Graphical abstract
Keywords: Aloe emodin, Cerebroprotective, Cerebrotoxic proteins, MO/RCA, Molecular docking, Antioxidants
Abstract
This study involved cerebroprotective potential of aloe emodin (AE) by in silico molecular docking analysis against various cerebrotoxic proteins followed by in vivo activity on multiple occlusions and reperfusion of bilateral carotid arteries (MO/RCA) induced cerebral injury in experimental rats. Molecular docking studies were carried out to evaluate the binding affinity (or binding interaction) between AE and various proteins involved in apoptosis such as caspase-3 (CASP3) and Bcl-2-associated X protein (BAX), and proteins involved in inflammation such as interleukin-6 (IL-6), tumor necrosis factor α (TNF α), nitric oxide synthase (NOS), acid-sensing ion channel (ASIC) and glutamate receptor (GR) involved in cerebral stroke, and results were compared with that of standard drugs, minocycline, quercetin, and memantine. Cerebral ischemic reperfusion induced by MO/RCA was assessed for 10 mins reperfusion period as one cycle, and the experiment was conducted for up to 3 cycles in rats. After completion of 3 cycles, the rats were subjected to ethically acceptable animal euthanasia followed by isolation of the brains which were studied for the size of cerebral infarction, and biochemical parameters such as glutathione (GSH), malondialdehyde (MDA), catalase (CAT) were estimated from the brain homogenate. Further, histological studies were done to study neuronal contact. Results of molecular docking indicated that the AE exhibited interaction with active sites of cerebrotoxic proteins usually involved in protein functions or cerebrotoxicity. Biochemical results showed that in the untreated brain, MDA levels increased significantly, and decreased GSH and CAT levels were observed when compared to MO/RCA group, while treated rats showed a decrease in the levels of MDA and an increase in GSH and CAT levels as compared to MO/RCA rats. In comparison with sham rats and normal rats, histopathological analysis revealed neuronal damage in MO/RCA surgery rats which manifested as decreased intact neurons. However, treatment with AE 50 mg/kg b.wt. restored contact between neuronal cells. It can be concluded that AE showed cerebroprotective effect on RO/RCA with promising inhibition of cerebrotoxic proteins (apoptotic and neuroinflammatory) as evident from molecular docking studies. The cerebroprotective potential of AE could be due to its anti-inflammatory, antioxidant, and antiapoptotic principles.
1. Introduction
Ischemic stroke is a common cerebrovascular disorder, and it commonly renders patients disabled or dead (Agarwal et al., 2000, Claibome, 1985). It is among the commonest causes of disability, dementia, and death in the developed world. Among the different types of stroke, 87 % of them were found to be a cerebral ischemic stroke. Acute brain injury or brain dysfunction is a result of cerebral ischemia which occurred due to impaired blood flow towards the brain. Despite advances in recent years with effective therapeutic techniques such as intravenous thrombolysis, anti-inflammatory, and neuroprotective medications, the majority of ischemic stroke patients still have a poor prognosis with severe neurological disability due to rapid neuronal destruction (Barnham et al., 2004, Bederson et al., 1986). An important role is played by mitochondria to regulate oxidative stress at the cellular level. Oxidative stress is the primary cause of ischemia/reperfusion (I/R) damage, according to various studies. As a result, decreasing cerebral I/R damage requires limiting mitochondrial malfunction produced by oxidative stress (Peter et al. 2005).
Aloe-emodin (AE) is an anthraquinone derivative that is naturally derived and is also an active ingredient of various medicinal plants like Rheum palmatum L., Cassia occidentalis, Aloe vera L., and Polygonum multiflorum Thunb. It has potential pharmacological activities including anticancer (George, 1959), antioxidant (George, 1959), anti‐inflammatory (Farbiszewski et al. 1996), cardioprotective (Ginsberg et al., 1999, Guo et al., 2017), antifungal (Kang et al. 2021), antiviral (Vadivel et al. 2018), antibacterial (Hitoshi et al. 2020), antiplasmodial (Yasuhisa, 1978), immunosuppressive (Kumar et al. 2017), neuroprotective (Lin and Wang, 2016), hepatoprotective effects (Li-Hua et al. 2005) and dementia (Wen et al. 2008). Thus, AE has the potential to either be used for prophylaxis or for the treatment of cancers, malaria, viral infections, inflammatory disorders, type 2 diabetes, Alzheimer's disease and so on. In our current investigation, the cerebroprotective potential of AE was predicted by in silico molecular docking studies against proteins involved in apoptosis such as CASP3 and BAX and proteins involved in inflammation such as TNF α, IL-6, NOS, ASIC and GR. The cerebroprotective activity of AE was evaluated in vivo against MO/RCA induced cerebral injury in rats.
