Promising bioactive compounds from the marine environment and their potential effects on various diseases

Abstract

Background

The marine environment hosts a wide variety of species that have evolved to live in harsh and challenging conditions. Marine organisms are the focus of interest due to their capacity to produce biotechnologically useful compounds. They are promising biocatalysts for new and sustainable industrial processes because of their resistance to temperature, pH, salt, and contaminants, representing an opportunity for several biotechnological applications. Encouraged by the extensive and richness of the marine environment, marine organisms’ role in developing new therapeutic benefits is heading as an arable field.

Main body of the abstract

There is currently much interest in biologically active compounds derived from natural resources, especially compounds that can efficiently act on molecular targets, which are involved in various diseases. Studies are focused on bacteria and fungi, isolated from sediments, seawater, fish, algae, and most marine invertebrates such as sponges, mollusks, tunicates, coelenterates, and crustaceans. In addition to marine macro-organisms, such as sponges, algae, or corals, marine bacteria and fungi have been shown to produce novel secondary metabolites (SMs) with specific and intricate chemical structures that may hold the key to the production of novel drugs or leads. The marine environment is known as a rich source of chemical structures with numerous beneficial health effects. Presently, several lines of studies have provided insight into biological activities and neuroprotective effects of marine algae, including antioxidant, anti-neuroinflammatory, cholinesterase inhibitory activity, and neuronal death inhibition.

Conclusion

The application of marine-derived bioactive compounds has gained importance because of their therapeutic uses in several diseases. Marine natural products (MNPs) display various pharmaceutically significant bioactivities, including antibiotic, antiviral, neurodegenerative, anticancer, or anti-inflammatory properties. The present review focuses on the importance of critical marine bioactive compounds and their role in different diseases and highlights their possible contribution to humanity.

Background

Natural products have been used for the treatment of human ailments since the beginning of mankind. Ocean remains as one such treasure for natural products. The oceans cover more than three-quarters of the earth’s surface and harbor most of the planet’s diversity. But the marine biotope, which is still an unexplored area, can provide us with rich novel natural products. For decades, microbial natural products have been the reservoir for drug discovery, yet the microorganisms inhabiting the world’s oceans have largely been overlooked in this regard [1]. Microbial communities in extreme environments have immense potential as unexploited resources discovering bioactive molecules or novel drugs. Among the potential sources of natural products, bacteria have been proven to be a prolific source with a surprisingly small group of taxa accounting for the vast majority of compounds discovered [2].

Although more than 100 drugs exist today that come from terrestrial microorganisms, arguably the most important drug in medicine is the potential from land-based microbial sources, which began to dwindle nearly 10 years ago. Pharmaceutical investigators searched around the globe for new terrestrial, drug-producing microbes, but with diminishing payback [3].

The first serious effort in studying marine natural products started in 1951 with Bergman and Feeney’s pioneering work that resulted in the isolation of spongothymidine and spongouridine from the sponge Cryptotethya crypta Laubenfels. This finding led to the synthesis of arabinosyl cytosine (Ara-C), a marine-derived anticancer agent used mainly to treat different forms of leukemia. Since the 1950s, marine organisms have been shown to be rich sources of structurally novel and biologically active metabolites, constituting valuable opportunities for drug discovery, an area of extreme importance among the scientific community [4].

Although more than 30,000 diseases have been clinically described, less than one-third of these can be treated symptomatically, and only a few can be cured. New therapeutic agents are needed to treat medical needs that are currently unmet. Natural products once played a major role in drug discovery. The marine environment coves more than 70% of the world’s surface. In the past, this has proven to be a rich source of extremely potent compounds, which represent a considerable number of drug candidates [4]. However, to date, the biodiversity of marine microbes and the versatility of their bioactive metabolites have not been fully explored.

The marine environment was once thought to have high salt, poor nutrition, and less microbial growth. On the contrary, soil microbes are widely regarded as living in a more crowded and competitive environment. The ecology of marine natural products reveals that many of the compounds isolated from the marine source are chemical weapons and have evolved into highly potent inhibitors of biological processes in the prey, predators, or competitors of the marine organisms that utilize them for survival [5].

Main text

Introduction

Marine sources have played a significant role as an origin for lead molecules ascertained for various pharmacological utilizations in recent times. Interestingly, marine microorganisms remain as the most undiscovered and essential provenience of umpteen bioactive metabolites. From the shallow water in the seashore to the abysmal seaward areas that canvas 70% of the biosphere, microorganisms engross an endurable stretch [6]. The varying temperature, pressure, and source of light in the marine system compared to the terrestrial environment possibly helps in producing novel secondary metabolites by some marine organisms.

Microbes, especially in the marine environment, can withstand high salt concentrations, high pressure, nutrition depletion, and cold temperatures. Natural sources producing biological materials, screened by high throughput screening methods for their therapeutic activity, lead to developing a commercially viable process or product [7]. Bioprospecting marine habitat is one of the most prolific platforms because of its diverse and under passed microbial population. Microbes can easily detect, adapt, and react to their environment and compete by producing specific secondary metabolites for protection and survival. These compounds developed in reaction to stress have shown value in biotechnological or pharmaceutical applications [7] (Fig. 1).

Fig. 1.

Sample collection and processing by a metagenomic approach (Marine environmental samples are collected from different marine sources, and the genomic DNA is extracted from the samples. The metagenomics library construction helps in the generation of DNA fragments of appropriate size and also in the ligation of the fragments followed by screening)

In reality, marine natural products’ ecology shows that many of these compounds are chemical weapons and have grown into highly potent physiological process inhibitors in prey, predators, or marine organism rivals that use them for survival. Bioprospecting will help in unraveling the enigma of the bioactive metabolites from marine microbes [8].

From the beginning of humankind, natural products have been a beneficial source as a remedy for various ailments. In worldwide, the available drugs for clinical purpose represents more than 50% are of their natural origin. The drug discovery process from natural products is still ongoing due to synthetic drugs’ side effects [9]. The crude product has a significant impact on producing new medicines that bypass infectious diseases [10].

The marine microbial species tends for conceivable biotechnological and is also an essential source of ecological maintenance. It is evident from the 16S rRNA sequencing that marine microbial species such as Bacteria and Archae have a highly diverse taxonomy [11]. Metagenomic studies have revealed that extremophile prokaryotes from marine habitats are also sources of novel genes and, consequently, new bioproducts, including enzymes and other active metabolites [12] (Fig. 2).

Fig. 2.

Sample collection and processing by culture-dependent approach (In the culture-dependent method, the microorganisms are enriched using selective media followed by biochemical characterization and taxonomical characterization.)

The extreme ecological variations in the marine habitat forced the inhabitant organisms to produce a class of tolerable hydrolase enzymes such as proteases, lipases, glycoside hydrolases, which is used in industrial processes due to their novel specificities and properties of tolerance to extreme industrial conditions. Therefore, studying and understanding these microorganisms is necessary to exploit the biochemical, ecological, evolutionary, and industrial potential [13].

Bioactivity of novel compounds from marine microorganisms

The resistance of microorganisms against antibiotics is a severe global issue. There is a need for novel chemical compounds capable of a battle against infections provoked by multidrug-resistant pathogens. The discovery of new products from natural sources is mainly essential for the development of novel antimicrobial agents. Currently, antimicrobial drugs for medical treatment derived from natural origin exhibit Actinobacteria as the most important secondary metabolite source. Carbohydrates, pigments, polyphenols, peptides, proteins, and essential fatty acids are marine bioactive compounds widely studied for various applications. These compounds have rheological effects and are found helpful in the food industry and diverse biological functions such as antioxidant, anti-thrombotic, anti-coagulant, anti-inflammatory, anti-proliferative, anti-hypertensive, anti-diabetic, and cardio-protective activities [14]. Novel bioactive compounds with extensive activities will be discussed here.

Antibacterial potential of bioactive compounds from marine microorganisms

The treatment options for some diseases like Alzheimer’s disease, Parkinson’s disease, rheumatoid arthritis (RA) and other forms of arthritis, type-1 diabetes, heart diseases, irritable bowel syndrome, allergies, asthma, cancer, and many others are limited, and certain drugs have significant side effects on patients’ health on overdose. Therefore, other alternatives that could theoretically help to manage these troublesome bacterial infections need exhaustive investigations. Since ancient times, the utility of natural products for antimicrobial therapy and other diseases has been a promising treatment [14]. The antibacterial potential of specific bioactive compounds from marine bacteria is extensively mentioned below.

