Table 1.
Strain Number | Viral Species | Isolation Material | Host | Country | Year of Isolation | Accession Number |
---|---|---|---|---|---|---|
TE.362447.2020 | WNV L1 | Homogenate | Northern goshawk | Italy | 2020 | MW627239 |
TE.15803.2008 | WNV L1 | - | Magpie | Italy | 2008 | FJ483548 |
TE.15217.2008 | WNV L1 | - | Magpie | Italy | 2008 | FJ483549 |
TE.229892.2008 | WNV L1 | - | Magpie | Italy | 2008 | KU573077 |
Ita09 | WNV L1 | Blood | Human | Italy | 2009 | GU011992 |
Italy/2009/J-225677 | WNV L1 | C636 cells P1, Vero cells P3 | Eurasian jay | Italy | 2009 | JF719068 |
Italy/2009/FIN | WNV L1 | - | Human | Italy | 2009 | KF234080 |
Italy/2008/J-242853 | WNV L1 | C636 cells P1, Vero cells P3 | Eurasian jay | Italy | 2008 | JF719065 |
Italy/2009/G-223184 | WNV L1 | C636 cells P1, Vero cells P3 | Gull | Italy | 2009 | JF719067 |
Italy/2008/M-203204 | WNV L1 | C636 cells P1, Vero cells P3 | Magpie | Italy | 2008 | JF719066 |
204913/2009 | WNV L1 | - | Culex pipiens mosquito | Italy | 2009 | KU573078 |
TE.14444.2011 | WNV L1 | Organ pool | Magpie | Italy | 2011 | MW835356 |
TE.17196.2011 | WNV L1 | Organ pool | Owl | Italy | 2011 | MW835357 |
TE.17208.2011 | WNV L1 | Organ pool | Crow | Italy | 2011 | MW835358 |
TE.20224/1.2011 | WNV L1 | Plasma | Chicken | Italy | 2011 | MW835359 |
TE.21370.2011 | WNV L1 | Plasma | Horse | Italy | 2011 | MW835361 |
TE.20875.2011 | WNV L1 | Organ pool | Eurasian jay | Italy | 2011 | MW835360 |
TE.23237.2011 | WNV L1 | Plasma | Chicken | Italy | 2011 | MW835363 |
TE.20224/8.2011 | WNV L1 | Plasma | Chicken | Italy | 2011 | Under publication |
TE.21412.2011 | WNV L1 | Brain | Owl | Italy | 2011 | MW835362 |
04.05 | WNV L1 | Brain | Horse | Morocco | 2003 | AY701413 |
PT5.2 | WNV L1 | - | - | Portugal | 2004 | AJ965628 |
PT6.16 | WNV L1 | - | - | Portugal | 2009 | AJ965626 |
Spain/2010/H-1b | WNV L1 | Brain | Horse | Spain | 2010 | JF719069 |
WN Italy 1998-equine | WNV L1 | - | Equine | Italy | 1998 | AF404757 |
96-111 | WNV L1 | Brain | Equine | Morocco | 1996 | AY701412 |
PaAn001 | WNV L1 | - | - | France | 2003 | AY268132 |
France 405/04 | WNV L1 | Brain | House sparrow | France | 2004 | DQ786572 |
WNV_0304h_ISR00 | WNV L1 | - | Human | Israel | 2000 | HM152775 |
GE-2o/V | WNV L1 | Vero cells | Golden eagle | Spain | 2007 | FJ766332 |
GE-1b/B | WNV L1 | BSR cells | Golden eagle | Israel | 2007 | FJ766331 |
HU6365/08 | WNV L1 | - | Culex perexiguus mosquito | Spain | 2008 | JF707789 |
RO97-50 | WNV L1 | - | Culex pipiens mosquito | Romania | 1996 | AF260969 |
KN3829 | WNV L1 | - | Culex univittatus mosquito | USA | 2003 | AY262283 |
VLG-4 | WNV L1 | Brain | Human | Russia | 1999 | AF317203 |
Tomsk/bird/2006/A4 | WNV L1 | - | Blyth’s reed warbler | Russia | 2006 | MN149538 |
LEIV-Vlg99-27889 | WNV L1 | Brain | Human | Russia | 1999 | AY277252 |
LEIV-Vlg00-27924 | WNV L1 | Blood | Human | Russia | 2000 | AY278442 |
Italy/2012/Livenza/37.1 | WNV L1 | Urine | Human | Italy | 2012 | KC954092 |
Italy/2012/Livenza/31.1 | WNV L1 | Culture viral isolate from blood | Human | Italy | 2012 | JX556213 |
Italy/2013/Livenza/35.1 | WNV L1 | Plasma | Human | Italy | 2013 | KF647253 |
Italy/2011/Livenza | WNV L1 | Plasma | Human | Italy | 2011 | JQ928174 |
Italy/2013/Livenza/37.1 | WNV L1 | Urine | Human | Italy | 2013 | KF823807 |
Akela/France/2015 | WNV L1 | - | Human | France | 2015 | MT863559 |
Italy/2011/AN-1 | WNV L1 | Urine | Human | Italy | 2011 | JN858069 |
Italy/2011/Piave | WNV L1 | Urine | Human | Italy | 2011 | JQ928175 |
WNV_Cy2016 | WNV L1 | Urine | Human | Cyprus | 2016 | MF797870 |
T2 | WNV L1 | Blood | Equine | Turkey | 2011 | KJ958922 |
ArB310/67 | WNV L1 | - | - | Central African Republic | 1967 | GQ851608 |
IBAN7019 | WNV L1 | - | - | Nigeria | 1965 | GQ851607 |
ArD27875 | WNV L1 | - | Mosquito | Senegal | 1979 | GQ851606 |
PaH001 | WNV L1 | - | - | France | 2003 | AY268133 |
NY99-flamingo382-99 | WNV L1 | Chicken embryo | Flamingo | USA | 1999 | AF196835 |
ABB-B13 | WNV L1 | - | Mouse | Spain | 2007 | KC407667 |
NY99 | WNV L1 | Vero cell P2 | - | USA | 1999 | NC009942 |
NY99iso-1 | WNV L1 | Vero cell E6 | - | Japan | 2007 | FJ411043 |
NY99-crow-V76/1 | WNV L1 | - | American crow | USA | 1999 | FJ151394 |
3356K VP2 | WNV L1 | Kidney | American crow | USA | 2000 | EF657887 |
WNV-1/US/BID-V6527/2001 | WNV L1 | Kidney and Spleen | American crow | USA | 2001 | KJ501343 |
WNV-1/US/BID-V6506/2002 | WNV L1 | Kidney and Spleen | American crow | USA | 2002 | KJ501489 |
Ast99-901 | WNV L1 | Blood | Human | Russia | 1999 | AY278441 |
KN3829 | WNV L1 | - | Culex univittatus mosquito | Kenya | 1998 | AF146082 |
RO97-50 | WNV L1 | - | - | Romania | 1997 | AF130362 |
SEN-ArD93548 | WNV L1 | - | Mosquito | Senegal | 1993 | AF001570 |
Dak Ar D 5443 | KOUTANGO VIRUS | - | - | Senegal | 2013 | EU082200 |
Relevant data regarding the isolates used for the present study.