2. Materials and methods
2.1. Drugs, chemicals and reagents
Aloe emodin (Bimal Life Sciences, India), 2,3,5-Triphenyl tetrazolium chloride (TTC) (Sisco Research Laboratories Pvt. ltd., India), Thiobarbituric acid (Loba Chem. Pvt. ltd., India), n-butanol, (Merck Life Science Pvt. ltd., India) were procured and used without further purification.
2.2. Molecular docking simulation studies
The protein databank (PDB) (http://www.rcsb.org/) was used to retrieve the crystal structures of proteins, viz., BAX (PDB ID: 5 W60), TNF α (PDB ID: 5UUI), CASP3 (PDB ID: 2DKO), IL-6 (PDB ID: 1ALU), NOS (PDB ID: 6CIC), ASIC (PDB ID: 3S3X) and GR (PDB ID: 5ZG2). Preparation of the proteins was carried out with the Biovia Discovery Studio Visualizer (DSV) 2017 (Prepare protein protocol) at a physiological pH of 7.4. After downloading the 3D structures of protein molecules from the PDB database, water molecules, heteroatoms, and inhibitors were removed from the structures and the force field was applied to the protein molecule using DSV. The PubChem database was used to retrieve the Structure Data Format (SDF) of AE, minocycline (PubChem Id: 54675783), quercetin (PubChem Id: 5280343), and memantine (PubChem Id: 4054) (www.pubchem.ncbi.nlm.nih.gov/). The DSV was used to prepare and protonate ligands at a physiological pH of 7.4, and minimization of their geometry was also carried out.
The proteins were energetically minimized and active sites were predicted with the selection of maximized GRID parameters using DSV. Protein-ligand docking studies were performed between AE and target proteins (as depicted above) with standard docking protocol using the AutoDock Vina of the PyRx virtual screening platform (Oleg and Olson, 2010). Docking results of AE were compared with that of standard molecules, minocycline, quercetin, and memantine (Stefan and Gudrun, 1974). The DSV 2017 R2 software was used to visualize the proteins and the protein–ligand complexes, and the PyRx tool was used for the calculation of binding energies (kcal/mol) for the docked complexes (Oleg and Olson, 2010). Higher negative binding energy indicates higher binding affinity. Higher docked scored complexes were evaluated for the analysis of binding interactions using DSV.
2.3. Cerebroprotective activity
The Institutional Animal Ethics Committee (IAEC/CESCOP/2019-OCT-06) approved the animal study protocol and animals were maintained as per CPCSEA guidelines. Wistar albino adult rats of either sex were categorized into groups of five wherein six rats were allocated to all the groups such as group I (normal control), group II (sham control), and group III (disease control). Group IV and Group V served as pre-treatment groups of AE for 10 days at a dose of 25 and 50 mg/kg b.wt. i.p., respectively which was followed by MO/RCA surgery. After 3 cycles were completed, the rats were subjected to ethically acceptable animal euthanasia followed by isolation of the brains for the measurement of cerebral infarction size. The estimation of GSH (Inan and Ozyurt, 2012), SOD (Dong-Ju et al., 2020, Hait et al., 2013), MDA (Hait et al. 2013), and CAT (Cristina et al. 2002) were carried out with the brain homogenate.
MO/RCA surgery was performed under anesthetized condition using Ketamine and xylazine (60 and 10 mg/kg b.wt., respectively). Separation of common carotid arteries from all muscles, ligaments, their adventitial sheath, and vagus nerves was carried out. They were then occluded for 10 mins followed by reperfusion for 10 mins. This entire process was considered as one cycle. The experiment was continued for up to 3 cycles. After 3 cycles were completed, parameters such as pupil dilation, locking of cornea reflex, limb reflexes, and temperature of rectal were observed (Emine et al. 2018). A heating lamp was used to prevent the development of hypothermia.