Spirotetronate compounds

Maklamicin of the class polyketide is a novel spirotetronate compound isolated from the Micromonospora sp. GMKU326 in Thailand. Maklamicin exhibited potent antimicrobial activity with MIC values of 0.2, 1.7, 6.5, 13, and 13 μg/ml against Micrococcus luteus, Bacillus subtilis, Bacillus cereus, Staphylococcus aureus, and Enterococcus faecalis; on the other hand, it showed a lower activity against Candida albicans (MIC = 50 μg/ml). Maklamicin also showed a potent cancer cell cytotoxicity [15].

The Actinomadura sp. TP-A0878 is capable of producing a spirotetrone compound nomimicin of polyketide origin. Nomimicin showed potent antimicrobial activity against Micrococcus luteus, Candida albicans, and Kluyveromyces fragilis with MIC values of 6.3, 12.5, and 12.5 μg/ml [16].

Lobophorin F isolated from the Streptomyces sp. SCSIO 01127 is a novel compound possessing antibacterial and antitumor activities with MIC values of 2,8,8 μg/ml against Bacillus thuringiensis, Staphylococcus aureus, and Enterococcus faecalis [17]. The Streptomyces sp. strain MS1 00061 with provenance from the South China Sea is efficient to produce three secondary metabolites of the family lobophorin (lobophorin A, B, and G). The significant anti-BCG effect is identified with these three metabolites [18].

Ansamycin-type polyketide compounds

Novel ansamycin-type compounds isolated from Chilean Atacama Desert soil from the Streptomyces sp. strain C34 labeled as chaxamycins A–D showed potent antibacterial activity against Staphylococcus aureus ATCC25923 and Escherichia coli ATCC25922. Chaxamycins (A–C) were found to inhibit ATPase activity (41–46% of inhibition at 100 micromolar) [19].

Βeta-diketones, aromatic compounds

Streptomyces asenjonii KNN 42.f from Northern Chile produced novel bioactive compounds of the beta-diketones family. Asenjonamide C showed the highest antibacterial activity with MIC 1.8 μg/ml, 3.9 μg/ml, and 5.4 μg/ml against methicilin-sensitive Staphylococcus aureus, Enterococcus faecium, and Escherichia coli [20].

Gilvocarcin HE isolated from the Streptomyces sp. QD01-2 is termed to exhibit antimicrobial activity against Staphylococcus aureus, Bacillus subtilis, Escherichia Coli, and Candida albicans. Cytotoxic activity against the MCF-7, K562, and P388 cell lines, with IC₅₀ values of 36, 39, and 45 μM convinced that the vinyl side chain increased the cytotoxicity and antimicrobial activities [21].

Zunyimycins B and C isolated from the Streptomyces sp. FJS31-2 exhibited antimicrobial activity with MIC = 0.94 μg/ml and MICs between 3.75–8.14 μg/ml against MRSA isolates [22].

Tetracenediones

Streptomyces formicae KY5 strains can produce polyketides formicamycins A–L, efficient to inhibit MRSA with MIC 0.41 μg/ml and vancomycin-resistant Enterococcus faecium (VRE) with MIC 0.82 μg/ml [23].

Lactones

Allocyclinones produced from the Actinoallomurus sp. ID145698 exhibited antibacterial activity with MIC range of 0.25–0.5 μg/ml against Staphylococcus aureus, Streptococcus pyogenes, and Enterococcus faecalis whereas Enterococcus faecium showed MIC = 4 μg/ml. The number of substituents regulated the increase in antibacterial activity [24].

RSP 01 from the actinomycin group is a bicyclic chromopeptide lactone biosynthesized with RSP02 by the Streptomyces sp. RAB12. RSP01 with higher antimicrobial potential is possessed to have a ketocarbonyl group with MIC values of the range 0.007 to 0.06 μg/ml [25].

Quinolones

Agelas oroides, a marine sponge produced a novel chlorinated quinolone, ageloline A, which can inhibit the growth of Chlamydia trachomatis inclusion with an IC₅₀ value of 2.1 μg/ml. Ageloline A lowered the genomic damage activated by an oxidative stress inducer, 4-nitroquinoline-1-oxide [26].

Xanthones

An alluring bioactive compound buanmycin isolated from a tidal mudflat in Buan (Republic of Korea) efficient with MICs 0.42–12.5 μg/ml against Gram-positive (Staphylococcus aureus, Bacillus subtilis, Kocuria rhizophila) and Gram-negative bacteria (Salmonella enterica, Proteus hauseri) and able to obstruct Staphylococcus aureus sortase A with an IC₅₀ value of 43.2 μM [27].

Liu et al. isolated four bioactive compounds citreamicin A, citreamicin B, citreaglycon A, and dehydrocitreaglycon possessing antibacterial activity against Staphylococcus haemolyticus, Staphylococcus aureus, and Bacillus subtilis. Because of the five-member nitrogen heterocycle presence in their structure, citreamicin A and citreamicin B were more active [28].

Peptides

Kocuriapalustris F-276,345 produced a novel thiazozyl peptide kocurin (PM181104) for medication of Gram-positive bacterial infections by blocking its protein biosynthesis at the translation stage. Further studies have shown that organ and systemic infections in mice can be minimized due to kocurinin [29].

Terpenoids

Three novel meroterpenoids—napyradiomycins, analogs isolated from the Streptomyces sp. strain SCSIO 10428 (Beihai, Guangxi province, China). 3-dechloro3-bromonapyradiomycin A1 are effective against Staphylococcus aureus, Bacillus subtilis, and Bacillus thuringensis and revealed cytotoxic activity against human cancer cell lines [30].

A novel actinomadurol isolated from Actinomadura KC191 afforded a novel scaffold for antibiotic diagnosis due to its unique 19-norditerpenoid-carbon. It inhibited Bacillus subtilis, Staphylococcus aureus, Kocuria rhizophila, Proteus hauseri, Salmonella enteric with MIC values of 0.39 to 3.12 μg/ml [31].

Lipopeptides

Arylomycin A6 identified from parvus HCCB10043 exhibited antibacterial activity with the MIC of 1 μg/ml against Staphylococcus epidermidis HCCB20256 with the requirement of ultra-performance liquid chromatography coupled with tandem quadrupole and time of flight high-resolution mass spectrometry [32].

Depsipeptides

A Streptomyces sp. capable of producing ohmyungsamycins A and B containing unusual amino acid units showed inhibitory activity against Bacillus subtilis, Kocuria rhizophila, and Proteus hauseri with MICs = 1.56–49.5 μg/ml [33].

Sun et al. identified compounds active against different MRSA strains fijimycins A and C, with MICs in the range of 4–32 μg/ml from the Streptomyces sp. CNS-575 strain which belongs to the etamycin-class depsipeptides [34].

Amylolytic actinobacterium

The mangrove ecosystem, due to its varied microbial association, tends to produce unique bioactive compounds. Microbacterium mangrovi MUSC 115T, Sinomonashumi MUSC 117T, and Monashia flava MUSC 78T belonging to actinobacteria, were isolated from mangrove soils at Tanjung Lumpur, Peninsular Malaysia. The extracts Microbacterium mangrovi MUSC 115T, Sinomonashumi MUSC 117T, and Monashia flava MUSC 78T exhibited bacteriostatic effects bacteria such as Methicillin-resistant Staphylococcus aureus (MRSA) ATCC 43300, ATCC 70069, Pseudomonas aeruginosa NRBC 112582. The neuroprotective studies revealed M. mangrovi MUSC 115T extract can exhibit neuroprotective properties in oxidative stress and dementia model. The extract M. flava MUSC 78T defended SHSY5Y neuronal cells in the hypoxia model. Anti-cancer effects by the extracts M. mangrovi MUSC 115T and M. flava MUSC 78T against Ca Ski cell line make the compound more alluring [35].

Antioxidant potential of bioactive compounds from marine microorganisms

Marine sediments acquired from Chennai, Tamilnadu, India, labeled as VSKB 1 to VSKB 6 were screened out for their antibacterial and antioxidant activities in which VSKB 3 exhibited activity against Salmonella typhi and higher antioxidant activity in DPPH scavenging assay (88.32%), metal chelating assay (80.7%), and reducing power assay (0.80%) VSKB-3. Further, the isolate VSKB-3 is partially characterized by conventional methods, using the Nonomura key. It showed similar characteristics to Streptomyces bluensi and will be helpful in producing drugs against Salmonella typhi [36].

Anti-larvicidal potential of bioactive compounds from marine microorganisms

(Z)-1-((1-hydroxypenta-2,4-dien-1-yl)oxy) anthracene-9,10-dione extracted from Nocardia alba KC710971 was analyzed for its anti larvicidal activity in different concentrations against mosquito larvae Aedes aegypti, Culex quinquefasciatus, and Anopheles stephensi and also Newcastle disease virus and infectious Bursal disease virus. Similar reports were acquired by Vijayakumar et al. [37] and Subhasish Saha et al. [38, 39] in the Nocardiopsis sp. Dhanasekaran et al. identified actinomycetes strains having larvicidal activity against Anopheles mosquitoes [40]. The novel bioactive substances present in the bacteria help destroy the larvae’s cuticle layer, thereby inhibiting it [41].

