Skip to main content
PLOS ONE logoLink to PLOS ONE
. 2022 Apr 7;17(4):e0266527. doi: 10.1371/journal.pone.0266527

Transmission patterns of tick-borne pathogens among birds and rodents in a forested park in southeastern Canada

Ariane Dumas 1,2,*, Catherine Bouchard 2,3, Antonia Dibernardo 4, Pierre Drapeau 5, L Robbin Lindsay 4, Nicholas H Ogden 2,3, Patrick A Leighton 1,2
Editor: Brian Stevenson6
PMCID: PMC8989207  PMID: 35390092

Abstract

Ixodes scapularis ticks are expanding their range in parts of northeastern North America, bringing with them pathogens of public health concern. While rodents like the white-footed mouse, Peromyscus leucopus, are considered the primary reservoir of many emerging tick-borne pathogens, the contribution of birds, as alternative hosts and reservoirs, to local transmission cycles has not yet been firmly established. From 2016 to 2018, we collected host-seeking ticks and examined rodent and bird hosts for ticks at 48 sites in a park where blacklegged ticks are established in Quebec, Canada, in order to characterize the distribution of pathogens in ticks and mammalian and avian hosts. We found nearly one third of captured birds (n = 849) and 70% of small mammals (n = 694) were infested with I. scapularis. Five bird and three mammal species transmitted Borrelia burgdorferi to feeding larvae (n larvae tested = 2257) and we estimated that about one fifth of the B. burgdorferi-infected questing nymphs in the park acquired their infection from birds, the remaining being attributable to mice. Ground-foraging bird species were more parasitized than other birds, and species that inhabited open habitat were more frequently infested and were more likely to transmit B. burgdorferi to larval ticks feeding upon them. Female birds were more likely to transmit infection than males, without age differentiation, whereas in mice, adult males were more likely to transmit infection than juveniles and females. We also detected Borrelia miyamotoi in larvae collected from birds, and Anaplasma phagocytophilum from a larva collected from a white-footed mouse. This study highlights the importance of characterising the reservoir potential of alternative reservoir hosts and to quantify their contribution to transmission dynamics in different species assemblages. This information is key to identifying the most effective host-targeted risk mitigation actions.

Introduction

Tick-borne pathogens are emerging in many parts of North America, with warming climate and other environmental changes favoring range expansion of ticks and their pathogens into new regions [1]. In Canada, the blacklegged tick, Ixodes scapularis, is establishing new populations at higher latitudes bringing with it the risk of transmission of tick-borne pathogens to resident human populations. Among these pathogens, the most common is Borrelia burgdorferi, the agent of Lyme disease, but others are emerging and represent public health concerns including the agents of Anaplasmosis, Babesiosis, Powassan disease and Borrelia miyamotoi disease [1]. In order to establish enzootic transmission cycles, these pathogens depend on the interaction between tick vectors and vertebrate hosts that are capable of serving as reservoirs. The reservoir competence of a given host species is determined by its capacity to acquire and transmit the pathogen to another vertebrate (in this case via the tick vector), thus perpetuating the pathogen in the environment [2].

Multiple species of small mammals serve as reservoirs for emerging tick-borne pathogens in Canada [1]. Mouse species, chipmunks, squirrels, and shrews has been recognised as reservoirs of the agents of anaplasmosis and Lyme disease [3]. In particular, white-footed mice, Peromyscus leucopus are a reservoir for the agents of several tick-borne diseases (e.g. babesiosis, Borrelia miyamotoi disease, Powassan encephalitis) and is considered as the most important reservoir host for Borrelia burgdorferi, the bacterial cause of Lyme disease [3]. The high level of reservoir competence exhibited by white-footed micefor these pathogens has been attributed to multiple factors. First, this species is very efficient in transmitting infection to ticks. For example, a xenodiagnosis experiment, conducted on small and medium hosts captured in Connecticut forests, highlighted the highest reservoir competency of white-footed mice compared to the other species, using RT-PCR to quantify the number of B. burgdorferi bacteria per tick collected after bloodmeal completion and moulting [2]. Also, white-footed mice can remain infected and infectious for ticks life-long for some bacterial strains (reviewed by [4]). Finally, the ubiquity of white-footed mice in natural and anthropized ecosystems in northeastern North America is also thought to accentuate its importance as a reservoir of tick-borne pathogens in this region [57]. In numerous studies, birds have been identified as long-distance dispersers of ticks and tick-borne pathogens along their seasonal migration routes [811]. In Europe, where different genospecies of B. burgdorferi sensu lato circulate, the transmission dynamics of some genospecies (particularly B. garinii) are driven by avian reservoirs, and others (B. afzellii) by rodents [12]. In North America, multiple bird species are capable of acquiring and efficiently transmitting the species-generalist genospecies B. burgdorferi sensu stricto to feeding ticks [1317]. Despite these findings, the relative lower density of birds compared to that of rodents is thought to limit their overall contribution as reservoirs [18, 19].

At the scale of an ecological community, the contribution of a species to the transmission dynamics of a tick-borne pathogen is determined by the proportion of ticks that acquired the pathogen from individuals of that species, and thus depends on the frequency with which they are fed upon by ticks, their level of infectivity and their abundance in the ecosystem [20]. In a modeling study, Giardina et al. [21] compared the proportion of nymphs that acquired their infection from birds versus rodents and concluded that birds had a negligible contribution to the overall transmission dynamics of B. burgdorferi s.s. However, empirical studies and data on the role of birds in local transmission cycles of B. burgdorferi s.s. and other tick-borne pathogens in North America are limited [22]. Greater knowledge of the role of birds is therefore needed to assess the risk of Lyme disease, and the potential impact of control measures. In particular, control strategies in which hosts are vaccinated or treated with acaricide are gaining research attention as promising avenues for the reduction of the environmental risk of tick-borne disease [2325]. Identifying the main reservoirs and their relative importance will be critical to ensuring the efficacy of host-targeted control efforts.

The natural history of tick-borne pathogens other than B. burgdorferi has received even less research attention. The reservoir competence of American Robins (Turdus migratorius) and Gray Catbirds (Dumetella carolinensis) for A. phagocytophilum was tested in laboratory assays conducted by Johnston et al. [26] and the results suggested that these species were capable of transmitting the pathogen but were unlikely to play a significant role in transmission in a natural context. Two strains of A. phagocytophilum circulate in North America, one that is pathogenic to humans (Ap-ha) with rodents (e.g., white-footed mice, chipmunks, squirrels, and shrews) as the primary reservoir, and the other that is non-pathogenic to humans (Ap-variant 1) with white-tailed deer as the primary reservoir [27]. The reservoirs of B. miyamotoi are less well known. The white-footed mouse is a competent reservoir in eastern North America [28, 29] and other species, including birds, may also act as reservoirs [30]. In a study conducted in the Netherlands, Wagemakers et al. [31] found similar rates of B. miyamotoi infection in biopsies from rodents and birds, while in the USA, a study revealed high prevalence of B. miyamotoi in wild turkeys [32]. However, further studies are needed to determine the reservoir hosts of B. miyamotoi, which is a challenging task because larvae can acquire infection transovarially from infected adult females and thus testing feeding larvae from hosts may not mean that the host was infected or acting as a reservoir [33].

In this study, we collected ticks and hosts in a forest with newly endemic Lyme disease risk in order to: i) characterize the distribution of three emerging zoonotic pathogens (B. burgdorferi, B. miyamotoi, and A. phagocytophylum) in ticks and tick hosts; ii) compare the contribution of avian hosts to B. burgdorferi transmission to that of white-footed mice; and iii) determine risk factors for tick infestation and B. burgdorferi infectivity among hosts. By comparing, for the first time in North America, the relative roles of breeding birds and rodents in maintaining enzootic cycles of emerging tick-borne pathogens including B. burgdorferi, we aim to provide a more complete picture of local host-vector-pathogen dynamics. This will improve understanding of the ecology of tick-borne pathogens and facilitate accurate risk assessment and development of effective host-targeted control strategies.

Materials and methods

Field

This study was conducted at Mont Saint-Bruno National Park (Quebec), during the summers of 2016 to 2018 (Fig 1). Mont Saint-Bruno is a forested hill (elevation: 218 m above sea level) where stands of deciduous tree species dominate, mainly sugar maple (Acer saccharum), American beech (Fagus grandifolia) and red oak (Quercus rubra). There are also several open areas attributable to man-made modifications throughout the site’s history, including former orchards, mills and cottage lots surrounded by gardens. This diverse habitat constitutes a biodiversity island of nearly 9 km2, located in the middle of an urban and agricultural plain. Located just outside of the city of Montréal, it is a popular destination for hikes, and attracts approximately one million visitors each year. A local population of blacklegged ticks, I. scapularis, as well as B. burgdorferi transmission cycles, has been established at this location for several years [34, 35].

Fig 1. The location of the study site and sampling localities in Quebec Canada.

Fig 1

For illustrative purposes, the map is an aggregated representation of habitat types and land use categories based on ecoforestry inventory data obtained from the Ministère des Forêts, de la Faune et des Parcs du Québec (https://www.foretouverte.gouv.qc.ca/). The base map is from OpenStreetMap and OpenStreetMap Foundation.

We collected questing ticks by drag sampling over a total area of 260 m2 per visit, at 32 sites distributed throughout the forested areas of the park (Fig 1), once a month between May and October of each year of the study, as described in [36]. In 2018, we added two visits (June and July) at open-fields where the birds were captured (see below), in order to characterize the exposure of captured birds to ticks in their habitat.

We aimed to sample hosts during the main period of the year when they are abundant. These periods also covered the main period of immature tick activity at this site [36]. Small mammals were trapped at each of the 32 forest sites, over a five-week period in July for three consecutive years (2016–2018). Sites were sampled on a rotating basis, with an effort of four capture days per site per year. At each site, 30 Sherman live traps were placed in 100 x 40 m rectangular grids, baited with peanut butter and apples and checked twice daily. Captured rodents were anesthetized with isoflurane, each animal was then weighed, and the sex and species of each host was determined. For white-footed mice, the relative age of each individual was determined by a weight classification [37]. All captured rodents were marked individually with subcutaneous PIT tags (model HPT8, BioMark), and the entire body surface of each host was examined visually for ticks. All attached ticks were removed using fine tipped forceps and ticks were placed into 1.5 ml tubes containing 70% ethanol. A 3 mm ear punch biopsy was collected from each rodent and placed in a 1.5 ml tube containing 70% ethanol and kept at room temperature until laboratory testing.

Birds were collected during 2017 and 2018 using four 12 meter-long mist nets (height = 2.6 m). To maximize diversity of captured birds, we collected birds at 16 open-field sites (Fig 1) in addition to a subset of 16 forest sites. We carried out two capture periods each year: the first one in early summer, during the breeding period, and the second one at the end of the summer, the post-breeding period during which family groups start to disperse [38]. In each trapping period, we censused and captured birds five days per week for five weeks (see below). At each site visit, we first conducted point counts using observation and characteristic bird song during the breeding period. Nets were opened from 5 to 11 a.m., unless adverse meteorological conditions such as heavy rain or extreme heat threatening the birds’ well-being occurred. In order to maximise capture success, we lured birds to the nets using playback recordings of conspecific songs of detected species at each site. Studies have found that in addition to increasing the capture success of target species, the use of playbacks while using mist nests could also favor capture [39, 40], or response [41] of other species, not targeted by the playback. We checked the nets and removed the birds as quickly as possible, with a maximum delay of 30 minutes. The bander’s grip [42] was used in the majority of cases for bird handling and great care was taken with plumage to avoid damage to feathers or unnecessary displacement. Captured birds were processed according to the order of capture and size of birds, with priority given to smaller birds. Species and sex of captured birds were determined and relative age (juveniles corresponding to hatch-year birds (HY) and adults second-year birds (SY) and after second-year (ASY) birds) of each capture was estimated according to molt and plumage [43]. Each bird was weighed, marked individually with unique bands, and examined visually for ticks. Attached ticks and biopsies were collected as described for rodents except a skin biopsy was collected from the prepatagial membrane of each bird using 2 mm a disposable biopsy punch. Biopsy samples were placed in tubes containing saline buffered with glycerin, preserved on ice in the field and frozen in the laboratory [44]. Any bird showing early signs of hypothermia were placed in coolers containing air-activated heat packs until they recovered, after which they were released.

Every captured animal was released at the site of capture following manipulations. All animal manipulation protocols were approved by Université de Montréal ethics committee (certificates no: 16-Rech-1837, 17-Rech-1837 and 18-Rech-1837). Bird captures were authorized by Canadian Wildlife Service (permit no: 10739D) and small mammals captures were authorized by Quebec Ministères des Forêts, de la Faune et des Parcs (certificates no: 2016SF2063R16, 20170508222316SF and 2018425241416-SF).

All ticks found on animals or removed from drag cloths were sent to the National Microbiology Laboratory for species identification and pathogen testing.

Diagnostic testing for tick-borne pathogens

All ticks were identified to species using taxonomic keys [4547]. For ticks collected by drag sampling, only a subset of up to 30 ticks of each stage per location per year were tested. For ticks removed from hosts, we tested all larvae, and a subset of up to 30 nymphs per infested host species for nymphs collected from birds. Nymphs removed from small mammals were not tested. Level of blood engorgement was determined visually and scored as: partially to fully engorged, slightly engorged, and unfed. Unfed larvae from the same individual hosts were pooled together for testing (pool sizes ranged from 2 to 27 ticks). The samples were processed within approximately one year from the date of collection. Extraction of DNA from ticks and biopsy samples was performed according to the manufacturer’s protocol using QIAGEN®DNeasy®96 Tissue kits (QIAGEN Inc., Mississauga, ON, Canada). Real-time PCR was used to detect B. burgdorferi, B. miyamotoi and A. phagocytophylum. Briefly, extracted DNA was screened using a duplex real-time PCR assay targeting the 23S and msp2 genes of Borrelia spp. and A. phagocytophilum, respectively [48]. Borrelia-positive samples were subsequently tested for B. burgdorferi and B. miyamotoi using a second ospA/flab duplex assay [49]. Biopsies from birds were taken only in 2017, and since no positive samples were detected (see Discussion), we then abandoned this technique in subsequent years. DNA collected from biopsies of Peromyscus spp. was also screened using species-specific primers (CO1) in multiplex PCR to differentiate between the sympatric and morphologically similar deer mice (Peromyscus maniculatus) and white-footed mice (P. leucopus) [50].

Statistical analysis

Pathogen prevalence in I. scapularis ticks

All analyses were carried out using R v. 4.0.3 [51]. We compared the prevalence of the three pathogens tested in I. scapularis ticks using Chi-square tests, according to their origin: questing nymphs in the environment, or feeding larvae on a host. We obtained the proportion of feeding larvae that acquired B. burgdorferi for each host species by combining results of ticks tested individually and pools of unfed ticks in a weighted (by the number of ticks) mean. We estimated the proportion of infected ticks in each pool using the Maximum-Likelihood Estimation Infection Ratio method [52].