2.4. Histopathological study
A freshly prepared 10 % neutral buffered formalin was used to fix the sagittal brain sections and these were fixed in paraffin. For histopathological examinations, paraffin sections with a thickness of 4 μm were prepared and hematoxylin and eosin (H&E) were used to stain these sections which were examined under 40 times magnification with a light microscope (Wen-yi et al. 2013).
2.5. Statistical analyses
Data were given as mean ± SEM for triplicate studies. A significant difference between groups was calculated by t-test and one-way analysis of variance (ANOVA) followed by the Dunnet comparison test. Mean values with p < 0.05 were considered statistically significant.
3. Results
3.1. Docking analysis
In the docking study, AE showed favorable binding affinities against BAX, TNF α, NOS, IL-6, and NOS as compared to the standard compound, minocycline, and against chain A of ASIC and GR compared to quercetin and memantine (Table 1)
Table 1.
Ligand | Target protein | Binding energyPyRx (-kcal/mol) | Hydrogen bond | pi-pi bond | pi-alkyl bond | pi-sigma bond | pi-anion bond | Amide-pi bond | Alkyl bond |
---|---|---|---|---|---|---|---|---|---|
AE | BAX (Chain A) | 6.5 | ARG89 (2.50 Å) | PHE93 (3.56 Å) | |||||
TNF α (Chain A) | 7.6 | VAL150 (1.74 Å), ALA33 (1.90 Å) | ALA18 (3.38 Å), PRO20 (4.18 Å), VAL17 (4.05 Å), ARG32 (4.35 Å) | ||||||
CASP3 | 6.7 | HIS A:121 (1.85 Å), ARG B:207 (2.23 Å), GLN A:161 (2.62 Å) | PHE B:256 (4.22 Å) | ||||||
IL-6(Chain A) | 6.8 | ASN63 (1.80 Å) | LEU147 (4.23 Å) | TYR97 (4.12 Å) | |||||
NOS (Chain A) | 9.1 | GLN162 (1.96 Å) | TRP414 (3.68 Å), PHE589 (4.10 Å) | CYS420 (1.55 Å) | |||||
ASIC | 8.0 | ARG B: 270 (1.63 Å), GLU A: 417 (1.75 Å), GLU B: 374 (1.85 Å), LYS C: 373 (2.22 Å), GLY B: 279 (2.65 Å), ARG C: 370 (2.69 Å) | |||||||
GR(Chain A) | 8.4 | THR501 (1.56 Å), TYR753 (2.36 Å) | TYR471 (4.15 Å) | MET279 (4.35 Å) | GLU726 (3.16 Å), GLU423 (4.32 Å) | ||||
Minocycline | BAX(Chain A) | 6.2 | ASP98 (1.90 Å) ASP102 (2.03 Å) | VAL180 (4.05 Å) | GLY179 (3.89 Å) | ||||
TNF α (Chain A) | 7.1 | ASP140 (1.93 Å), LYS65 (1.95 Å), PHE144 (2.19 Å), PRO20 (2.35 Å) | |||||||
CASP3 | 7.4 | HIS A: 121 (1.55 Å), ARG B: 207 (2.22 Å), CYS A: 163 (2.52 Å) | |||||||
IL-6 (Chain B) | 6.6 | TRP592 (1.85 Å), GLU597 (2.85 Å) | VAL B: 572 3.98 Å), MET575 4.25 Å), | PHE589 (4.32 Å), CYS420 (4.52 Å) | |||||
NOS (Chain A) | 8.8 | ARG104 (1.95 Å), GLN156 (2.55 Å), GLU106 (3.98 Å) | PHE105 (4.58 Å) | ||||||
Quercetin | ASIC | 9.3 | GLU C: 98 (1.62 Å), ARG C: 191 (1.85 Å), GLU C: 154 (2.32 Å), ARG F: 28 (2.62 Å), SER C: 241 (2.74 Å), GLU C: 243 (2.82 Å) | ||||||
Memantine | GR (Chain B) | 5.6 | GLN663 (2.25 Å), SER661 (2.56 Å) | TYR694 (3.62 Å, LYS690 (4.22 Å) |
For BAX, AE interacted with chain A of the protein. AE formed hydrogen bonds (H bonds) with ARG89 (bond distance = 2.50 Å) and pi-pi stacked with PHE93 (bond distance = 3.56 Å). AE has a binding affinity of −6.5 kcal/mol towards BAX. Minocycline formed H bonds with ASP98 and ASP102 (bond distances = 1.90 Å and 2.03 Å, respectively), amide-pi stacked with GLY179 (bond distance = 3.89 Å), and pi-alkyl bond with VAL180 (bond distance of 4.05 Å). Minocycline has a binding affinity of −6.2 kcal/mol towards BAX.