Anti-inflammatory activity of bioactive compounds from marine microorganisms

Inflammation, a crucial component of host responses to multiple stimuli, including injury, microbial invasion, and immune responses, includes different biological pathways guided by external and internal stimuli. Compounds known as non-inflammatory agents may be modulated, diminished, or blocked by these biological pathways. Drugs developed from natural products are in high demand as the synthetic drugs used in treating inflammatory disorders cause adverse side effects. Novel compounds like sesquiterpenoids, diterpenes, steroids, polysaccharides, alkaloids, and fatty acids, isolated from marine organisms, are found to exhibit anti-inflammatory activity.

Polysaccharides

Marine polysaccharides including alginate, porphyran, fucoidan, chitin, and chitin derivatives, are used as down regulators of allergic responses [42]. Polysaccharides isolated from algae that are mostly sulfated exhibit anti-inflammatory activity in vitro and in vivo [43–45], which attributes to their structure and physicochemical characteristics [46].

Proteins

Marine lectins are found to have anti-inflammatory activity due to their carbohydrate-binding site [47]. Green seaweed Caulerpa cupressoides efficiently produce lectin and is administered in the left temporomandibular joint half an hour before zymosan injection. As a result, reduced zymosan-elicited arthritis and mechanical hypernociception are noticed in rats. Also, suppression in the leukocyte accumulation in synovial fluid is observed. But when treated with opioid receptor antagonist naloxone or ZnPP-IX, the activity of lectin declined. However, lectin blocked leukocyte influx and TNF-alpha and IL-1beta expression in the temporomandibular joint, proving that lectin vitiates temporomandibular joint hypernociception and inflammation depends partially on suppression of IL-1beta and TNF-alpha [48].

Enzyme inhibitors

Polymeric 3-alkylpyridinium salts composing of N-butyl (3-butylpyridinium) have been isolated from marine sponge Renierasarai. N-Butyl-3-butylpyridinium iodide, the monomer of the inhibitor, has been synthesized which acts as acetylcholinesterase inhibitors. The TLC bioautography method was carried out to assess the acetylcholinesterase inhibitory activity of the marine extracts. Extracts obtained from soft corals were more active. 14-Acetoxycrassine was determined as the bioactive compound using X-ray diffraction. Adding to this, the acetylcholinesterase inhibitory activity of 14 cembranoids has been isolated from soft corals Euniceaknighti and Pseudoplexauraflagellosa. The quantitative test, 14-acetoxycrassine and asperdiol, exhibited IC₅₀ values of 1.40–0.113 and 0.358–0.130 μM, respectively [49].

In Alzheimer’s disease, acetylcholinesterase inhibition is an important checkpoint. Acetylcholinesterase, alphaglucosidase, and xanthine oxidase inhibitory activity of 55 ethyl acetate extracts were identified in which Vibrio neocaledonicus exhibited 98.95% activity [50].

Table 1 shows the bioactive secondary metabolites isolated from marine sources, their structure, and applications in different fields.

Table 1.

Bioactive secondary metabolites from marine sources

	Secondary metabolites from marine sources
SN	Secondary metabolites	Species	Structure	Applications	Pubchem ID	Reference
	Anticancer
1	Aureoverticillactam	Streptomyces aureoverticillatus		Cytotoxicity of various cell types of tumors	9868536	[51]
2	Caprolactones	Streptomyces sp.		Activity against cancer cell lines	10401	[52]
3	Chinikomycins	Streptomyces sp.		Antitumor action against different cancer cell lines in humans	11273076	[53]
4	IB-00208	Actinomadura sp.		Cytotoxic activity on tumor cell lines and bactericidal activity against Gram-positive bacteria	139583280	[54]
5	Salinosporamide A (NPI-0052)	Salinisporatropica		Cytotoxicity, inhibition of the proteosome and inhibition of the activation of NF-κB	11347535	[55]
6	Urdamycin	Streptomyces fradiae		Contains biomolecules of aminoglycoside and strong antibacterial and anti-cancer activity	443819	[56]
7	Himastatin	Streptomyces hygroscopicus		Includes valine, leucine, threonine, α-hydroxyisovaleric acid, 5-hydroxypiperazic acid, and a dimeric hexahydropyrroloindole.	9855348	[57]
8	Daryamide D	Streptomyces strain CNQ-085		Cytotoxic activity against cell line HCT-116 of human colon carcinoma and antifungal activity against Candida albicans	132609319	[58]
9	Marinomycin	Marinispora sp. strain CNQ-140		Inhibition of cancer cell proliferation		[59]
10	Manumycin	Streptomyces sp. M045		Antitumor activity against different human cancer cell lines	6438330	[53]
11	Marmycin	Streptomyces sp.		Cytotoxicity of tumor cells tended to correlate with moderate apoptosis induction and arrest during the G1 cell cycle process	91801297	[60]
12	Nonactin	Streptomyces tsukubaensis, Streptomyces griseus, Streptomyces chrysomallus, and Streptomyces werraensis.		Vigorous antineoplastic and antibacterial activity	72519	[61]
13	Chartreusin	Streptomyces chartreusis		Active against certain gram-positive bacteria	5281394	[62]
14	Altemicidin	Streptomyces sioyaensis SA-1758.		Acaricidal activity and antitumor activity	11036174	[63]
15	Streptochlorin	Streptomyces sp.		Promising chemotherapeutic agent to the treatment of cholangiocarcinoma	44608049	[64]
16	Marineosins	Streptomyces sp.		Significant inhibition of human colon carcinoma	135960042	[65]
17	Ammosamides	Streptomyces variabilis		Cytotoxicity to the MIA PaCa-2 pancreatic cancer cell line	25113669	[66]
18	Caboxamycin	Streptomyces sp. NTK 937		Inhibitory activity against Gram-positive bacteria, selected human tumor cell lines and the enzyme phosphodiesterase	135957253	[67]
19	Hoiamide D	Symploca sp		screening inhibitory activity in contrast to 53/Mdm2 interaction	56835050	[68]
20	Niphateolide	Niphates olemda		p53-Hdm2/Mdm2 interaction inhibitor	132989992	[69]
21	Hexylitaconic acid	Arthrinium sp		blocks p53/Mdm2 binding	11447214	[70]
22	Lissoclinidine B	Lissoclinum cf. badium		kills altered cells with wild-type p53	25147779	[71]
23	Himeic acid A	Aspergillus sp.		Ubiquitin-Activating Enzyme (E1) inhibitory action	11774903	[72]
24	Girolline	Cymbastela cantharell and Axinella brevistyla		initiating G2/M cell cycle arrest in cancer cells	362388	[73]
25	Leucettamol A	Leucetta aff. microrhaphis		inhibits the ubiquitin E2 enzymes Ubc13 and Uev1A by 50%	6271251	[74]
26	Dysidiolide	Dysidea etheria		capable of inhibiting Cdc25 protein phosphatase	11269661	[75]
27	Sulfircin	Ircinia sp		inhibit Cdc25 phosphatase	44381469	[76]
28	Coscinosulfate	Coscinoderma mathewsi		inhibitory activity towards Cdc25A	102305354	[77]
29	Halenaquinone	Xestospongia carbonaria		irreversible inhibitor of recombinant human Cdc25B phosphates	370346	[78]
30	Secalonic acid D	Penicillium oxalicum		slow the course of the cell cycle in human embryonic palatal mesenchymal cells	73431	[79]
31	Stellettin B	Jaspis stellifera		decrease in Cdk and an increase in p27 expression	5352082	[80]
	Antibacterial
32	Abyssomicins	Verrucosispora sp.		Inhibits the pathway between chorismate and para-aminobenzoic acid	12094197	[81]
33	Frigocyclinone	Streptomyces griseus		Lead molecule against Kaposi’s Sarcoma Associated Herpesvirus KSHV	11476774	[82]
34	Gutingimycin	Streptomyces sp.		Antibacterial antifungal and antimicroalgal activities	136835719	[83]
35	Helquinoline	Janibacterlimosus		Antibacterial antifungal and antimicroalgal activities	10466080	[84]
36	Himalomycins	Streptomyces sp.		Antimicrobial activity against Gram-positive bacteria	11765992	[85]
37	Lajollamycin	Streptomyces nodosus		Antimicrobial activity against drug-sensitive and -resistant Gram-positive bacteria and inhibited the growth of B16-F10 tumor cells in vitro	139587457	[32]
38	Tylosin	Streptomyces fradiae		Potential for the treatment of respiratory and other infections caused by Mycoplasma species		[86]
39	Maklamicin	Micromonospora sp. GMKU326		Antimicrobial activity against Gram-positive bacteria	101796870	[87]
40	Lobophorin K	Streptomyces sp. M-207		Antibiotic activity against pathogenic Gram-positive bacteria	139590476	[88]
41	Asenjonamide C	Streptomyces asenjonii strain KNN 42		Antimicrobial activity against Gram-positive bacteria	139589509	[20]
42	Gilvocarcin HE	Streptomyces sp.		More significant cytotoxicity and antimicrobial activity due to the vinyl side chain	102439806	[21]
43	Zunyimycins	Streptomyces sp. FJS31-2		Inhibits the proliferation of lung cancer cells by the activation of apoptosis by an AKT pathway		[22]
44	Formicamycins A	Streptomyces formicae		Potent antibacterial activity against clinical MRSA and VRE isolates		[23]
45	Allocyclinones	Actinoallomurus		Possess activity against various Gram-positive bacteria, including antibiotic-resistant strains, with increasing antibacterial potency with the number of chlorine substitutes		[24]
46	Ageloline A	Streptomyces sp. SBT345		Able to reduce oxidative stress and genomic damage induced by the oxidative stress inducer 4-nitroquinoline-1-oxide (NQO)	1884	[26]
47	Buanmycin	Streptomyces sp		Inhibition of sortase A, which is a promising target for antibiotic Discovery		[89]
48	Citreamicin	Streptomyces caelestis		Citreamicins exhibit cytotoxic activity against HeLa and Hep62 cells in addition to their potent antibiotic activity	3083114	[28]
49	Kocurin	Kocuria sp. strain MI-67-EC3-038		Kocurin is active against methicillin-resistant Staphylococcus aureus (MRSA)		[29]
50	Fijimycins	Streptomyces sp.		Possess significant in vitro antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA) strains		[86]
51	Arylomycin	Streptomyces sp. HCCB10043		Inhibits a promising antimicrobial target, type I signal peptidase (SPase)		[90]
	Antibacterial; anticancer
	1-Hydroxy-1-Norresistomycin	Streptomyces variabilis		Potent cytotoxic activity against cell lines viz. HMO2 (gastric adenocarcinoma) and HePG2 (hepatic carcinoma) in vitro		[91]
	Antibacterial; antifungal
52	Bonactin	Streptomyces sp.		Bonactin displayed antimicrobial activity against both Gram-positive and Gram-negative bacteria as well as antifungal activity	11741721
	Anti-inflammatory
53	Diazepinomicin (ECO-4601)	Micromonosproa sp.		Preclinical broad-spectrum antitumor potential, antioxidant and anti-protease activities.	9868980	[92]
54	Cyclomarins	Streptomyces sp.		Interesting lead structures for the development of drugs against tuberculosis and malaria		[93]
	Neurogenic activity
55	Komodoquinone A	Streptomyces sp. KS3		Induces differentiation of neuronal cells in the neuroblastoma cell line, Neuro 2A and arrests the cell cycle in step G1	11756746	[94]
56	Granaticins	Streptomyces lateritius		Granaticinhas significant antitumor activity against P-388 lymphocytic leukemia in mice and cytotoxicity against KB cells.		[95]
57	Hymenialdisine	Agelasidae, Axinellidae, and Halichondriidae		suppresses many pro inflammatory cytokines (IL-1, IL-2, IL-6, and NO) by inhibition of NF-kB signaling pathway	135413546	[96]
	Antifungal
58	Amphotericin B	Streptomyces nodosus		Treatment of most systemic fungal infections	91819969
	Anti tuberculosis
59	Rifampicin	-		Rifampicin had immunomodulatory effects through its ability to modify human monocyte production of measured cytokines		[97]
60	Streptomycin	-		Antibiotic activity against gram-positive and gram- negative bacteria	19649	[97]
61	Amikacin	-		Potent activity against Antibiotic-Resistant Clinical Isolates	37768	[97]
62	Viomycin	-		Tuberculostatic agent active against both streptomycin – sensitive nad streptomycin – resistant strains	135565959	[97]
63	Capreomycin	-		Bactericidal in vitro among the anti-TB drugs against non-replicating tubercle bacilli	135565060	[97]
64	Kanamycin	-		Kanamycin intramuscular administration had a satisfactory effect in mice with staphylococci, pneumococci, and Ulebsiella pneumonia infections	6032	[97]
65	Cycloserine	-		Antituberculous activity invitro and invivo	6234	[97]