Host risk factors for tick infestation and B. burgdorferi infectivity

To analyze the risk factors for tick infestation density and the probability of transmission of B. burgdorferi to feeding ticks, we constructed generalized mixed models with the package glmmTMB, version 1.1.1 [53]. The individual host was used as the analytical level. Infestation density refers to the number of ticks per host examined in our sample, including uninfested hosts [54]. Vertical transmission of B. burgdorferi does not occur in I. scapularis [33]. We therefore used infection in feeding larvae as an indicator that hosts could infect ticks [6, 55], and quantified infectivity as the proportion of larvae infected after feeding on a given host. We used negative binomial distributions for the infestation models, and a binomial distribution with a logit link for the infectivity models. The dependent variables for these two models were: 1) the number of larvae per individual and 2) the proportion of infected versus uninfected larvae. As explanatory variables, we tested a set of variables that could impact the probability of contact between hosts and ticks, and the probability of pathogen transmission between them, as identified in other studies (Table 1). Intrinsic individual factors such as age and sex of animals are thought to impact the risk of infestation and infectivity in mice [35, 56] and other factors such as weight and body condition in birds [8]. Given the wide diversity of avian species present at the study site and in order to explore ecological factors associated with different levels of risk between species, we also included in the bird models life history traits that are thought to modify the probability of contact with ticks, namely nest placement, foraging behavior, and preferred habitat of the species [22]. The classification of life history traits by species was based on that of the Cornell Lab of Ornithology [57]. Families were added to the bird infectivity model to account for the fact that different taxonomic groups may have developed different immune responses to tick-borne infections [15]. Next, to account for the spatial and temporal dependence that our infestation data may have, we added a capture site ID as a random intercept term, as well as the average predicted density of questing larvae in the environment on the calendar day of capture as a fixed effect term, which corrects for seasonal variability attributable to tick phenology [36]. This correction is necessary because the infestation density of hosts is driven by the contact rate with vectors, which in turns depends on the density of ticks in the environment [58]. Finally, since B. burgdorferi multiplies in the tick as it ingests blood from the infected host [59], we added the proportion of feeding larvae on each host that were engorged as a predictor in the infectivity models. Prior to model building, we verified that there was no collinearity between the explanatory variables, using a variance inflation factor (VIF) threshold of 3 [60]. The final models were selected by backward stepwise elimination. For categorical variables, we compared the levels with the Tukey adjustment for multiple comparisons with a significance level of p = 0.05. We finally confirmed the absence of residual spatial autocorrelation in the final models using Moran’s I tests [61], implemented with package ape, version 5.5 [62]. The fit of the models was verified graphically and with the diagnostic tests of the DHARMa package, version 0.4.1 [63].

Table 1. Description of variables tested in host infestation and infectivity models.
Type Variable Infestation Infectivity Unit Expected relationship
Birds Mice Birds Mice
Intrinsic factors Age x x x x Juvenile / Adult A > J
Sex x x x x Male / Female M > F
Weight x x x x Grams +
Fat score x x 0–4 -
Taxonomic Family x 8 bird families Different immune responses
Life-history traits Nest location x x Low (ground) / High (building, cavity, shrub or tree) L > H
Feeding behavior x x Bark Forager, foliage gleaner, ground forager, in flight (flycatching, or hovering) GF > BF > FG > F
Main habitat x x Forest / Open-fields (open woodland, scrub, grassland and marshes) F > O
Corrections Questing larvae by Julian day and year x x Number of ticks +
Year x x 2017, 2018 NA
Site ID x x x x 48 sites Random intercept
Engorged feeding larvae x x Number of ticks +

Contribution of hosts to B. burgdorferi transmission

We estimated the reservoir potential (RP) of each species for which we detected B. burgdorferi according to Eq 1 [6], where the parameter Infestationi represents the average larval infestation density of individuals of species i, Infectivityi the average proportion of larvae infected after feeding on individuals of a given species i, and Host densityi the estimated population density of the species i in our study area (number of individuals per hectare).

RPi=Infestationi*Infectivityi*Hostdensityi. (1)

Capture periods for birds and mice did not overlap, so to compare between birds and mice as hosts for larvae, we adjusted observed tick abundance on hosts according to the seasonality of larvae in the environment [35, 64]. To do so, we first constructed a model for individual infestation density in reservoir birds and another for white-footed mice (all Peromyscus spp. captured were determined to be white-footed mouse and not deer mouse by PCR). Variables included in these models were age, sex and weight of the animal. For birds, we took into account the non-independence of data from individuals of the same species, but grouped them by family, since the highly variable number of observations per species prevented us from using this factor in the models, generating convergence problems. To these variables we added a predicted value for larval density in the environment on the day of capture according to smoothed seasonality curves as described in Dumas et al. [36]. Capture site was included as a random effect to correct for spatial dependence and repeated measurements at the site [60]. We excluded recaptures in the calculation of infestation density to avoid a possible biais associated with the lack of independence between tick abundance on hosts and their capture status (first capture versus recapture). Ticks were removed from animals as part of processing and the same rodents could be recaptured within the same week. This was not true for birds though because successive capture periods at the same site were spaced a few weeks apart. For both models, we performed backward stepwise model selection and a negative binomial distribution using the package glmmTMB, version 1.1.1 [53]. We then calculated the values predicted by the model for a reference date (the 200th day since January 1st), which corresponds to the middle of the capture period of both groups, as the corrected value for calculation of the species reservoir potential.

White-footed mice were the only small mammal species for which we obtained sufficient captures in order to estimate population density. Raccoons in our study area frequently disturbed rodent traps leading to unequal sampling efforts between sites and visits. We therefore used a spatially explicit capture-recapture (package secr, version 4.4.1) method, allowing us to account for uneven sampling effort [65]. Disturbed traps were considered to be active at 50%, as the trap may have been sprung at any time during its deployment period. We set the influence distance of the traps to 4 times the spatial scale parameter (representing the tendency for detections to be localised), with a half-normal detection function (detection probability declines with increasing distance from the traps [66]). We estimated density for each site and year then used the average of these values as the overall density of the species in the study area.

We estimated bird density from point count surveys, which we conducted twice each year at each of the sites, during the breeding season. The point counts were all conducted between 5:00 and 9:30 am, on days without rain and with winds below 25 kilometres per hour. At each visit, three replicate blocks of five minutes were performed to maximize detection. Every bird heard or seen was directly identified by trained observers. We used the maximum number of male individuals in a 100-meter radius at any 5 minute listening block as a baseline value for each species, to which we added juvenile and female density estimates, assuming a 1:1 male-to-female ratio [21] and a juveline-to-adult ratio calculated using capture data from the post-fledging period (August). We then estimated abundance of every species for the entire study area by calculating the mean number of individuals present per site and habitat type (forest vs. open fields) and weighting this value by the proportion of the study area covered by each habitat. Finally, these estimates were adjusted to account for variable detectability of bird species, which is associated with the average frequency at which individuals of a species produce sound signals, the singing rate (SR), and the average distance at which their song can be detected, the detection distance (DD) [67]. Although these two parameters can be estimated directly from survey data, we detected too few individuals of each species to perform the analysis and we instead used published estimates [67] based on a time-removal model for SR [68] and a distance-sampling model [69] for DD. SR defines the probability that individuals of a given species are available to be perceived, if present (availability, p, Eq 2), and DD defines the probability that an individual of the species will be detected if it produces a sound signal (perceptibility, q, Eq 3). The probability of detection is the product of these two components (pq) [70].

p=1exp(t*SR) (2)
q=DD2(1exp(r2/DD2))r2 (3)

where t is the duration of the listening period in minutes, SR is the singing rate of the species,

p=1exp(t*SR)

DD is the detection distance of the species and r is the radius of the listening area in meters.

We compared the relative contribution of each species and family by calculating their relative reservoir potential (RRP) according to Eq 4 [6] with the numerator being the RP of the species or the sum of the RPs of the family and the denominator being the sum of the RPs of all species considered.

RRP=RPis(RPi) (4)

Results

Field sampling of ticks and hosts

We collected 25,150 larvae, 4,177 nymphs and 232 adult blacklegged ticks by drag sampling. The mean density of nymphs (DON) was 3.2/100 m2 (s.d. 4.8) and ranged from 0 to 42.7 nymphs/100 m2.

Small mammal trapping resulted in the collection of 665 mice (P. leucopus), 13 Eastern chipmunks (Tamias striatus), 15 Northern short-tailed shrew (Blarina brevicauda) and one Red-backed vole (Myodes gapperi). Of these, 249 mice and 18 chipmunks were recaptured at least once. We found 470 (70.68%) mice, 12 (92.31%) chipmunks and 2 (13.33%) shrews infested with at least one tick. Ticks were not found on the only vole captured. The abundance of larvae and nymphs per hosts were, respectively, 2.32 and 0.17 for mice, 2.4 and 5.77 for chipmunks and 0.23 and 0 for shrews. Ticks collected from small mammals were predominantly attached to the ears.

We captured 849 birds belonging to 50 different species, and 78 individuals were recaptured at least once. Birds from 8 families accounted for 86% of all captures (from the most to the least common these were: Parulidae, Passerellidae, Turdidae, Fringillidae, Paridae, Picidae, Vireonidae and Tyrannidae, Table 2). Ticks were found on 245 (28.86%) birds, with the majority of these ticks removed from members of the Passerellidae (37.41%), Turdidae (31.11%) and Parulidae (17.04%) families. Among all the bird species captured, the abundance of larvae and nymphs was 0.50 and 0.65 ticks per individual, respectively (Table 2). Two birds carried Ixodes muris nymphs, a Song Sparrow (Melospiza melodia) with two ticks and a White-throated Sparrow (Zonotrichia albicollis) with one. Ticks collected from birds were predominantly attached around the eyes and beak.

Table 2. Summary of Ixodes scapularis infestation and Borrelia burgdorferi, Borrelia miyamotoi and Anaplasma phagocytophilum infection detected in ticks feeding on breeding birds captured and censused at Mont-Saint-Bruno National Park in 2017 and 2018.

Birds Feeding larvae Feeding nymphs
Species No. captured Density (ind/ha) Infestation prevalence No. ticks collected Infestation intensity1 Mean infectivity2 Pos. Bb3 (n) MLE IR pools4 No. ticks in pools Pos. Bm5 (n) Pos. Ap6 (n) No. ticks collected Tested (n) Pos. Bb (n) Pos. Bm (n) Pos. Ap (n)
Birds that have infected I. scapularis feeding larvae with B. burgdorferi
Chipping Sparrow 18 0.57 0.33 19 3.17 0.11 17 0 2 0 0 28 26 1 0 2
Hermit Thrush 39 1.57 0.74 75 2.59 0.19 61 0.08 14 1 0 141 30 6 0 3
House Wren 2 0.19 0.50 10 10.00 0.20 5 0 5 0 0 2 2 0 0 0
Dark-eyed Junco 3 0.27 0.33 1 1.00 1.00 1 - 0 0 0 4 2 1 0 0
Song Sparrow 107 1.16 0.31 181 5.48 0.20 99 0.09 82 1 0 296 34 4 1 0
Subtotal 169 3.77 0.44 286 4.45 0.34 183 0.08 103 2 0 471 94 12 1 5
Birds that were infested with I. scapularis but that did not transmit B. burgdorferi infection
American Goldfinch 86 9.16 0.01 1 1.00 0.00 0 0.00 0 0 0 2 2 1 0 0
American Redstart 24 6.93 0.04 1 1.00 0.00 0 0.00 0 0 0 4 4 1 0 0
American Robin 1 1.19 0.00 0 0.00 - - - - - - 2 1 1 0 0
Black and white Warbler 10 - 0.30 3 1.00 0.00 0 0.00 0 0 0 8 7 1 0 0
Black-billed Cuckoo 2 - 0.00 0 0.00 - - - - - - 1 1 0 0 0
Black-capped Chickadee 74 9.09 0.05 10 2.50 0.00 0 0.00 0 0 0 3 3 1 0 0
Brown-headed Cowbird 4 0.27 0.00 0 0.00 - - - - - - 1 1 1 0 0
Blue Jay 1 1.01 1.00 6 6.00 0.00 0 0.00 0 0 0 1 1 1 0 0
Cedar Waxwing 25 11.17 0.00 0 0.00 - - - - - - 11 10 1 0 3
Common Yellowthroat 28 0.93 0.11 10 3.33 0.00 0 0.00 0 0 0 25 24 2 0 2
Eastern Phoebe 15 0.32 0.00 0 0.00 - - - - - - 1 1 1 0 0
Gray Catbird 26 - 0.00 0 0.00 - - - - - - 4 4 1 0 1
Indigo Bunting 13 0.62 0.08 1 1.00 0.00 0 0.00 0 0 0 7 7 0 0 2
Northern cardinal 8 - 0.00 0 0.00 - - - - - - 4 4 2 0 0
Ovenbird 49 3.17 0.31 39 2.60 0.00 0 0.00 0 0 0 10 9 0 0 0
Pileated Woodpecker 3 1.43 0.00 0 0.00 - - - - - - 1 1 0 0 0
Rose-breasted Grosbeak 6 0.86 0.17 2 2.00 0.00 0 0.00 0 0 0 1 1 0 0 0
Red-eyed Vireo 54 4.92 0.02 1 1.00 0.00 0 0.00 0 0 0 2 2 0 0 0
Scarlet Tanager 2 2.08 0.50 1 1.00 0.00 0 0.00 0 0 0 3 3 2 0 0
Veery 46 2.36 0.20 12 1.33 0.00 0 0.00 0 1 0 57 31 3 0 6
White-breasted Nuthatch 28 2.60 0.11 6 2.00 0.00 0 0.00 0 0 0 6 6 1 0 0
Wood Thrush 17 0.72 0.18 11 3.67 0.00 0 0.00 0 0 0 20 18 0 1 0
White-throated Sparrow 5 0.11 0.00 0 0.00 - - - - - - 3 3 1 0 1
Subtotal 527 58.92 0.13 104 1.28 0.00 0 0.00 0 1 0 177 144 21 1 15
Birds not infested with I. scapularis
Blue-headed Vireo 1 0.67 0.00 0 0.00 - - - - - - 0 - - - -
Blackburnian Warbler 6 1.08 0.00 0 0.00 - - - - - - 0 - - - -
Brown Creeper 1 0.00 0 0.00 - - - - - - 0 - - - -
Black-throated Green Warbler 25 4.90 0.00 0 0.00 - - - - - - 0 - - - -
Chestnut-sided Warbler 4 0.19 0.00 0 0.00 - - - - - - 0 - - - -
Downy Woodpecker 24 2.95 0.00 0 0.00 - - - - - - 0 - - - -
Eastern Wood-Pewee 14 2.46 0.00 0 0.00 - - - - - - 0 - - - -
Field Sparrow 1 - 0.00 0 0.00 - - - - - - 0 - - - -
Great-crested Flycatcher 7 - 0.00 0 0.00 - - - - - - 0 - - - -
Hairy Woodpecker 11 2.76 0.00 0 0.00 - - - - - - 0 - - - -
Least Flycatcher 6 2.34 0.00 0 0.00 - - - - - - 0 - - - -
Purple Finch 1 0.12 0.00 0 0.00 - - - - - - 0 - - - -
Red-breasted nuthatch 2 - 0.00 0 0.00 - - - - - - 0 - - - -
Ruby-throated Hummingbird 1 1.61 0.00 0 0.00 - - - - - - 0 - - - -
Swamp Sparrow 2 0.03 0.00 0 0.00 - - - - - - 0 - - - -
Swainson’s Thrush 1 - 0.00 0 0.00 - - - - - - 0 - - - -
Tennessee Warbler 1 - 0.00 0 0.00 - - - - - - 0 - - - -
Traill’s flycatcher 6 - 0.00 0 0.00 - - - - - - 0 - - - -
Yellow-bellied Flycatcher 4 - 0.00 0 0.00 - - - - - - 0 - - - -
Yellow-bellied Sapsucker 18 2.41 0.00 0 0.00 - - - - - - 0 - - - -
Yellow Warbler 13 0.91 0.00 0 0.00 - - - - - - 0 - - - -
Northern Flicker 4 - 0.00 0 0.00 - - - - - - 0 - - - -
Subtotal 153 23.52 0.00 0 0.00 - - - - - - 0 - - - -

1Mean number of ticks per infested host in our sample

2Weighted mean between results from larvae tested individually and pooled unfed larvae, according to the number of ticks

3Bb: Number of Borrelia burgdorferi positive ticks

4Maximum-Likelihood Estimation Infection Ratio calculated from pools of unfed larvae

5Bm: Number of Borrelia miyamotoi positive ticks

6Ap: Number of Anaplasma phagocytophilum positive ticks.

