Table 2. Primer sequences used for gene expression analysis with qPCR.
| rpl13a | GeneID:103025160 | ENSAMXG00000033532 | caagtactgctgggccacaaag | aggaaagccaggtacttcaatttgtt |
| gfi1aa | GeneID:103029320 | ENSAMXG00000006669 | agtgtgtgtgatcgaccttcaga | ggacattcttcattgtctggtgacg |
| hbbe2 | ENSAMXG00005017210* | taaatccctctgcagggctctgat | cctgatcacctccggattagccataata | |
| hbb2 | GeneID:111196758 | ENSAMXG00000031275 | gctcacggtgtagttgttctc | ggatccacgtgcagtttctc |
| gnb1b | GeneID:103023031 | ENSAMXG00000040710 | ctctgctaaactgtgggatgtg | ccgttagggaagaaacagatgg |
| hif1aa | GeneID:103022448 | ENSAMXG00000039550 | cagcaccaacacacacactcaa | gtcactgaccaccagtcctaca |
| hif1ab | GeneID:103033873 | ENSAMXG00000019342 | gcatgggccttacacagttt | gcaccagcatttccctcatt |
| hif1alike | GeneID:103027586 | ENSAMXG00000008564 | tgcctcacctgcttctaactct | agctgtattctcctctggcttga |
| hif1alike2 | GeneID:103041845 | ENSAMXG00000007272 | cattctaagttccagcccatcc | cattggctgcaccatctctc |
| hk1 | GeneID:103028521 | ENSAMXG00000012670 | ctcaatcggctgaaggacaacaa | agccgtcgagaatactgtggat |
| g6pd | GeneID:103035433 | ENSAMXG00000017509 | tcctactctgtggtggttgtt | gagacggtctgcttcagtatct |
| ldha | GeneID:103047177 | ENSAMXG00000032467 | tgtggtgtccaacccagttgata | agcgagctgagtccaagttagt |
| pdk1 | GeneID:103033744 | ENSAMXG00000039808 | tcctcaaccagcacactcttct | agtgacacgacagtgaggatcaa |
| igfbp1a | GeneID:103033920 | ENSAMXG00000009512 | cccaacagaagctggaagataag | ctgcccatccagagttgattc |
*
blasts to the cavefish genome but also cloned from surface fish in this study.