Table 1.
Top 10 upregulated and downregulated circRNAs ranked by fold changes after SCI
| circRNA |
FC (abs) |
P-value |
FDR |
chrom |
chrom |
strand |
circRNA_type |
best_transcript |
GeneSymbol |
GeneSymbol |
Regulation |
| hsa_circRNA_103372 | 21.04715 | 0.034768 | 0.195768 | chr3 | chr3 | - | exonic | NM_016291 | IP6K2 | IP6K2 | up |
| hsa_circRNA_405965 | 16.28764 | 0.012321 | 0.129885 | chr2 | chr2 | - | exonic | ENST00000392929 | CCNT2-AS1 | CCNT2-AS1 | up |
| hsa_circRNA_103948 | 13.66356 | 0.037862 | 0.204714 | chr5 | chr5 | + | exonic | NM_021982 | SEC24A | SEC24A | up |
| hsa_circRNA_000102 | 12.03363 | 0.012049 | 0.128922 | chr1 | chr1 | - | intronic | ENST00000357393 | AKNAD1 | AKNAD1 | up |
| hsa_circRNA_001691 | 11.66992 | 0.027711 | 0.176117 | chr7 | chr7 | - | exonic | NM_002137 | HNRNPA2B1 | HNRNPA2B1 | up |
| hsa_circRNA_405641 | 11.58714 | 0.038655 | 0.206399 | chr17 | chr17 | - | intronic | ENST00000269392 | AZI1 | AZI1 | up |
| hsa_circRNA_104939 | 11.54522 | 0.04101 | 0.213631 | chr9 | chr9 | + | exonic | NM_005157 | ABL1 | ABL1 | up |
| hsa_circRNA_074559 | 10.41267 | 0.03915 | 0.207731 | chr5 | chr5 | - | exonic | NM_016221 | DCTN4 | DCTN4 | up |
| hsa_circRNA_008389 | 10.07535 | 0.012801 | 0.131943 | chr1 | chr1 | - | exonic | NM_018198 | DNAJC11 | DNAJC11 | up |
| hsa_circRNA_019744 | 8.532438 | 0.039087 | 0.207485 | chr10 | chr10 | - | exonic | NM_005736 | ACTR1A | ACTR1A | up |
| hsa_circRNA_103887 | 20.1334 | 0.00224 | 0.089408 | chr5 | chr5 | + | exonic | NM_138782 | FCHO2 | FCHO2 | down |
| hsa_circRNA_101836 | 19.86489 | 0.021279 | 0.159215 | chr16 | chr16 | + | exonic | NM_004555 | NFATC3 | NFATC3 | down |
| hsa_circRNA_406791 | 18.30178 | 0.001674 | 0.088954 | chr6 | chr6 | + | exonic | NM_015555 | ZNF451 | ZNF451 | down |
| hsa_circRNA_102995 | 18.21764 | 0.004734 | 0.098011 | chr20 | chr20 | + | exonic | NM_019095 | CRLS1 | CRLS1 | down |
| hsa_circRNA_102183 | 16.39273 | 0.003117 | 0.092018 | chr17 | chr17 | + | exonic | NM_004459 | BPTF | BPTF | down |
| hsa_circRNA_000581 | 16.28442 | 0.001974 | 0.088954 | chr14 | chr14 | + | exonic | NR_038354 | WDR20 | WDR20 | down |
| hsa_circRNA_101837 | 16.22925 | 0.022342 | 0.160614 | chr16 | chr16 | + | exonic | NM_004555 | NFATC3 | NFATC3 | down |
| hsa_circRNA_103572 | 16.15558 | 0.010143 | 0.121564 | chr3 | chr3 | + | exonic | uc003fyk.2 | LRCH3 | LRCH3 | down |
| hsa_circRNA_101771 | 14.87513 | 0.004531 | 0.097171 | chr16 | chr16 | + | exonic | NM_014494 | TNRC6A | TNRC6A | down |
| hsa_circRNA_092476 | 14.86703 | 0.003553 | 0.092018 | chr19 | chr19 | - | exonic | ENST00000596831 | AC004076.9 | AC004076.9 | down |