Tick-borne pathogens detected in hosts tissues

We tested 625 biopsies from mice and 212 (33.92%) were positive for B. burgdorferi, 3 (0.48%) for B. miyamotoi and none for A. phagocytophilum. We tested 13 chipmunk biopsies and 11 (84.62%) were positive for B. burgdorferi, 2 (15.38%) for B. miyamotoi and 1 (7.69%) for A. phagocytophilum. The detection of B. burgdorferi from biopsy samples and from feeding larvae collected from the same individuals showed good agreement (Cohen’s kappa = 0.67, p < 0.01).

Pathogens were not detected in any of the bird biopsies (n = 262).

Pathogen prevalence in I. scapularis ticks

We tested 2,210 questing nymphs (63.52% of the total questing nymphs collected) and found an overall prevalence of 9.10% (range: 7.98–10.55%) for B. burgdorferi across the three years of the study. The prevalence of infection was lower for other pathogens, with values of 0.77% for B. miyamotoi and 2.26% for A. phagocytophilum. We did not find any co-infections in the questing nymphs.

We tested all 2,257 I. scapularis feeding larvae (including 1,226 ticks tested individually and 1,031 unfed ticks tested in pools), which were collected from 19 bird species and three small mammal species. Borrelia burgdorferi prevalence in feeding larvae (26.97%) was higher than in questing nymphs (9.10%, χ2 = 204.19, p < 0.001, Table 3). Similarly, the prevalence of B. miyamotoi was higher in feeding larvae (1.47%) than in questing nymphs (0.77%, χ2 = 3.98, p = 0.05). Larvae infected with B. miyamotoi were collected from three birds (one Hermith Thrush (Catharus guttatus), one Song Sparrow and one Veery (Catharus fuscescens); prevalence: 0.77%; Tables 2 and 3), 15 mice (prevalence: 1.47%, Table 3) and one chipmunk (prevalence: 13.64%, Table 3). Anaplasma phagocytophilum was also present at low levels in our samples, but more prevalent in questing nymphs (2.26%) than in feeding larvae (0.64%, χ2 = 29.04, p < 0.001, Table 3). Co-infections of B. burgdorferi and B. miyamotoi, were detected in 15/929 larvae tested individually and 4/197 pools (prevalence: 1.04%) feeding on seven white-footed mice and from 2/16 larvae tested individually (prevalence: 9.09%) collected from one chipmunk.

Table 3. Prevalence (%) of B. burgdorferi, B. miyamotoi and A. phagocytophilum in questing nymphs and larvae removed from hosts with 95% confidence intervals of exact binomial tests.

Pathogen Questing nymphs Feeding larvae
Mice Chipmunks Birds all sp.
Tested individually Tested in pools Combined Tested individually Tested in pools Combined Tested individually Tested in pools Combined
B. burgdorferi (Bb) 9.1 46.93 12.22 29.73 37.50 0.00 27.27 17.63 5.67 14.19
[7.9–10.3] [43.68–50.20] [9.88–14.87] [26.93–32.69] [15.20–64.57] [0.00–27.39] [11.05–54.43] [13.33–22.62] [2.04–12.05] [10.09–19.59]
(201) (436) (85) (521) (6) (0) (6) (49) (5) (54)
B. miyamotoi (Bm) 0.8 2.37 0.57 1.47 18.75 0.00 13.64 1.08 0.00 0.77
[0.4–1.2] [1.47–3.56] [0.20–1.22] [0.85–2.40] [4.05–45.65] [0.00–27.39] [2.94–40.67] [0.22–3.12] [0.00–1.70] [0.16–2.71]
(17) (22) (5) (27) (3) (0) (3) (3) (0) (3)
A. phagocytophilum (Ap) 2.3 0.11 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00
[1.7–3.0] [0.00–0.60] [0.00–0.21] [0.00–0.41] [0.00–0.00] [0.00–27.39] [0.00–7.47] [0.00–0.00] [0.00–1.70] [0.00–0.49]
(50) (1) (0) (1) (0) (0) (0) (0) (0) (0)
Coinfections Bb—Bm 0.00 1.61 0.45 1.04 12.50 0.00 9.09 0.00 0.00 0.00
[0.0–0.2] [0.91–2.65] [0.14–1.04] [0.53–1.85] [1.55–38.35] [0.00–27.39] [1.13–35.36] [0.00–0.00] [0.00–1.70] [0.00–0.49]
(0) (15) (4) (19) (2) (0) (2) (0) (0) (0)
Coinfections Bb—Ap 0.00 0.00 0.00 0.00 0 0.00 0.00 0.00 0.00 0.00
[0.0–0.2] [0.00–0.00] [0.00–0.21] [0.00–0.10] [0.00–0.00] [0.00–27.39] [0.00–7.47] [0.00–0.00] [0.00–1.70] [0.00–0.49]
(0) (0) (0) (0) (0) (0) (0) (0) (0) (0)
Number of ticks 2210 929 197 1126 16 1 17 278 24 302

Ticks partially fed to fully engorged with hosts’s blood were tested individually, and unfed ticks were tested in pools per host. The numbers in brackets indicate confidence intervals and the numbers in parenthesis indicate number of positive ticks among those tested, for each category.

The prevalence of B. burgdorferi in larvae collected from 138 mice and 2 chipmunks was 29.73% and 27.27%, respectively (Table 3). None of the three larvae collected from shrews were infected with pathogens. The prevalence of B. burgdorferi-infected larvae collected from birds was 14.19% (Table 3), ranging from 0 to 100% (1/1 infected larva collected from a Dark-eyed Junco (Junco hyemalis)), depending on the species.

Of the three I. muris nymphs collected from birds, two were infected with B. burgdorferi (prevalence: 66.67%) and the remaining nymph was infected with A. phagocytophilum (prevalence: 33.33%).

Hosts risk factors for infestation with blacklegged ticks and infectivity with B. burgdorferi

We found a positive relationship between the density of larvae collected by drag sampling and tick infestation density on hosts (Table 4). In birds, open-habitat species carried 2.56 times more [95% CI: 1.45–4.50] larvae than forest species. Ground-nesting species carried 2.86 times more [95% CI: 1.69–4.86] larvae than species that nest in trees or shrubs (Table 1). Feeding behavior was also explanatory in some cases; ground foragers carried 7.74 times more larvae [95% CI: 3.36–17.81] than foliage gleaners, but the differences were not significant when comparing other feeding behaviors with each other (multiple comparisons with Tukey adjustment, p = 0.05). For mice, sex of the host was the only intrinsic factor to be significantly associated with the number of ticks infesting hosts, where males carried on average 1.51 times more larvae [95% CI: 1.16–1.97] than females. In both cases, the data followed a negative binomial distribution and both models showed no significant residual spatial autocorrelation (bird model: p = 0.52, mouse model: p = 0.26).

Table 4. Fixed effect parameter estimates for the best generalized mixed models of larval abundance on hosts (models 1 and 2) and the probability of transmission of B. burgdorferi from host to feeding larva (models 3 and 4) in 2017 and 2018*.

Parameters β SE P
Model 1: Birds infestation
(Intercept) -2.472 0.379 <0.001
Habitat
Open fields (vs. Forest) 1.052 0.270 <0.001
Nest location
Low (vs. High) 0.940 0.288 <0.001
Feeding behavior
Bark forager (vs. Ground forager) -1.117 0.591 0.059
In flight (vs. Ground forager) -0.192 0.006 0.997
Foliage gleaner (vs. Ground forager) -2.046 0.425 <0.001
Predicted density of questing larvae 0.063 0.010 <0.001
Model 2: Mice infestation
(Intercept) -1.123 0.221 <0.001
Sex
Male (vs. Female) 0.413 0.135 0.002
Predicted density of questing larvae 0.123 0.010 <0.001
Model 3: Birds infectivity
(Intercept) -3.472 1.068 0.001
Sex
Female (vs. Male) 1.382 0.505 0.006
Habitat
Open fields (vs. Forest) 2.344 1.073 0.029
Model 4: Mice infectivity
(Intercept) -1.006 0.228 <0.001
Sex 0.427 0.226 0.059
Female (vs. Male)
Age 1.299 0.214 <0.001
Adults (vs. Juvenile)
Number of engorged larvae 0.233 0.079 0.003

*The first models (1 and 2) were fitted with a negative binomial distribution, and the second (3 and 4) with binomial and beta binomial distributions respectively. For all models, the capture site was included as a random effect.

The factors determining the probability of transmission of B. burgdorferi to larvae were different in birds and mice (Table 4). Sex of the host influenced transmission in both cases, but conversely: females were associated with a higher probability of infection in birds (OR: 3.98 [95% CI: 1.48–10.72]), whereas in mice, males were more likely to transmit infection (marginally significant association, p = 0.059, OR: 1.26 [95% CI: 1.09–1.93]) than females. Age affected this probability only in mice, where adults were at higher risk of transmitting infection than juveniles (OR: 3.67 [95% CI: 2.41–5.58]). As with the tick abundance, birds living in open-habitats were more likely than forest species (OR: 10.42 [95% CI: 1.27–85.38]) to infect feeding ticks. Finally, ticks that fed on a host for longer were more likely to transmit infection but this relationship was only significant for mice. Because of overdispersion in the mouse data (dispersion parameter = 2.09), we fitted the model using a beta binomial distribution [71]. For the bird model, the dispersion was less pronounced (dispersion parameter = 1.86) and the beta-binomial distribution did not improve the fit, so the binomial distribution was retained. Neither model showed significant residual spatial autocorrelation (bird model: p = 0.97, mouse model: p = 0.11).

Contribution of hosts to B. burgdorferi transmission cycles

We compared B. burgdorferi reservoir potential of species for which we found feeding larvae infected by this pathogen, and for which we could obtain population density estimates in our study area. This analysis therefore excluded the Eastern chipmunks, for which we found infected larvae but captured insufficient animals to accurately estimate density.

We found infected larvae on five species of birds: Dark-eyed Junco, Song Sparrow, Chipping Sparrow (Spizella passerina), House Wren (Troglodytes aedon) and Hermit Thrush. The density of these species ranged from 0.27 to 1.57 individuals per hectare and the most abundant species in our study area were the Song Sparrow (n = 60) and Hermit Thrush (n = 36). The average abundance of larvae on birds of these five species was 1.47 larvae and ranged from 0.88 to 5.00 larvae, depending on the species (Table 5). The average infectivity of individuals ranged from 11 to 100% (the only larva found on Dark-eyed Juncos was infected) and from 19 to 20% by family. Comparing the species in which we detected B. burgdorferi by family, these represented between 1 and 11% of the relative reservoir potential, together totaling 18% of the estimated transmissions in this host community (Table 5).

Table 5. A comparison of the reservoir potential for the hosts individuals in which we detected B. burgdorferi, grouped by species and by family.

Infestation Infectivity Density Reservoir potential (RP) Relative reservoir potential (RRP)
Species / Family1 No. individuals examined2 Observed larvae density Model- adjusted3 Average individuals infectivity4 No. feeding larvae analysed Species density (ind/ha) RP-raw RP-adjusted RRP-raw RRP- adjusted
Passerellidae 78 1.19 0.61 0.20 201 2.00 0.47 0.24 0.08 0.06
Chipping Sparrow 16 0.88 0.70 0.11 19 0.57 0.05 0.04 0.01 0.01
Dark-eyed Junco 2 0.50 0.54 1.00 1 0.27 0.14 0.15 0.02 0.03
Song Sparrow 60 1.30 0.59 0.20 181 1.16 0.31 0.14 0.05 0.03
Turdidae 36 1.86 1.62 0.19 75 1.57 0.55 0.48 0.09 0.11
Hermit Thrush 36 1.86 1.62 0.19 75 1.57 0.55 0.48 0.09 0.11
Troglodytidae 2 5.00 1.64 0.20 10 0.19 0.19 0.06 0.03 0.01
House Wren 2 5.00 1.64 0.20 10 0.19 0.19 0.06 0.03 0.01
Cricetidae 450 2.71 1.99 0.30 1842 6.02 4.87 3.58 0.80 0.82
White-footed mouse 450 2.71 1.99 0.30 1842 6.02 4.87 3.58 0.80 0.80

1Data are aggregated by species or family. The relative reservoir potential (RRP) indices sum up to 1 in both cases.

2Excludes recaptured individuals and those for whom there was missing data in the variables included in the infestation model.

3 Rates adjusted according to predictions of the number of feeding larvae for Julian day 200 of each sampling year, based on negative binomial GLMMs models of host infestation.

4Weighted means of results from larvae tested individually and pools of unfed larvae.

A total of 450 individual white-footed mice were included in the analysis of reservoir potential and the estimated density of this species was 6.02 individuals per hectare. The average number of ticks on mice was 2.71 larvae per individual, the observed infectivity in mice was 30% and their reservoir potential, relative to the bird species was 82% of estimated transmissions (Table 5).

Discussion

In this fine-scale field study, we investigated and compared the role of breeding birds to rodents in local transmission dynamics of B. burgdorferi s.s., A. phagocytophilum and B. miyamotoi, which are emerging pathogens in southeastern Canada. We provided a first record of B. miyamotoi detected from larvae collected from birds. Our intensive sampling of breeding birds allowed us to highlight the contribution of this host group to the transmission cycle of the most prevalent tick-borne pathogen, B. burgdorferi. Nearly one third of captured birds were infested with I. scapularis, five species could efficiently transmit B. burgdorferi to larvae during their blood meal and based on these data we estimated that birds may account for approximately one fifth of the infected host-seeking I. scapularis nymphs in the park. In small mammals, white-footed mice dominated the sample and accounted for the remaining 80% of estimated nymph infections by B. burgdorferi. Given that this tick stage is associated with a high risk of disease transmission to humans, this study highlights the importance of acquiring more knowledge about alternative reservoir hosts, the strains they can transmit, and the possible impacts on the ecology and epidemiology of tick-borne diseases.

Pathogen prevalence in I. scapularis ticks

We detected B. burgdorferi, B. miyamotoi and A. phagocytophilum in host-seeking I. scapularis nymphs, signifying a possible risk of infection for human populations frequenting the park where the study took place. The most prevalent pathogen was B. burgdorferi, followed by A. phagocytophilum and B. miyamotoi, which had prevalence in unfed nymphs comparable to rates reported elsewhere in Canada [72, 73].