Leading secondary metabolites from marine sources and their role against various diseases

Against tuberculosis

Tuberculosis is the greatest threat around the globe. However, there are anti-tuberculosis (anti-TB) medicines, which lowered the fatality drug-resistant forms. Nevertheless, of the clinical drugs, biodiverse marine microorganisms have been identified as a drug source in treating tuberculosis. Nearly 170 compounds isolated from marine sources tended to exhibit anti-TB properties. The current anti-TB agents rifampicin, streptomycin, amikacin, viomycin, capreomycin, kanamycin, and cycloserine possess in vitro activity against Mycobacterium tuberculosis with MICs of 0.2, 0.5, 1.0, 4.0, 5.0, and 6.0 μg/mL, respectively [97]. The initial MIC value should be less than 64 μg/mL to identify potential anti-TB compounds, or the growth inhibition should be more significant than 75% at 12.5 μg/mL [98, 99]. Additionally, a selectivity index (SI, IC₅₀/MIC) more significant than 10 has been used as a benchmark to screen anti-TB compounds that can further develop [98, 99]. With their unique aquatic environment and rich biodiversity, the oceans have proven to be a plentiful source of diverse natural products with significant antimicrobial, antiviral, antimalarial, antitumor anti-inflammatory, and antioxidant activities [100].

Neurodegenerative diseases

Neurodegenerative disorders are characterized by mitochondrial dysfunction and reactive production of oxygen species (ROS), among cellular pathologies, thereby related to oxidative stress. The central nervous system is peculiarly sensitive to free radical damage due to its high oxygen consumption ratio, rich content of phospholipids, and high levels of iron, which can catalyze oxidative reactions and contribute to an increase in the production of free radicals. This is coupled with a low content of antioxidant defenses in the brain that is even more altered in Neurodegenerative disease.

Secondary metabolites preventing oxidative stress

Oxidative stress is a frequent checkpoint in neurodegenerative diseases, widely associated with mitochondria. These two compounds, glutathione and catalase, displayed complete protection against oxidative stress with mitochondrial function improvement, ROS production inhibition, and antioxidant enzyme levels. Further studies have reported that anhydroexfoliamycin acts as an inducer of Nrf2 nuclear translocation over the Nrf2-ARE pathway and can significantly inhibit the uncoupler’s mitochondrial effect FCCP over cytosolic Ca2+, pointing mitochondria as a cellular target for this molecule. Also, both compounds were able to reduce the caspase-3 activity induced by staurosporine, an apoptotic enhancer. These show that Streptomyces metabolites could help develop new drugs to prevent neurodegenerative disorders such as Parkinson’s and Alzheimer’s diseases and cerebral ischemia [101].

The Streptomyces sp. UTMC 1334 is considered a potential anti-acetylcholinesterasic sources with an IC₅₀ value of 0.36 ± 0.02 μg/mL, since extracts with an IC₅₀ value lower than 1.0 μg/mL were considered strong anti-acetylcholinesterasic [102, 103]. The Streptomyces sp. UTMC 1334 is taxonomically identified as Streptomyces lateritius (99.41%). This is the first report of marine-isolated Streptomyces lateritius producing metabolites with AChE inhibitory activity. Six antibiotics of the granaticin group have been isolated from Streptomyces lateritius so far. The Granaticins are a well-documented series of quinone antibiotics and are reported to have antibacterial, antitumor, and anti-protozoal activities [104, 105].

Granaticin B is highly active against Staphylococcus aureus with a MIC range from 0.9 to 3.6 μmol/l. Effective inhibition of biofilm formation against Staphylococcus aureus is also reported [95]. Streptocyclinones A and B, isolated from the Streptomyces sp. to improve AD hallmarks, were evaluated. Compounds were able to protect SH-SY5Y neuroblastoma cells from H₂O₂-induced oxidative injury by activating the nuclear factor E2-related factor (Nrf2) [106].

