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Journal of Clinical Microbiology logoLink to Journal of Clinical Microbiology
. 2000 Oct;38(10):3872–3875. doi: 10.1128/jcm.38.10.3872-3875.2000

Evaluation of Different Preservation and Storage Methods for Malassezia spp.

M J Crespo 1, M L Abarca 1, F J Cabañes 1,*
PMCID: PMC87498  PMID: 11015425

Abstract

Freezing at −80°C, lyophilization, preservation in distilled water, and storage in different culture media were performed in order to find a suitable method that allowed a prolonged storage of Malassezia spp. Freezing at −80°C was the only method successful at maintaining all species.


The genus Malassezia comprises lipophilic yeasts that belong to the normal cutaneous microbiota of humans and warm-blooded animals (10), but these yeasts are also associated with a variety of diseases in humans and animals (4, 9, 11).

The taxonomy of this genus has been a matter of controversy since its creation by Baillon in 1889. The great micromorphological polymorphism and the lack of suitable methods for isolation and preservation of these yeasts were the main reasons that made their study difficult. The genus has recently been revised by means of morphology, ultrastructure, physiology, and molecular biology and enlarged to seven species: M. pachydermatis, M. furfur, M. sympodialis, M. globosa, M. obtusa, M. restricta, and M. slooffiae (5, 6). Except for M. pachydermatis, the remaining six species are lipid-dependent organisms, because they require long-chain fatty acids for in vitro growth. The isolation and identification of Malassezia spp., mainly lipid-dependent species, continue to be difficult due to low viability, especially with some of the species.

The purpose of this study was to assay different methods for preservation of microorganisms in order to find a suitable method that allowed a proper and long maintenance of Malassezia spp.

Twenty-four strains of M. pachydermatis and 11 lipid-dependent strains were used in this study. All strains were isolated from different animals except for six lipid-dependent type strains (kindly provided by E. Gricho and J. Guillot) (Table 1).

TABLE 1.

Malassezia strains used in this study

Species and isolatea Source
M. pachydermatis
 CCFVB 8 Dog otitis externa
 CCFVB 9 Cat otitis externa
 CCFVB 10 Dog otitis externa
 CCFVB 12 Dog ear (normal)
 CCFVB 14 Dog ear (normal)
 CCFVB 17 Dog ear (normal)
 CCFVB 19 Dog otitis externa
 CCFVB 20 Dog otitis externa
 CCFVB 22 Dog otitis externa
 CCFVB 24 Dog otitis externa
 CCFVB 26b Dog otitis externa
 CCFVB 27b Dog otitis externa
 CCFVB 29 Dog otitis externa
 CCFVB 32b Dog ear (normal)
 CCFVB 34b Dog otitis externa
 CCFVB 35b Dog ear (normal)
 CCFVB 36b Dog otitis externa
 CCFVB 39b Dog otitis externa
 CCFVB 41b Dog otitis externa
 CCFVB 97b Horse skin (normal)
 CCFVB 107b Goat ear (normal)
 CCFVB 140b Cat ear (normal)
 CCFVB 145b Dog skin (normal)
 CCFVB 158b Cat ear (normal)
M. furfur
 CBS 1878NTb Human pytiriasis capitis
 CBS 7019NTb Human pytiriasis versicolor
 CCFVB 157b Cat ear (normal)
M. sympodialis
 CBS 7222Tb Human skin (normal)
 CCFVB 88b Cow skin (normal)
M. slooffiae
 CBS 7956Tb Pig skin (normal)
 CCFVB 250b Horse skin (normal)
M. globosa
 CBS 7966Tb Human pytiriasis versicolor
 CCFVB 76b Goat skin (normal)
M. obtusa CBS 7876Tb Human skin (normal)
M. restricta CCFVB 79b Goat skin (normal)
a

Abbreviations: CCFVB, Culture Collection of Veterinary Faculty of Barcelona, Bellaterra, Spain; CBS: Centraalbureau voor Schimmelcultures, Baarn, The Netherlands. 

b

Strain used in freezing at −80°C, distilled water method, and preservation on different culture media. 

The strains of M. pachydermatis were grown on Sabouraud glucose agar (SGA) for 3 days at 35°C and the lipid-dependent strains on modified Dixon agar (MD) (5) for 5 days at 32°C.

After incubation, cells were harvested and suspended in 3 ml of 10% skim milk. The number of Malassezia cells was determined microscopically in a Bürker chamber, and serial dilutions in skim milk were performed to obtain final suspensions of approximately 107 and 104 cells per ml. Preservation of lipid-dependent strains was assayed only for the ∼107-cells/ml suspension.