In feeding I. scapularis larvae, B. burgdorferi was also the dominant pathogen, followed by B. miyamotoi, and was observed in ticks collected from chipmunks, mice, and birds (a Hermit Thrush, a Song Sparrow, and a Veery). Another North American study also detected B. miyamotoi from ticks (I. dentatus) collected from passerines [74]. Since B. miyamotoi can be transmitted transovarially [33] we cannot infer the reservoir competence of chipmunks and birds from these results. A study performed on a sample of hunter-harvested white-tailed deer from Wisconsin, USA suggested that deer may also be a reservoir for B. miyamotoi [75]. Future studies considering all these different species, as well as xenodiagnostic experiments [28], will be necessary to better characterise the reservoirs of this pathogen. Although the prevalence of this pathogen was lower than those reported in endemic areas of the northeastern USA [28, 33, 74], the fact that it was detected in resident hosts in addition to questing nymphs suggests that it may have begun to circulate locally in this area. In order to establish viable populations into new areas, tick-borne pathogens depend on the local host community to efficiently reproduce [76]. Thus the detection of an emerging pathogen only from questing ticks, as has been the case to date in other published studies in Canada [1, 72, 73], may be attributable to founder events (e.g. dissemination of immature infected ticks by migratory birds [77]) that do not necessarily demonstrate the establishment of a local transmission cycle.

Anaplasma phagocytophilum was present in larvae collected from hosts in lower proportion than in questing nymphs, with only one tick infected with A. phagocytophilum collected from a white-footed mouse. Although our analyses did not attempt to distinguish the Ap-ha strain from the Ap-variant 1 strain, the detection of an infected larva from a mouse suggests the Ap-ha variant, given the demonstrated inability of mice to transmit the Ap-variant 1 [78]. The very low proportion of infected larvae collected from hosts suggests that other hosts not sampled in our study may act as reservoirs for this pathogen, notably white-tailed deer which are associated with the maintenance of Ap-variant 1 [79].

Infestation with blacklegged ticks and B. burgdorferi prevalence in ticks collected from birds

Nearly 30% of the birds captured in our study (belonging to 28 species) were infested with I. scapularis ticks. Among these, we identified five bird species that can effectively transmit B. burgdorferi to naïve larvae, with infectivity rates ranging from 11 to 20%. Comparing these rates by species, they are all at least two times higher than those reported in a recent meta-analysis by Loss et al. [22] on the role of birds in tick-borne pathogens dynamics in North America.

For the remaining 23 infested species, we could not demonstrate that these species were capable of transmitting B. burgdorferi. Of these, 14 were parasitized by both larvae and nymphs and for 5 of these, none of the ticks tested positive for B. burgdorferi. Since the prevalence of B. burgdorferi in questing nymphs is close to 10%, this discrepancy in prevalence in feeding nymphs among hosts could mean that certain species can clear tick infection during a blood meal, for example through activation of the complement pathway by the host’s innate immune system [59, 80]. It had previously been suggested that certain bird species may act as zooprophylactic hosts [10, 16], but more studies are still needed to associate the patterns observed here and the immune mechanisms involved.

For the other nine species for which we could not demonstrate the ability to transmit B. burgdorferi via infection of feeding larvae, we did detect the pathogen from feeding nymphs, with prevalence of infection comparable to or higher than that observed in questing nymphs. This was the case for the Black-and-White Warbler (Mniotilta varia), Black-capped Chickadee (Poecile atricapillus), Common Yellowthroat (Geothlypis trichas), Veery and White-breasted Nuthatch (Sitta carolinensis), suggesting that these species may be ineffective as reservoirs, but are not zooprophylactic hosts. This may be due to low bacterial loads in the blood of the birds or the infectious periods being too short or variable to allow efficient transmission and enzootic maintenance of the pathogen [59]. While we could not find any mention of bird-to-larva transmission of B. burgdorferi for Black-capped Chickadees and White-breasted Nuthatches in the literature, it has been reported that Black-and-White Warblers can infect a small proportion of larvae [22], whereas Common Yellowthroats and Veerys are considered efficient transmitters [18, 22]. The differences between our results and those from other parts of North America could be due to regional differences in B. burgdorferi strains, which may be more or less well-adapted to certain host species, as observed in Europe with B. burgdorferi s.l. [59]. It may also be that we were simply not able to collect enough individuals of these host species and enough larvae from them to allow us to reliably detect the infection in them.

Hosts risk factors for infestation with blacklegged ticks and infectivity with B. burgdorferi

Birds associated with open habitats were more densely infested and more likely to infect larvae with B. burgdorferi than birds from forested habitats, which contrasts with results from other North American studies that reported higher numbers of ticks per bird when animals were collected in large and dense forest patches [15, 81]. However, these studies were conducted in different ecological settings than ours (in terms of climate, plant and wildlife species composition of forests and open habitats), therefore more studies will be needed to explain these divergent results. Ground foragers were more densely infested than other birds, while no such difference between groups was found regarding nest location. This is consistent with the results of several other studies [8, 22, 8184] that found foraging behavior to be more important than time spent on the ground per se (e.g., on a nest) for explaining tick acquisition [15, 22]. The majority of bird species (80%, 4/5) and individuals (83%, 97/117) for which we could demonstrate reservoir competence were also ground foragers. The effect of this specific behavior on the chances of infecting larvae could not be highlighted by our model for individual bird infectivity (too few observations in the other behavior categories). However, we found high proportions of individuals and species belonging to this group among those in which pathogen transmission to larvae was detected. This suggests that this behavior may also be determinant in species’ contribution to the transmission cycle of B. burgdorferi. Indeed, increasing the prevalence of the infested hosts and the intensity of their infestation by ticks generally leads to an increase in their chances of acquiring tick-borne pathogens and retransmitting them to feeding ticks [59].

Adult male mice were both more densely infested and more likely to transmit B. burgdorferi to larvae than female and juvenile mice, which is consistent with previous studies and the explanation that males contact ticks more often because they have a larger home range and generally more exploratory behavior than female and juvenile mice [35, 56]. In birds, sex of the animal was not a predictor of abundance of ticks, but the probability of infecting larvae was higher in female than in male birds. This may be due to a different energy balance between females and males (e.g. high energy cost of reproductive effort by females), which may in turn affect the strength of immune suppression mechanisms [85]. Age of birds did not influence infestation or infectivity rates, contrary to previous observations that juveniles were more densely infested [86] and transmitted infection more often than adults [16].

Contribution of hosts to B. burgdorferi transmission

We estimated that approximately one fifth of infected nymphs in the park would have acquired their infection from a bird, assuming that the survival rate from larvae to nymphs is equivalent regardless of the species used as host. Excluding the Dark-eyed junco for which we obtained a single positive larva, the bird species with the greatest reservoir potential for B. burgdorferi was the House Wren, followed by the Hermit Thrush, Song Sparrow and Chipping Sparrow. These are species for which previous studies had already suggested a reservoir competency [15, 18, 22], but whose contribution was considered low compared to other common reservoir bird species, such as American Robin and Northern Cardinal (Cardinalis cardinalis) [18, 22]. We estimated that white-footed mice are likely responsible for infecting most of the nymphs in the park, which is in line with current evidence that this species is the principal reservoir of B. burgdorferi s.s. in eastern North America [87]. This estimate of species reservoir potential was a function of three parameters: the average number of larvae infesting individual hosts, their ability to transmit B. burgdorferi to uninfected ticks, and their density in the habitat. On average, larval abundance on reservoir bird species was slightly lower (1.47 larvae/individual) than that of mice (2.71 larvae/individual). Nevertheless, these data show that birds can be frequently used as a host for immature stages of I. scapularis, contrary to what has been found in other studies [21]. Also, the level of infectivity of these reservoir bird species was about 10% lower than that of mice. Finally, the density of mice in the park was much higher than that of the five reservoir bird species. Low relative density therefore appears to be the most limiting factor in the contribution of birds to transmission dynamics, as suggested by other studies [18, 19]. Since the most important avian reservoirs were associated with open-field habitats and these covered only a small proportion of the study site, it would be interesting to repeat this study in different habitats and with different species assemblages to determine how bird’s contribution to B. burgdorferi transmission cycles varies. Nevertheless, our results underline the fact that multiple host species contribute to the maintenance of B. burgdorferi transmission cycles in nature and thus alternative hosts will be important to consider to ensure optimal effectiveness of control efforts targeted to wildlife reservoirs, such as acaricide treatments or vaccines [2325]. Furthermore, genetic diversity of B. burgdorferi maintained by these alternative hosts [18, 87] will also have to be investigated, since different strains may cause clinically or diagnostically different disease outcomes for humans [88].

This observational field study has some limitations. This portrait of B. burgdorferi transmission patterns is limited to hosts targeted by our sampling design whereas other species, although common in the park and with reservoir capabilities previously shown, were excluded because of their scarcity in our samples. This was the case for birds like American Robins, Blue Jays (Cyanocitta cristata), Common Yellowthroats and Northern Cardinals [18, 22] and for small mammals like Eastern Gray Squirrel (Sciurus carolinensis) and Eastern chipmunk. Also, the duration of host infectiousness could not be accounted for in our study. However, results from laboratory assays suggest temporal variability in the infectiousness of birds for larval ticks [14]. While the long period of infectivity of mice is well documented in some studies [59], more research is needed to explore how this varies in different bird species in natural settings. Finally, the temporality in host availability was not considered. It has been documented that mouse populations exhibit interannual fluctuations [89, 90] and shifts in the seasonality of abundance peaks [91]. Thus birds, whose population sizes and seasonal activity patterns are more stable from year to year, could play a stabilizing role in the B. burgdorferi enzootic cycle in years when mouse populations are at their lowest levels [16] or asynchronous with the seasonality of questing ticks [91]. Finally, we did not detect any pathogens in biopsies taken from birds, although many larvae feeding upon birds were infected with B. burgdorferi or B. miyamotoi. Because B. burgdorferi is not capable of transovarial transmission in I. scapularis ticks [33], infections detected in feeding larvae must have been acquired from the host. There may have been undefined inhibitors in the skin of the birds that somehow inhibited the efficacy of the PCR on skin relative to attached ticks. However it is more likely that the location that the biopsy was taken from influenced the results. For example, we chose this biopsy site because it is minimally invasive when handling animals. However, taking biopsies near the site where ticks attach on the animal but cannot be groomed off (on the head of birds) would be preferable in future studies. It is thought that in infected hosts, B. burgdorferi is attracted to the tick feeding site by tick salivary proteins, and multiplies in the tick feeding lesion (reviewed in [92]). Our findings may be consistent with this as no ticks were found near the biopsy sites we chose, while, biopsies from the heads of birds have been used successfully to detect some genospecies of B. burgdorferi s.l. in Portugal [93]. The processes of dissemination of tick-borne pathogens in bird tissues should be further investigated.

Conclusion

This study illustrates the transmission of B. burgdorferi, A. phagocytophilum and B. miyamotoi within a host community typical of the ecological context in which the geographic range expansion of their vector, I. scapularis, is currently occurring in northeastern North America. It is the first empirically based quantitative assessment of the contribution of mice and breeding birds as reservoirs of the Lyme disease pathogen in North America. Our results support the relevance of considering the role of hosts other than the white-footed mouse in eco-epidemiological studies of tick-borne diseases. The next steps will be to continue acquiring knowledge on the diversity of reservoir hosts of these emerging pathogens across different locations in North America, and to investigate their genetic diversity and potential strain-host associations. This information will be essential for improving management of the risk associated with emerging tick-borne diseases.

Supporting information

S1 File. Original datasets used in the study.

(XLSX)

Acknowledgments

We would like to thank the employees of the Mont-Saint-Bruno National Park for the logistic support during the sampling and all those who participated in the field efforts. Also a special mention to Dominique Dufault for the support with the bird captures.

Data Availability

All relevant data are within the manuscript and its Supporting information files.

Funding Statement

Our work was funded by the Public Health Agency of Canada (PHAC) and a Natural Sciences and Engineering Research Council of Canada (NSERC; https://www.nserc-crsng.gc.ca/) Discovery Grant to P.A.L. (#03793–2014), with fellowship support for A.D. provided by NSERC, the Fonds de recherche Nature et Technology du Québec (FRQNT; https://frq.gouv.qc.ca/) and the Université de Montréal. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the present manuscript.

