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Infectious Disease Modelling logoLink to Infectious Disease Modelling
. 2022 May 4;7(2):138–160. doi: 10.1016/j.idm.2022.04.005

Dynamics of novel COVID-19 in the presence of Co-morbidity

Amit Kumar Saha 1,, Chandra Nath Podder 1, Ashrafi Meher Niger 1
PMCID: PMC9065686  PMID: 35530528

Abstract

A novel coronavirus (COVID-19) has emerged as a global serious public health issue from December 2019. People having a weak immune system are more susceptible to coronavirus infection. It is a double challenge for people of any age with certain underlying medical conditions including cardiovascular disease, diabetes, high blood pressure and cancer etc. Co-morbidity increases the probability of COVID-19 complication. In this paper a deterministic compartmental model is formulated to understand the transmission dynamics of COVID-19. Rigorous mathematical analysis of the model shows that it exhibits backward bifurcation phenomenon when the basic reproduction number is less than unity. For the case of no re-infection it is shown that having the reproduction number less than one is necessary and sufficient for the effective control of COVID-19, that is, the disease free equilibrium is globally asymptotically stable when the reproduction threshold is less than unity. Furthermore, in the absence of reinfection, a unique endemic equilibrium of the model exists which is globally asymptotically stable whenever the reproduction number is greater than unity. Numerical simulations of the model, using data relevant to COVID-19 transmission dynamics, show that the use of efficacious face masks publicly could lead to the elimination of COVID-19 up to a satisfactory level. The study also shows that in the presence of co-morbidity, the disease increases significantly.

Keywords: COVID-19, Co-morbidity, Face-mask

1. Introduction

At this moment the world is confronting an issue that is neither created by any political instability nor created by any superbug that was considered a major public health threat worldwide. Rather the problem is created by an outbreak of a novel coronavirus (COVID-19) which has become a global pandemic Iboi et al. (2020). COVID-19, caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), started its outbreak in Wuhan, the capital of Hubei Province in the People's Republic of China, in December 2019 Ngonghala et al. (2020); WHO; Li et al. (2020). It has developed into a global health issue since its manifestation Omame et al. (2020). As of November 15, 2021, it has affected 243 countries and territories, causing about 194,337,614 infections and 4,162,590 deaths around the world.

COVID-19 is the third human coronavirus to appear in the twenty-first century, following the transmission of SARS-COV in 2002 and MERS-COV in 2012 Yang and Wang (2020). These two diseases are thought to be the predecessors of COVID-19 Shi et al. (2020). According to a recent study, coronavirus can survive on inert surfaces like metal, glass, or plastic for up to 9 days and this study provides strong evidence about the survival of the virus in the environment for several days Kampf et al. (2020). COVID-19, like SARS-COV and MERS-COV, can be transmitted from person-to-person through direct contact with contaminated surfaces or objects and through the inhalation of respiratory droplets from infected individuals Bai et al. (2020). The symptoms of COVID-19 ranges from a simple flu-like illness, with other symptoms including fever, fatigue, coughing, muscle pains, shortness of breath, loss or change of taste or smell, and sore throat to more severe diseases such as pneumonia, bronchitis, severe acute respiratory distress syndrome (ARDS) and even death Shi et al. (2020).

COVID-19 is equally transmissible in all age groups however disease-related complexity increases in elderly people and individuals with certain medical problems (having at least one morbidity) Khan et al. (2020). According to CDC, more than 80% of COVID-19 related fatalities occur in the age group 65 or over, and more than 95% of COVID-19 related fatalities occur in individuals older than 45 (CDC (a)). A recent study consisting of 27,670 samples states that almost 42.5% of the samples already had any pre-existing co-morbidities. Among these samples, hypertension (39.5%), diabetes (25.2%), and cardiovascular disease (12.4%) were the most commonly highlighted co-morbidities Khan et al. (2020). Cardiovascular diseases, cerebrovascular disease, respiratory disease, renal diseases, immune and metabolic disorders, hepatic diseases, obesity, diabetes, hypertension and cancer are the most often reported co-morbidities among COVID-19 Khan et al. (2020); Jain and Yuan (2020). These co-morbidities accelerate the severity of COVID-19 infection, ICU admission, and increase the risk of COVID-19-related mortality among people of all ages Yang et al. (2020). A greater neutrophil-lymphocyte ratio, greater C-reactive protein, and greater D-dimer level are more common in people with these diseases Khan et al. (2020). These result in multiple organ failure, hypoxia, myocardial damage and severe pneumonia and things get further worse if the individual is infected with COVID-19 as excessive impairment of myocardial cells occur Khan et al. (2020); Guo et al. (2020). It was reported that the risk of mortality, among the cardiovascular disease-related patients infected with the SARS-CoV and MERS-CoV, was similar to that of the cardiovascular disease-related patients infected with COVID-19 Khan et al. (2020).

Under these circumstances, mass vaccination is a vital tool for fighting against the pandemic and reducing the spread of COVID-19 (CDC (b)). Six vaccines (Pfizer BioNTech, Moderna, Oxford/AstraZeneca, Janssen, Sinopharm, and Sinovac) have been authorized by WHO as of July 2021. Although these vaccines provide a way out of the pandemic, success largely depends on the unique characteristics of the vaccine and community acceptance Moore et al. (2021). Given the recent appearance of novel SARS-CoV-2 mutants that have been proven to be more transmissible, and may increase the disease severity as compared to the original strain, early data proposes that vaccines may be efficacious against certain variants however may be less viable against others (CDC (b)). Thus, it is obvious that vaccination alone will not be sufficient to stop the disease spread and it is still unclear how long vaccines can keep people safe Giordano et al. (2021). So a well-planned vaccination program should be integrated with the continuous use of Non-Pharmaceutical Interventions (NPIs) until the mortality rate resembles seasonal influenza Giordano et al. (2021); Grundel et al. (2021). So in the absence of a safe and effective vaccine, and even if someone is fully vaccinated but takes drugs that weaken the immune system, prevention measures (such as maintaining social distance, wearing masks and avoiding crowds) are recommended (CDC (b)).

