovered-deceased model (SIRD model), remains very steep. Further, as quarantine effects have not been considered, the decay predicted by the SIRD model is much slower than reality. The predicted value of total number of deaths is also much higher than actual. Hence, this model needs proper modifications to corroborate all the three data sets—infected, recovered and dead—simultaneously. Lockdown and quarantine measures and the role of the time delay play a significant role in the way the infection spreads over time. Hence, we need to incorporate these factors into the model. When several factors are involved simultaneously in a process, how should we proceed then? A suggestion comes to us from how physicists approached the study of the science of Nonlinear Phenomena and Complex Systems:

  • Inline graphic

    First of all we must realize that it is unrealistic to think to be able to describe a complex phenomenon, only by using macroscopic models that, in addition, are over-simplified;

  • Inline graphic

    Secondly, we must accept the idea that it is not possible to take into consideration, with a single model, all the factors involved in a complex phenomenon;

  • Inline graphic

    As physicists currently do to study the dynamics of thermodynamic systems (i.e., macroscopic systems) far from equilibrium, the macroscopic model that describes the dynamics of the system must be derived from fundamental processes i.e., by a microscopic description and not directly by a macroscopic approach (as it is the case, for instance, for the SIRD model).

In this work we introduce a kinetic-type reactions (KTR) approach (Sonnino et al., 2020; Sonnino et al., 2021), calibrated on the COVID-19 outbreak data in Belgium, France and Germany. Here, by analogy, we are authorized to introduce the following microscopic postulates:

  1. The microscopic detailed balance principle is respected. The overall COVID-19 spreading process may be decomposed into elementary processes (contacts among individuals, or steps, or elementary reactions). It states that at equilibrium, each elementary process is in equilibrium with its reverse process. It should be noted that this principle has important repercussions at the macroscopic level such as, for example, the validity of the reciprocity relations of the coefficients that appear in the macroscopic model.

  2. The law of mass action is satisfied. The rate at which an elementary step proceeds is directly proportional to the product of the concentrations of the reactants (in our case the ‘populations’). It explains and predicts behaviours of populations in dynamic equilibrium. Specifically, it implies that for a system in equilibrium, the ratio between the ‘reacting’ populations density and the produced populations density is constant.

  3. Finally, the Th. De Donder principle is satisfied (Prigogine, 1947; Prigogine, 1954). The Th. De Donder principle establishes that a chemical reaction, however complex, can always be reduced to a finite series of elementary chemical steps. In this principle lies all the real potential power of the KTR approach. It is easily checked that several current models applied to a different data set violate the Th. De Donder principle.

It is worth remembering that, as can be easily understood, the three above axioms provide strict constraints to the coefficients appearing in the macroscopic model, which, contrarily to the models described in the works illustrated above, can no longer be chosen arbitrarily. We shall see that the KTR approach is very promising and allows to achieve this goal in a relatively simple way. Indeed, the KRT approach

  • Inline graphic

    models each actor by a dedicated ‘chemical species’ that can only be created or destroyed as the result of one, or several, elementary steps,

  • Inline graphic

    allows to determine the dynamics of the system starting from this set of elementary steps;

  • Inline graphic

    thanks to its flexibility, allows to analyse complex situations where several variables are involved, such as Inline graphic, Inline graphic, Inline graphic, Inline graphic, etc.

To the best of our knowledge, this approach, at fundamental level, has never been proposed in the literature. Concretely, as is customary in the study of complex phenomena, we face the problem of the spread of the SARS-CoV 2 virus by proceeding step-by-step. In this work we shall limit ourselves to analyse the dynamics of the infectious, recovered and deceased people by taking into account also the findings reported in Sonnino & Nardone (2020) and Sonnino (2020). The lockdown and quarantine measures imposed by governments to population as well as the role of the hospitals and health institutes are also herein modelled. In this framework, the dynamics of the health institutes is obtained by taking inspiration from the Michaelis–Menten’s enzyme-substrate reaction model (the so-called MM reaction; Michaelis & Menten, 1913; Srinivasan, 2020a; Srinivasan, 2020b) where the enzyme is associated to the available hospital beds, the substrate to the infected people and the product to the recovered people, respectively. In other words, everything happens as if the hospital beds act as a catalyser in the hospital recovery process (Sonnino et al., 2020). We shall see that the combined effect of the restrictions measures with the action of the health institutes is able to contain and even dampen the spread of the SARS-CoV-2 epidemic. In addition, the time delay for recovery or death processes are duly taken into account. More specifically, in our model, we have the following 11 compartments:

Inline graphic = Number of susceptible people. This number concerns individuals not yet infected with the disease at time Inline graphic, but they are susceptible to the disease of the population;

Inline graphic = Number of susceptible people subject to the lockdown measures;

Inline graphic = Number of hospitalized infected people;

Inline graphic = Number of people in quarantine. This number concerns individuals who may have the virus after being in close contact with an infected person;

Inline graphic = Number of people who have been infected and are able of spreading the disease to those in the susceptible category (in this compartment, Inline graphic and Inline graphic are not accounted);

Inline graphic = Cumulative recovered people previously hospitalized;

Inline graphic = Cumulative number of recovered people (by excluding people previously hospitalized) meaning specifically individuals having survived the disease and now immune. Those in this category are not able to be infected again or to transmit the infection to others;

Inline graphic = Cumulative number of people previously hospitalized dead for COVID-19;

Inline graphic = Cumulative number of dead people (by excluding the compartment Inline graphic), for COVID-19;

Inline graphic = Number of inhibitor sites mimicking lockdown measures:

Inline graphic = Number of inhibitor sites mimicking quarantine measures.

In addition, Inline graphic, defined in Eq. (18), denotes the number of total cases.

The manuscript is organized as follows. In Section 2 we derive the deterministic ordinary differential equations (ODEs) governing the dynamics of the infectious, recovered and deceased people. The lockdown and quarantine measures are modelled in Subsection 2.2. The dynamics of the hospitalized individuals (i.e., the infectious, recovered and deceased people) can be found in Subsection 2.4. As mentioned above, the corresponding ODEs are obtained by considering the MM reaction model. The equations governing the dynamics of the full process and the related basic reproduction number are reported in Section 3 and Section 4, respectively. It is worth mentioning that our model foresees also the second wave of infection by coronavirus. As shown in Section 5, in absence of the restrictive measures and by neglecting the role of the hospitals and the delay in the reactions steps, our model reduces to the classical SIRD model (Kermack & McKendrick, 1927). Finally, Section 6 shows the good agreement between the theoretical predictions with real data for Belgium, France and Germany. The last section, Section 7, presents the conclusions and perspectives of this manuscript.

2. Model for COVID-19 in the presence of the lockdown and quarantine measures

The population is assigned to compartments with labels Inline graphic, Inline graphic, Inline graphic, Inline graphic, etc. The dynamics of these compartments is generally governed by deterministic ODEs, even though stochastic differential equations should be used to describe more realistic situations (Sonnino et al., 2021). In this Section, we shall derive the deterministic ODEs obeyed by compartments. This task will be carried out by taking into account the theoretical results recently appeared in the literature (Sonnino, 2020; Sonnino et al., 2020) and without neglecting the delay in the reactions steps.

2.1 Modelling the susceptible people

If a susceptible person encounters an infected person, the susceptible person will be infected as well. So, the scheme simply reads

graphic file with name DmEquation1.gif (1)

2.2 Modelling the lockdown and quarantine measures

The lockdown measures are mainly based on the isolation of the susceptible people, (eventually with the removal of infected people by hospitalization), but above all on the removal of susceptible people.

It is assumed the lockdown and quarantine measures are modelled by some kind of inhibitor reaction where the susceptible people and the infected can be trapped into inactive states Inline graphic and Inline graphic, respectively. Indicating with Inline graphic and Inline graphic the inhibitor sites mimicking the lockdown and the quarantine measures respectively, we get

graphic file with name DmEquation2.gif (2)

In the scheme (2), symbol Inline graphic stands for a delayed reaction just like enzyme degradation processes for instance. Here, Inline graphic hence, if Inline graphic, an almost perfect lockdown measure would totally inhibit virus propagation by inhibiting all the susceptible people Inline graphic and the infected people Inline graphic. A not so perfect lockdown measure would leave a fraction of Inline graphic free to spread the virus. The number of inhibitor sites may be a fraction of the number of the infected people. Figure 1 shows the behaviour of the lockdown efficiency parameter adopted in our model. For simplicity, we have chosen a parameter that is constant Inline graphic inside the time interval Inline graphic and vanishes outside it. The inverse lockdown efficiency parameter is Inline graphic, which is equal to Inline graphic outside the door and vanishes inside the the interval Inline graphic.