Alzheimer’s disease

Alzheimer’s disease (AD) is a slow and progressive degeneration with synaptic loss and final neuronal death. The impairments are located in specific brain regions engaged in learning and memory processes. The indication of this disorder is the presence of senile plaques and neurofibrillary tangles (NFTs). These senile plaques are extracellular aggregates of amyloid-beta protein produced by the incorrect cleavage of the amyloid precursor protein (APP), and NFTs are intracellular accumulations of abnormal hyperphosphorylated tau proteins. Many hypotheses illustrate these mechanisms, the most accepted of which is the amyloid cascade hypothesis that proposes the abnormal amyloid is processed by beta and gamma secretases and as the main event of AD [107] (Fig. 3).

Fig. 3.

Pathological hallmarks of Alzheimer’s disease

Although amyloid and tau approaches have been widely adopted and currently are the most studied ones, oxidative stress-based strategies have also been tried, using two different routes: through exogenous antioxidants or by the induction of endogenous antioxidant defenses through the nuclear factor erythroid 2-related factor 2 (Nrf2) [107].

Hymenialdisine belongs to a novel class of CDK inhibitors isolated from Agelasidae, Axinellidae, and Halichondriidae families of marine sponges. The CDK inhibitory efficacy of HD is understood by observing its binding interactions in the CDK2–HD crystal structure. In vivo phosphorylation of particular neuronal proteins by GSK-3 and CDK5 is inhibited by HD. It inhibits the phosphorylation of tau, which is indicative of Alzheimer’s disease. HD could be a lead chemical for analyzing the role of tau hyperphosphorylation in neurodegenerative diseases and specific inhibitors of kinases involved in AD and other degenerative disorders. Several models were used to demonstrate the effects of HD on kinases in vivo. These findings motivated researchers to look into HD as a potential treatment for neurodegenerative diseases [96]. Hymenialdisine also suppresses many pro-inflammatory cytokines (IL-1, IL-2, IL-6, and NO) by inhibition of the NF-kB signaling pathway, which could be useful in the treatment of inflammatory diseases [108].

Parkinson’s disease

Parkinson’s disease (PD) is a neurodegenerative disorder caused by the loss of dopaminergic neurons, leading to patients’ motor dysfunctions. Although PD’s etiology is still unclear, the death of dopaminergic neurons during PD progress was revealed to be associated with the abnormal aggregation of synuclein, the elevation of oxidative stress, the dysfunction of mitochondrial functions, and the increase of neuroinflammation. However, current anti-PD therapies could only produce symptom-relieving effects because they could not provide neuroprotective effects and stop or delay dopaminergic neuron degeneration. Marine-derived natural compounds, with their novel chemical structures and unique biological activities, may provide anti-PD neuroprotective effects [109].

Secondary metabolites from marine-derived bacteria represent a rich source for drug development with novel chemical structures and diverse biological activities [110, 111]. NP7 is a marine-derived compound from the Streptomyces sp. NP7 is an antioxidant and can pass the blood-brain barrier. NP7 at 5–10M is capable of preventing apoptosis and necrosis induced by H₂O₂ in neurons and glial cells [112]. Also, NP7 can inhibit microglial activation and prevent the increased phosphorylation of ERK induced by H₂O₂. Therefore, NP7 can act as a neuroprotective agent against oxidative stress in PD [113].

The inhibitory activity of marine-derived compounds piloquinones, isolated from the Streptomyces sp., on MAO-B was reported by Takeuchi et al. [114]. Piloquinone A and piloquinone B were isolated from the Streptomyces sp. CNQ-027 [115] among which piloquinone (A) is a potent inhibitor of MAO, with an IC₅₀ value of 1.21 M for MAO-B and an IC₅₀ value of 6.47 M for MAO-A. Simultaneously, piloquinone (B) is only effective against MAO-B, with an IC₅₀ value of 14.50 M (63). These results indicated that piloquinone derivatives may be useful lead compounds in the development of MAO-B inhibitors to treat PD.

Autoimmune diseases

The autoimmune disease includes rheumatoid arthritis (RA) and other forms of arthritis, type-1 diabetes, heart diseases, irritable bowel syndrome, allergies, asthma, cancer, and many others. Over the past few decades, it was realized that the process of inflammation is virtually the same in different disorders, and a better understanding of inflammation may lead to better treatments for numerous diseases. Inflammation is the activation of the immune system in response to infection, irritation, or injury, with an influx of white blood cells, redness, heat, swelling, pain, and dysfunction of the organs involved. Although these conditions’ pathophysiological basis is not fully understood, reactive oxygen species (ROS) have often been implicated in their pathogenesis. In fact, the antioxidant defense system is compromised in inflammatory diseases, as evidenced by increased oxidative stress markers and decreased protective antioxidant enzymes in patients with rheumatoid arthritis (RA).

Secondary metabolites from the Actinomycetes sp. for inflammatory diseases

Cyclomarins are three cyclic heptapeptides (A, B, and C), isolated from the marine bacterium actinomycete, belonging to the Streptomyces sp., along the Californian coast. Marine actinomycetes have been exploited as a source of biologically active secondary metabolites with antibacterial and anti-cancer properties [93]. Some molecules have also been reported to be anti-inflammatory, such as cyclomarins and salinamides [116]. Cyclomarin A, constituted of three common and four unusual amino acids, showed potent anti-inflammatory and anti-proliferative activities in in vivo and in vitro assays, managing to inhibit edema pain similar to the drug hydrocortisone [117]. A moderate anti-inflammatory effect has also been reported in cyclomarin C, whose total synthesis was recently experimented and reported [118]. That is why both cyclomarin A and C and their derivatives can act as potent anti-inflammatory therapies naturally.

These five peptides (A, B, C, D, and E) were isolated, like cyclomarin, from marine actinomycetes, belonging to the Streptomyces sp., isolated from the surface of the jellyfish Cassiopeaxamachana, found in Florida waters [116]. Salinamides A and B are the two primary bicyclic metabolites, with potent topical anti-inflammatory activity and moderate antibiotic activity against gram-positive bacteria, and could be used to treat tissue inflammation and some infections [119].

Spectral and chemical techniques are useful to construct minor metabolites, Salinamides C, D, and E. In salinamide D, a similar structure is observed with isoleucine replaced by valine. Light anti-inflammatory activity is identified in salinamides C and E, thus potentially able to combat inflammatory disease.

Different types of cancer

Chemotherapy is one of the primary therapies against cancer. A significant number of antitumor compounds are natural products or their derivatives, mainly produced by microorganisms. In particular, actinomycetes are the producers of many natural products with different biological activities, including antitumor properties. Several structural classes of antitumor compounds include anthracyclines, enediynes, indolocarbazoles, isoprenoids, macrolides, non-ribosomal peptides, etc. These compounds’ antitumor activity is exerted by inducing apoptosis through DNA cleavage mediated by topoisomerase I or II inhibition, mitochondria permeabilization, and inhibition of key enzymes involved in signal transduction like proteases or cellular metabolism and some cases by inhibiting tumor-induced angiogenesis. Marine organisms have attracted particular attention in the last years for their ability to produce interesting pharmacological lead compounds [120] (Fig. 4).

Fig. 4.

Anti-cancer potential of bioactive compounds from marine source

Many of the antitumor compounds from marine drugs result from marine actinobacteria, and these metabolites show a crucial part in the proof of identity of the pharmaceutical compound. Presently, it seems that there have been only a few studies concentrating on finding therapeutic compounds obtained from marine actinobacteria to be used as anti-cancer agents, as well as anti-infective. Some antitumor compounds from marine sources and their role in different types of cancer are discussed below.

Human colon cancer

A high number of type I polyketide-derived compounds with antitumor activity have been isolated from marine actinomycetes. Such is the case of arenicolides, 26-membered polyunsaturated macrolactones, produced by the obligate marine actinomycete Salinisporaarenicola strain CNR-005 isolated from a marine sediment sample collected at a depth of 20 m from the coastal water around the island of Guam.

Daryamides also belong to the manumycin family of compounds. They were isolated from Streptomyces strain CNQ-085 obtained from marine sediment collected at a depth of 50 m off the San Diego coast, California. Daryamides A to C and (2E,4E)-7-methylocta-2,4-dienoic acid amide are subjected to cytotoxicity evaluation against the human colon carcinoma cell line HCT-116, showing that daryamide A exhibited significantly more potent cancer cell cytotoxicity, with an IC₅₀ of 3.15 μg/mL than daryamides B and C [58].

Marineosins, related to the prodigiosin class of polypyrrole bacterial pigments, are spiroaminal compounds containing two pyrrole functionalities produced by Streptomyces strain CNQ- 617 isolated from a marine sediment sample collected offshore of La Jolla, California. Marineosins showed significant inhibition of human colon carcinoma HCT-116 cell line with IC₅₀ values of 0.5 μM for marineosin A and 46 micromolar for marineosin B [121].

