Association of the HtrA1 rs11200638 Polymorphism with Neovascular Age-Related Macular Degeneration in Indonesia

Abstract

Introduction

The aim of this study was to investigate the association of the HtrA1 rs11200638 polymorphism with neovascular age-related macular degeneration (nAMD) in Indonesia.

Methods

This case–control study included 80 patients with nAMD and 85 controls. Demographic parameters and whole blood were collected from each participant. Genomic DNA was extracted and used to assess the rs11200638 genotype by PCR and restriction enzyme digestion. Associations between the HtrA1 rs11200638 polymorphism and other risk factors for susceptibility to nAMD were assessed using the logistic regression model.

Results

Significant allelic associations between the HtrA1 polymorphism and nAMD were detected (odds ratio [OR] 8.67; 95% confidence interval [CI] 4.88–15.41; P < 0.001). Genotype analysis showed a statistical difference between the nAMD group and the control group (P < 0.001). In the multiple adjusted logistic regression model, people with the AA genotype were more likely to have nAMD although there was a wide confidence interval (OR 19.65; 95% CI 4.52–85.38; P < 0.001).

Conclusion

Our findings show that the risk of nAMD increased in the presence of risk alleles of HtrA1 rs11200638.

Key Summary Points

The HtrA1 rs11200638 polymorphism is associated with the risk of neovascular age-related macular degeneration (nAMD) in Indonesian patients.

The presence of hypertension compounds the genetic risk for nAMD.

The results of this study are in accordance with those of other epidemiological studies involving patients of different ethnicity in supporting the hypothesis that HtrA1 contributes to the risk of nAMD.

Introduction

Age-related macular degeneration (AMD) is a progressive degenerative disease affecting the macula and is among the five leading causes of vision loss worldwide [1]. AMD results from a sequence of deterioration processes that occur in photoreceptors, the retinal pigment epithelium (RPE), and Bruch’s membrane (BM). These result in an irreversible lesion that manifests clinically as geographic atrophy (dry AMD) or they cause aberrant blood vessels originating from the choroid to leak at the macular region (neovascular AMD [nAMD]). If untreated, these conditions can lead to permanent vision loss. It is notable that that not all aged individuals follow the similar processes and develop AMD, implying a genetic-driven pathophysiology of the disease process.

High-temperature requirement A1 (HtrA1) is one of important genetic factors in nAMD etiology, in addition to Age-related maculopathy susceptibility 2 (ARMS2) and Complement factor H (CFH). The HtrA1 genetic variant rs11200638 is located precisely at the HtrA1 promoter. The three most strongly associated loci identified to date are located on chromosome one (1q31), CFH (rs1061170), chromosome 10 (10q26), ARMS2 (rs10490924; del443ins54), and HtrA1 (rs11200638) [2]. In an earlier study, we have shown that the ARMS2 rs10490924 and del443ins54 variants show a strong association with nAMD in Indonesia [3]. The position of the rs11200638 polymorphism in the genome is very close to those of the rs10490924 and del443ins54 polymorphisms [4–7]. These single nucleotide polymorphisms segregate together during chromosome crossing-over, resulting in almost all cases having the same status (wildtype, carrier, and mutant homozygote) with each other. Research has also shown that these two loci are highly predictive (i.e., in near perfect linkage disequilibrium [D′ > 0.98]) for AMD [7]. Therefore, investigation of the presence of the rs11200638 polymorphism in Indonesia will provide a large overview of the epidemiology and pathogenesis of nAMD.

Replication studies on different ethnic populations show consistent results [7–20], but there are no reports on Indonesian populations. In addition to CFH and ARMS2 [3], no other genetics factors have been examined in Indonesia. The aim of this study was to investigate the associations of HtrA1 with nAMD in the Indonesian population, of which the majority ethnic group is the Asian Malay group.