In this scenario, where there are a lot of uncertainties about vaccine availability, vaccine effectiveness and vaccine expiration period, mathematical models, generally systems of nonlinear differential equations (deterministic or stochastic), have been a powerful means in understanding and predicting transmission dynamics of infectious diseases, such as HIV, influenza. Moreover, it helps implement suitable measures and effective methods for controlling the pandemic's spread and mitigating its effects. Thus, mathematical approaches are useful in studying the behavior of COVID-19 (that is, in estimating its potential burden). A significant number of modelling studies have already been developed on the transmission dynamics of COVID-19 (some of them are given here Ngonghala et al. (2020); Ivorra et al. (2020); Khan and Atangana (2020); Kucharski et al. (2020); Mizumoto and Chowell (2020); Ferguson et al. (2020, p. 20); Atangana (2020); Okuonghae and Omame (2020); Mancuso et al. (2021); Gumel et al. (2021). However, the impact of co-morbidities on the transmission dynamics of COVID-19 was not considered in all of those studies except Omame et al. (2020). Our study is based on the development of a new mathematical model to study the impact of co-morbidities and re-infection on the dynamics of COVID-19. In addition, two extra classes, exposed class and hospitalized class, have been considered in this model. These two classes play important role on the transmission dynamics of COVID-19. If the exposed individuals can be identified, via contract tracing that will help break the chain of transmission and prevent the onward spread to more people, we will be able to reduce the number of people who are circulating it and control the spread of COVID-19. Again as the hospitalized individuals are in direct contact with health care providers (doctors and nurses), they should be monitored carefully to control the disease spread and health care providers should take precautionary measurements (using personal protective equipment, wearing gloves and face mask) so that they can avoid infection and can not be the carrier of the virus.

The paper is organized as follows. In section 2, the COVID-19 model is formulated and the basic properties of the model are described. The model is qualitatively analyzed in section 3. In section 4, numerical simulations and corresponding discussions are presented and global uncertainty & sensitivity analysis are carried out in section 5. Section 6 deals with the conclusions.

2. Model formulation

The total human population at time t, denoted by N(t), has been divided into ten mutually exclusive compartments: Susceptible individuals (S(t)), co-morbid susceptible individuals (Sc(t)), exposed individuals (E(t)), asymptomatic COVID-19 infected individuals Ia(t), symptomatic COVID-19 infected individuals Is(t), asymptomatic COVID-19 infected individuals having co-morbidity Iac(t), symptomatic COVID-19 infected individuals having co-morbidity Isc(t), quarantined individuals Q(t), Hospitalized individuals H(t) and recovered individuals R(t), so that

N(t) = S(t) + Sc(t) + E(t) + Ia(t) + Is(t) + Iac(t) + Isc(t) + Q(t) + H(t) + R(t).

The following assumptions are considered during the formulation of the model:

  • Births rate has not been taken into account.

  • Exposed individuals are asymptomatically infected but can not transmit infection.

  • Quarantined individuals can not infect others as they are in isolation.

  • Recovered individuals may return to exposed class but at a lower rate as they develop some sort of immunity against COVID-19.

Susceptible individuals get infected with COVID-19 when they contact with infected individuals (i.e., those in the Ia, Is, Iac, Isc, and H classes), at a rate λ, given by

λ=(1em){β(ηaIa+Is+T1Iac+T2Isc+ηhH)}N, (1)

where, β is the effective contact rate. 0 < m ≤ 1 is the proportion of individuals who wear face masks properly and consistently and 0 < e ≤ 1 is the effectiveness of the face masks. T1,T2>1 are modification parameters that indicates the high infectiousness of COVID-19 infected individuals due to the presence of co-morbidity (in the Iac and Isc classes). 0 < ηa < 1 is a modification parameter that indicates the low infectiousness of asymptomatic infected individuals (in the Ia class) in relation to the symptomatic infected individuals (in the Is class). 0 < ηh < 1 is a modification parameter that indicates the low infectiousness of hospitalized individuals (in the H class) due to isolation. Variables and parameters used in this model have been described in Table 1, Table 2.

Table 1.

Description of variables for the COVID-19 model (2).

Variable Description
S Population of susceptible individuals
Sc Population of co-morbid susceptible individuals
E Population of exposed individuals (infected but not showing symptoms and can not transmit infection)
Ia Population of asymptomatically-infectious individuals without co-morbidity
Is Population of symptomatically-infectious individuals without co-morbidity
Iac Population of asymptomatically-infectious individuals having co-morbidity
Isc Population of symptomatically-infectious individuals having co-morbidity
Q Population of quarantined individuals
H Population of individuals who are hospitalized
R Population of individuals who have recovered from COVID-19

Table 2.

Description of parameters for the COVID-19 model (2).

Parameter Description
Λ Recruitment rate of humans
β Effective contact rate for COVID-19 transmission
m Proportion of individuals who wear face masks publicly
e Efficacy of face masks to prevent acquisition of infection by susceptible individuals as well as to reduce the transmission of COVID-19 by infected individuals
T1,T2 Modification parameter for increased infectiousness of COVID-19 infected individuals due to the presence of co-morbidity
T3 Modification parameter accounting for increased susceptibility to COVID-19 infection by co-morbid susceptibles
ηa, ηh Modification parameter for the assumed reduced infectiousness of asymptomatic infected individuals and hospitalized individuals
ξ Proportion of susceptible individuals who developed co-morbidity
α Rate at which recovered individuals become susceptible
μ Natural death rate
σi Transition from exposed (E) class to infectious classes (Ia, Is, Iac, and Isc)
d1, d2, and d3 Proportion of exposed individuals who progress to the Ia, Is, and Iac classes respectively (d1 + d2 + d3 ≤ 1)
1 − (d1 + d2 + d3) Proportion of exposed individuals who progress to the Isc class
σq Transition from exposed (E) class to quarantined (Q) class
Ω Transition from quarantined (Q) class to infectious classes (Ia, Is, Iac, and Isc)
l1, l2, and l3 Proportion of quarantined individuals who progress to the Ia, Is, and Iac classes respectively (l1 + l2 + l3 ≤ 1)
1 − (l1 + l2 + l3) Proportion of quarantined individuals who progress to the Isc class
φa, φs, φac, and φsc Transition from Ia, Is, Iac, and Isc classes to H class
ψa, ψs, ψac, ψsc, ψq, and ψh Recovery rate for individuals from Ia, Is, Iac, Isc, Q, and H classes
δa, δs, δac, δsc, δq, and δh COVID-19 induced death rate for individuals in the Ia, Is, Iac, Isc, Q, and H classes

Based on the above assumptions and the diagram (Fig. 1), we have the following system of non-linear differential equations (where a dot denotes differentiation with respect to time) to model the transmission dynamics of COVID-19.