Four different preservation methods with some variables included were studied: freezing at −80°C, freeze-drying and storage at room temperature and at −80°C, preservation in distilled water, and use of different culture media stored at 4°C, room temperature, and 28°C. All of these assays were performed in duplicate. In freezing at −80°C, glycerol and dimethyl sulfoxide (DMSO) were employed as cryoprotective agents at concentrations of 10% (vol/vol) and 5% (vol/vol), respectively (2). The solid media used to maintain M. pachydermatis strains were SGA and a medium described by Lorenzini and de Bernardis (LDB) (8). For lipid-dependent strains, the media tested were MD, Leeming's medium (LM) (7), and SGA supplemented with olive oil (10 ml per liter). The preparation of inoculum was performed in distilled water to obtain final suspensions of approximately 107 cells per ml.

Colony counts before freezing at −80°C, lyophilization, and preservation in distilled water were determined on solid media using the surface-spread method. Aliquots of 0.1 ml of the appropriate dilutions were inoculated on three plates of SGA for M. pachydermatis strains and MD and LM for lipid-dependent strains. SGA plates were incubated at 35°C for 5 days, whereas both MD and LM plates were incubated at 32°C for 7 days. In the lyophilization method, colony counts were also determined immediately after the end of the process. Colony counts were determined monthly for a year and a final check at the 18th month when the methods of freezing at −80°C, lyophilization, and preservation in distilled water were used. During the preservation of different culture media stored, the viability was first checked at day 15 and then was checked monthly for a year.

Data obtained were analyzed statistically by means of one-way analysis of variance test, Student's t test, and chi-square test. All statistical analyses were performed using SPSS software (version 8.0).

The effect of freezing at −80°C with glycerol and DMSO on the viability of Malassezia spp. is detailed in Table 2. Results are expressed as mean percentages of recovery from mean colony counts obtained before freezing for all strains tested. Mean percentages of recovery of viable M. pachydermatis cells from the suspensions of inocula estimated in a Bürker chamber of approximately 107 and 104 cells per ml, were 3.2 and 19.5%, respectively, for glycerol and 3 and 46.5%, respectively, for DMSO. Mean percentages of recovery of viable lipid-dependent species from the approximately 107-cells/ml suspension were 4.3% on MD and 3% on LM for glycerol and 4.3% on MD and 3.5% on LM for DMSO.

TABLE 2.

Effect of freezing and storage at −80°C with glycerol and DMSO on viability of Malassezia spp.a

No. of mo. % Recovery (no. of viable strains) for indicated inoculum on indicated medium
M. pachydermatis (n = 13)
Lipid-dependent species (n = 11) (107 cells/ml)
107 cells/ml
104 cells/ml
Glycerol DMSO Glycerol DMSO Glycerol
DMSO
MD LM MD LM
 1 118.4 (13) 87.2 (13) 163.0 (13) 121.7 (13) 74.2 (11) 227.0 (11) 82.7 (11) 174.9 (11)
 2 105.8 (13) 102.5 (13) 147.4 (13) 98.4 (13) 92.8 (11) 191.1 (11) 89.3 (11) 119.3 (11)
 3 126.4 (13) 90.4 (13) 175.6 (13) 98.7 (13) 76.2 (11) 185.0 (11) 70.1 (11) 122.3 (11)
 4 131.3 (13) 108.2 (13) 170.2 (13) 95.9 (13) 100.9 (11) 381.0 (11) 86.6 (11) 228.4 (11)
 5 176.3 (13) 165.0 (13) 171.5 (13) 105.1 (13) 111.4 (11) 531.2 (11) 148.2 (11) 294.7 (11)
 6 112.4 (13) 97.0 (13) 207.1 (13) 100.4 (13) 75.8 (11) 245.9 (11) 78.4 (11) 151.8 (11)
 7 144.1 (13) 101.9 (13) 195.8 (13) 108.1 (13) 96.8 (11) 518.6 (11) 86.3 (11) 258.8 (11)
 8 95.7 (13) 108.5 (13) 204.1 (13) 100.6 (13) 238.6 (11) 400.7 (11) 110.6 (11) 280.5 (11)
 9 148.7 (13) 138.9 (13) 189.6 (13) 121.9 (13) 104.3 (11) 505.7 (11) 66.8 (11) 227.6 (11)
10 103.1 (13) 89.5 (13) 193.9 (13) 116.4 (13) 104.4 (11) 669.5 (11) 79.3 (11) 342.2 (11)
11 108.1 (13) 90.5 (13) 169.2 (13) 129.2 (13) 161.0 (11) 209.4 (11) 120.3 (11) 89.9 (11)
12 102.1 (13) 93.2 (13) 184.8 (13) 174.8 (13) 99.7 (11) 159.0 (11) 39.9 (11) 60.0 (11)
18 121.4 (13) 76.6 (13) 218.8 (13) 93.7 (13) 54.4 (11) 141.2 (11) 69.0 (11) 90.6 (11)
 Total 122.6 103.8 183.9b 112.7 107.0 335.8b 86.7 187.8b
a