Human cervical cancer

Chalcomycin, a 16-membered macrolide, is produced by the Streptomyces sp. M491 isolated from the Qingdao coast (China) [122]. Besides, chalcomycin and the related compound chalcomycin B have been isolated from Streptomyces strain B7064 found in mangrove sediments in Hawaii [123]. Chalcomycin is found to inhibit protein synthesis in HeLa human cervix carcinoma cell line [124].

Human skin cancer

Human rare macrodiolides composed of dimeric 2-hydroxy-6-alkenyl-benzoic acid lactones with conjugated tetraene-pentahydroxy polyketide chains, produced by the Marinispora sp. CNQ-140 was isolated from a sediment sample collected at a depth of 56 m offshore of La Jolla, California. These compounds inhibit cancer cell proliferation with an average LC50 of 0.2-2.7 μM against the NCI’s 60 cancer cell line panel. Marinomycin A showed significant tissue type selectivity being more active against human melanoma cell lines LOX IMVI, M14, SK-MEL-2, SK-MEL-5, UACC-257, and UACC-62 skin cancer [120].

Mammary cancer

Manumycin A and chinikomycins A and B (the quinone form of chinikomycin A) were isolated from the Streptomyces sp. M045 is derived from the sediment of Jiaozhou Bay in China. Chinikomycins A and B showed moderate antitumor activity. Chinikomycin B showed selective antitumor activity against the mammary cancer cell line MAXF 401NL (IC₅₀ of 3.04 μg/mL) [53]. Isolated from the culture broth of Streptomyces strain CNH990 isolated from a sediment sample collected at a depth of 20 m at the entrance to the Sea of Cortez, 5 km east of Cabo San Lucas, Mexico [60]. In cytotoxic assays using the human cell line of colon adenocarcinoma HCT-116, marmycin A showed an IC₅₀ of 60.5 nM, almost 18 times more potent than marmycin B, which showed an IC₅₀ of 1.09 μM. Marmycin A is further evaluated for its in vitro cytotoxicity offering a mean IC₅₀ value of 0.022 μM against 12 human tumor cell lines (breast, prostate, colon, lung, leukemia).

Blood cancer

Nonactin, a cyclic polyether, also known as macrotetrolide, is isolated from cultures of the Streptomyces sp. KORDI-3238 from a deep-sea sediment sample collected at Ayu Trough in the western Pacific Ocean [125]. The biosynthesis gene cluster of nonactin has previously isolated and characterized from S. griseus DSM40695 [61], revealing that it is synthesized by a non-iteratively acting type II PKS that involves five ketosynthases and lacks the acyl carrier protein. Nonactin is an effective inhibitor against the human K-562 erythroleukemia cell line [126].

Chartreusin is an aromatic glycosylated polyketide, currently in phase II clinical trials [62], that possesses an unusual bislactone synthesized through anthracycline intermediates that might undergo a series of oxidative rearrangements to generate the final bislactone structure. This particular biosynthetic process is unraveled by the isolation of the chartreusin biosynthesis gene cluster from S. chartreusis [127]. Chartreusin shows antitumor activity by binding to DNA, radical-mediated single-strand breaks, and inhibition of topoisomerase II [128].

It possessed significant chemotherapeutic activity against various tumor cell lines such as murine P388 and L1210 leukemia and was identified from Streptomyces sp cultures. FX-58, isolated from marine plant Salicorniaherbacea collected in Qingdao, Shandong province, China, showed an inhibitory effect against human tumor cell lines of pro-myelocytic leukemia HL-60, gastric carcinoma BGC-823, and adenocarcinoma MDA-MB-435 with IC₅₀ of 6.83, 82.2, and 56.59 μg/mL, respectively.

Altemicidin with a monoterpene-alkaloid skeleton is produced by Streptomyces sioyaensis SA-1758 isolated from sea mud collected at Gamo, Miyagi Prefecture, Japan. This compound inhibited the growth of murine lymphoid leukemia L1210 and carcinoma IMC cell lines with IC₅₀ values of 0.84 and 0.82 μg/mL, respectively, although it showed high acute toxicity in mice [63].

Streptochlorin is a 3-substituted indole compound with antiangiogenic and anti-cancer activities produced by Streptomyces strain 04DH110 isolated from shallow water sediment taken at 1 m depth of Ayajin Bay, on the East Sea of Korea. Streptochlorin exhibited significant in vitro growth inhibitory activity against human leukemia K-562 cells with an IC₅₀ of 1.05 μg/mL [64].

Prostate cancer

Ammosamides are pyrroloiminoquinone compounds produced by Streptomyces strain CNR-698 isolated from bottom sediments collected at a depth of 1618 m in the Bahamas Islands. Ammosamide A and B exhibited significant in vitro cytotoxicity against human colon adenocarcinoma HCT-116 cells with an IC₅₀ of 320 nM each [129].

Hepatic cancer

Caboxamycin is a benzoxazole compound produced by the Streptomyces sp. NTK 937 was isolated from an Atlantic Ocean deep sea sediment collected in the Canary Basin. It was tested against different tumor cell lines and showed moderate growth inhibitory activity towards human gastric adenocarcimona AGS, hepatocellular carcinoma Hep G2, and breast carcinoma MCF7 cell lines with GI50 7.5, 7.4, and 7.3 μg/mL, respectively [67].

Compounds of the prodigiosin family, isolated from the Saccharopolyspora sp. nov. from sponge Mycale plumose, were collected along the coast of Qingdao, China [130]. The compounds identified as metacycloprodigiosin and undecylprodigiosin [131] exhibited significant cytotoxic activities in vitro, as it is recently described for prodigiosin family of compounds [132], against five cancer cell lines: mouse lymphoma P388, human peripheral blood promyeloblast HL60, lung carcinoma A-549 and SPCA4, and hepatic carcinoma BEL-7402 with IC₅₀ values between 0.007 and 7.52 μM for metacycloprodigiosin and 0.013 to 0.11 μM for undecylprodigiosin [130].

Marine-derived inhibitors with anticancer activity

A neurotoxic lipoprotein Hoiamide A was isolated from cyanobacterial extracts of the Papua New Guinea cyanobacterium Symploca sp. screening inhibitory activity in contrast to 53/Mdm2 interaction (EC₅₀ = 4.5 μM) [68, 133]. Niphateolide, a diterpene isolated from the Indonesian sea sponge Niphates olemda, is a p53-Hdm2/Mdm2 interaction inhibitor [69]. The marine Actinomycete Verrucosispora produces proximicins A, B, and C, which are furan equivalents of netropsin. These support in inducing upregulation of p53 and the cyclin-dependent kinase inhibitor p21 [134]. The Arthrinium sp., a marine-derived fungus, was used to isolate hexylitaconic acid. With an IC₅₀ of 50 g/mL, it blocked p53/Mdm2 binding [70]. Lissoclinidine B was extracted from Lissoclinum cf. badium, a cancer-fighting chemical that selectively kills altered cells with wild-type p53 [71].

Anti-mycin analogs from the marine Streptomyces sp., N-acetyl-deformylantimycin A (NADA) exhibited an effective way to suppress Hela cells [135]. Himeic acid A is isolated from marine fungus Aspergillus sp. exhibited ubiquitin-activating enzyme (E1) inhibitory action at 100 μM [72]. Polyubiquitinated p53 is accumulated in Girolline, a marine sponge isolated from Cymbastela cantharell and Axinella brevistyla initiating G2/M cell cycle arrest in cancer cells [73]. Leucettamol A isolated from the Leucetta aff. microrhaphis sea sponge, at 50 μg/ml, inhibits the ubiquitin E2 enzymes Ubc13 and Uev1A by 50% [74].

Dysidiolide is a novel alkyl-hydroxybutenolide diterpene derived from the Bahamas sponge Dysidea etheria capable of inhibiting Cdc25 protein phosphatase, causing the G2/M transition of the cell cycle to be delayed by dephosphorylating the p34cdc2/cyclin B complex at Tyr15 and Thr14 residues [75]. Sulfircin, a sesquiterpene sulfate extracted from a marine sponge Ircinia sp., had an IC₅₀ of 7.8 μM for inhibiting Cdc25 phosphatase [76]. Coscinosulfate is a sesquiterpene sulfate obtained from the new Caledonian sponge Coscinoderma mathewsi having significant inhibitory activity towards Cdc25A (IC₅₀ = 3μM) [77]. The Fijian sponge Xestospongia carbonaria produced halenaquinone, a pentacyclic polykeyide molecule that works as an irreversible inhibitor of recombinant human Cdc25B phosphates (activator of cyclin-dependent kinase Cdc2), which prevents the cell cycle from progressing to the mitotic phase. With an IC₅₀ value of 19 μM, this drug displayed an inhibitory effect against the kinase activity of human EGFR [78].