S˙=ΛλS(ξ+μ)S,S˙c=ξST3λScμSc,E˙=λS+T3λSc+αλR(σi+σq+μ)E,Ia˙=d1σiE+l1ΩQ(ψa+φa+δa+μ)Ia,Is˙=d2σiE+l2ΩQ(ψs+φs+δs+μ)Is,I˙ac=d3σiE+l3ΩQ(ψac+φac+δac+μ)Iac,I˙sc=(1d)σiE+(1l)ΩQ(ψsc+φsc+δsc+μ)Isc,Q˙=σqE(ψq+Ω+δq+μ)Q,H˙=φaIa+φsIs+φacIac+φscIsc(ψh+δh+μ)H,R˙=ψaIa+ψsIs+ψacIac+ψscIsc+ψqQ+ψhHαλRμR, (2)

where, d = d1 + d2 + d3, and l = l1 + l2 + l3.

Fig. 1.

Fig. 1

Flowchart of the COVID-19 model (2).

In the model (2), It is assumed that susceptible humans are recruited into the population at a constant rate Λ. Among the susceptible individuals who have co-morbidity move to Sc class at a rate ξ. The parameter T3>1 indicates the increased susceptibility to COVID-19 infection by co-morbid susceptible individual than susceptible individuals without co-morbidity. Exposed individuals progress to Ia, Is, Iac, and Isc classes at a rate d1 σi, d2 σi, d3 σi, and (1 − d1 − d2 − d3) σi, respectively (1σi is the incubation period of exposed individuals for COVID-19). Exposed individuals move to Q class at a rate σq. Quarantined individuals progress to Ia, Is, Iac, and Isc classes at a rate l1 Ω, l2 Ω, l3 Ω, and (1 − l1 − l2 − l3) Ω, respectively. Individuals in the classes Ia, Is, Iac, and Isc are hospitalized at a rate φa, φs, φsc, and φac, respectively. The recovery rate for Ia, Is, Iac, Isc, Q, and H classes are ψa, ψs, ψac, ψsc, ψq, and ψh, respectively. Recovered individuals become exposed at a rate α. The parameter δa, δs, δac, δsc, δq, and δh represents COVID-19 induced death rate for Ia, Is, Iac, Isc, Q, and H classes, respectively. There is a natural death for all classes at a rate μ.

3. Analysis of the model

3.1. Basic properties

Property-1: Positivity and boundedness of solutions.

It is important to show that all the state variables of the model (2) are non-negative for all time t. The following result can be obtained.

Theorem 1

Solutions of the COVID-19 model (2), with positive initial conditions are positive for all time t > 0.

Proof.Let (S, Sc, E, Ia, Is, Iac, Isc, Q, H, and R) be the solutions of the model (2). Now from the first equation of the system (2) it can be written as

ddtS(t)exp0tλ(u)du+(μ+ξ)t=Λexp0tλ(u)du+(μ+ξ)t.

Hence,

S(t)exp0tλ(u)du+(μ+ξ)tS(0)=0tΛexp0xλ(u)du+(μ+ξ)tdx.

From here we can write

S(t)=S(0)exp0tλ(u)du+(μ+ξ)t+exp0tλ(u)du+(μ+ξ)t0tΛexp0xλ(u)du+(μ+ξ)tdx>0.

Similarly, it can be shown that

Sc ≥ 0, E ≥ 0, Ia ≥ 0, Is ≥ 0, Iac ≥ 0, Isc ≥ 0, Q ≥ 0, H ≥ 0, and R ≥ 0 for all t ≥ 0.

To show the boundedness of the solutions we add all the equations of the system (2) and we get

dNdt=ΛμNδaIaδsIsδacIacδscIscδqQδhH. (3)

It is obvious that 0 < Ia ≤ N, 0 < Is ≤ N, 0 < Iac ≤ N, 0 < Isc ≤ N, 0 < Q ≤ N, 0 < H ≤ N.

It follows that

Λ(μ+δa+δs+δac+δsc+δq+δh)NdNdt<ΛμN. (4)

Thus, Λμ+δa+δs+δac+δsc+δq+δhlim inftNlim suptNΛμ.

This implies lim suptNΛμ. □

Property-2: Invariant Regions.

Consider the region D=(S,Sc,E,Ia,Is,Iac,Isc,Q,H,R)R+10:NΛμ.

It follows from (3), (4) that

dNdtΛμN. (5)

Since dNdt is bounded by Λ − μ N, using a standard comparison theorem in Lakshmikantham et al. (1989) it can be shown that N(t)N(0)eμt+Λμ1eμt. In particular, N(t)ΛμifN(0)Λμ. Thus, every solution of the model (2) with initial conditions in D remains in D for t > 0. Hence, D is positive invariant and attracting Hethcote (2000); Sharomi et al. (2008).

3.2. Local stability of disease-free equilibrium (DFE)

The disease-free equilibrium, E0, of the COVID-19 model (2), is given by

E0=S,Sc,E,Ia,Is,Iac,Isc,Q,H,R=Λξ+μ,ξΛμ(ξ+μ),0,0,0,0,0,0,0,0. (6)

We investigate the linear stability of this equilibrium using the next generation operator method Diekmann et al. (1990); Van den Driessche and Watmough (2002) on the system (2). For the system (2), the matrices F and V, for the new infection terms and the remaining transfer terms Van den Driessche and Watmough (2002) are, respectively, given by

F=0(1em)Fβηa(1em)Fβ(1em)FβaT1(1em)FβaT20(1em)Fβaηh000000000000000000000000000000000000000000,
V=k1000000d1σik2000l1Ω0d2σi0k300l2Ω0d3σi00k40l3Ω0(1d)σi000k5(1l)Ω0σq0000k600φaφsφacφsc0k7,

where, k1=σi+σq+μ,k2=ψa+φa+δa+μ,k3=ψs+φs+δs+μ,k4=ψac+φac+δac+μ,k5=ψsc+φsc+δsc+μ,k6=ψq+Ω+δq+μ,k7=ψh+δh+μ,d=d1+d2+d3,l=l1+l2+l3,andF=S+τ3Sc+αRN.