Methods

This case–control study included participants aged ≥ 45 years. Between 2016 and 2018 we recruited 80 patients with nAMD and 85 age-matched control participants into this study.The purpose of the research and the procedures were fully explained prior to the participants signing an informed consent form and undergoing blood collection and comprehensive ophthalmologic examinations. The study was approved by the Medical and Health Research Ethics Committee of the Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada (ethics number: KE/FK/864/EC [5 August 2016]; KE/FK/1109/EC/2017 [12 October 2017]; KE/FK/1108/EC/2018 [18 October 2018]). This study adhered to the ethical standards of the Declaration of Helsinki of 1964 and its later amendments. The inclusion/exclusion criteria and the criteria for AMD diagnosis were as reported previously [3].

Genotyping

The procedures followed for extraction of the genomic DNA and gene amplification were as described previously [3]. The primer sequences were: forward 5′-TTCCCATCTGAGACCGCT-3′ and reverse 5′-GGAAAGTTCCTGCAAATCG-3′ [17]. The PCR cycling conditions were: 1 cycle of 95 °C for 10 min, followed by 35 cycles of 95 °C for 45 s, 55 °C for 45 s, 72 °C for 45 s, with a final cycle of 72 °C for 5 min. For genotype discrimination, the 400-bp amplicon was digested with 5 U of EagI restriction enzyme (New England BioLabs, Ipswich. MA, USA) by an overnight incubation at 37 °C. Following electrophoresis in 2% agarose gels, the DNA bands were visualized with fluorosafe DNA staining (1st Base Asia, Selangor, Malaysia; Cat. No. BIO-5170-1 ml). The undigested samples were determined to be the AA genotype, whereas the partially or totally digested samples were designated the AG or GG genotype. Sanger sequencing was used to verify each genotype (AA; GA; GG) in the nAMD patient and control groups.

Statistical Analysis

A complete case analysis of those with complete covariate and genetic data was performed. Statistical analysis, including the Hardy–Weinberg equilibrium (HWE) test and multivariable logistic regression, were performed using STATA® version 16 (StataCorp, College Station, TX, USA) as reported previously [3].

Results

Blood samples were collected from 80 patients with nAMD and 85 controls, all of whom were Indonesian. The cases and controls were similar in terms of demographic data (Table 1). The average age of the patient and control groups was 67.3 and 68.2 years, respectively; 50.0 and 54.0% of the patient and control groups were female; and the mean body mass index (BMI) for AMD cases and controls was 23.6 and 22.2 kg/m², respectively. Most participants were predominantly working indoors with less exposure to sunlight (72% for both AMD cases and controls). The number of AMD patients with high blood pressure was significantly higher in the nAMD group than in the controls.

Table 1.

Demographic characteristics of study participants

Demographic characteristics	Case group (n = 80)	Control group (n = 85)	P
Age, years			0.49
Range (median)	45–82 (67.5)	49–99 (69)
Mean ± SD	67.3 ± 8.4	68.2 ± 7.8
Sex			0.55
Male	33 (41.0%)	39 (46.0%)
Female	47 (59.0%)	46 (54.0%)
BMI (kg/m2)			0.02
Range (median)	16.7–37.1 (23.3)	15.2–36.8 (21.5)
Mean ± SD	23.6 ± 3.5	22.2 ± 4.2
Sunlight exposure			0.92
Indoor workplace	58 (72.0%)	61 (72.0%)
Outdoor workplace	22 (28.0%)	24 (28.0%)
Smoking			0.75
Never	61 (76.0%)	63 (74.0%)
Ever	19 (24.0%)	22 (26.0%)
Blood pressure			< 0.001
Normal blood pressure	44 (55.0%)	68 (80.0%)
High blood pressure	36 (45.0%)	17 (20.0%)

BMI Body mass index, nAMD neovascular age-related macular degeneration, SD standard deviation

The allele and genotype distributions of the HtrA1 rs11200638 polymorphism are summarized in Table 2. Comparison of the cases and controls revealed a statistically significant difference in the allele or genotype distributions of HtrA1 rs11200638 (P < 0.001). The A allele frequency was 88.7% in nAMD patients and 42.2% in controls. There was a higher percentage of AA genotypes in the nAMD group (77.4%) than in the control group (22.6%), and the opposite was true for AG genotypes, which were less frequent in the nAMD group (21.8%) than in the control group (76.2%). The unconditional logistic regression analysis showed that the A allele was associated with an increased risk of nAMD (odds ratio [OR] 8.67; 95% confidence Interval [CI] 4.88–15.41; P < 0.001). Similarly, an association was found in adjusted logistic regression model with a per-A-allele OR of 3.73 (95% CI 1.11–12.56; P = 0.034).