Fig. 1.


Fig. 1.

Lockdown efficiency parameter. For simplicity, in our model, the lockdown efficiency parameter Inline graphic is a door-step function. This function is constant, Inline graphic, within the range Inline graphic and zero outside it.

Finally, from Schemes (1) and (2), we get the ODEs for Inline graphic, Inline graphic, Inline graphic and Inline graphic:

graphic file with name DmEquation3.gif (3)

with the dot above the variables denoting the time derivative.

2.3 ODE for the total recovered people

At the first approximation, the ODE for the total recovered people  Inline graphic (i.e. the total individuals having survived the disease) is trivially obtained by considering the following kinetic scheme:

graphic file with name DmEquation4.gif (4)

That is, the rate of Inline graphic is approximatively proportional to the number of the infected people Inline graphic at time Inline graphic i.e.1  

graphic file with name DmEquation5.gif (5)

where we have introduced the time-delay Inline graphic (the number of the recovered people at time time Inline graphic is proportional to the infected people at time Inline graphic). However, it is useful to clarify the following. In Eqs (4), Inline graphic stands for the total number of the recovered people (i.e. the number of the recovered people previously hospitalized, plus the number of the asymptomatic people, plus the infected people who have been recovered without being previously hospitalized). The natural question is: how can we count Inline graphic and compare this variable with the real data? The current statistics, produced by the ministries of health of various countries, concern the people released from the hospitals. Apart from Luxembourg (where the entire population has been subject to the COVID-19-test), no other countries are in a condition to provide statistics regarding the total people recovered by COVID-19. Hence, it is our opinion that the equation for Inline graphic is not useful since it is practically impossible to compare Inline graphic with the experimental data. We then proceed by adopting approximations and to establish the differential equation whose solution can realistically be subject to experimental verification. More specifically:

Firstly, we assume that Inline graphic is given by three contributions:

graphic file with name DmEquation6.gif (6)

with Inline graphic, Inline graphic and Inline graphic denoting the total number of the recovered people previously hospitalized, the total number of asymptomatic people and the total number of people immune to SARS-CoV-2, respectively.

Secondly, we assume that the two contributions Inline graphic and Inline graphic are negligible i.e. we set Inline graphic and Inline graphic.2

2.4 ODE for the recovered people in the hospitals

Now, let us determine the dynamics for the recovered people in the hospitals. So, we account people who are only traced back to hospitalized infected people. We propose the following model:

graphic file with name DmEquation7.gif (7)

with Inline graphic denoting the number of available hospital beds, Inline graphic the number of infected people, Inline graphic the number of infected people blocking an hospital bed, Inline graphic the number of recovered people previously hospitalized and Inline graphic the number of people deceased in the hospital. Of course,

graphic file with name DmEquation8.gif (8)

The dynamic equations for the processes are then:

graphic file with name DmEquation9.gif (9)

where Inline graphic and Inline graphic are the average recovery time delay and the average death time delay, respectively, and we have taken into account Eq. (8) i.e., Inline graphic. In general Inline graphic. Of course, the variation of Inline graphic over a period Inline graphic is:

graphic file with name DmEquation10.gif (10)

2.5 ODE for people tested positive to COVID-19

The number of the infected people may be modelled by the following kinetic scheme  

graphic file with name DmEquation11.gif (11)

The scheme (11) stems from the following considerations

  1. a) If a susceptible person encounters an infected person, the susceptible person will be infected;

  2. b) The infected people can either survive and, therefore, be recovered after an average time-delay Inline graphic, or die after an average time-delay Inline graphic;

  3. c) The schemes (2) and (7), respectively, have been taken into account.

The differential equation for the infected people is reads then

graphic file with name DmEquation12.gif (12)

2.6 ODE for deaths

In this model, we assume that the rate of death is proportional to the infected people, according to the scheme (11). By also taking into account the scheme (2), we get

graphic file with name DmEquation13.gif (13)

and the corresponding ODE for deaths reads

graphic file with name DmEquation14.gif (14)

3. Set of ODEs for the spread of SARS-CoV-2 when the lockdown and the quarantine measures are adopted

By collecting the above ODEs, we get the full system of differential equations governing the dynamics of the number of the infected people, the total number of the recovered people previously hospitalized and the total number of deceased peopled, when the lockdown and the quarantine measures are adopted

graphic file with name DmEquation15.gif (15)

