DNA oligonucleotides (all sequences are 5′ to 3′) |
Cloning
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Constructs
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Primer pairs (fragments) |
ECT2pro:ECT2-FLAG-ADAR-ECT2ter (in pCAMBIA3300-U) |
LA336-695 (ECT2pro:ECT2), LA696-615 (FLAG-ADAR),LA616-337 (ECT2ter) |
ECT2pro:FLAG-ADAR-ECT2ter(in pCAMBIA3300-U) |
LA336-697 (ECT2pro), LA698-615 (FLAG-ADAR), LA616-337 (ECT2ter) |
AGO1pro:FLAG-ADAR-AGO1ter(in pCAMBIA3300-U) |
MVUSER1-11 (AGO1pro-FLAG), MVUSER12-22 (ADAR),MVUSER23-6 (AGO1ter) |
FLAG-ADAR (in pGEM-T Easy) |
LA696-615 (FLAG-ADAR) |
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Primers for USER cloning
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LA336.U-ECT2P.F |
GGCTTAAUAAGCAACGAACCAAGGGAAGACG |
LA337.ECT2T-U.R |
GGTTTAAUAGGTTCTCTCGGCTTCTTTGAC |
LA615.dADAR/ECT2T.R |
AGTTATUCGGCAAGACCGAACTCGTC |
LA616.dADAR/ECT2T.F |
AATAACUAAGAGGATGGTGTCGCTC |
LA695.ECT2/FLAG.R |
ATCGCAACCAUTTGCCACCACATCG |
LA696.ECT2/FLAG.F |
ATGGTTGCGAUTACAAGGATGACGATGAC |
LA697.ECT2P/FLAG.R |
AATCCAUGAGAGGAGATTCGACAAACAAAG |
LA698.ECT2P/FLAG.F |
ATGGATUACAAGGATGACGATGAC |
MVUSER1.F |
GGCTTAAUCTATCCAAATTCCAAACCATACG |
MVUSER6.R |
GGTTTAAUGATTCTGTCGATTGCTTTGCTGG |
MVUSER11.R |
ATTGGACTGUACTTGTCATCGTCATCCTTG |
MVUSER12.F |
ACAGTCCAAUGGTGGTGCCACAG |
MVUSER22.R |
ACTGCGGCAGCUCATTCGGCAAGACCGAACTCG |
MVUSER23.F |
AGCTGCCGCAGUTGATTCACCCTCTATCTATCTTTATGACC |
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Primers for site-directed mutagenesis (QuickChange) |
LA729.dADAR_E488Q_QC.F |
CAAAATCGAGTCCGGTCAGGGGACGATTCCAG |
LA730.dADAR_E488Q_QC.R |
CTGGAATCGTCCCCTGACCGGACTCGATTTTG |
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Primers for detection of point mutations
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LA660.dADAR_E488Q_CP(NlaIII).F |
CGAAAACGACACTGGTGTTG |
LA735.dADAR_E488Q_CP(NlaIII).R |
GCTTTTCACTGGAATCGTCCCAT |