SAD is a mycotoxin that is isolated from Penicillium oxalicum. DNA topoisomerase I is inhibited by SAD (MIC = 0.4 μM) and also inhibited the G1 phase of the cell cycle in the GSK-3/-catenin/c-MYC pathway, resulting in considerable cytotoxic action against different cancer cells. SAD slowed the course of the cell cycle in human embryonic palatal mesenchymal cells, preventing them from proliferating [79, 136].

The triterpene Stellettin B was isolated from the sea sponge Jaspis stellifera. At a dose of 0.01 μM, this chemical inhibits the development of the glioblastoma cell line SF295 by 50%. Stettettin B's mitotic G1 phase arrest resulted in a decrease in Cdk and an increase in p27 expression. The cleavage of Poly ADP Ribose Polymerase (PARP) and an increase in ROS generation may be linked to apoptosis induction [80].

Phidianidine A is an indole alkaloid isolated from the marine opisthobranch mollusk Phidiana military capable of inhibiting CXCL12-induced DNA synthesis, cell migration, and ERK1/2 activation [137, 138]. Fucoidan is a sulfated polysaccharide isolated from brown seaweeds that contains fucose. Fucoidan crude extracts bind CXCL12 and inhibit lung metastasis and tumor growth in 4T1 breast cancer cells [139]. JG6 is a new marine-derived oligosaccharide that has been demonstrated to reduce angiogenesis and tumor metastasis by inhibiting CXCL12/CXCR4 [140].

Drugs derived from marine sources under clinical trials

Phase III

Plitidepsin is a cyclic depsipeptide isolated from a Mediterranean marine tunicate (Aplidium albicans) and is structurally linked to didemnins, some of which exhibit antiviral effects [141, 142].

Plitidepsin exhibited high antiviral effectiveness and a favorable therapeutic index in invitro models of SARS-CoV-2 infection, outperforming other medicines, including remdesivir, preclinical trials. Notably, plitidepsin has a similar in vitro antiviral impact against the B.1.1.7 variety of SARS-CoV-2, which is known to have multiple mutations altering the viral spike protein, which aids viral entry by interacting with the human ACE2 receptor [143].

Tetrodotoxin (TTX) is a neurotoxin that is primarily present in puffer fish and other marine and terrestrial species. TTX inhibits voltage-gated sodium channels (VGSCs). Some TTX-sensitive VGSCs are extensively expressed by main sensory neurons, and they play a significant role in pain signaling. TTX is now being tested in clinical trials for neuropathic pain caused by chemotherapy and cancer-related pain. Tetrodotoxin has been studied in both preclinical and clinical settings to treat pain caused by neuropathies or cancer and has shown efficacy and a favorable safety profile [144].

Phase II

GTS-21 is active in a variety of animal models that are commonly used to study memory and learning. In various in vitro and in vivo investigations, GTS-21 was beneficial in boosting cell survival. GTS-21 is being developed for the treatment of both cognitive dysfunction and neurodegeneration exhibited in Alzheimer’s patients based on its preclinical characteristics. GTS-21 was well tolerated up to 450 mg/day (150 mg t.i.d.) in normal people and showed improvements in cognitive behavior. GTS-21 could be a novel dementia medication, and it should be studied further for its potential therapeutic effects in several disorders affecting cognitive function, including Alzheimer’s disease [145].

Irvalec® (elisidepsin trifluoroacetate, PM02734) is a new marine-derived cyclic peptide from the Kahaladide family in clinical trials with preliminary anticancer efficacy. Previous research has found a link between elisidepsin sensitivity and ErbB3 receptor expression in a panel of NSCLC cell lines [146].

Elisidepsin, in combination with CDDP, TAX, or gemcitabine, could be an effective and viable therapeutic approach that could be tested in several in vivo investigations and give a basis for further development of these combinational treatments in clinical trials in the future. In several cell lines, elisidepsin combined with any of the chemotherapeutic drugs had a synergistic impact. Elisidepsin treatment could influence cells on the lipidic bilayer membrane, which are more likely to possess high numbers of ErbB3 receptors, enhancing the activity of the various medications examined (CDDP, TAX, or gemcitabine). In this regard, cancers with overexpression of ErbB3, such as metastatic breast or lung tumors, could be suitable candidates for these types of combinational trials [147].

Phase II

Pseudopterosins and seco-pseudopterosins were isolated from the octocoral Pseudopterogorgia elisabethae of the San Andrés and Providencia islands (southwest Caribbean Sea), and the antimicrobial profile against four pathogenic microorganisms (Staphylococcus aureus, Enterococcus faecalis, Pseudomonas aeruginosa, and Candida albicans), as well as a more comprehensive cytotoxic profile against five human cell lines (HeLa, PC-3, HCT116, MCF-7, and BJ) for the compounds PsG, PsP, PsQ, PsS, PsT, PsU, 3-O-acetyl-PsU, seco-PsJ, seco-PsK, and IMNGD were assessed. All of the compounds tested had moderate and non-selective cytotoxic activity against both tumor and normal cell lines, with PsQ and PsG being the most active (GI50 values ranging from 5.8 to 12.0 M). In terms of antimicrobial action, the compounds were shown to have good and selective activity against Gram-positive bacteria, but no activity against Gram-negative bacteria or yeast. PsU, PsQ, PsS, seco-PsK, and PsG were the most active compounds against S. aureus (IC₅₀ 2.9–4.5 M), and PsG, PsU, and seco-PsK exhibited good activity against E. faecalis (IC₅₀ 3.1–3.8 M), equivalent to the reference medication vancomycin (4.2 M) [148].

Pseudopterosin H was discovered in the Pseudopterogorgia elisabethae marine coral. In vitro screening with the MTT, NBT, and LDH assays, as well as AO/EB fluorescence, was used to examine the therapeutic efficiency of pseudopterosin H on the PC-3 cell line at varying concentrations. Results show that treatment with pseudopterosin H reduces PC-3 cell viability by inducing apoptosis and downregulating the production of intracellular reactive oxygen species. The chemosensitivity of PC-3 cells to pseudopterosin H therapy implies that it could be used as a preventative and therapeutic treatment for metastatic castration-resistant prostate cancer. PsH lowers PC-3 cell viability by causing apoptosis and lowering ROS levels. PsH may directly impact prooxidant enzyme function or indirectly block the pro-inflammatory pathway, NF, resulting in a reduction in ROS. PsH has pharmacological properties that could be beneficial in the treatment of prostate cancer [149].

Bryostatin 1, a marine-derived natural compound, showed procognitive and antidepressant benefits in animals and is currently being tested in human clinical studies for the treatment of Alzheimer’s disease (AD). The effects of bryostatin 1 on the structure and function of hippocampus neurons have been related to its potential to improve learning and memory.

Calvin et al. showed that bryostatin 1 promotes cortical synaptogenesis while lowering dendritic spine density in a protein kinase C (PKC)-dependent manner using a combination of chemical probes and pharmacological inhibitors. Compounds that increase synaptic density while also causing the loss of immature dendritic spines could be a novel pharmaceutical technique for boosting memory by raising the signal-to-noise ratio in the brain [150].

Tissue factor (TF) is a possible target in cervical cancer due to its high expression and link to a poor prognosis. In solid tumors, tisotumab vedotin, a first-in-class experimental antibody–drug combination targeting TF, has shown promising action. Patients with recurrent or metastatic cervical cancer were given tisotumab vedotin 2.0 mg/kg every 3 weeks until their disease progressed, toxicity became unacceptable, or they withdrew their consent. In patients with previously treated recurrent or metastatic cervical cancer, tisotumab vedotin showed a controllable safety profile and promising anticancer efficacy [151].

Other drugs derived from marine sources

The hunt for novel chemicals, particularly from marine sources, has piqued the scientific community's interest due to the growing number of diabetic patients and the restricted number of anti-diabetic medications. Marine bioresources have been demonstrated to generate a variety of new scaffolds, several of which have unique structures [152, 153]. Surprisingly, a terpene (Dysidine) isolated from the sponge Dysidea villosa is now being tested in preclinical studies for the treatment of diabetes [154].

Cytarabine (Cytosar-U®, Ara-C, DepoCyt®), an anticancer medication derived from the Caribbean sponge Tethya crypta, is used to treat acute myelocytic leukemia and non-Hodgkin’s lymphoma [155, 156]. ET-743 (Yondelis®), derived from the tunicate Ecteinascidia turbinata, is approved for the treatment of tissue sarcomas and ovarian cancer, and eribulin (Halaven®), derived from the sponge Halichondria okadai [157], is approved for the treatment of metastatic breast cancer and advanced liposarcoma. Marine compounds like ziconotide (Prialt®), obtained from the cone snail Conus magus is used to treat severe and chronic pain [158], and vidarabine (Ara-A), isolated from the sponge Tethya crypta is used to treat herpes simplex infections [159].