References

  • 1.Bouchard C, Dibernardo A, Koffi J, Wood H, Leighton P, Lindsay L. Increased risk of tick-borne diseases with climate change. CCDR. 2019;45(4):81–9. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Barbour AG, Bunikis J, Fish D, Hanincová K. Association between body size and reservoir competence of mammals bearing Borrelia burgdorferi at an endemic site in the northeastern United States. Parasit Vectors. 2015. May 30;8(1):299. doi: 10.1186/s13071-015-0903-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Eisen RJ, Kugeler KJ, Eisen L, Beard CB, Paddock CD. Tick-Borne Zoonoses in the United States: Persistent and Emerging Threats to Human Health. ILAR J. 2017. Dec 15;58(3):319–35. doi: 10.1093/ilar/ilx005 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.Barbour AG. Infection resistance and tolerance in Peromyscus spp., natural reservoirs of microbes that are virulent for humans. Semin Cell Dev Biol. 2017; 61:115–22. doi: 10.1016/j.semcdb.2016.07.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.LoGiudice K, Duerr STK, Newhouse MJ, Schmidt KA, Killilea ME, Ostfeld RS. Impact of host community composition on Lyme disease risk. Ecology. 2008. Oct;89(10):2841–9. doi: 10.1890/07-1047.1 [DOI] [PubMed] [Google Scholar]
  • 6.Mather TN, Wilson ML, Moore SI, Ribeiro JMC, Spielman A. Comparing the relative potential of rodents as reservoirs of the Lyme disease spirochete (Borrelia burgdorferi). Am J Epidemiol. 1989;130(1):143–50. doi: 10.1093/oxfordjournals.aje.a115306 [DOI] [PubMed] [Google Scholar]
  • 7.Roy-Dufresne E, Logan T, Simon JA, Chmura GL, Millien V. Poleward expansion of the white-footed mouse (Peromyscus leucopus) under climate change: implications for the spread of Lyme disease. PloS One. 2013;8(11):e80724. doi: 10.1371/journal.pone.0080724 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.Cohen EB, Auckland LD, Marra PP, Hamer SA. Avian migrants facilitate invasions of Neotropical ticks and tick-borne pathogens into the United States. Appl Environ Microbiol. 2015;81(24):8366–78. doi: 10.1128/AEM.02656-15 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Ogden N, Barker I, Francis C, Heagy A, Lindsay L, Hobson K. How far north are migrant birds transporting the tick Ixodes scapularis in Canada? Insights from stable hydrogen isotope analyses of feathers. Ticks Tick-Borne Dis. 2015;6(6):715–20. doi: 10.1016/j.ttbdis.2015.06.004 [DOI] [PubMed] [Google Scholar]
  • 10.Ogden NH, Lindsay L, Hanincová K, Barker I, Bigras-Poulin M, Charron D, et al. Role of migratory birds in introduction and range expansion of Ixodes scapularis ticks and of Borrelia burgdorferi and Anaplasma phagocytophilum in Canada. Appl Environ Microbiol. 2008;74(6):1780–90. doi: 10.1128/AEM.01982-07 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 11.Scott JD, Anderson JF, Durden LA. Widespread dispersal of Borrelia burgdorferi–infected ticks collected from songbirds across Canada. J Parasitol. 2012;98(1):49–59. doi: 10.1645/GE-2874.1 [DOI] [PubMed] [Google Scholar]
  • 12.Kurtenbach K, De Michelis S, Sewell H-S, Etti S, Schäfer SM, Holmes E, et al. The key roles of selection and migration in the ecology of Lyme borreliosis. Int J Med Microbiol. 2002;291:152–4. doi: 10.1016/s1438-4221(02)80029-7 [DOI] [PubMed] [Google Scholar]
  • 13.Brinkerhoff RJ, Bent SJ, Folsom-O’Keefe CM, Tsao K, Hoen AG, Barbour AG, et al. Genotypic diversity of Borrelia burgdorferi strains detected in Ixodes scapularis larvae collected from North American songbirds. Appl Environ Microbiol. 2010;76(24):8265–8. doi: 10.1128/AEM.01585-10 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Ginsberg HS, Buckley P, Balmforth MG, Zhioua E, Mitra S, Buckley FG. Reservoir competence of native North American birds for the Lyme disease spirochete, Borrelia burgdorferi. J Med Entomol. 2005;42(3):445–9. [DOI] [PubMed] [Google Scholar]
  • 15.Newman EA, Eisen L, Eisen RJ, Fedorova N, Hasty JM, Vaughn C, et al. Borrelia burgdorferi Sensu Lato Spirochetes in Wild Birds in Northwestern California: Associations with Ecological Factors, Bird Behavior and Tick Infestation. PLoS One. 2015;10(2):e0118146. doi: 10.1371/journal.pone.0118146 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Rand PW, Lacombe EH, Smith RP, Ficker J. Participation of birds (Aves) in the emergence of Lyme disease in southern Maine. J Med Entomol. 1998. May;35(3):270–6. doi: 10.1093/jmedent/35.3.270 [DOI] [PubMed] [Google Scholar]
  • 17.Richter D, Spielman A, Komar N, Matuschka F-R. Competence of American robins as reservoir hosts for Lyme disease spirochetes. Emerg Infect Dis. 2000;6(2):133. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Brinkerhoff RJ, Folsom-O’Keefe CM, Tsao K, Diuk-Wasser MA. Do birds affect Lyme disease risk? Range expansion of the vector-borne pathogen Borrelia burgdorferi. Front Ecol Environ. 2011;9(2):103–10. [Google Scholar]
  • 19.LoGiudice K, Ostfeld RS, Schmidt KA, Keesing F. The ecology of infectious disease: effects of host diversity and community composition on Lyme disease risk. Proc Natl Acad Sci. 2003;100(2):567–71. doi: 10.1073/pnas.0233733100 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Sonenshine DE, Mather TN. Ecological dynamics of tick-borne zoonoses. New York: Oxford University Press; 1994. [Google Scholar]
  • 21.Giardina AR, Schmidt KA, Schauber EM, Ostfeld RS. Modeling the role of songbirds and rodents in the ecology of Lyme disease. Can J Zool. 2000;78(12):2184–97. [Google Scholar]
  • 22.Loss SR, Noden BH, Hamer GL, Hamer SA. A quantitative synthesis of the role of birds in carrying ticks and tick-borne pathogens in North America. Oecologia. 2016;182(4):947–59. doi: 10.1007/s00442-016-3731-1 [DOI] [PubMed] [Google Scholar]
  • 23.Tsao JI, Wootton JT, Bunikis J, Luna MG, Fish D, Barbour AG. An ecological approach to preventing human infection: vaccinating wild mouse reservoirs intervenes in the Lyme disease cycle. Proc Natl Acad Sci. 2004;101(52):18159–64. doi: 10.1073/pnas.0405763102 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.Pelletier J, Rocheleau J-P, Aenishaenslin C, Beaudry F, Masson GD, Lindsay LR, et al. Evaluation of fluralaner as an oral acaricide to reduce tick infestation in a wild rodent reservoir of Lyme disease. Parasit Vectors. 2020;13(1):1–9. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 25.Keesing F, Ostfeld RS. The tick project: testing environmental methods of preventing tick-borne diseases. Trends Parasitol. 2018;34(6):447–50. doi: 10.1016/j.pt.2018.02.008 [DOI] [PubMed] [Google Scholar]
  • 26.Johnston E, Tsao JI, Muñoz JD, Owen J. Anaplasma phagocytophilum infection in American robins and gray catbirds: an assessment of reservoir competence and disease in captive wildlife. J Med Entomol. 2013;50(1):163–70. doi: 10.1603/me12141 [DOI] [PubMed] [Google Scholar]
  • 27.Trost CN, Lindsay LR, Dibernardo A, Chilton NB. Three genetically distinct clades of Anaplasma phagocytophilum in Ixodes scapularis. Ticks Tick-Borne Dis. 2018;9(6):1518–27. doi: 10.1016/j.ttbdis.2018.07.002 [DOI] [PubMed] [Google Scholar]
  • 28.Scoles GA, Papero M, Beati L, Fish D. A relapsing fever group spirochete transmitted by Ixodes scapularis ticks. Vector Borne Zoonotic Dis. 2001;1(1):21–34. doi: 10.1089/153036601750137624 [DOI] [PubMed] [Google Scholar]
  • 29.Barbour AG, Bunikis J, Travinsky B, Hoen AG, Diuk-Wasser MA, Fish D, et al. Niche partitioning of Borrelia burgdorferi and Borrelia miyamotoi in the same tick vector and mammalian reservoir species. Am J Trop Med Hyg. 2009;81(6):1120–31. doi: 10.4269/ajtmh.2009.09-0208 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 30.Krause PJ, Fish D, Narasimhan S, Barbour AG. Borrelia miyamotoi infection in nature and in humans. Clin Microbiol Infect. 2015;21(7):631–9. doi: 10.1016/j.cmi.2015.02.006 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 31.Wagemakers A, Jahfari S, de Wever B, Spanjaard L, Starink MV, de Vries HJ, et al. Borrelia miyamotoi in vectors and hosts in The Netherlands. Ticks Tick-Borne Dis. 2016;8(3):370–4. doi: 10.1016/j.ttbdis.2016.12.012 [DOI] [PubMed] [Google Scholar]
  • 32.Scott M, Rosen M, Hamer S, Baker E, Edwards H, Crowder C, et al. High-prevalence Borrelia miyamotoi infection among wild turkeys (Meleagris gallopavo) in Tennessee. J Med Entomol. 2014;47(6):1238–42. [DOI] [PubMed] [Google Scholar]
  • 33.Rollend L, Fish D, Childs JE. Transovarial transmission of Borrelia spirochetes by Ixodes scapularis: a summary of the literature and recent observations. Ticks Tick-Borne Dis. 2013. Feb;4(1–2):46–51. doi: 10.1016/j.ttbdis.2012.06.008 [DOI] [PubMed] [Google Scholar]
  • 34.INSPQ. Résultats annuels de surveillance de la maladie de Lyme. 2020 [cited 2022 Jan 28]. https://www.inspq.qc.ca/zoonoses/maladie-de-lyme/resultats-de-surveillance
  • 35.Bouchard C, Beauchamp G, Nguon S, Trudel L, Milord F, Lindsay L, et al. Associations between Ixodes scapularis ticks and small mammal hosts in a newly endemic zone in southeastern Canada: implications for Borrelia burgdorferi transmission. Ticks Tick-Borne Dis. 2011;2(4):183–90. doi: 10.1016/j.ttbdis.2011.03.005 [DOI] [PubMed] [Google Scholar]
  • 36.Dumas A, Bouchard C, Lindsay LR, Ogden NH, Leighton PA. Fine-scale determinants of the spatiotemporal distribution of Ixodes scapularis in Quebec (Canada). Ticks Tick-Borne Dis. 2022;13(1):101833. doi: 10.1016/j.ttbdis.2021.101833 [DOI] [PubMed] [Google Scholar]
  • 37.Linzey AV. Response of the white-footed mouse (Peromyscus leucopus) to the transition between disturbed and undisturbed habitats. Can J Zool. 1989;67(2):505–12. [Google Scholar]
  • 38.Robert M. Second atlas of the breeding birds of southern Québec. Montréal: Regroupement QuébecOiseaux, Canadian Wildlife Service (Environment and Climate Change Canada), and Bird Studies Canada; 2019.
  • 39.Hera IDL, Fontanilles P, Delalande L, Glad A, Sarraude T. Attraction of other Species by Bluethroat Luscinia svecica Song Playback During Autumn Migration: An Experimental Test Using Bird-Ringing Data. Ardeola. 2017. Jan;64(1):91–9. [Google Scholar]
  • 40.Sebastianelli M, Savva G, Moysi M, Kirschel ANG. Tape lures swell bycatch on a Mediterranean island harbouring illegal bird trapping. Biol Lett. 2020. Sep 30;16(9):20200458. doi: 10.1098/rsbl.2020.0458 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 41.Møller AP. Interspecific Response to Playback of Bird Song. Ethology. 1992;90(4):315–20. [Google Scholar]
  • 42.Council NAB. The North American banders’ study guide. North American Banding Council Point Reyes Station, California, USA; 2001. [Google Scholar]
  • 43.Pyle P. Identification guide to North American birds: a compendium of information on identifying, ageing, and sexing "near-passerines" and passerines in the hand. Slate Creek Press; 1997. [Google Scholar]
  • 44.Durden LA, Oliver JH, Kinsey AA. Ticks (Acari: Ixodidae) and spirochetes (spirochaetaceae: spirochaetales) recovered from birds on a Georgia Barrier Island. J Med Entomol. 2001. Mar;38(2):231–6. doi: 10.1603/0022-2585-38.2.231 [DOI] [PubMed] [Google Scholar]
  • 45.Clifford CM, Anastos G, Van der Borght-Elbl A. The larval ixodid ticks of the eastern United States (Acarina-Ixodidae). Entomological Society of America; 1961.
  • 46.Keirans JE, Clifford CM. The genus Ixodes in the United States: a scanning electron microscope study and key to the adults. J Med Entomol. 1978;15(suppl_2):1–38. [DOI] [PubMed] [Google Scholar]
  • 47.Durden LA, Keirans JE, others. Nymphs of the genus Ixodes (Acari: Ixodidae) of the United States: taxonomy, identification key, distribution, hosts, and medical/veterinary importance. Entomological Society of America; 1996.
  • 48.Courtney JW, Kostelnik LM, Zeidner NS, Massung RF. Multiplex real-time PCR for detection of Anaplasma phagocytophilum and Borrelia burgdorferi. J Clin Microbiol. 2004. Jul;42(7):3164–8. doi: 10.1128/JCM.42.7.3164-3168.2004 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 49.Tokarz R, Tagliafierro T, Cucura DM, Rochlin I, Sameroff S, Lipkin WI. Detection of Anaplasma phagocytophilum, Babesia microti, Borrelia burgdorferi, Borrelia miyamotoi, and Powassan virus in ticks by a multiplex real-time reverse transcription-PCR assay. MSphere. 2017;2(2):e00151–17. doi: 10.1128/mSphere.00151-17 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 50.Folmer O, Black M, Wr H, Lutz R, Vrijenhoek R. DNA primers for amplification of mitochondrial Cytochrome C oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol. 1994. Nov 1;3:294–9. [PubMed] [Google Scholar]
  • 51.Team RC. R: A Language and Environment for Statistical Computing [Internet]. Vienna, Austria: R Foundation for Statistical Computing; 2020. https://www.R-project.org/ [Google Scholar]
  • 52.Williams CJ, Moffitt CM. Estimation of pathogen prevalence in pooled samples using maximum likelihood methods and open-source software. J Aquat Anim Health. 2005;17(4):386–91. [Google Scholar]
  • 53.Brooks ME, Kristensen K, van Benthem KJ, Magnusson A, Berg CW, Nielsen A, et al. glmmTMB Balances Speed and Flexibility Among Packages for Zero-inflated Generalized Linear Mixed Modeling. R J. 2017;9(2):378–400. [Google Scholar]
  • 54.Margolis L, Anderson R, Holmes J. Recommended usage of selected terms in ecological and epidemiological parasitology. Bull Can Soc Zool. 1982;13:14. [Google Scholar]
  • 55.Levin M, Levine JF, Apperson CS, Norris DE, Howard PB. Reservoir competence of the rice rat (Rodentia: Cricetidae) for Borrelia burgdorferi. J Med Entomol. 1995;32(2):138–42. doi: 10.1093/jmedent/32.2.138 [DOI] [PubMed] [Google Scholar]
  • 56.Hamer SA, Hickling GJ, Sidge JL, Walker ED, Tsao JI. Synchronous phenology of juvenile Ixodes scapularis, vertebrate host relationships, and associated patterns of Borrelia burgdorferi ribotypes in the midwestern United States. Ticks Tick-Borne Dis. 2012;3(2):65–74. doi: 10.1016/j.ttbdis.2011.11.004 [DOI] [PubMed] [Google Scholar]
  • 57.Cornell Lab of Ornithology. All About Birds. 2022 [cited 2022 Jan 28]. https://www.allaboutbirds.org
  • 58.Dobson AD. History and complexity in tick-host dynamics: discrepancies between ‘real’ and ‘visible’ tick populations. Parasit Vectors. 2014;7(1):231. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 59.Tsao JI. Reviewing molecular adaptations of Lyme borreliosis spirochetes in the context of reproductive fitness in natural transmission cycles. Vet Res. 2009;40(2):1. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 60.Zuur AF, Ieno EN, Walker NJ, Saveliev AA, Smith GM. Mixed effects models and extensions in ecology with R. Springer; 2009. [Google Scholar]
  • 61.Fletcher R, Fortin M-J. Spatial Ecology and Conservation Modeling. Springer; 2018. [Google Scholar]
  • 62.Paradis E, Schliep K. ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R. Bioinformatics. 2019;35:526–8. doi: 10.1093/bioinformatics/bty633 [DOI] [PubMed] [Google Scholar]
  • 63.Hartig F. DHARMa: Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models [Internet]. 2021. https://CRAN.R-project.org/package=DHARMa
  • 64.Kurtenbach K, Hanincová K, Tsao JI, Margos G, Fish D, Ogden NH. Fundamental processes in the evolutionary ecology of Lyme borreliosis. Nat Rev Microbiol. 2006;4(9):660–9. doi: 10.1038/nrmicro1475 [DOI] [PubMed] [Google Scholar]
  • 65.Efford MG, Borchers DL, Mowat G. Varying effort in capture–recapture studies. Methods Ecol Evol. 2013;4(7):629–36. [Google Scholar]
  • 66.Efford M. Habitat masks in the package secr. 2019.
  • 67.Sólymos P, Matsuoka SM, Stralberg D, Barker NK, Bayne EM. Phylogeny and species traits predict bird detectability. Ecography. 2018;41(10):1595–603. [Google Scholar]
  • 68.Farnsworth GL, Pollock KH, Nichols JD, Simons TR, Hines JE, Sauer JR. A removal model for estimating detection probabilities from point-count surveys. The Auk. 2002;119(2):414–25. [Google Scholar]
  • 69.Buckland ST, Anderson DR, Burnham KP, Laake JL, Borchers DL, Thomas L, et al. Introduction to distance sampling: estimating abundance of biological populations. 2001; [Google Scholar]
  • 70.Sólymos P, Matsuoka SM, Bayne EM, Lele SR, Fontaine P, Cumming SG, et al. Calibrating indices of avian density from non-standardized survey data: making the most of a messy situation. Methods Ecol Evol. 2013;4(11):1047–58. [Google Scholar]
  • 71.Harrison XA. A comparison of observation-level random effect and Beta-Binomial models for modelling overdispersion in Binomial data in ecology & evolution. PeerJ. 2015;3:e1114. doi: 10.7717/peerj.1114 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 72.Guillot C, Badcock J, Clow K, Cram J, Dergousoff S, Dibernardo A, et al. Canadian Lyme Sentinel surveillance report, 2019. CCDR. 2020;46(40):354–61. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 73.Dibernardo A, Cote T, Ogden NH, Lindsay LR. The prevalence of Borrelia miyamotoi infection, and co-infections with other Borrelia spp. in Ixodes scapularis ticks collected in Canada. Parasit Vectors. 2014;7(1):183. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 74.Hamer SA, Hickling GJ, Keith R, Sidge JL, Walker ED, Tsao JI. Associations of passerine birds, rabbits, and ticks with Borrelia miyamotoi and Borrelia andersonii in Michigan, USA. Parasit Vectors. 2012;5(1):1–11. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 75.Han S, Hickling GJ, Tsao JI. High Prevalence of Borrelia miyamotoi among Adult Blacklegged Ticks from White-Tailed Deer. Emerg Infect Dis. 2016. Feb;22(2):316–8. doi: 10.3201/eid2202.151218 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 76.Franke J, Hildebrandt A, Dorn W. Exploring gaps in our knowledge on Lyme borreliosis spirochaetes–updates on complex heterogeneity, ecology, and pathogenicity. Ticks Tick-Borne Dis. 2013;4(1):11–25. [DOI] [PubMed] [Google Scholar]
  • 77.Ogden NH, Robbin Lindsay L, Leighton PA. Predicting the rate of invasion of the agent of Lyme disease Borrelia burgdorferi. J Appl Ecol. 2013;50(2):510–8. [Google Scholar]
  • 78.Massung RF, Priestley RA, Miller NJ, Mather TN, Levin ML. Inability of a variant strain of Anaplasma phagocytophilum to infect mice. J Infect Dis. 2003;188(11):1757–63. doi: 10.1086/379725 [DOI] [PubMed] [Google Scholar]
  • 79.Massung RF, Courtney JW, Hiratzka SL, Pitzer VE, Smith G, Dryden RL. Anaplasma phagocytophilum in white-tailed deer. Emerg Infect Dis. 2005;11(10):1604. doi: 10.3201/eid1110.041329 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 80.Radolf JD, Caimano MJ, Stevenson B, Hu LT. Of ticks, mice and men: understanding the dual-host lifestyle of Lyme disease spirochaetes. Nat Rev Microbiol. 2012;10(2):87–99. doi: 10.1038/nrmicro2714 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 81.Parker CM, Miller JR, Allan BF. Avian and habitat characteristics influence tick infestation among birds in Illinois. J Med Entomol. 2017;54(3):550–8. doi: 10.1093/jme/tjw235 [DOI] [PubMed] [Google Scholar]
  • 82.Battaly G, Fish D. Relative importance of bird species as hosts for immature Ixodes dammini (Acari: Ixodidae) in a suburban residential landscape of southern New York State. J Med Entomol. 1993;30(4):740. doi: 10.1093/jmedent/30.4.740 [DOI] [PubMed] [Google Scholar]
  • 83.Magnarelli LA, Stafford KC III, Bladen VC. Borrelia burgdorferi in Ixodes dammini (Acari: Ixodidae) feeding on birds in Lyme, Connecticut, USA. Can J Zool. 1992;70(12):2322–5. [Google Scholar]
  • 84.Dubska L, Literak I, Kocianova E, Taragelova V, Sychra O. Differential role of passerine birds in distribution of Borrelia spirochetes, based on data from ticks collected from birds during the postbreeding migration period in Central Europe. Appl Environ Microbiol. 2009;75(3):596–602. doi: 10.1128/AEM.01674-08 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 85.Sheldon BC, Verhulst S. Ecological immunology: costly parasite defences and trade-offs in evolutionary ecology. Trends Ecol Evol. 1996. Aug;11(8):317–21. doi: 10.1016/0169-5347(96)10039-2 [DOI] [PubMed] [Google Scholar]
  • 86.Scharf WC. Immature ticks on birds: temporal abundance and reinfestation. Northeast Nat. 2004;11(2):143–50. [Google Scholar]
  • 87.Mechai S, Margos G, Feil EJ, Barairo N, Lindsay LR, Michel P, et al. Evidence for host-genotype associations of Borrelia burgdorferi sensu stricto. PloS One. 2016;11(2):e0149345. doi: 10.1371/journal.pone.0149345 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 88.Ogden NH, Margos G, Aanensen DM, Drebot MA, Feil EJ, Hanincová K, et al. Investigation of genotypes of Borrelia burgdorferi in Ixodes scapularis ticks collected during surveillance in Canada. Appl Environ Microbiol. 2011. May;77(10):3244–54. doi: 10.1128/AEM.02636-10 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 89.Elias SP, Witham JW, Hunter ML. Peromyscus leucopus abundance and acorn mast: population fluctuation patterns over 20 years. J Mammal. 2004;85(4):743–7. [Google Scholar]
  • 90.Wang G, Wolff JO, Vessey SH, Slade NA, Witham JW, Merritt JF, et al. Comparative population dynamics of Peromyscus leucopus in North America: influences of climate, food, and density dependence. Popul Ecol. 2009;51(1):133–42. [Google Scholar]
  • 91.Wang H-H, Grant W, Teel P, Hamer S. Simulation of climate-tick-host-landscape interactions: Effects of shifts in the seasonality of host population fluctuations on tick densities. J Vector Ecol. 2015;40(2):247–55. doi: 10.1111/jvec.12161 [DOI] [PubMed] [Google Scholar]
  • 92.Kurokawa C, Lynn GE, Pedra JHF, Pal U, Narasimhan S, Fikrig E. Interactions between Borrelia burgdorferi and ticks. Nat Rev Microbiol. 2020. Oct;18(10):587–600. doi: 10.1038/s41579-020-0400-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 93.Norte AC, Lopes de Carvalho I, Núncio MS, Araújo PM, Matthysen E, Albino Ramos J, et al. Getting under the birds’ skin: tissue tropism of Borrelia burgdorferi s.l. in naturally and experimentally infected avian hosts. Microb Ecol. 2020. Apr;79(3):756–69. doi: 10.1007/s00248-019-01442-3 [DOI] [PubMed] [Google Scholar]