Table 2.

Distribution of alleles and genotypes of the HtrA1 rs11200638 polymorphism

Allele	Allele distribution, n (%)		P	Genotype	Genotype distribution, n (%)		P value	P (HWE)
	Case group	Control group			Case group	Control group
G	18 (11.3%)	89 (57.8%)	< 0.001	GG	3 (11.5%)	23 (88.5%)	< 0.001	0.204
A	142 (88.7%)	65 (42.2%)		GA	12 (21.8%)	43 (76.2%)
				AA	65 (77.4%)	19 (22.6%)

CI Confidence interval, HWE Hardy–Weinberg equilibrium in control group, OR odds ratio

Individuals with the AA genotype were found to have strong association with nAMD in the unadjusted logistic regression analysis (OR 26.23; 95% CI: 7.10–96.93; P < 0.001), age- and sex-adjusted logistic regression analysis (OR 26.85; 95% CI 7.10–101.49), and the multiple variable logistic regression analysis (OR 19.65; 95% CI 4.52–85.38; P < 0.001) (Table 3). Additionally, the multiple variable logistic regression analysis showed that hypertension was associated with an increased risk for nAMD (OR 3.4; 95% CI 1.30–8.95; P = 0.013). No significant association was found between BMI and smoking with nAMD in the multiple variable logistic regression analysis (P ≥ 0.05).

Table 3.

Association between the HtrA1 rs11200638 polymorphism and nAMD in an Indonesian population

Genotype	Crude OR (95% CI)	P	Adjusted OR (95% CI)a	P	Adjusted OR (95% CI)b	P
GG	1.00 (reference)	–	1.00 (reference)	–	1.00 (reference)	–
GA	2.14 (0.55–8.36)	0.274	1.80 (0.45–7.22)	0.409	1.37 (0.30–6.21)	0.683
AA	26.23 (7.10–96.93)	< 0.001	26.85 (7.10–101.49)	< 0.001	19.65 (4.52–85.38)	< 0.001

^aAdjusted for age and sex

^bAdjusted for smoking, body mass index, and blood pressure

Discussion

We identified an association between the HtrA1 rs11200638 polymorphism and nAMD in an Indonesian population. However, these results should be interpreted cautiously due to the wide confidence interval, possibly due to the small sample size [21]. The findings from this gender and age-matched case–control study suggest that either A alleles or AA genotypes of the HtrA1 rs11200638 polymorphism were associated with the onset of nAMD. Patients with the AA genotype were more prone to have AMD by nearly 26-fold. The association remained strong after data adjustment with smoking, BMI, and blood pressure. People with the AA genotype had a 20-fold increased risk of having nAMD than those with the GG genotype. This finding is similar to results from other studies in other ethnic groups [12, 17–19, 22–24].

An association between HtrA1 and nAMD has also been found in other countries (Table 4). In Southeast Asia, similar results were also reported in Malaysia [23].

Table 4.