Bioassay-guided fractionation of the EtOAc extract of marine sponges led to the isolation of three polyacetylene metabolites: a new polyacetylene diol, callyspongidiol (1), along with two known compounds, siphonodiol (2) and 14,15-dihydrosiphonodiol (3). Compounds 1–3 exhibited antiproliferative activity against HL-60 with IC₅₀ values of 6.5, 2.8, and 6.5 μg/ml, respectively. These metabolites induce apoptosis in HL-60 cells [160].

Callyspongidiol and 14,15-dihydrosiphonodiol are polyacetylenediols isolated from marine sponges and are pharmacologically active substances. Callyspongidiol and 14,15-dihydrosiphonodiol activate human DC by phenotypic and functional maturation and altered cytokine production. The results suggested that some polyacetylenediols modulate human DC function in a fashion that favors Th1/Th2 cell polarization or IL-10-producing T cells, and might have implications in tumors or in autoimmune diseases [161].

PP2A inhibition by calyculin-A increased PP2A Y307 phosphorylation without inhibiting oral cancer cells proliferation in both the cell lines. The available data suggested that abnormal, upregulated expression of p-PP2A may promote OSCC proliferation. PP2A plays a major role in various signaling pathways, including those that regulate the cell cycle, cell metabolism, cell migration, and cell survival. Calyculin-A treatment increased AKT (Ser 473) and GSK-3β (Ser9) phosphorylation levels in both the cancer cells, suggesting that this effect occurs via PP2A deactivation. The result suggests that CLA inhibited GSK-3β expression by deactivating PP2A expression [162].

The cone snail Conus pulicarius from the Philippines provides a specific habitat for actinomycetes and other bacteria. A phenotypic screen using primary cultures of mouse dorsal root ganglion neurons revealed that one C. pulicarius associate, Streptomyces sp. CP32, produces a series of natural products that enhance or diminish whole-cell Ca2+ flux. These compounds include thiazoline compounds and a series of new derivatives, pulicatins A–E (6-10) [163].

Arenamides are cyclohexadepsipeptides that are produced via marine bacterial Salinispora arenicola. There are three types of these peptides named arenamides A–C. Arenamides A and B block or inhibit the activation of TNF-induce in a dose- and time-dependent manner with IC₅₀ values of 3.7 and 1.7 μM, respectively. Furthermore, they are cytotoxic NFkappaB inhibitors and could inhibit the production of nitric oxide (NO) and prostaglandin E2 (PGE2). Also, arenamides A and B show moderate cytotoxic activity against human colon carcinoma cell line HCT-116 [164]. Derivatives of plakortin named gracilioetheres A–C from Agelas gracilis were isolated from a bioassay-guided approach from an active extract using P. falciparum assay in vitro, highlighting gracilioether B with a IC₅₀ value of 1.41 μM and moderate cytoxicity [165].

Conclusion

In this review, we have identified the derivatives of structurally unique MNPs obtained from marine sources. These MNPs display different potent bioactivities involving not only chemical effects but also pharmaceutical activities, including antibacterial, antiviral, fungicidal, cytotoxic, neurodegenerative, and antimalarial activities because these MNPs derived from marine sources usually contain reactive groups such as -OH, -NH2, and -SH in their chemical structures, and may act as antioxidants. For instance, brown seaweeds contain several bioactive forms, such as omega-3 polyunsaturated fatty acids (PUFAs), polyphenols, fucosterol, and carotenoids at the same time. Marine peptides, marine carotenoids, and marine polyphenols are superior compared to analogous terrestrial resources as they can relieve symptoms and tackle the possible side effects of pharmacological treatment, reducing the risk of complications. The microorganisms associated with the marine environment have great potential as an essential source of structurally exciting molecules. Increasing ocean exploration has brought more marine drugs to the fore. Marine organisms with novel structures and diverse behaviors generate a large number of bioactive compounds. Bioactive compounds that are modified and synthesized from derived leads are directly extracted or isolated from marine species.

Commercial medications remain limited in relieving symptoms and cannot reverse or interrupt the onset or prolong certain diseases’ progression. High cost and adverse side effects of drugs in older adults under treatment involve scientific research falling on natural treatment practices surrounding marine bioactive compounds. Marine-derived compounds have reached ongoing clinical trials against multiple diseases and have become primary drug production sources.

The consideration of marine samples will be an amazing and potential route for identifying new secondary metabolites. It is evident from the study that secondary-metabolite development patterns are highly complex and that molecular studies may enhance drug discovery. Genetic technologies and bioinformatics methods, including metagenomic approaches, genome mining, and heterologous biosynthesis, accelerate the discovery and accessibility of remaining undiscovered MNPs with novel structures and promising marine microorganism bioactivities. It is prominent that implementing multiple techniques and exploration methods could effectively facilitate the exploitation of novel MNPs with various systems. MNPs are well-known sources of secondary metabolites suggesting the potential for pharmaceutical, food, cosmetic, and medical use. Therefore, it is of great economic value and can be used for its industrial and academic needs to its new horizons.

To create new medicines for the future, knowledge about secondary metabolites from marine sources is crucial. They are an essential source of bioactive molecules and inspire drug development by supplying a mixture of several bioactive molecules that can synergize and treat several diseases with biological outcomes.

The scaffolds of terrestrial natural materials are used in more than half of all pharmaceuticals. Despite this, with the introduction of high-throughput screening technology, natural compounds have been overlooked for drug discovery. For successful drug development of complicated structures, several hurdles must be overcome, including the supply problem and target identification. Another complication is that because of variable environmental conditions; the same organism may produce various metabolites at different times. The fact that the bioactive compounds are produced by microbes living in the marine mammal, rather than the invertebrate sea hosts, is a huge obstacle [166]. A sustainable supply of separated and recognized lead compounds can be a challenge if the lead compound is only present in small quantities and/or is difficult to isolate technically [167]. The required quantity for any of the compound’s intended uses (drug, cosmetic, etc.) might range from a few grams for preclinical drug development and safety investigations in various setups to kilograms for clinical studies in various phases [166]. And the quantity of the lead compound can be a significant problem.

Furthermore, obtaining intellectual property (IP) rights for natural products with relevant bioactivities can be difficult, as naturally occurring chemicals are not always patentable in their native form, while simple modifications can be. Because of the complicated structures, the supply problem, and target identification, it is still a challenge for the researchers to translate marine-derived compounds into clinical trials [168]. The effectiveness of marine natural compounds as drug leads depends on advances in technology such as sampling methods, nanoscale NMR for structure characterization, total chemical synthesis, biosynthesis, and genetic engineering. The high level of innovation in the field of marine natural products will lead to successful marine drug discovery and development, giving us reason to believe that marine natural products will form a new wave of drugs that will flood the market and pharmacies in the future.

Abbreviations

SMs

Secondary metabolites

MNPs

Marine natural products

MRSA

Methicillin-resistant Staphylococcus aureus

VRE

Vancomycin-resistant Enterococcus faecium

MIC

Minimum inhibitory concentration

DPPH

2,2-Diphenyl-1-picrylhydrazyl

TNF-alpha

Tumor necrosis factor alpha

IL-1beta

Interleukin-1beta

TLC

Thin-layer chromatography

anti-TB

Anti-tuberculosis

SI

Selectivity index

IC

Inhibitory concentration

ROS

Reactive oxygen species

Nrf2-ARE

Nuclear factor erythroid-2-related factor 2-antioxidant response element

AChE

Acetylcholinesterase

AD

Alzheimer’s disease

PD

Parkinson’s disease

Ab

Amyloid-beta

APP

Amyloid precursor protein

RA

Rheumatoid arthritis

HCT

Human colorectal carcinoma

NCI

National Cancer Institute

PUFAs

Polyunsaturated fatty acids

Authors’ contributions

AK interpreted and analyzed the various novel bioactive compounds from marine environment and their Biological potential in different aspects. The role of various secondary metabolites in various diseases were inferred by AJ. BGN contributed to the article by analyzing the data provided and by highlighting the importance of marine derived compounds as therapeutic options in treatment of certain diseases. All authors have read and approved the manuscript for submission in the Journal of Genetic Engineering and Biotechnology.

Funding

Not applicable.

Availability of data and materials

Data sharing is not applicable to this article as no datasets were generated or analyzed during the current study.

Declarations

Ethics approval and consent to participate

Not applicable.

Consent for publication

Not applicable.

Competing interests

The authors declare that they have no competing interests.