The basic reproduction number Chavez et al. (2002); Hethcote (2000) denoted by Rc, is given by

Rc=ρ(FV1)=Ra+Rs+Rac+Rsc+Rh, (7)

where, ρ represents the spectral radius of the next generation matrix F V−1 and

Ra=β(1em)FηaBa,Rs=β(1em)FBs,Rac=β(1em)FT1Bac,Rsc=β(1em)FT2Bsc,Rh=β(1em)FηhBh,

with,

Ba=(Ωσql1+k6σid1)k1k2k6,Bs=(Ωσql2+k6σid2)k1k3k6,Bac=(Ωσql3+k6σid3)k1k4k6,Bsc=Ωσq(1l)+k6σi(1d)k1k5k6,Bh=φa(Ωσql1+k6σid1)k1k2k6k7+φs(Ωσql2+k6σid2)k1k3k6k7+φac(Ωσql3+k6σid3)k1k4k6k7+φscΩσq(1l)+k6σi(1d)k1k5k6k7.

The following result is established using Theorem 2 of Van den Driessche and Watmough (2002).

Lemma 1

The DFE of the COVID-19 model, given by (2), is locally-asymptotically stable (LAS) if Rc<1, and unstable if Rc>1.

3.3. Existence of endemic equilibrium point (EEP)

Let E1=(S,Sc,E,Ia,Is,Iac,Isc,Q,H,R) be any arbitrary equilibrium of the model (2) and let

λ=β(1em)(ηaIa+Is+T1Iac+T2Isc+ηhH)N (8)

be the force of infection at steady-state. Therefore, from the model (2) we have,

Sc=ξST3λ+μ,E=Beμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS,Ia=Baμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS,Is=Bsμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS,Iac=Bacμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS,Isc=Bscμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS,Q=Bqμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS,H=Bhμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS,R=Brμ+αλμ+αλμ+αλ(1Br)1+T3ξT3λ+μλS, (9)

where,

Be=1k1,Bq=σqk6k1,andBr=ψaBa+ψsBs+ψacBac+ψscBsc+ψqBq+ψhBh.

Substituting (9) into (8) gives

λ=(1em){β(ηaBa+Bs+T1Bac+T2Bsc+ηhBh)}μ+αλμ+αλ(1Br)1+T3ξT3λ+μλS1+ξT3λ+μ+Bcμ+αλμ+αλ(1Br)+Br1μ+αλ(1Br)1+T3ξT3λ+μλS, (10)

where, Bc = Be + Ba + Bs + Bac + Bsc + Bq + Bh.

After a tedious calculation we get the following polynomial equation in terms of λ

λA1(λ)3+A2(λ)2+A3λ+A4=0, (11)

where,

A1=αT3Bc,A2=ατ3(1Br)+(μBc+Br)T3+αBc(μ+T3ξ)αT3β(1em)(ηaBa+Bs+T1Bac+T2Bsc+ηhBh),A3=τ3μ+α(μ+ξ)(1Br)+(Bcμ+Br)(μ+T3ξ)β(1em)(ηaBa+Bs+T1Bac+T2Bsc+ηhBh)α(μ+T3ξ)+τ3μ,A4=μ(μ+ξ)(1Rc).

From (11), λ∗ = 0 corresponds to the DFE E0 and the non-zero equilibria satisfy

f(λ)=A1(λ)3+A2(λ)2+A3λ+A4=0. (12)

Now, we determine the number of endemic equilibria of the system. In (12), A1 is always positive and A4 is positive (negative) if Rc<1(Rc>1). So we have the following two cases Buonomo and Lacitignola (2010):

  • Case-1:Rc>1

A1 is always positive and A4 < 0 in this case. According to the Descarte's rule of sign, depending on the sign of A2 and A3, we have either three positive roots or one positive root. To determine the exact number of roots we look at the derivative f/λ=3A1(λ)2+2A2λ+A3 and its discriminant Δ=4(A223A1A3). When Δ > 0, the two real roots λ+ and λ of ∂f/∂λ will determine whether there are three real positive roots or one real positive root of f(λ∗). In the cases λ < 0 < λ+ and λ < λ+ < 0, there is one positive real root and when 0 < λ < λ+, there are three positive real roots if f(λ) > 0 or one positive real root if f(λ) < 0. Thus we have the following table.

  • Case-2:Rc<1

A1 is always positive and A4 > 0 in this case. According to the Descarte's rule of sign, depending on the sign of A2 and A3, we have either two positive roots or zero positive root. As in the previous case, to determine the exact number of roots we look at the derivative ∂f/∂λ and its discriminant Δ. When Δ > 0, the two real roots λ+ and λ of ∂f/∂λ will determine whether there are two real positive roots or zero real positive root of f(λ∗). In both the cases λ < 0 < λ+ and 0 < λ < λ+, there are two positive real roots of f(λ∗) if f(λ+) < 0 or zero positive real root of f(λ∗) if f(λ+) > 0 and when λ < λ+ < 0, there is no positive real root of f(λ∗). Thus we have the following table.