For TNF α, AE interacted with chain A of the protein. AE formed H bonds with VAL150 and ALA33 (bond distances = 1.74 Å and 1.90 Å, respectively), pi-alkyl with ALA18, PRO20, VAL17, ARG32 (bond distances = 3.38 Å, 4.18 Å, 4.05 Å, and 4.35 Å, respectively). AE has a binding affinity of −7.6 kcal/mol towards TNF α. Minocycline formed H bonds with ASP140, LYS65, PHE144, PRO20 (bond distances = 1.93 Å, 1.95 Å, 2.19 Å, and 2.35 Å, respectively). Minocycline has a binding affinity of −7.1 kcal/mol towards TNF α.
For CASP3, AE formed H bonds with HIS A:121, ARG B:207, and GLN A:161 (bond distances = 1.85 Å, 2.23 Å and, 2.62 Å, respectively), and pi-pi bond with PHE B:256 (bond distance = 4.22 Å). AE has a binding affinity of −6.7 kcal/mol towards CASP3. Minocycline formed H bonds with HIS121, ARG207, CYS163 (bond distances = 1.55 Å, 2.22 Å and, 2.52 Å, respectively). Minocycline has a binding affinity of −7.4 kcal/mol towards CASP3.
For IL-6, AE interacted with chain A of the protein. AE formed H bonds with ASN63 (bond distances = 1.80 Å), pi-sigma bond with TYR97 (bond distance of 4.12 Å), and pi-pi bond with LEU147 (bond distances = 4.23 Å). AE has a binding affinity of −6.8 kcal/mol towards IL-6. Minocycline formed H bonds with ARG104, GLN156, and GLU106 (bond distance = 1.95 Å, 2.55 Å, and 3.98 Å, respectively), pi-sigma bond with PHE105 (bond distance = 4.58 Å). Minocycline has a binding affinity of −6.6 Kcal/mol towards IL-6.
Against NOS, AE interacted with chain B of the protein. AE formed H bonds with CYS420 (bond distance = 1.12 Å), pi-pi bond with PHE589 (bond distance = 4.02 Å). AE has a binding affinity of −9.1 kcal/mol towards NOS. Minocycline formed H bonds with TRP B:592, GLU B:597 (bond distances = 1.85 Å and 2.85 Å respectively), pi-alkyl bond with VAL B:572, MET B:575 (bond distances = 3.98 Å and 4.25 Å, respectively), and alkyl bond with PHE B:589 (bond distance of 4.32 Å). Minocycline has a binding affinity of −8.8 kcal/mol towards NOS.
Against ASIC, AE formed H bonds with ARG B:270; GLU A: 417; GLU B: 374, LYS C:373, GLY B:279, ARG C:370 (bond distance = 1.63 Å, 1.75 Å, 1.85 Å, 2.22 Å, 2.65 Å, and 2.69 Å, respectively). AE has a binding affinity of −8.0 kcal/mol towards ASIC. Quercetin formed H bonds with GLU C:98, ARG C:191, GLU C:154, ARG F:28, SER C:241, GLU C:243 (bond distance of 1.62 Å, 1.85 Å, 2.32 Å, 2.62 Å, 2.74 Å and 2.82 Å, respectively). Quercetin has a binding affinity of −9.3 kcal/mol towards ASIC.
For GR, AE interacted with chain A of the protein. AE formed H bonds with TYR753 and THR501 (bond distances = 1.52 Å and 2.35 Å, respectively), pi-alkyl bond with TYR471, and MET279 (bond distances = 3.16 Å and 4.35 Å, respectively). AE has a binding affinity of −8.4 kcal/mol towards GR. Memantine formed H bonds with GLN B:663 and SER B:661 (bond distances = 2.25 Å and 2.56 Å, respectively), pi-alkyl bond with TYR B:694 and LYS B:690 (bond distances = 3.62 Å and 4.22 Å, respectively). Memantine has a binding affinity of −5.6 kcal/mol. Fig. 1 depicts detailed 2D interaction diagrams of AE-proteins complexes.