Results are expressed as mean percentages of recovery from mean colony counts obtained before freezing; n, number of strains tested. Mean colony counts obtained before lyophilization were as follows: for M. pachydermatis (107 cells/ml) with glycerol and DMSO, 0.32 × 106 and 0.30 × 106, respectively; for M. pachydermatis (104 cells/ml) with glycerol and DMSO, 0.19 × 104 and 0.46 × 104, respectively; for lipid-dependent species (107 cells/ml for all) with glycerol plus MD and LM, 0.43 × 106 and 0.30 × 106, respectively; and for lipid dependent species with DMSO plus MD and LM, 0.43 × 106 and 0.35 × 106, respectively. 

b

P < 0.01. 

The effect of lyophilization and storage at −80°C and at room temperature on the viability of Malassezia spp. is detailed in Table 3. Results are expressed as mean percentages of recovery from mean colony counts obtained immediately after lyophilization for all strains tested. Mean percentages of recovery of viable M. pachydermatis cells from the suspensions of inocula estimated in a Bürker chamber of approximately 107 and 104 cells per ml were 8.8 and 37%, respectively. On the other hand, mean percentages of recovery of these yeasts immediately after the lyophilization process were 43.2% (∼107-cells/ml suspension) and 64.9% (∼104-cells/ml suspension). Mean percentages of recovery of viable lipid-dependent species from the ∼107-cells/ml suspension were 4.8% on MD and 4% on LM. Mean percentages of recovery of these yeasts immediately after the lyophilization process were 31.2% on MD and 27.5% on LM from the mean counts obtained before lyophilization.

TABLE 3.

Effect of lyophilization and storage at −80°C and at room temperature on the viability of Malassezia spp.a

No. of mo. % Recovery (no. of viable strains) for indicated inoculum under indicated condition(s)
M. pachydermatis (n = 24)
Lipid-dependent species (n = 11)
−80°C
Room temperature
−80°C
Room temperature
107 cells/ml 104 cells/ml 107 cells/ml 104 cells/ml MD LM MD LM
 1 86.8 (24) 106.6 (24) 4.9 (18) 4.7 (13) 121.7 (10) 120.2 (10) 0 0
 2 70.0 (24) 114.2 (24) 2.5 (11) 0.6 (7) 96.5 (10) 87.7 (10) 0 0
 3 63.5 (24) 109.5 (24) 0.01 (8) 0.01 (5) 58.7 (9) 73.7 (9) 0 0
 4 64.8 (24) 100.1 (24) 0.0002 (3) 0.001 (1) 166.8 (10) 86.7 (10) 0 0
 5 84.7 (24) 116.4 (24) 0 0 240.0 (10) 120.3 (10) 0 0
 6 90.8 (24) 111.2 (24) 0 0 132.1 (10) 100.2 (10) 0 0
 7 96.5 (24) 93.1 (24) 0 0 104.1 (10) 139.3 (10) 0 0
 8 59.2 (24) 128.9 (24) 0 0 134.8 (9) 65.8 (10) 0 0
 9 94.7 (24) 125.5 (24) 0 0 63.2 (9) 88.0 (10) 0 0
10 78.0 (24) 114.9 (24) 0 0 136.0 (10) 135.6 (10) 0 0
11 88.1 (24) 129.0 (24) 0 0 281.4 (10) 226.9 (10) 0 0
12 85.8 (24) 111.8 (24) 0 0 103.7 (10) 75.7 (10) 0 0
18 52.3 (24) 125.7 (24) 0 0 125.4 (9) 139.1 (10) 0 0
 Total 78.1 114.4b 135.7 112.2
a