Decision Letter 0

Brian Stevenson

20 Dec 2021

PONE-D-21-34840Transmission patterns of tick-borne pathogens among birds and rodents in a forested park in southeastern CanadaPLOS ONE

Dear Dr. Dumas,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses each of the points raised during the review process.

Please submit your revised manuscript by Feb 03 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Brian Stevenson, Ph.D.

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at 

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf.

2.We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide.

3. We note that Figure 1 in your submission contain [map/satellite] images which may be copyrighted. All PLOS content is published under the Creative Commons Attribution License (CC BY 4.0), which means that the manuscript, images, and Supporting Information files will be freely available online, and any third party is permitted to access, download, copy, distribute, and use these materials in any way, even commercially, with proper attribution. For these reasons, we cannot publish previously copyrighted maps or satellite images created using proprietary data, such as Google software (Google Maps, Street View, and Earth). For more information, see our copyright guidelines: http://journals.plos.org/plosone/s/licenses-and-copyright.

We require you to either (1) present written permission from the copyright holder to publish these figures specifically under the CC BY 4.0 license, or (2) remove the figures from your submission:

a) You may seek permission from the original copyright holder of Figure 1 to publish the content specifically under the CC BY 4.0 license.  

We recommend that you contact the original copyright holder with the Content Permission Form (http://journals.plos.org/plosone/s/file?id=7c09/content-permission-form.pdf) and the following text:

“I request permission for the open-access journal PLOS ONE to publish XXX under the Creative Commons Attribution License (CCAL) CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/). Please be aware that this license allows unrestricted use and distribution, even commercially, by third parties. Please reply and provide explicit written permission to publish XXX under a CC BY license and complete the attached form.”

Please upload the completed Content Permission Form or other proof of granted permissions as an "Other" file with your submission.

In the figure caption of the copyrighted figure, please include the following text: “Reprinted from [ref] under a CC BY license, with permission from [name of publisher], original copyright [original copyright year].”

b) If you are unable to obtain permission from the original copyright holder to publish these figures under the CC BY 4.0 license or if the copyright holder’s requirements are incompatible with the CC BY 4.0 license, please either i) remove the figure or ii) supply a replacement figure that complies with the CC BY 4.0 license. Please check copyright information on all replacement figures and update the figure caption with source information. If applicable, please specify in the figure caption text when a figure is similar but not identical to the original image and is therefore for illustrative purposes only.

The following resources for replacing copyrighted map figures may be helpful:

USGS National Map Viewer (public domain): http://viewer.nationalmap.gov/viewer/

The Gateway to Astronaut Photography of Earth (public domain): http://eol.jsc.nasa.gov/sseop/clickmap/

Maps at the CIA (public domain): https://www.cia.gov/library/publications/the-world-factbook/index.html and https://www.cia.gov/library/publications/cia-maps-publications/index.html

NASA Earth Observatory (public domain): http://earthobservatory.nasa.gov/

Landsat: http://landsat.visibleearth.nasa.gov/

USGS EROS (Earth Resources Observatory and Science (EROS) Center) (public domain): http://eros.usgs.gov/#

Natural Earth (public domain): http://www.naturalearthdata.com/.

4.  Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: In this manuscript, the authors investigate the abundance of Borrelia burgdorferi, Borrelia miyamotoi, and Anaplasma phagocytophilum in avian and rodent species in Mont Saint-Bruno National Park to compare the contribution of each species to pathogen transmission as reservoir species and to identify factors contributing to tick infestation and pathogen infectivity in the surveyed species. The authors conclude that while rodents mostly contribute to the reservoir species in the park, birds also serve as reservoir species providing importance for further study of birds as reservoirs for B. burgdorferi and B. miyamotoi. The authors also identify risk factors in avian and rodent populations (sex, habitat, foraging behavior) that may contribute to tick infestation and B. burgdorferi infectivity. I have the following relatively minor critiques concerning the manuscript:

The second paragraph (lines 60-64) is underdeveloped and would be improved with more detail. I think it would be nice to elaborate on other rodents identified as reservoir species, examples of susceptibility of infection, infectious period, and/or ubiquity in ecosystems that are mentioned in this paragraph. As it stands, this paragraph is only two sentences.

Figure 1 may be improved if it could be presented in higher resolution. My full-size print of the figure is very blurry, but I can see the sampling sites well enough.

In the “Diagnostic testing for tick-borne pathogens” section (starting at line 170) there is no reference or sequences provided for primers used for the real-time PCR assay used to screen for pathogens. These may be useful to other groups looking to study pathogen prevalence. Furthermore, there is no mention of where biopsies were sampled on birds and mice. For instance, it would be interesting to know if the bird biopsies taken from birds with infected larvae (mentioned lines 336-337) were taken near the tick feeding site or distal to the site. This could have some implication on potential pathogen dissemination defects in birds.

In lines 341-342, I think the authors meant to say “the numbers in parenthesis indicate number of ticks tested” instead of brackets. It is not specifically mentioned what the numbers in brackets are, but I assume this is the range in percentage?

Reviewer #2: Comments also included as a separate document.

Major Comments

Dumas et al. describe the role of small mammals and birds as tick hosts and tick-borne pathogen reservoirs in southeastern Canada. Most notably, they found that five bird species can contribute 18% of the estimated transmissions of Borrelia burgdorferi to Ixodes scapularis larvae feeding on the birds. In addition, they also estimated that the reservoir potential of white-footed mice (Peromyscus leucopus) was 82% of estimated transmissions.

The manuscript is well-written and shows a lot of promise to improve the field of tick-borne disease ecology, specifically in Canada. The paper could improve on clarifying their methods and statements overall, which I included in the Minor Comments.

Not necessarily a weakness in the study itself, but I was wondering if the authors had a reason for only trapping and mist netting during a specific time of the year. Presumably, these animals are pretty active throughout much of the year outside of the summer season. Would other tick species or life stages be found on these animals during the spring or fall, thus possibly contributing other pathogens at other time points of the year? Are the models and statistics held true outside of the months where trapping and mist netting occurred? I saw that the authors conducted tick dragging May-October, but tick dragging does not seem to result in a high diversity of tick species compared to ticks found on animals and is not a replacement for trapping or mist-netting animals to find ticks.

Interestingly, the authors did not detect any pathogens in the bird biopsies, but found that the larval ticks were infected with pathogens. While the Discussion noted that the birds can possibly clear the infection, this still does not explain how the ticks were infected with the pathogen if the bird is cleared of infection by the time it was sampled. Larval ticks only feed for a few days, so is it possible that birds are clearing pathogens before the larvae are replete? Do the authors have data showing that more fully-engorged ticks have a higher pathogen load compared to a tick that just started feeding? This could provide strong evidence for their theory, where as a host is clearing the infection, ticks that fed sooner would be expected to have a higher pathogen load compared to those that started feeding later.

Furthermore, I do notice that more emphasis is given to the data on birds, while white-footed mice and other small mammals do not seem to garner the same level of attention. While I do agree that birds have been understudied as a tick host/tick-borne pathogen reservoir, I still think that the small mammal component is informative. If your emphasis is on birds, then the small mammal component should be removed to make the paper more focused and succinct. I personally think that both should be kept in the paper, but they should also be equally represented.

Regardless, I commend the authors’ efforts for their long-term field work and for creating sophisticated models to determine host risk factors for tick infestation and pathogen infectivity as well as the reservoir potential. I certainly learned something new and I know that this work will be important as we continue to progress our knowledge of hosts for ticks and reservoirs of tick-borne pathogens.

Minor Comments

• Line 33: Add sample sizes into the abstract.

• Line 36: There doesn’t seem to be any information on the small mammal infestation and infection data or the reservoir potential value in the abstract. Was there a reason to exclude it or could you add it to the abstract to make it more representative of your data?

• Lines 54-55: Diseases should be lowercased..

• Lines 54-55: The last part of this statement (“…caused by Borrelia miyamotoi”) makes it sound like all of the diseases you listed are caused by B. miyamotoi. Maybe instead you could list the relevant pathogens that cause the disease in parentheses after the disease is mentioned.

• Line 88 (and elsewhere): I think common bird names should be lowercased unless they are named after someone or a location. In addition, you might want to consider putting the scientific names of birds in parentheses after the common name is listed the first time. This was done for the small mammals in the Introduction and Results sections, so I think it should also be done for the birds for consistency.

• Lines 127-130: What were the methods for tick dragging and storing the ticks before pathogen testing? Are they included in another reference? If so, the reference should be added. Figure 1 is also listed in the paragraph, but I don’t see the caption for it anywhere in the review packet.

• Lines 132-143: I noticed that the Ethics Statement of the review packet included more information about trapping and bird mist netting and this information should be added to the manuscript itself as well.

• Lines 141-143: Do you think DNA degradation of your sample is possible if the sample is kept in ethanol and at room temperature for long periods of time?

• Line 153: When luring the birds to the nets, do you think you might have biased your mist netting results to specific species? Do you suspect that using sound lures would decrease capture success of other bird species that were not used as playback?

• Lines 173-174: “… and a subset of up to 30 nymphs per infested host species for nymphs collected from birds.” What about the samples from mice?

• Line 175: “Unfed larvae from individual hosts…” Do you mean that the larvae were pooled all together for pathogen testing? Or do you mean that you unfed larvae from the same individual/host were pooled together?