3.4. Backward bifurcation analysis of the model

From Table 3, Table 4, there is a possibility of having two endemic equilibrium whenever Rc<1. Now in this case with the parameter values from Table 5, we have A2 < 0 and A3 < 0. This indicates the possibility of having backward bifurcation phenomena. Using the center manifold theory Carr (2012); Van den Driessche and Watmough (2002) we will explore the phenomena. Consider S = x1, Sc = x2, E = x3, Ia = x4, Is = x5, Iac = x6, Isc = x7, Q = x8, H = x9, and R = x10, so that in vector form the model (2) can be written as dXdt=(f1,f2,f3,f4,f5,f6,f7,f8,f9,f10)T, where X=(x1,x2,x3,x4,x5,x6,x7,x8,x9,x10)T and then we have

dx1dt=f1=Λλx1k10x1,dx2dt=f2=ξx1T3λx2μx2,dx3dt=f3=λx1+T3λx2+αλx10k1x3,dx4dt=f4=d1σix3+l1Ωx8k2x4,dx5dt=f5=d2σix3+l2Ωx8k3x5,dx6dt=f6=d3σix3+l3Ωx8k4x6,dx7dt=f7=(1d)σix3+(1l)Ωx8k5x7,dx8dt=f8=σqx3k6x8,dx9dt=f9=φax4+φsx5+φacx6+φscx7k7x9,dx10dt=f10=ψax4+ψsx5+ψacx6+ψscx7+ψqx8+ψhx9αλx10k8x10, (13)

where,

Table 3.

Number of real positive roots for the case Rc>1 depending on the sign of Δ, A2 and A3.

Δ A2 A3 Number of real positive roots of f(λ∗)
>0 >0 <0 1
>0 >0 >0 1
>0 <0 <0 1
>0 <0 >0 1 if f(λ)<0
3 if f(λ)>0

Table 4.

Number of real positive roots for the case Rc<1 depending on the sign of Δ, A2 and A3.

Δ A2 A3 Number of real positive roots of f(λ∗)
>0 >0 >0 0
>0 <0 >0 0
>0 <0 <0 2
>0 <0 >0 0 if f(λ+)>0
2 if f(λ+)<0

Table 5.

Estimated and fitted parameters for the model (2) using daily COVID-19 cases for U.S.A.

Parameter Baseline Values References
Λ 5000 Estimated from Omame et al. (2020)
β 0.395 Assumed
m 0.1 Ngonghala et al. (2020)
e 0.5 Ngonghala et al. (2020)
T1,T2 1.15, 1.25 Estimated from Omame et al. (2020)
T3 1.5 Estimated from Omame et al. (2020)
ηa, ηh 0.6, 0.65 Assumed
ξ 0.0001 Estimated from Omame et al. (2020)
α 0.0001 Estimated from Omame et al. (2020)
μ 0.00004 Estimated from Omame et al. (2020)
σi 0.2 Ngonghala et al. (2020)
d1, d2, and d3 0.25, 0.525, 0.075 Assumed
1 − (d1 + d2 + d3) 0.15 Shi et al. (2020)
σq 0.116 Ngonghala et al. (2020)
Ω 0.2 Ngonghala et al. (2020)
l1, l2, and l3 0.25, 0.525, 0.075 Assumed
1 − (l1 + l2 + l3) 0.15 Assumed
φa, φs, φac, and φsc 0.1, 0.15, 0.2, 0.25 Ngonghala et al. (2020)
ψa, ψs, ψac, ψsc, ψq, and ψh 0.14, 0.12, 0.13, 0.11, 0.2, 0.09 Ngonghala et al. (2020)
δa, δs, δac, δsc, δq, and δh 0.0095, 0.02, 0.025, 0.03, 0.0095, 0.015 Ngonghala et al. (2020)

k1 = σi + σq + μ, k2 = ψa + φa + δa + μ, k3 = ψs + φs + δs + μ, k4 = ψac + φac + δac + μ,

k5 = ψsc + φsc + δsc + μ, k6 = ψq + Ω + δq + μ, k7 = ψh + δh + μ, k8 = μ, k10 = μ + ξ,

and, λ=(1em){β(ηax4+x5+T1x6+T2x7+ηhx9)}N.

Now consider Rc=1 and β = β∗ is a bifurcation parameter. Thus we get

β=β=N(1em)(S+τ3Sc+αR)(ηaBa+Bs+T1Bac+T2Bsc+ηhBh).

The linearization matrix of the system around the DFE with β∗ evaluated at the DFE is given by calculating the Jacobian of the system (13):

J(E0)=k1000ηaJ1J1T1J1T2J10ηhJ10ξμ0ηaJ2J2T1J2T2J20ηhJ2000k1ηaJ3J3T1J3T2J30ηhJ3000d1σik2000l1Ω0000d2σi0k300l2Ω0000d3σi00k40l3Ω0000(1d)σi000k5(1l)Ω0000σq0000k600000φaφsφacφsc0k70000ψaψsψacψscψqψhk8,

where, J1=(1em)βμξ+μ,J2=(1em)βT3ξξ+μ,andJ3=(1em)β(μ+T3ξ)ξ+μ. The Jacobian J(E0) of (13) with β = β∗, denoted by Jβ, has a simple zero eigenvalue (with all other eigenvalues having negative real part). Hence, the center manifold theory Carr (2012); Castillo-Chavez and Song (2004), can be used to analyze the dynamics of the model (2).

Eigenvectors of Jβ=J(E0)|β=β:

When Rc=1, the jacobian (Jβ) of (13) has a right eigenvector corresponding to the zero eigen value which is given by w=[w1,w2,w3,w4,w5,w6,w7,w8,w9,w10]T, where,

w1=(ηaw4+w5+T1w6+T2w7+ηhw9)J1αw10k10,w2=(ηaw4+w5+T1w6+T2w7+ηhw9)J2ξw1μ,w3=w3,w4=d1σiw3+l1Ωw8k2,w5=d2σiw3+l2Ωw8k3,w6=d3σiw3+l3Ωw8k4,w7=(1d)σiw3+(1l)Ωw8k5,w8=σqw3k6,w9=φaw4+φsw5+φacw6+φscw7k8,w10=ψaw4+ψsw5+ψacw6+ψscw7+ψqw8+ψhw9k8.

Further, Jβ has a left eigenvector v = [v1, v2, v3, v4, v5, v6, v7, v8, v9, v10] associated with the zero eigenvalue, where,

v1=0,v2=0,v3=v3,v4=ηaJ3v3+φav9k2,v5=J3v3+φsv9k3,v6=T1J3v3+φacv9k4,v7=T2J3v3+φscv9k5,v8=l1Ωv4+l2Ωv5+l3Ωv6+(1l)Ωv7k6,v9=ηhJ3v3k7,v10=0.