Results are expressed as mean percentages of recovery from mean colony counts obtained after lyophilization; n, number of strains tested. Mean colony counts obtained before lyophilization were as follows: for M. pachydermatis (107 and 104 cells/ml), 0.88 × 106 and 0.37 × 104, respectively; for lipid-dependent species (107 cells/ml) grown on MD and LM, 0.48 × 106 and 0.40 × 106, respectively. Mean colony counts obtained after lyophilization were as follows: for M. pachydermatis (107 and 104 cells/ml), 0.38 × 106 and 0.24 × 104, respectively; for lipid-dependent species (107 cells/ml) grown on MD and LM, 0.15 × 106 and 0.11 × 106, respectively. Mean percentages of recovery immediately after the lyophilization process from the mean colony counts obtained before lyophilization for M. pachydermatis (107 and 104 cells/ml) were 43.2 and 64.9, respectively. Mean percentages of recovery immediately after the lyophilization process from the mean colony counts obtained before lyophilization for lipid-dependent species (107 cells/ml) grown on MD and LM were 31.2 and 27.5, respectively. 

b

P < 0.01. 

The effect of preservation in distilled water on the viability of Malassezia spp. is shown in Table 4. Results are expressed as mean percentages of recovery from mean counts obtained at time zero. Mean percentages of recovery of viable M. pachydermatis cells from the suspensions of inocula estimated in a Bürker chamber of ∼107 and 104 cells per ml were 3.6 and 23%, respectively. Mean percentages of recovery of viable lipid-dependent species from the ∼107-cells/ml suspension were 0.9% on MD and 1% on LM.

TABLE 4.

Effect of preservation in distilled water on the viability of Malassezia spp.a

No. of mo. % Recovery (no. of viable strains) for indicated inoculum under indicated condition
M. pachydermatis (n = 13)
Lipid-dependent species (n = 11) (107 cells/ml)
107 cells/ml 104 cells/ml MD LM
1 0.004 (6) 0.3 (1) 0.05 (3) 0.003 (3)
2 0.0003 (2) 0 0.004 (2) 0.02 (3)
3 0.0003 (1) 0.07 (1) 0.003 (2) 0.01 (2)
4 0.00007 (1) 0.1 (1) 0.001 (1) 0.0001 (1)
5 0.00007 (1) 0 0 0
6 0 0 0 0.0008 (1)
7 0 0 0 0
8 0 0 0 0
9 0 0 0 0
10 0 0 0 0
11 0 0 0 0
12 0 0 0 0
18 0 0 0 0
a

Results are expressed as mean percentages of recovery from mean colony counts obtained at time zero; n, number of strains tested. Mean colony counts obtained at time zero were as follows: for M. pachydermatis (107 and 104 cells/ml), 0.36 × 106 and 0.23 × 104, respectively; for lipid-dependent species (107 cells/ml) grown on MD and LM, 0.95 × 105 and 0.10 × 106, respectively. 

The number of viable M. pachydermatis strains stored in different solid media at 4°C, room temperature, and 28°C are detailed in Table 5. This method of preservation was also unsuccessful for maintaining viable M. pachydermatis. Although SGA and LDB were very inefficient for maintaining M. pachydermatis strains, SGA recovered a higher number of strains than LDB and particularly in the first months at 28°C.

TABLE 5.

Number of viable M. pachydermatis strains stored in different solid media at various temperatures (n = 13)

No. of mo. No. of viable strains on indicated medium at temp
SGA
LDB
4°C RTa 28°C 4°C RT 28°C
0.5 13 13 13 11 3 7
1 8 11 13 5 0 5
2 1 5 13 0 0 6
3 2 5 11 0 0 6
4 0 5 13 0 0 2
5 0 3 12 0 0 1
6 0 3 6 0 0 1
7 0 1 4 0 0 0
8 0 0 1 0 0 0
9 0 0 0 0 0 0
10 0 0 0 0 0 0
11 0 0 0 0 0 0
12 0 0 0 0 0 0
a

RT, room temperature. 

The number of viable lipid-dependent strains stored in different solid media at 4°C, room temperature, and 28°C are detailed in Table 6. M. globosa CBS 7966T and M. globosa CCFVB 76 did not grow on MD at the concentration of inoculum assayed in this method. Therefore, the maintenance on this culture medium was not performed for these strains. Maintenance of lipid-dependent species on different solid media was not a good method of preservation. Similar results were obtained for the different culture media assayed and for both media utilized for the recovery of viable yeasts.

TABLE 6.