From Eqs (15) we get

graphic file with name DmEquation16.gif (16)

or, by taking into account that Inline graphic, Inline graphic, Inline graphic and Inline graphic we get

graphic file with name DmEquation17.gif (17)

The number of total cases Inline graphic is defined as

graphic file with name DmEquation18.gif (18)

4. The basic reproduction number

We note that, in absence of the lockdown and the quarantine measures, the dynamics of the infectious class depends on the following ratio:

graphic file with name DmEquation19.gif (19)

with Inline graphic denoting the total population. Inline graphic is the basic reproduction number. This parameter provides the expected number of new infections from a single infection in a population by assuming that all subjects are susceptible (Bailey, 1975; Sonia & Nunn, 2006). The epidemic only starts if Inline graphic is greater than Inline graphic, otherwise the spread of the disease stops right from the start.

5. Comparison with the SIRD model

The SIRD model is one of the simplest compartmental models, and many models may be derived from this basic form. According to the SIRD model, the dynamic equations governing the above compartments read (Kermack & McKendrick, 1927)

graphic file with name DmEquation20.gif (20)

It is easily checked that Eqs (15) reduce to Eqs (20) by adopting some assumptions. In particular:

1) The system is not subject to the lockdown and quarantine measures;

2) The average time delay may be neglected;

3) Hospitals do not enter in the dynamics.

Under these assumptions, Eqs (15) reduce to the SIRD equations:

graphic file with name DmEquation21.gif (21)

6. Application of the model and appearance of the second wave of SARS-CoV-2 infection

Let us now apply our model to the case of a small country, Belgium, and to other two big countries, France and Germany. Real data are provided by the various National Health agencies (Belgium—Sciensano, Sciensano, 2021A; France—Santé Publique France, France, 2021B; Germany—Robert Koch Institut. Country data from Worldbank.org, Koch Institute, 2021C) and compiled, among others, by the European Centre for Disease Prevention and Control (ECDC). It should be noted that this measures do not generally provide the true new cases rate but reflect the overall trend since most of the infected will not be tested (Our World in Data, 2021D). It should also be specified that real data provided by ECDC refer to the new cases per day, which we denote by Inline graphic. By definition, Inline graphic corresponds to the new infected people generated from step Inline graphic solely during 1 day, and not to the compartment Inline graphic. Hence, the ECDC data have to be confronted vs the theoretical predictions provided by the solutions for Inline graphic and Inline graphic of our model, according to the relation Inline graphic. The values of the parameters used to perform these comparisons are shown in Table 1.

Table 1.

List of the parameters

Parameters Belgium France Germany
Density [Inline graphic] 377 119 240
Surface [Inline graphic] 30530 547557 348560
Inline graphic [Inline graphic] 0.00072 0.002 0.00093
Inline graphic after Inline graphic 0.000288 0.00087 0.000387
Inline graphic [Inline graphic] 0.062 0.062 0.0608
Inline graphic [Inline graphic] 0.05 Inline graphic 0.05 Inline graphic 0.02 Inline graphic
Inline graphic [Inline graphic] 0.07 0.06 0.06
Inline graphic [Inline graphic] 0.02 0.01 0.01
Inline graphic [Inline graphic] 377.0 119 240
Inline graphic [Inline graphic] 0.01 0.01 0.01
Inline graphic [Inline graphic] 0.2 0.2 0.21
Inline graphic 0.5 0.5 0.1
Inline graphic [Inline graphic] 7 7 7
Inline graphic [Inline graphic] 7 7 7
Inline graphic [Inline graphic] 8 8 8
Inline graphic [Inline graphic] 8 8 8
Inline graphic [Inline graphic] 0.0655 0.0091 0.023
Inline graphic [Inline graphic] 0.0023 0.0018 0.0014
Start Inline graphic [Inline graphic] 77 71 76
End Inline graphic [Inline graphic] 124 131 125
Start Inline graphic [Inline graphic] 306 303 306

Initial Inline graphic and Inline graphic values have been estimated (fitted) from the measurements using the short period at the start of the pandemic using simple exponential solution valid during that period. Inline graphic is the initial value of infected from 1 March 2020 (day 60) obtained from the respective measurements. Hospital capacity is evaluated from the different countries’ published capacity. Lockdown starting dates and duration are retrieved from each country’s Covid policies (ECDC, 2021E). Other parameters have been estimated by best fit of new cases during the first wave. We draw attention to the fact that the constants Inline graphic, Inline graphic, Inline graphic, Inline graphic and Inline graphic have been normalized with respect to the surface of the country. As it can be seen, the values of the re-normalized constants are the same values, at least in terms of orders of magnitude, irrespective of the magnitude of the country in question (Belgium, France and Germany). However, we are aware that the interpretation may vary from one country to another. Finally, numerical solutions to the time delayed ODEs have been obtained by making use of the MATLAB dde23 module with a constant time delay. Discontinuities have been avoided for the historical values and a Runge–Kutta implicit scheme is used (Shampine & Thompson, 2001).