3.2. Cerebroprotective activity
In comparison to normal and sham rats, biochemical studies revealed that brain MDA levels increased significantly (10.28 ± 0.20 nmol/mg) in MO/RCA rats. In AE treated rats (25 and 50 mg/kg b.wt.), MDA levels decreased significantly (p < 0.0001) (7.27 ± 0.20 nmol/mg, 6.48 ± 0.009 nmol/mg) in comparison to sham rats, respectively. In comparison to normal and sham rats, brain GSH levels was significantly decreased (0.10 ± 0.01 nmol/mg) in MO/RCA, while GSH levels significantly increased (p < 0.1395 and p < 0.0004) in AE treated rats (25 mg/kg b.wt., 0.11 ± 0.01 nmol/mg and 50 mg/kg b.wt. 0.16 ± 0.01 nmol/mg). Brain CAT levels were significantly decreased (0.00022 ± 0.00005 nmol/mg) in MO/RCA rats, while CAT levels significantly increased (p < 0.0001, p < 0.0001, p < 0.0026) in AE treated rats (25 mg/kg b.wt., 0.0024 ± 0.00011 and 50 mg/kg b.wt., 0.0028 ± 0.00014). In comparison to the normal group and control group, the percent cerebral infract was significantly increased in MO/RCA group. Results are shown in Fig. 2 and Table 2.
Table 2.
Treatment | Infarction size (%) |
Concentration (nmol/mg) |
||
---|---|---|---|---|
GSH | MDA | CAT | ||
Normal rats | 0 | 0.2 ± 0.01*** | 5.4 9 ± 0.10*** | 0.0043 ± 0.00025*** |
Sham rats | 0 | 0.13 ± 0.01** | 7.41 ± 0.20*** | 0.0020 ± 0.00068** |
MO/RCA | 100 % | 0.10 ± 0.01*** | 10.28 ± 0.20*** | 0.00022 ± 0.00005*** |
AE 25 mg/kg | 47.75 % | 0.11 ± 0.01** | 7.27 ± 0.20*** | 0.0024 ± 0.00011*** |
AE 50 mg/kg | 63.12 % | 0.16 ± 0.01*** | 6.48 ± 0.09*** | 0.0028 ± 0.00014*** |
The data are expressed in the Mean ± Standard error of mean (SEM) of triplicate studies. Mean values of the difference between groups with p < 0.05*, p < 0.01**, p < 0.001*** are considered to be statistically significant.
In comparison to the MO/RCA group, cerebral infarction volume was significantly decreased to 47.75 % and 63.12 % in AE (25 and 50 mg/kg b.wt., respectively) which indicated that AE treatment exerts cerebroprotective activity (Fig. 3). In comparison to the rest of the groups, the histopathological study revealed that MO/RCA rats showed decreased neuronal cell intensity, increased form of the shrunken and irregular shape of a neuronal cell in the hippocampus region of the brain. Decreased intact of neurons and neuronal in MO/RCA group was reverted in AE treated rats (Fig. 4).
4. Discussion
Among the different types of stroke, high morbidity and mortality in humans are attributed to ischemic stroke. Ischemic stroke is marked by cerebral ischemia/reperfusion damage, which happens when blood flow is restored after a brief brain artery obstruction (Vesna et al. 2011). Stroke, ischemia, or inflammation can induce the release of glutamate or ATP that can further trigger different signaling cascades which can ultimately lead to neuronal injury and apoptotic cell death (Sharanya et al., 2020, Fengge et al., 2020, Marc et al., 2007, Tabassum et al., 2013, Li et al., 2014, Era and Probert, 2008, Wei et al., 2018). After cerebral ischemia/reperfusion, oxidative stress induced by increased production of ROS can result in the death of neurons, and several studies had reported the abnormality of oxidant enzymes, such as GSH, MDA, and CAT in ischemic stroke (Turley et al., 2005, PÅlo et al., 1988, Hwang et al., 1998). Neutralization of ROS (O2•-, OH•, H2O2, and lipoperoxides) occurs when GSH (an endogenous non-enzymatic antioxidant) reacts with ROS to be oxidized into GSSG (Song et al., 2020, Jingxian et al., 2013). The ratio of GSH/GSSG is regarded as a reliable indicator for the presence of ROS (Jingxian et al. 2013). The levels of GSH in MO/RCA rats were decreased in this study, whereas GSH levels were restored in AE-treated rats. Malondialdehyde (MDA) has long been employed as a marker of lipoperoxidation, which is primarily induced by hydroxyl free radical damage (OH•) (Xiong et al. 2008). After MO/RCA, an increase in the levels of MDA was observed. However, AE treatment reduced MDA levels significantly.