Computations of a and b:

The expression for a and b from Carr (2012); Castillo-Chavez and Song (2004) can be written as:

a=k,i,j=1nvkwiwj2fkxixj(0,β),

and b=k,i=1nvkwi2fkxiβ(0,β).

After some tedious manipulations it can be shown that

a=2(1em)βμv3(ηaw4+w5+T1w6+T2w7+ηhw9)Λ(μ+ξ)αw10(μ+ξ)(T31)(ξw1μw2)(w3+w4+w5+w6+w7+w8+w9+w10)(ξT3+μ),andb=(1em)v3(ξT3+μ)(ηaw4+w5+T1w6+T2w7+ηhw9)μ+ξ>0.

Thus, it follows from Theorem 4.1 of Castillo-Chavez and Song (2004) that the COVID-19 model (2) undergoes backward bifurcation at Rc=1 whenever a > 0 (Fig. 4).

Fig. 4.

Fig. 4

Backward Bifurcation Diagram of Model (2) with α = 50 and all other parameters as given in Table 5. In this case a = 0.000253 > 0, b = 1.5267 > 0 and Rc=0.858.

3.5. Effect of no Re-infection

Setting α = 0 in (10) and performing some calculations we get the following polynomial in terms of λ

λB1(λ)2+B2λ+B3=0, (14)

where,

B1=(μBc+Br)T3,B2=τ3μ+(Bcμ+Br)(μ+T3ξ)β(1em)(ηaBa+Bs+T1Bac+T2Bsc+ηhBh)τ3μ,B3=μ(μ+ξ)(1Rc).

From (14), λ∗ = 0 corresponds to the DFE E0 and the non-zero equilibria satisfy

f(λ)=B1(λ)2+B2λ+B3=0. (15)

If multiple non-negative equilibria exists then there is a possibility of having backward bifurcation. From (15), B1 is always positive and B3 is positive if Rc is less than one and B3 is negative if Rc is greater than one. Hence, we have the following result.

Theorem 2

The COVID-19 model (2) with α = 0 has

  • (i)

    exactly one unique endemic equilibrium ifB3 < 0 (i.e., Rc>1),

  • (ii)

    exactly one unique endemic equilibrium ifB2 < 0, and B3 = 0 or B224B1B3=0,

  • (iii)

    no endemic equilibrium ifRc<1because thenB2 > 0, B3 > 0 and B1 is always positive.

This theorem confirms that the model does not have any endemic equilibrium when Rc<1. Thus the model does not show backward bifurcation when there is no re-infection.

3.5.1. Global asymptotic stability of DFE in the absence of Re-infection

Theorem 3

The DFE of the COVID-19 model (2), given by E0, is globally asymptotically stable (GAS) whenever Rc<1.

Proof.We consider the following Lypunov function:

L=f1E+f2Ia+f3Is+f4Iac+f5Isc+f6Q+f7H,

where,

f1=1ηhk1k2k3k4k5k6ηak3k4k5k7(Ωσql1+k6σid1)+k2k4k5k7(Ωσql2+k6σid2)+T1k2k3k5k7(Ωσql3+k6σid3)+T2k2k3k4k7Ωσq(1l)+k6σi(1d)+ηhk3k4k5φa(Ωσql1+k6σid1)+ηhk2k4k5φs(Ωσql2+k6σid2)+ηhk2k3k5φac(Ωσql3+k6σid3)+ηhk2k3k4φscΩσq(1l)+k6σi(1d),
f2=(ηhφa+ηak7)k2ηh,f3=(ηhφs+k7)k3ηh,f4=(ηhφac+k7T1)k4ηh,f5=(ηhφsc+k7T2)k5ηh,
f6=ΩηHk2k3k4k5k6ηhk2k3k4φsc(1l)+k2k3k4k7T2(1l)+ηhk3k4k5φal1+ηhk2k4k5φsl2+ηhk2k3k5φacl3+ηak3k4k5k7l1+k2k3k5k7l3T1+k2k4k5k7l2,f7=1.

with Lyapunov derivative

L˙=f1E˙+f2I˙a+f3I˙s+f4I˙ac+f5I˙sc+f6Q˙+f7H˙=f1(λS+T3λSck1E)+f2(d1σiE+l1ΩQk2Ia)+f3(d2σiE+l2ΩQk3Is)+f4(d3σiE+l3ΩQk4Iac)+f5(1d)σiE+(1l)ΩQk5Isc+f6(σqEk6Q)+f7(φaIa+φsIs+φacIac+φscIsck7H)
f1k1+f2d1σi+f3d2σi+f4d3σi+f5(1d)σi+f6σqE+f1β(1em)ηak9f2k2+f7φaIa+f1β(1em)k9f3k3+f7φsIsf1β(1em)T1k9f4k4+f7φacIac+f1β(1em)T2k9f5k5+f7φscIscf2l1Ω+f3l2Ω+f4l3Ω+f5(1l)Ωf6k6Q+f1β(1em)ηhk9f7k7H

After some rigorous calculation it can be shown that

L˙ηak7ηhRc1Ia+k7ηhRc1Is+T1k7ηhRc1Iac+T2k7ηhRc1Isc+ηhk7ηhRc1H.

Thus

L˙=k7ηh(Rc1)(ηaIa+Is+T1Iac+T2Isc+ηhH)=Nλk7ηhβ(1em)(Rc1).

Hence, L˙0forRc1, and L˙=0 if and only if E = Ia = Is = Iac = Isc = Q = H = 0. Therefore, L is a Lyapunov function on D.Hence, by the LaSalle's invariance principle LaSalle (1976), every solution to the equations of the model (2), with initial conditions in D, approaches E0 as t, whenever Rc<1. □

3.5.2. Local asymptotic stability of endemic equilibrium in the absence of Re-infection

Following the same procedure as in subsection 3.4, the expression for a and b can be written as

a=2(1em)βμv3(ηaw4+w5+T1w6+T2w7+ηhw9)Λ(μ+ξ)(T31)(ξw1μw2)(w3+w4+w5+w6+w7+w8+w9+w10)(ξT3+μ),
andb=(1em)v3(ξT3+μ)(ηaw4+w5+T1w6+T2w7+ηhw9)μ+ξ>0.