Results from studies on the association between the HtrA1 polymorphism and nAMD

References	Location	Ethnicity	Sample	OR (95% CI)
DeWan et al. [8]	China	Chinese	96 cases and 130 controlsa	ORhom = 10 (4.38–22.82)
Mori et al. [13]	Japan	East Asian	123 cases and 133 controlsa	ORhom = 5.59 (2.66–11.76)
Lin et al. [14]	Taiwan	Taiwanese Chinese	95 cases and 90 controlsb	ORhet = 1.97 (0.81–4.81), ORhom = 8.59, (3.28–22.49)
Yan et al. [25]	China	Han Chinese	109 cases, 150 controls	OR GA + AA = 2.02 (1.20–3.39)
Tam et al. [15]	China	Chinese	163 cases and 183 controlsb	ORhet = 1.88 (0.96–3.66) ORhom = 7.6 (3.94–14.51)
Gong et al. [16]	China	Chinese	99 cases and 73 controls	ORhom = 4.19 (2.28–7.70)
Lana et al. [17]	Brazil	South American	204 cases and 166 controls	ORhom = 25.97 ± 4.42 (16.75–34.32)
Abbas and Azzazy [18]	Egypt	Arabic	26 cases and 20 controls	ORhet+hom = 6 (1.4–24.7)
Kaur et al. [19]	India	East Asian	250 cases and 250 controls	ORhom = 6.69 (3.69–12.10)
Matušková et al. [24]	Czech Republic	Czech population	307 cases and 191 controls	OR = 16.02 (5.4–47.54)
Francis et al. [20]	Northern Europe	Caucasian	333 cases and 171 controlsa	ORhom = 3.973 (2.928–5.390)
Gili et al. [9]	Spain	Spanish Caucasian	187 cases and 196 controls	ORhom = 6.44 (3.62–11.47)
Yang et al. [10]	USA	Caucasian	581 cases and 309 controls	ORhet = 1.90 (1.40, 2.58), ORhom = 7.51 (3.75, 15.04)
Gibbs et al. [7]	USA	Caucasian	342 cases and 215 controlsb
Chen et al. [12]	USA	Caucasian	774 cases and 294 controlsb; 192 bilateral nAMD, 278 unilateral nAMD, 234 bilateral GA, 72 unilateral GA	Bil ORhom = 10.95 (5.26–22.77) Uni ORhom = 5.62 (2.65–11.90)
DeAngelis et al. [11]	USA	Caucasian	73 sib pairsc	ORhom = 98.41 (13.45–720.08 P < 10−5) ORhet = 6.05 (2.13–17.21; P < 10−3)
Mohamad et al. [23]	Malaysia	Asian	145 cases, 145 controls	ORhom = 1.52 (1.07–2.15)

GA Geographic atrophy

^aAge-matched controls

^bAge-matched and sex-matched controls

^cControl was a sibling of each patient

The HtrA1 rs11200638 polymorphism is widely reported to be highly associated with the risk for nAMD worldwide. Epidemiological studies have shown that, compared to people with the GG genotype, those with the AA genotype in the Chinese population have a tenfold increased risk for nAMD [8] and their Caucasian counterparts have a 7.5-fold increased risk [10]. This higher risk of AA genotype for nAMD was reconfirmed in other studies involving Caucasian populations [7, 12]. The A allele and AA genotypes have also associated with the dry forms of AMD in addition to nAMD in Chinese Taiwanese subjects [14]. Another Chinese study showed a 7.6-fold increased risk in subjects with the A allele, with smoking status compounding the risk to 15.7-fold [15]. Studies in Middle East [18], India [19], and Brazil [17] have shown similar results. Individuals with the AG and AA genotype have been found to have a 2.2- and 8.7-fold higher risk of developing AMD, respectively, when compared with those who carry the GG genotype [26].

The HtrA1 gene encodes a serine protease, and this protease is produced by many tissues, including the RPE [27]. This protein plays an important role in the breakdown of many components of the extracellular matrix (ECM) [27–29]. It has been hypothesized that these breakdowns of ECM proteins is related to development of neovascularization [27, 29].

A high concentration of HtrA1 has been found in the aqueous humor of nAMD patients, with subsequent decrease following intravitreal injections of 0.5 mg ranibizumab [31]. The HtrA1 polymorphism was also reported to be associated with the AMD onset in the second eye [12]. The association of the HtrA1 polymorphism to the response to ranibizumab treatment in nAMD has not been consistent in studies [23, 26, 32, 33]

The main limitations of our study are the small sample size and the hospital-based design. The design may have only captured the advanced profiles of AMD patients, thereby masking the true representation of AMD in general population. Future studies should include larger and more diverse sample sizes to allow subanalyses based on ethnic origin in Indonesia. Identifying other target genes related to AMD in the Indonesian population is also warranted as this study is only the second study on the genetic factors associated with nAMD and only the second study on AMD in Indonesia.

Conclusions

We identified that the HtrA1 rs11200638 polymorphism is significantly associated with risk of nAMD albeit with a wide confidence interval.