Our results advocate that AE offers protection against MO/RCA-induced oxidative stress by decreasing the levels of ROS and MDA while it increases GSH and CAT levels. Several studies have demonstrated that ischemia/reperfusion triggers a deleterious chain of events that include inflammation, apoptosis, production of ROS, and excitotoxicity which causes neuronal death including hippocampal neurons (Tiansong et al. 2020). Loss of neuronal cell contact resulted in morphological abnormalities in brain neurons in MO/RCA rats, according to histopathological studies. In MO/RCA rats, pre-treatment with AE enhanced neuronal cell contact, neuronal morphological modification, and neuronal diseases in the brain region, indicating that AE has a protective effect in the MO/RCA design.
The study also involved molecular docking studies of AE on proteins involved in apoptosis (BAX and CASP3), and proteins involved in inflammation (TNF α, IL-6, ASIC, and GR) to assess the binding affinity in terms of binding energy and interaction. These cerebrotoxic proteins are over-expressed during neuroinflammation (Wei et al., 2021, Yu et al., 2019), and ASIC leads to neuronal injury which is mediated by acidosis (Mavdzhuda et al. 2013). Results of docking showed that AE exhibited interactions with TNF α active sites of VAL A:17, 150, ALA A:17, 18, 33, PRO A:20, ARG A:32; CASP3 active sites of HIS A:121, ARG B:207, TRP A:414, CYC A:420; NOS active sites of PHE A:589, and GR (chain A) active sites of THR501, TYR753, GLU726, and TYR471. From molecular docking results, it can be concluded that AE interferes with the function of TNF α, CASP3, NOS, and GR through H Bonding and hydrophobic interactions, which might suppress the disease progression. Minocycline (standard compound) formed H bonding with CASP3 active sites of HIS A:121, CYS A:163, and ARG B:207; with TNF α (chain B) active sites of TRP592, GLU597, hydrophobic interactions on NOS (chain B) active sites of VAL572, MET575, PHE589, VAL421, and H bonding on IL-6 active sites of GLN A:156. Results revealed that AE exhibited a strong inhibitory effect on TNF α, CASP3, NOS, and GR, suggesting its strong protective effect against MO/RCA induced cerebral injury (cerebral ischemia/reperfusion damage) in rats. The cerebroprotective function of AE might be mediated through its antioxidant, anti-inflammatory, and antiapoptotic actions.
5. Conclusion
The findings of our present investigation suggest a potential protective role of AE against MO/RCA assault, which might be linked to the antioxidant capacity of AE. The inhibitory potential of AE against cerebrotoxic (apoptotic and neuroinflammatory) proteins was demonstrated by in silico docking analysis. Further in vivo studies are required at the molecular level (identifying the exact biological target / biochemical pathways) to explore the therapeutic potential of AE as a neuroprotective in cerebral ischemic stroke.
Declaration of Competing Interest
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
Acknowledgement
The authors would like to thank the Deanship of Scientific Research at Majmaah University for supporting this work under Project number (R-2021-234). The authors would like to extend their sincere thanks to Dr. Sagarika Chandra for her kind help in editing images/figures incorporated in this manuscript.
Footnotes
Peer review under responsibility of King Saud University.
Contributor Information
Praveen Kumar Pasala, Email: praveenpharmaco@gmail.com.
Mithun Rudrapal, Email: rsmrpal@gmail.com.
Johra Khan, Email: j.khan@mu.edu.sa.
Mohammad A. Alaidarous, Email: m.alaidarous@mu.edu.sa.
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