Now using the parameter value given in Table 5 we get a = −0.00002931723 < 0 and b = 0.9105000590 > 0.

Using the Center Manifold Theorem Castillo-Chavez and Song (2004) we can say that the unique endemic equilibrium is locally asymptotically stable when Rc>1. To ensure that elimination of the virus is independent of the initial sizes of the sub-populations, the globally-asymptotically stability of the DFE is established below using the techniques in Sharomi et al. (2008).

3.5.3. Global asymptotic stability of EEP in the absence of Re-infection

Theorem 4

The EEP of the COVID-19 model (2) in the absence of re-infection (α = 0), given by E1, is globally asymptotically stable (GAS) whenever Rc>1.

To prove this theorem, we will explore a graph-theoretic approach as described in Shuai and Driessche (2013). Before that we will briefly discuss some theorems and propositions.

Graph Theoretic Method:

A directed graph, briefly digraph, G consists of a set of vertices connected by directed edges (set of ordered pairs (i, j) of (not necessarily distinct) vertices); each such pair (i, j) is called an arc from its initial vertex i to its terminal vertex j. For a vertex i, the number of arcs in G whose terminal vertex is i is called the in-degree of i and the in-degree is denoted as d(i), and the out-degree, denoted as d+(i), is the number of arcs whose initial vertex is i. A digraph G is weighted if each arc is assigned a positive weight and is denoted by G(A). Given a weighted digraph G(A) with n vertices, the n × n weight matrix A is defined with aij(aij > 0), equal to the weight of arc (j, i) if it exists, and aij = 0 otherwise. A weighted digraph G(A) is strongly connected if and only if the weight matrix A is irreducible Shuai and Driessche (2013). The Laplacian matrix L = [lij] of G(A) is defined as

lij=aijifijkiaikifi=j

Let ci be the co-factor of lii in L. If G(A) is strongly connected, then ci > 0, for 1 ≤ i ≤ n. When the weighted digraph (G,A) has a certain structure, we have the following two theorems (Theorem 5 and Theorem 6 Shuai and Driessche (2013)).

Theorem 5

Letcibe given as described above. Ifaij > 0 and d(j) = 1 for some i, j, then

ciaij=k=incjajk. (16)
Theorem 6

Letcibe given as described above. Ifaij > 0 and d+(j) = 1 for some i, j, then

ciaij=k=inckaki. (17)

The following theorem (Theorem 3.5 in Shuai and Driessche (2013)) provides a graph-theoretic technique to construct a Lyapunov function L.

Theorem 7

LetObe an open set inRmand letfbe a function fromOtoRm. Consider a system of differential equation

dk=fk(d1,d2,,dm),k=1,2,.,m, (18)

withd=(d1,d2,,dm)Oand assume that

  • (i)

    There exist functionsLi:OR,Gij:ORand constantsaij0 such that for every 1 ≤ i ≤ n, Li=Li|(18)j=inaijGij(d) for zO,

  • (ii)

    ForA = [aij], each directed cycle C of G(A) has (s,r)E(C)Grs(d)0 for dO, where E(C) denotes the arc set of the directed cycle C.

Then, the functionL(d)=i=1nciLi(d)with constantsci ≥ 0 as described above, satisfies L=L|(18)0; that is, L is a Lyapunov function for equation (18).

Proof. Consider the following functions:

L1=SSSlnSS+ScScSclnScSc+EEElnEE,L2=IaIaIalnIaIa,L3=IsIsIslnIsIs,L4=IacIacIaclnIacIac,L5=IscIscIsclnIscIsc,L6=QQQlnQQ,L7=HHHlnHH.

Differentiating with respect to t we get

L1βηa(1em)Ia(S+T3Sc)NIaIalnIaIaEE+lnEE=:a12G12+β(1em)Is(S+T3Sc)NIsIslnIsIsEE+lnEE=:a13G13+βT1(1em)Iac(S+T3Sc)NIacIaclnIacIacEE+lnEE=:a14G14+βT2(1em)Isc(S+T3Sc)NIscIsclnIscIscEE+lnEE=:a15G15+βηh(1em)H(S+T3Sc)NHHlnHHEE+lnEE=:a17G17
L2d1σiEEElnEEIaIa+lnIaIa=:a21G21+l1ωQQQlnQQIaIa+lnIaIa=:a26G26
L3d2σiEEElnEEIsIs+lnIsIs=:a31G31+l2ωQQQlnQQIsIs+lnIsIs=:a36G36
L4d3σiEEElnEEIacIac+lnIacIac=:a41G41+l3ωQQQlnQQIacIac+lnIacIac=:a46G46
L5(1d)σiEEElnEEIscIsc+lnIscIsc=:a51G51+(1l)ωQQQlnQQIscIsc+lnIscIsc=:a56G56
L6σqEEElnEEQQ+lnQQ=:a61G61
L7φaIaIaIalnIaIaHH+lnHH=:a72G72+φsIsIsIslnIsIsHH+lnHH=:a73G73+φacIacIacIaclnIacIacHH+lnHH=:a74G74+φscIscIscIsclnIscIscHH+lnHH=:a75G75

where,

a12=βηa(1em)Ia(S+T3Sc)N,a13=β(1em)Is(S+T3Sc)N,a14=βT1(1em)Iac(S+T3Sc)N,

a15=βT2(1em)Isc(S+T3Sc)N,a17=βηh(1em)H(S+T3Sc)N,a21=d1σiE,a26=l1ωQ,

a31 = d2 σi E∗, a36 = l2 ω Q∗, a41 = d3 σi E∗, a46 = l3 ω Q∗, a51 = (1 − d) σi E∗, a56 = (1 − l) ω Q∗,

a61=σqE,a72=φaIa,a73=φsIs,a74=φacIac,a75=φscIsc, and other aij = 0. With the constants aij above and A = [aij], we construct the strongly connected directed graph G(A) Fig. 5. ∑Gij = 0 along each of the cycles on the graph; for instances, G46 + G14 + G61 = 0, G61 + G26 + G72 + G17 = 0, and so on. Then by Theorem 7, there exist constants ci, i = 1, 2, ….., 7 such that L=i=17ciLi is a Lyapunov function for (2). To find the constants ci we use theorem 5 and 6. d+(7) = 1 we have c1 a17 = c7 a72 + c7 a73 + c7 a74 + c7 a75. Hence setting c1 = 1 we get c7=βηh(1em)(S+T3Sc)k7N. d(6) = 1 implies c6 a61 = c2 a26 + c3 a36 + c4 a46 + c5 a56. Hence setting c2 = c3 = c4 = c5 = 1 we get c6=4ωQσqE.