During the first lockdown, countries have taken various actions to limit coronavirus spreading (social distancing, wearing masks, reducing high density hotspots, etc.). In order to include these measures in a simple way, we assumed that the net effect is to reduce the actual infection kinetic rate Inline graphic by some constant factor. This is given in the table as Inline graphic after Inline graphic. Note that the transition occurs instantaneously in our model; this leads to the sharp drop in the total infected at that time shown in the figures. Other parameters are tuned to account for the actual variability of Inline graphic (but not its absolute value) and official number of deaths (Inline graphic). The delay for recovery and death processes has been estimated from the measurements of hospitalization recovery in a country. For instance, Fig. 2 shows the estimation of the recovery time-delay for Belgium: it corresponds to the time interval between the peak of the new admission and the peak of the recovered people from hospitals. A similar procedure has been adopted for estimating the recovery and death time-delays also for France and Germany.

Fig. 2.


Fig. 2.

Estimation of the time delay. The time delays have been estimated by considering the time interval between the peak of the new admission and the peak of the recovered people from hospitals. This figure corresponds to the Belgian case.

Inline graphic  Belgian case.

Figure (3) refer to the Belgian case. In particular, Fig. (3) shows the solutions of our model for the infectious (Inline graphic), total recovered (Inline graphic) and total deceased (Inline graphic) people. Figure (4) illustrates the theoretical solutions for hospitalized infectious (Inline graphic), the total recovered (Inline graphic) and total deceased (Inline graphic) people previously hospitalized.

Fig. 3.


Fig. 3.

Theoretical solutions for infectious (Inline graphic), cumulative number of recovered people (Inline graphic) and deaths (Inline graphic) for Belgium.

Fig. 4.


Fig. 4.

Theoretical solutions for hospitalized infectious (Inline graphic), total recovered (Inline graphic) and total deceased (Inline graphic) people, previously hospitalized, for Belgium.

Figures (5) and (6) show the comparison between the theoretical predictions for Inline graphic and deaths and real data for Belgium (according to the database Sciensano). Notice in Fig. 5 the prediction of the second wave of infection by SARS-CoV-2

Fig. 5.


Fig. 5.

Comparison between the theoretical prediction for Inline graphic with real data provided by the data base Sciensano, for Belgium.

Fig. 6.


Fig. 6.

Comparison between the theoretical solution of our model for deaths with real data provided by the database Sciensano, for Belgium.

Inline graphic  French case.

Figures (7) and (8) show the comparison between the theoretical predictions for Inline graphic and deaths and real data for Belgium (according to the database Santé Publique France). Notice in Fig. 7 the prediction of the second wave of infection by SARS-CoV-2

Fig. 7.


Fig. 7.

Comparison between the theoretical prediction for Inline graphic with real data provided by the data base Santé Publique France, for France.

Fig. 8.


Fig. 8.

Comparison between the theoretical solution of our model for deaths with real data provided by the database Santé Publique France, for France.

Inline graphic  German case.

Figures (9) and (10) show the comparison between the theoretical predictions for Inline graphic and deaths and real data for Belgium (according to the database (Robert Koch Institut). Country data from Worldbank.org). Notice in Fig. 9 the prediction of the second wave of infection by SARS-CoV-2.

Fig. 9.


Fig. 9.

Comparison between the theoretical prediction for Inline graphic with real data provided by the data base (Robert Koch Institut. Country data from Worldbank.org), for Germany.

Fig. 10.


Fig. 10.

Comparison between the theoretical solution of our model for deaths with real data provided by the database (Robert Koch Institut. Country data from Worldbank.org), for Germany.