Number of viable lipid-dependent strains stored in different solid media at various temperatures (n = 11)a

No. of mo. No. of viable lipid-dependent strains stored in indicated medium at indicated temp
MDb
LM
SGA + olive oil
4°C
RTc
28°C
4°C
RT
28°C
4°C
RT
28°C
MD LM MD LM MD LM MD LM MD LM MD LM MD LM MD LM MD LM
0.5 8 7 9 9 9 9 9 8 8 7 11 11 9 8 10 8 10 9
1 9 7 9 8 8 8 6 5 9 8 11 11 10 6 10 9 9 9
2 7 7 8 6 8 8 6 5 8 7 10 10 4 4 8 7 8 7
3 2 2 5 5 7 7 1 0 6 5 10 10 3 3 6 6 8 7
4 1 1 4 4 7 6 1 0 4 4 11 11 4 4 5 6 8 7
5 1 2 3 3 4 4 0 0 4 4 8 8 3 2 5 5 7 7
6 1 0 3 3 5 5 0 0 3 3 9 8 2 3 5 4 7 7
7 1 0 3 3 5 6 0 0 4 4 8 8 2 3 4 4 8 7
8 0 0 3 3 4 5 0 0 3 3 7 7 2 2 3 3 5 5
9 0 0 2 2 1 1 0 0 3 3 6 7 0 1 4 4 5 5
10 0 0 1 1 2 2 0 0 3 3 5 4 2 2 4 4 6 6
11 0 0 2 2 1 1 0 0 2 2 3 2 1 1 2 2 4 4
12 0 0 1 1 1 1 0 0 2 2 3 3 1 0 2 2 3 3
a

Each strain was originally grown on MD or LM. 

b

The two strains of M. globosa (CBS 7966T and CCFVB 76) did not grow on MD at the concentration of inoculum assayed. 

c

RT, room temperature. 

The low viability of the yeasts of the genus Malassezia and their difficult maintenance in vitro, especially with some species, constitute the main difficulties that affect the study of this genus (1, 5, 8, 10). In all cases a sharp decrease resulted from the suspensions of inocula estimated in the Bürker chamber in our study.

The methods of preservation assayed in this study are classic methods for maintenance of bacteria and fungi (2, 12, 13). The majority of yeasts can be stored at temperatures between 4 and 12°C and subcultured at intervals of 6 to 8 months (13). However, Malassezia spp. do not fit this pattern.

In our study, freezing at −80°C was the only successful method to maintain viable all Malassezia spp., particularly M. globosa, M. restricta, and M. obtusa, which were reported as difficult species to maintain in vitro (5). However, the best results were obtained when glycerol was used as the cryoprotective agent. It has been reported that the use of skim milk in combination with glycerol is an excellent cryoprotective agent for the preservation of bacteria (3). In this method, mean percentages of recovery were >100% in many cases, especially with the lipid-dependent yeasts.

Homogeneous suspensions are very difficult to obtain with these yeasts and in particular with the lipid-dependent species due to clustering. The cryoprotective agents would facilitate the dispersal of the yeasts, yielding mean recoveries of >100%. The highest mean percentages of recovery were obtained with the lowest suspension of inoculum assayed in M. pachydermatis freezing. In this method, LM improved the mean percentages of recovery of lipid-dependent species. LM was described (7) as the best culture medium for isolation and enumeration of M. furfur in comparison to MD and Faergemann and Fredriksson's medium.

In our study, lyophilization and storage of the freeze-dried cultures at room temperature was an unsuitable method for preservation of Malassezia spp. However, when these freeze-dried cultures were stored at −80°C, all strains tested were recovered except for M. globosa CCFVB 76. Other authors observed that this species does not survive lyophilization (5, 10). Some authors recommend the storage of the freeze-dried cultures between 15 and 18°C, and others recommend storage between 4 and 18°C (12). However, Malassezia spp. only survived when the freeze-dried cultures were stored at −80°C. The best results for the lyophilization and storage at −80°C of M. pachydermatis were obtained with the suspension of approximately of 104 cells per ml.

Among the different methods used to preserve fungi, the distilled water method and preservation on different culture media are two of the more-utilized methods, because they are technically simple and easy to perform. Nevertheless, in our study they were unsuccessful methods for maintaining the yeasts of the genus Malassezia.

As has been mentioned previously, the low viability of Malassezia spp. constitutes one of the main difficulties in the study this genus. Due to the reclassification of the Malassezia genus into seven species and the isolation of new strains from different origins, these results might be considered as preliminary in nature and should be substantiated with further studies on the preservation of Malassezia isolates. According to our findings, we recommend the method of freezing at −80°C immediately after the first isolation in order to avoid the loss of isolates.

Acknowledgments

We thank Pedro Puig (Autonomous University of Barcelona) for his help with the statistical analysis in this study.

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