Table 1. Summary of the Illumina MiSeq sequences data and statistical analysis of bacterial diversity in calves with and without dam on day 35, 65 and 95.
Item | Calves with dam | Calves without dam | P-value | ||||||
---|---|---|---|---|---|---|---|---|---|
35 D | 65 D | 95 D | 35 D | 65 D | 95 D | Day (D) | Treatment (T) | D × T | |
OTUs | 1,170.5 | 1,492.1a | 1,453.8a | 1,187.3 | 1,163.8b | 1,283.9b | <0.001 | 0.011 | <0.001 |
Chao1 | 1,408.0 | 1,782.1a | 1,717.9a | 1,495.3 | 1,424.9b | 1,520.3b | 0.001 | 0.036 | <0.001 |
ACE | 1,429.0 | 1,784.9a | 1,720.7a | 1,541.0 | 1,449.2b | 1,542.8b | 0.002 | 0.072 | <0.001 |
Shannon | 4.30 | 5.79a | 5.60 | 4.40 | 4.89b | 5.41 | <0.001 | <0.001 | 0.03 |
Simpson | 0.93 | 0.99a | 0.98 | 0.91 | 0.97b | 0.99 | 0.015 | 0.27 | 0.636 |
PD | 76.75b | 88.94a | 88.36 | 86.03a | 81.39b | 86.06 | 0.006 | 0.939 | <0.001 |
Note:
Data are presented as mean of eight samples, means with different superscripts of minuscule represent significant different between the Calves with and without dam groups at the same time point.