• Lines 180-182: Gene names should be italicized (23S, msp2, ospA/flab). “spp.” should not be italicized. Add a comma before “respectively.”

• Lines 182-184: The way the sentence is structured currently, it sounds like you tested samples from 2016 even though the study took place in 2017 and 2018. I would rephrase it so that you say you didn’t test any samples in 2018 since you did not find any positive samples in your first year of study in 2017. That being said, was there a reason why you didn’t test samples from both years? Wouldn’t results from 2017 be more or less independent of what you might find in 2018? In other words, what you find in 2017 is not necessarily representative of what you find in 2018.

• Lines 188-194: Instead of Chi-square analyses, would it be more accurate to test for significant differences using a model, especially since you are testing various origins. The origins could be your covariates and the presence/absence of the pathogen could be the outcome of the model.

• Lines 230-231: If you used any R packages for your statistical analyses, I recommend adding and referencing those packages in the manuscript.

• Lines 230: The sentence structure makes it sound like the DHARMa package conducts Moran’s I tests, but I don’t think it’s used for that. In this case, I would break up the sentence into two sentences and for the former, list the package you used for Moran’s I (see previous comment). R packages should also be italicized.

• Lines 253-254: Is it possible to assume that tick attachment between recaptures could happen, even within 24 hours? If all ticks were removed and you found ticks the next day, would this event be considered independent and could thusly be included in your analyses?

• Line 261: “The white-footed mouse…”

• Line 317: “Ticks were found on 245 (28.86%) birds, with the majority of these ticks…”

• Table 2: I may have missed this in the manuscript, but why are some of the densities not calculated for some birds? They either have a blank or a dash in them, but multiple birds were captured. Would it also be possible to have a similar table for the small mammal captures to succinctly describe those results as well?

• Line 341: Similar to a previous comment I made, were unfed ticks tested in pools per host? Or were all unfed ticks pooled together? I’m assuming the former, but this should be clarified here and in the main text of the manuscript.

• Lines 341-342: I’m not sure if this is PLOS One’s guidelines, but should this information go with the title as a caption? I feel like I would have understood the table better had I known this information before reading the table.

• Lines 344-346: The sentence sounds a little awkward towards the end, so I would suggest something like the following: We tested 2210 questing nymphs (63.52% of the total questing nymphs collected) and found an overall prevalence of 9.10% for B. burgdorferi across the three years of the study.

• Line 349: “We tested all 2257 I. scapularis feeding larvae…”

• Lines 370-371: What did open-habitat bird species carry more of? Ticks overall? Or certain life stages of ticks?

• Lines 370-372: The sentence is a little confusing, but based on my interpretation of the sentence, I think the sentence should be broken up into two separate sentences. One sentence compares open-habitat bird species and forest species, and the second sentence describes ground-nesting species and species that nest in trees and shrubs.

• Lines 376-378: “For mice, sex of the host was the only intrinsic factor to significantly affect the number of ticks infesting hosts, where males…”

• Table 4: Are some of the columns misaligned? Things like “Intercept,” “Predicted density of questing larvae,” and “Number of engorged larvae” look like they should be aligned with the rest of the table. I would also suggest moving the Infectivity Models to a separate table. When you reference them in the paper, it can get a little confusing as to which table you are referencing. I also almost missed the “Infectivity models” header when reading the table the first time. So either make two separate tables or make the header more noticeable.

• Line 405: “… but captured insufficient animals…”

• Table 5: I think it might look a little better if you somehow moved the family names and associated data up as a subheader and then list all of the bird species under that family. Then you have another subheader with the next family and list all those individuals under that family and so on and so forth.

• Lines 430-432: This was only briefly mentioned in the Results and B. miyamotoi results were combined for both small mammals and birds – I think finding the first report of B. miyamotoi in larvae from birds is super neat and should be emphasized in a separate sentence in the Results, if possible. That being said, to make the jump that B. miyamotoi circulates in bird populations at the study site might be a reach considering that none of the bird biopsies came up positive for the pathogen.

• Line 434: “most prevalent tick-borne pathogen, B. burgdorferi.”

• Lines 461-465: This sentence can probably be separated into two sentences.

• Lines 477-478: Again, can we really say this if the birds tested negative? Based on the explanation in lines 484-487, it sounds like birds can clear and infection during a blood meal, but like my previous comment mentioned, larval ticks only feed for a few days at a time. Are there references that note how quickly birds can clear infection and if this differs per species?

• Lines 504-506: I actually thought B. burgdorferi seemed pretty common in your ticks from birds, with infectivity rates between 11-20%. Even if the birds were not positive themselves, the ticks coming from the birds show that the pathogen is pretty prevalent.

• Lines 512-515: I think “and” is the wrong transition word. Maybe using “therefore” or “and thusly” might be better.

• Lines 520-525: This entire sentence is rather wordy and gets long-winded when trying to read it – could there be a way to shorten it or to break it up into a couple of sentences?

• Lines 534-536: Do you happen to have a reference supporting the claim about different energy balances between male and female mice and how it contributes to different immune suppression mechanisms?

• References: Some species/group names should be properly formatted (italicized, capitalized, etc.). See references 28, 35, and 64. Those were the ones I quickly found, but another review might be a good idea.

Reviewer #3: Dumas et al. conducted a study of tick-borne pathogens among birds and rodents in a forested park near Montreal, Quebec, Canada. This park is visited by many people and reports of B.burgdorferi transmission has been documented here. This study was conducted between 2016 and 2018 collecting questing ticks as well as ticks found on captured birds and rodents. Molecular analyses were conducted to determine if the ticks or vertebrate hosts were positive for Anaplasma phagocytophilum, Borrelia (Borreliella) burgdorferi, and Borrelia miyamotoi. The study was focused on determining the role of birds as potential reservoir hosts of these pathogens and estimated that within this park 5 bird species, identified as reservoir hosts, likely contributed to one-fifth of the B. burgdorferi infected nymphs with the remainder contributed by the white-footed mouse. This study identifies I. scapularis infestations in birds and indicates the ability of birds to contribute to the enzootic maintenance of B. burgdorferi in North America.

Overall, the study was well designed and executed. I only have a few clarification questions regarding methodology which may require further elaboration in the text.

Line 174-175 I assume engorgement was determined visually

Line 271-276 Were the point counts conducted both visually and aurally? How were the bird calls identified? Were recordings made and compared to sonograms or did someone identify the birds by ear? Were the point counts conducted at the same time of day each time or at different times?

The writing was good overall and I have only a few comments:

I noticed that occasionally there would be long, cumbersome sentences where the impact of the sentence would be enhanced by breaking it up into multiple sentences. For example lines 42-45, 107-112, 460-465, 591-595.

I am not sure if PLoS has an opinion on the capitalization of common names of birds since there is some debate about whether or not that is appropriate. However, please be consistent throughout the manuscript text and tables when capitalizing these names.

Lines 180 and 182 have gene names that should be italicized

For R packages, please indicate the version used if available

Line 261 "White-footed mouse" is capitalized but all other references in the text have

"white" as lower case

In table 2, please define what "infestation intensity" is.

Lines 341-342 The numbers that is referred to here is in parentheses whereas the confidence intervals are in brackets

Line 344 2210 needs a comma: 2,210

Line 349 2257 and 1226 also need commas: 2,257 and 1,226

Line 405 capture should be captured

Table 5 Under the 'Infestation' heading the 'No' needs a period 'No.'

Lines 446-450 It is not necessary to include this unpublished information and these lines could be removed.

Line 473 White-tailed deer may also be a reservoir for B. miyamotoi and might be worth mentioning here or considering for future studies. Han, S., Hickling, G. J., & Tsao, J. I. (2016). High prevalence of Borrelia miyamotoi among adult blacklegged ticks from white-tailed deer. Emerging infectious diseases, 22(2), 316.

The conclusions were sound and supported by the data but I do have one question concerning a statement made in lines 552-555. The authors state that there were twice the amount of larvae carried by birds compared to white-footed mice but I can't seem to find which data support that in the results.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

Reviewer #3: No

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2022 Apr 7;17(4):e0266527. doi: 10.1371/journal.pone.0266527.r002

Author response to Decision Letter 0


3 Feb 2022

Dear Dr Stevenson,

Thank you for considering our manuscript. Please find below our response to the specific comments raised.

Comments by Academic editor:

“If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. “

Protocols will be available by contacting the laboratory directly.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf.

We revised the manuscript to ensure that it met PLOS ONE's style requirements.

2. We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide.

We wish to make a change to the data availability statement: we meant that the data are accessible as supplementary material (S1 File), not through an online repository.

3. We note that Figure 1 in your submission contain [map/satellite] images which may be copyrighted.

(…) supply a replacement figure that complies with the CC BY 4.0 license. Please check copyright information on all replacement figures and update the figure caption with source information. If applicable, please specify in the figure caption text when a figure is similar but not identical to the original image and is therefore for illustrative purposes only.

Caption corrected to mention the OpenStreetMap copyright (top left insert) and ecoforestry/landcover data (right and down left inserts). Original ecoforestry/landcover data available at https://www.foretouverte.gouv.qc.ca/ and the license is CC-BY 4.0. (see https://www.donneesquebec.ca/recherche/fr/dataset/resultats-d-inventaire-et-carte-ecoforestiere)

4. Please review your reference list to ensure that it is complete and correct.

We have revised the reference list.

Comments by Reviewer #1:

1.1. The second paragraph (lines 60-64) is underdeveloped and would be improved with more detail. I think it would be nice to elaborate on other rodents identified as reservoir species, examples of susceptibility of infection, infectious period, and/or ubiquity in ecosystems that are mentioned in this paragraph. As it stands, this paragraph is only two sentences.

Modifications made.

1.2. Figure 1 may be improved if it could be presented in higher resolution. My full-size print of the figure is very blurry, but I can see the sampling sites well enough.

Resolution of the figure has been increased to 300 dpi, which now meets PlosOne requirements.

In the “Diagnostic testing for tick-borne pathogens” section (starting at line 170) there is no reference or sequences provided for primers used for the real-time PCR assay used to screen for pathogens. These may be useful to other groups looking to study pathogen prevalence. Furthermore, there is no mention of where biopsies were sampled on birds and mice. For instance, it would be interesting to know if the bird biopsies taken from birds with infected larvae (mentioned lines 336-337) were taken near the tick feeding site or distal to the site. This could have some implication on potential pathogen dissemination defects in birds.

We are confused by this comment as the primers and references for same were already provided in text as follows: ”Briefly, extracted DNA was screened using a duplex real-time PCR assay targeting the 23S and msp2 genes of Borrelia spp. and A. phagocytophilum respectively (Courtney et al., 2004). Borrelia-positive samples were subsequently tested for B. burgdorferi and B. miyamotoi using a second ospA/flab duplex assay (Tokarz et al., 2017).” Please let us know if we are missing something.

However, we noticed while reviewing that we did not include the primers used for mice species identification. We thus added this information in the manuscript (Page 10, Line 216).

The information about the location of biopsy collection on birds (wing: prepatagial membrane) and mice (ear) can be found in Materials and Methods, section Field. We added the location of ticks on the body of the hosts in the Results section, and more explanations for our pathogen testing results in bird biopsies in the discussion.

1.3. In lines 341-342, I think the authors meant to say “the numbers in parenthesis indicate number of ticks tested” instead of brackets. It is not specifically mentioned what the numbers in brackets are, but I assume this is the range in percentage?

Modification made.

Comments by Reviewer #2:

Major Comments:

2.1. Not necessarily a weakness in the study itself, but I was wondering if the authors had a reason for only trapping and mist netting during a specific time of the year. Presumably, these animals are pretty active throughout much of the year outside of the summer season. Would other tick species or life stages be found on these animals during the spring or fall, thus possibly contributing other pathogens at other time points of the year? Are the models and statistics held true outside of the months where trapping and mist netting occurred? I saw that the authors conducted tick dragging May-October, but tick dragging does not seem to result in a high diversity of tick species compared to ticks found on animals and is not a replacement for trapping or mist-netting animals to find ticks.

We aimed to sample during the main period of the year when hosts are abundant. For birds, that is from early summer after birds arrive after their annual northward migration, to late summer after which they leave on their annual southward migration. Small mammals are active throughout the summer season and are particularly abundant in our area in late summer, when the juveniles of the year are also present in the population (Jutras, 2005). Since it was not logistically possible for us to deploy the effort for trapping and mistnetting at the same time, we placed the bird and rodent capture periods in sequence, during these periods of hosts activity. The period during which sampling occurred also covered the main period of immature tick activity in this site that we have been studying for the past 15 years (e.g. Bouchard et al., 2011; Dumas et al., 2022; Ripoche et al., 2018). This is clarified (Page 7, Lines 149-150). Furthermore, during our studies we have found other tick species that can transmit B. burgdorferi (I. muris, I. marxi and I. angustus), but as in our study here (where the only ticks of other species found were two I. muris ticks), they are very uncommon compared to I. scapularis, and it is unlikely they are contributing greatly to pathogen transmission on the site. Consequently, it is also very unlikely that there are patterns of tick parasitism of hosts occurring outside the sampling period that would impact the generalisability of the results during the sampling period.

2.2. Interestingly, the authors did not detect any pathogens in the bird biopsies, but found that the larval ticks were infected with pathogens. While the Discussion noted that the birds can possibly clear the infection, this still does not explain how the ticks were infected with the pathogen if the bird is cleared of infection by the time it was sampled. Larval ticks only feed for a few days, so is it possible that birds are clearing pathogens before the larvae are replete? Do the authors have data showing that more fully-engorged ticks have a higher pathogen load compared to a tick that just started feeding? This could provide strong evidence for their theory, where as a host is clearing the infection, ticks that fed sooner would be expected to have a higher pathogen load compared to those that started feeding later.

We added to the discussion possible explanations for the lack of positive bird biopsy samples (Page 48, Lines 645-658). This is not to be confused with the explanation that some birds might clear the infection from ticks that have fed on them. We believe this to be an immune mechanism specific to certain species only, a theory we advance since, for these few species, we found engorged larvae and nymphs on the birds, but none were infected (see Discussion). It would be interesting to study how birds of different species may acquire immunity to B. burgdorferi, resulting in changes in host-to-tick transmission efficiency, but we don’t have the detailed data for this in our studies to date.

2.3. Furthermore, I do notice that more emphasis is given to the data on birds, while white-footed mice and other small mammals do not seem to garner the same level of attention. While I do agree that birds have been understudied as a tick host/tick-borne pathogen reservoir, I still think that the small mammal component is informative. If your emphasis is on birds, then the small mammal component should be removed to make the paper more focused and succinct. I personally think that both should be kept in the paper, but they should also be equally represented.

We have made some choices in the presentation of the data (e.g., Table 2 dedicated to birds), due to the great diversity of bird species encountered in our sample. However, all data for mice and other small mammals are also presented in the Results section. Also, it is true that the results for birds are discussed extensively in the article. This is due to the greater novelty of these results and the objective of the study to compare the role of these alternative hosts to the already recognized role of rodents such as the white-footed mouse. Nevertheless, we have taken care to better represent the results of the two host groups through additions throughout the paper (see Abstract, Introduction and Discussion).

Minor Comments:

2.4. Line 33: Add sample sizes into the abstract.

Added.