7. Perspectives

It is worth noting the degree of the flexibility of our model. For example, let us suppose that we need to set up a model able to distinguish old population (over 65 year old) from the young one (with age not exceeding 35 years), by assuming that the older population is twice as likely to get infected by coronavirus with respect to the younger one. In this case, it is just sufficient to replace the scheme Inline graphic with the scheme

graphic file with name DmEquation22.gif (22)

with Inline graphic and Inline graphic denoting the susceptible young people and the susceptible old people, respectively. Another example could be the following. Let us suppose that we need to distinguish two class of infected individuals:

1) Infected people (denoted by Inline graphic) able to transmit the coronavirus to susceptible according to the (standard) scheme Inline graphic;

2) Infected people (denoted by Inline graphic) having the capacity to transmit the virus, say, seven times higher with respect to the category 1). In this case, the corresponding scheme reads:

graphic file with name DmEquation23.gif (23)

It is then easy to write the ODEs associated to schemes (22) and (23).

Let us now consider another aspect of the model. In Subsection (2.2), we have introduced scheme (2) that models the lockdown measures. As mentioned, such measures are imposed by national governments to all susceptible population. However, we can also take into consideration the hypothesis that these measures are not rigorously respected by the population and this for various reasons: neglect of the problem, depression due to prolonged isolation, lack of confidence in the measures adopted by the government, desire to attend parties with friends and relatives, refusal to wear masks in crowded environments, etc. These actions invalidate the effectiveness of lockdown measures significantly. Scheme (2) still adapts to describe these kind of situations with the trick of replacing Fig. 1 with another one that models the emotional behaviour of susceptible people (or with an analytic expression that may be obtained by using the mathematical basis introduced in Sonnino et al., 2021). The ODEs read

graphic file with name DmEquation24.gif (24)

where Inline graphic stands for emotional.

This paper, together with Sonnino et al. (2021), are the first contributions to the overall objectives aiming to obtain the correct space-time stochastic differential equations able to describe realistic situations of spread of SARS-CoV2 infection in large countries. This goal can only be achieved if we are able to

  1. model the distribution of hospitals in a country;

  2. model the distribution of the poles of attraction of susceptible people (e.g., shopping centers, workplaces, etc.);

  3. identify a mechanism that allows to establish when a pole of attraction becomes ‘saturated’ with infected people by proposing alternative poles of attraction;

  4. modelling the lockdown and the quarantine measures adopted by the government of the country;

  5. determine the nature of the intrinsic (ie spontaneous) fluctuations to which a macroscopic system is subjected, determining the correlation function by statistical mechanics.

At first glance, such a work program would appear to be too ambitious and, to our knowledge, the state-of-the-art of the current alternative techniques are unable to resolve the issues listed above. The approach KTR proposed by us is very promising and allows to achieve this goal in a relatively simple way. With the axioms enunciated in the Introduction, the “kinetic-type reactions” approach

  • Inline graphic

    models each actor by a dedicated ‘chemical species’ that can only be created or destroyed as the result of one, or several, elementary steps,

  • Inline graphic

    allows to determine the dynamics of the system starting from this set of elementary steps;

  • Inline graphic

    thanks to its flexibility allows to analyse complex situations where several variables are involved, such as Inline graphic, Inline graphic, Inline graphic, Inline graphic, etc.

8. Conclusions

We showed that our model is able to produce predictions not only on the first but also on the second or even the third waves of SARS-CoV2 infections. The theoretical predictions are in line with the official number of cases with minimal parameter fitting. We discussed the strengths and limitations of the proposed model regarding the long-term predictions and, above all, the duration of how long the lockdown and the quarantine measures should be taken in force in order to limit as much as possible the intensities of subsequent SARS-CoV-2 infection waves. This task has been carried out by taking into account the theoretical results recently appeared in the literature (Sonnino & Nardone, 2020) and without neglecting the delay in the reactions steps. Our model has been applied in two different situations: the spreading of the coronavirus in a small country (Belgium) and in big countries (France and Germany).

Finally, we mention that in Sonnino et al. (2021), we have incorporated real data into a stochastic model. The goal is to obtain a comparative analysis against the deterministic one, in order to use the new theoretical results to predict the number of new cases of infected people and to propose possible changes to the measures of isolation.

Footnotes

1

Notice that the first reaction in the scheme Eq. (4) is the dynamic equation for the total recovered people adopted in the SIRD model (Kermack & McKendrick, 1927).

2

We consider that the SARS-CoV-12 has just appeared for the first time. So, we do not consider the asymptomatic people who are immune to the virus without any medical treatment.

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