2.5. Line 36: There doesn’t seem to be any information on the small mammal infestation and infection data or the reservoir potential value in the abstract. Was there a reason to exclude it or could you add it to the abstract to make it more representative of your data?

Added.

2.6. Lines 54-55: Diseases should be lowercased.

The word “Diseases” was not present in lines 54-55. Correction was made though from “relapsing Borreliosis caused by Borrelia miyamotoi” to “Borrelia miyamotoi disease” accordingly to CDC nomenclature (page 3, line 56).

2.7. Lines 54-55: The last part of this statement (“…caused by Borrelia miyamotoi”) makes it sound like all of the diseases you listed are caused by B. miyamotoi. Maybe instead you could list the relevant pathogens that cause the disease in parentheses after the disease is mentioned.

Modification made (see previous point).

2.8. Line 88 (and elsewhere): I think common bird names should be lowercased unless they are named after someone or a location. In addition, you might want to consider putting the scientific names of birds in parentheses after the common name is listed the first time. This was done for the small mammals in the Introduction and Results sections, so I think it should also be done for the birds for consistency.

Scientific names have been added to the first mention of each bird species. However, common bird names were kept capitalised, in accordance with the guidelines of the American Ornithological Society (https://americanornithology.org/nacc/guidelines-for-english-bird-names/).

2.9. Lines 127-130: What were the methods for tick dragging and storing the ticks before pathogen testing? Are they included in another reference? If so, the reference should be added.

Reference added.

Figure 1 is also listed in the paragraph, but I don’t see the caption for it anywhere in the review packet.

The caption for Figure 1 is in the manuscript text, next to the paragraph where it is first mentioned, in accordance with PLOS ONE submission guidelines “Figure captions must be inserted in the text of the manuscript, immediately following the paragraph in which the figure is first cited (read order). Do not include captions as part of the figure files themselves or submit them in a separate document.” https://journals.plos.org/plosone/s/submission-guidelines#loc-style-and-format

2.10. Lines 132-143: I noticed that the Ethics Statement of the review packet included more information about trapping and bird mist netting and this information should be added to the manuscript itself as well.

Added.

2.11. Lines 141-143: Do you think DNA degradation of your sample is possible if the sample is kept in ethanol and at room temperature for long periods of time?

Preservation of samples in ethanol for PCR analyses is known to be sufficient for short-term storage (Carew et al., 2018; Stein et al., 2013). Over the longer term, gradual degradation of DNA does occur, resulting in decreasing concentrations in samples over years of storage (Barnes et al., 2000). However, the detection limit is very low for the RT-PCR techniques we use, and the storage period is not long enough (approximately 1 year, information added in Materials and Methods, section Diagnostic testing for tick-borne pathogens) for DNA concentrations to fall below the detection limit.

2.12. Line 153: When luring the birds to the nets, do you think you might have biased your mist netting results to specific species? Do you suspect that using sound lures would decrease capture success of other bird species that were not used as playback?

The bird species called with playback were based on those detected during the point counts. Thus, playbacks were used equally for all species detected per site. Also, we do not believe that this technique should decrease the capture success of non-target species. On the contrary, several studies have found that in addition to increasing the capture success of target species, the use of playbacks while using mist nests could also favor capture (Hera et al., 2017; Sebastianelli et al., 2020), or response (Møller, 1992) of other species, not targeted by the playback. This is clarified (Page 8; lines 173-175). Indeed, it has been suggested that birds may use song features to make a general assessment of the quality of a site, such as the presence of food resources when the parents are feeding the young (Sebastianelli et al., 2020). Furthermore, since mist netting was conducted during the nesting season, most of the birds have already settled in their territories. The potential effects of interspecific competition already occurred during territory settlement prior to our mist netting sessions and using playback to stimulate a bird's territorial response should not repel its competitors (who would already have chosen territories elsewhere). By the second capture period, playbacks were much less effective, as birds were no longer defending territories.

2.13. Lines 173-174: “… and a subset of up to 30 nymphs per infested host species for nymphs collected from birds.” What about the samples from mice?

We did not test nymphs collected from mice and other small mammals. This is clarified (Page 9, Lines 202-203).

2.14. Line 175: “Unfed larvae from individual hosts…” Do you mean that the larvae were pooled all together for pathogen testing? Or do you mean that you unfed larvae from the same individual/host were pooled together?

Unfed larvae from the same individual host were pooled together. This is clarified (Page 9 Lines 204-205).

Lines 180-182: Gene names should be italicized (23S, msp2, ospA/flab). “spp.” should not be italicized. Add a comma before “respectively.”

Modifications made.

2.15. Lines 182-184: The way the sentence is structured currently, it sounds like you tested samples from 2016 even though the study took place in 2017 and 2018. I would rephrase it so that you say you didn’t test any samples in 2018 since you did not find any positive samples in your first year of study in 2017.

Modification made.

That being said, was there a reason why you didn’t test samples from both years? Wouldn’t results from 2017 be more or less independent of what you might find in 2018? In other words, what you find in 2017 is not necessarily representative of what you find in 2018.

In fact, we decided not to take the biopsies at all in 2018 (clarification made; Page 10, lines 213-214). We found our technique to be ineffective for the detection of pathogens in the tissue we collected (please see the explanations added in Discussion; Page 48, Lines 645-658) and avoided taking these quite invasive samples for ethics reasons.

2.16. Lines 188-194: Instead of Chi-square analyses, would it be more accurate to test for significant differences using a model, especially since you are testing various origins. The origins could be your covariates and the presence/absence of the pathogen could be the outcome of the model.

As we compared only between engorged larvae and questing nymphs (we clarified this in Page 10, Line 223), we do think that the Chi-square tests are appropriate. Had we been comparing amongst multiple sources for the ticks, a logistic regression model would have been more appropriate.

2.17. Lines 230-231: If you used any R packages for your statistical analyses, I recommend adding and referencing those packages in the manuscript.

All the packages used and versions are now cited and referenced.

2.18. Lines 230: The sentence structure makes it sound like the DHARMa package conducts Moran’s I tests, but I don’t think it’s used for that. In this case, I would break up the sentence into two sentences and for the former, list the package you used for Moran’s I (see previous comment). R packages should also be italicized.

Corrections made.

2.19. Lines 253-254: Is it possible to assume that tick attachment between recaptures could happen, even within 24 hours? If all ticks were removed and you found ticks the next day, would this event be considered independent and could thusly be included in your analyses?

It can certainly be assumed that tick attachment can occur within 24 hours. However, given that immature ticks remain attached to the host for a few days, tick abundance on a particular animal will likely be associated with the time elapsed since the last time it was captured (and had all of its ticks removed by the research team). In other words, the infestation density for a single individual is not independent of each successive recapture event. Furthermore, we believe that this lack of independence will be more pronounced in rodents than in birds. Indeed, rodents from the same site could be recaptured during the same week, whereas for birds, successive recapture periods at the same sites were spaced several weeks apart. So, considering recaptures in the models would at least have required the addition of random effects at the host individual level. We explored this possibility but given that we already had a random effect for the capture site (necessary to account for spatial dependence and repeated measurements at sites), adding a second random effect made the models too complex and caused convergence problems. We therefore decided to exclude recaptures, in order to keep the models functional and avoid bias.

2.20. Line 261: “The white-footed mouse…”

Correction made.

2.21. Line 317: “Ticks were found on 245 (28.86%) birds, with the majority of these ticks…”

Correction made.

2.22. Table 2: I may have missed this in the manuscript, but why are some of the densities not calculated for some birds? They either have a blank or a dash in them, but multiple birds were captured. Would it also be possible to have a similar table for the small mammal captures to succinctly describe those results as well?

Because densities were obtained from point counts, not from captures. So, in the case of birds for which we have captures but no density estimates, that means we could not detect these species during the point counts. We are therefore unable to provide density estimates in these cases.

2.23. Line 341: Similar to a previous comment I made, were unfed ticks tested in pools per host? Or were all unfed ticks pooled together? I’m assuming the former, but this should be clarified here and in the main text of the manuscript.

Unfed ticks were tested in pools per host. This is clarified (Page 30; line 386).

2.24. Lines 341-342: I’m not sure if this is PLOS One’s guidelines, but should this information go with the title as a caption? I feel like I would have understood the table better had I known this information before reading the table.

We think this information is part of the table legend and thus we placed it below, following PLOS One’s guidelines: “Tables require a label (e.g., “Table 1”) and brief descriptive title to be placed above the table. Place legends, footnotes, and other text below the table.“

2.25. Lines 344-346: The sentence sounds a little awkward towards the end, so I would suggest something like the following: We tested 2210 questing nymphs (63.52% of the total questing nymphs collected) and found an overall prevalence of 9.10% for B. burgdorferi across the three years of the study.

Modification made.

2.26. Line 349: “We tested all 2257 I. scapularis feeding larvae…”

Correction made.

2.27. Lines 370-371: What did open-habitat bird species carry more of? Ticks overall? Or certain life stages of ticks?

Larvae. Clarification added.

2.28. Lines 370-372: The sentence is a little confusing, but based on my interpretation of the sentence, I think the sentence should be broken up into two separate sentences. One sentence compares open-habitat bird species and forest species, and the second sentence describes ground-nesting species and species that nest in trees and shrubs.

Modification made.

2.29. Lines 376-378: “For mice, sex of the host was the only intrinsic factor to significantly affect the number of ticks infesting hosts, where males…”

Modification made.

2.30. Table 4: Are some of the columns misaligned? Things like “Intercept,” “Predicted density of questing larvae,” and “Number of engorged larvae” look like they should be aligned with the rest of the table. I would also suggest moving the Infectivity Models to a separate table. When you reference them in the paper, it can get a little confusing as to which table you are referencing. I also almost missed the “Infectivity models” header when reading the table the first time. So either make two separate tables or make the header more noticeable.

The table has been reformatted for clarity but kept in one table for conciseness. The headings identifying each model have been made more easily noticeable.

Line 405: “… but captured insufficient animals…”

Correction made.

2.31. Table 5: I think it might look a little better if you somehow moved the family names and associated data up as a subheader and then list all of the bird species under that family. Then you have another subheader with the next family and list all those individuals under that family and so on and so forth.

Modification made.

2.32. Lines 430-432: This was only briefly mentioned in the Results and B. miyamotoi results were combined for both small mammals and birds – I think finding the first report of B. miyamotoi in larvae from birds is super neat and should be emphasized in a separate sentence in the Results, if possible. (…)

Added (Page 31, Lines 400-403).

(…) That being said, to make the jump that B. miyamotoi circulates in bird populations at the study site might be a reach considering that none of the bird biopsies came up positive for the pathogen.

We have removed this part of the sentence. Please see, however, the previous response about bird biopsies (#1.3, 2.2, 2.16) and the fuller elaboration of our thinking about the pathogens detected from feeding larvae and the possible implications for their circulation in local host populations in the discussion.

2.33. Line 434: “most prevalent tick-borne pathogen, B. burgdorferi.”

Modification made.

2.34. Lines 461-465: This sentence can probably be separated into two sentences.

Modification made.

2.35. Lines 477-478: Again, can we really say this if the birds tested negative? Based on the explanation in lines 484-487, it sounds like birds can clear and infection during a blood meal, but like my previous comment mentioned, larval ticks only feed for a few days at a time. Are there references that note how quickly birds can clear infection and if this differs per species?

Please see previous answers in #1.3 and #2.2.

2.36. Lines 504-506: I actually thought B. burgdorferi seemed pretty common in your ticks from birds, with infectivity rates between 11-20%. Even if the birds were not positive themselves, the ticks coming from the birds show that the pathogen is pretty prevalent.

Modification made.

2.37. Lines 512-515: I think “and” is the wrong transition word. Maybe using “therefore” or “and thusly” might be better.

Modification made.

2.38. Lines 520-525: This entire sentence is rather wordy and gets long-winded when trying to read it – could there be a way to shorten it or to break it up into a couple of sentences?

Modification made.

2.39. Lines 534-536: Do you happen to have a reference supporting the claim about different energy balances between male and female mice and how it contributes to different immune suppression mechanisms?

Reference added.

2.40. References: Some species/group names should be properly formatted (italicized, capitalized, etc.). See references 28, 35, and 64. Those were the ones I quickly found, but another review might be a good idea.

Corrections made.

Comments by Reviewer #3:

3.1. Line 174-175 I assume engorgement was determined visually

Yes. Added clarifications.

3.2. Line 271-276 Were the point counts conducted both visually and aurally? How were the bird calls identified? Were recordings made and compared to sonograms or did someone identify the birds by ear? Were the point counts conducted at the same time of day each time or at different times?

Added clarifications.

3.3. I noticed that occasionally there would be long, cumbersome sentences where the impact of the sentence would be enhanced by breaking it up into multiple sentences. For example lines 42-45, 107-112, 460-465, 591-595.

Modifications made.

3.4. I am not sure if PLoS has an opinion on the capitalization of common names of birds since there is some debate about whether or not that is appropriate. However, please be consistent throughout the manuscript text and tables when capitalizing these names.

Common bird names were capitalised, in accordance with the guidelines of the American Ornithological Society (https://americanornithology.org/nacc/guidelines-for-english-bird-names/).

3.5. Lines 180 and 182 have gene names that should be italicized

Correction made.

3.6. For R packages, please indicate the version used if available

Added.

3.7. Line 261 "White-footed mouse" is capitalized but all other references in the text have "white" as lower case

Correction made.

3.8. In table 2, please define what "infestation intensity" is.

Definition added.

3.9. Lines 341-342 The numbers that is referred to here is in parentheses whereas the confidence intervals are in brackets

Correction made.

3.10. Line 344 2210 needs a comma: 2,210

Correction made.

3.11. Line 349 2257 and 1226 also need commas: 2,257 and 1,226

Correction made.

3.12. Line 405 capture should be captured

Correction made.

3.13. Table 5 Under the 'Infestation' heading the 'No' needs a period 'No.'

Correction made.

3.14. Lines 446-450 It is not necessary to include this unpublished information and these lines could be removed.

Removed.

3.15. Line 473 White-tailed deer may also be a reservoir for B. miyamotoi and might be worth mentioning here or considering for future studies. Han, S., Hickling, G. J., & Tsao, J. I. (2016). High prevalence of Borrelia miyamotoi among adult blacklegged ticks from white-tailed deer. Emerging infectious diseases, 22(2), 316.

Information added.

3.16. The conclusions were sound and supported by the data but I do have one question concerning a statement made in lines 552-555. The authors state that there were twice the amount of larvae carried by birds compared to white-footed mice but I can't seem to find which data support that in the results.

This was indeed a misinterpretation and the passage has been corrected.

Other editing step:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Diagnostic and conversion done, and figure updated.

Attachment

Submitted filename: Response to Reviewers.docx

Decision Letter 1

Brian Stevenson

23 Mar 2022

Transmission patterns of tick-borne pathogens among birds and rodents in a forested park in southeastern Canada

PONE-D-21-34840R1

Dear Dr. Dumas,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Brian Stevenson, Ph.D.

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Acceptance letter

Brian Stevenson

29 Mar 2022

PONE-D-21-34840R1

Transmission patterns of tick-borne pathogens among birds and rodents in a forested park in southeastern Canada

Dear Dr. Dumas:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Prof. Brian Stevenson

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 File. Original datasets used in the study.

    (XLSX)

    Attachment

    Submitted filename: Response to Reviewers.docx

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting information files.


    Articles from PLoS ONE are provided here courtesy of PLOS

    RESOURCES