Fig. 5.

Fig. 5

Directed graph for the model (2).

Therefore with the functions Li and constants ci given above,

L=L1+L2+L3+L4+L5+4ωQσqEL6+βηh(1em)(S+T3Sc)k7NL7 is a Lyapunov function for (2). It can be verified that for this Lyapunov function, the largest invariant set for model (2) where L=0 is the singleton set E. Therefore, by LaSalle's invariance principle LaSalle (1976), E is GAS in the interior of D. □

4. Numerical simulations

In this section numerical simulations of the model (2) are carried out to explain the analytic results using the parameter values given in Table 5. Fig. 2, Fig. 3 depict the result obtained from our model vs real time data and these figure show that our model matches well with the real data. Fig. 6 and Fig. 7 show that the solution trajectory tends to the DFE (E0) and EEP (E1), respectively whenever Rc<1 and Rc>1.

Fig. 2.

Fig. 2

Fitting performance of the model for daily symptomatically infected cases in the U.S.A from February 24, 2020 to July 16, 2021.

Fig. 3.

Fig. 3

Fitting performance of the model for cumulative symptomatically infected cases in the U.S.A from February 24, 2020 to July 16, 2021.

Fig. 6.

Fig. 6

Simulations of the model (2) showing the solution trajectory tends to the DFE (E0) when Rc<1. Parameter values are used as given in Table 5.

Fig. 7.

Fig. 7

Simulations of the model (2) showing the solution trajectory tends to the EEP (E1) when Rc>1. Parameter values are used as given in Table 5.

Fig. 8 (a) - Fig. 8 (c) assess the effect of proportion of susceptible individuals who develop co-morbidity (ξ) on the daily infected cases, daily hospitalized cases and cumulative deaths with various proportions. These figures depict proportional effect of ξ with the daily infected cases, hospitalized cases and cumulative deaths.

Fig. 8.

Fig. 8

Simulations of the model (2) showing the effect of co-morbidity on COVID-19 individuals showing daily infected cases, daily hospitalized cases and cumulative deaths respectively as a function of time with various values of ξ. Fig. 8 (a) plots of total active cases, Fig. 8 (b) daily hospitalized cases and Fig. 8 (c) cumulative deaths. Parameter values are used as given in Table 5.

Fig. 9(a) - Fig. 9 (c) illustrate the effect of increased susceptibility to COVID-19 infection by co-morbid susceptible individuals than susceptible individuals without co-morbidity (T3) on the daily infected cases, daily hospitalized cases and cumulative deaths with various values of T3. These figures illustrate proportional effect of T3 with the daily infected cases, hospitalized cases and cumulative deaths.

Fig. 9.

Fig. 9

Simulations of the model (2) showing the effect of T3 on COVID-19 individuals showing daily infected cases, daily hospitalized cases and cumulative deaths respectively as a function of time with various values of T3. Fig. 9 (a) plots of daily infected cases, Fig. 9 (b) daily hospitalized cases and Fig. 9 (c) cumulative deaths. Parameter values are used as given in Table 5.

Fig. 10 assesses the impact of re-infection using various values of α and it demonstrates that number of daily infected cases increase with the increased rate of re-infection.

Fig. 10.

Fig. 10

Simulations of the model (2) showing the effect of re-infection on the number of daily infected cases for various values of α.

The impact of face mask efficacy (e) with various values of mask coverage (m) is demonstrated in Fig. 11. These figures exhibit a significant decrease in the daily infected cases (Fig. 11 (a) - Fig. 11 (c)), daily hospitalized cases (Fig. 11 (d) - Fig. 11 (f)) and cumulative deaths (Fig. 11 (g) - Fig. 11 (i)) when mask efficacy increased. From Fig. 11 it is obvious that at a fixed percentage of mask coverage, if the mask efficacy increases, the number of cases (infected, hospitalized and death) decrease.

Fig. 11.

Fig. 11

Simulations of the model (2) showing plots of daily infected cases, hospitalized cases and cumulative deaths as a function of time for various face mask efficacy. Fig. 11 (a) - Fig. 11 (c) shows results for daily infected cases for different mask efficacy. Fig. 11 (d) - Fig. 11 (f) shows results for daily hospitalized cases for different mask efficacy. Fig. 11 (g) - Fig. 11 (i) shows results for total deaths for different mask efficacy. Parameter values are used as given in Table 5.

We have also monitored the effect of contact rate on the daily infected cases, daily hospitalized cases and cumulative deaths for various values of contact rate parameter (β) in Fig. 12. These figures (considering both situations-individuals having no co-morbidity and a certain proportion of individuals having co-morbidity) show that daily infected cases (Fig. 12 (a) - Fig. 12 (c)), daily hospitalized cases (Fig. 12 (d) - Fig. 12 (f)) and cumulative deaths (Fig. 12 (g) - Fig. 12(i)) increase with increased contact rate from base line β and in all the situations, number of cases in the presence of co-morbidity are greater than the number of cases without co-morbidity. It is observed that implementing a highly-effective social-distancing strategy (reduction in contact rate β) can reduce the number of daily infected cases, daily hospitalized cases and total deaths.

Fig. 12.

Fig. 12

Simulations of the model (2) showing the effect of social distancing as a function of time for various values of β. Figure Fig. 12 (a) - Fig. 12 (c) shows daily infected cases for various β. Fig. 12 (d) - Fig. 12 (f) represents daily hospitalized cases for various β. Fig. 12 (g)- Fig. 12 (i) depicts cumulative deaths for various β. Parameter values are used as given in Table 5.

The effect of contact tracing has been shown in Fig. 13 using different values of contact tracing parameter σq. Fig. 13 (a) depicts the worst case scenario when no contact tracing is implemented and Fig. 13 (b) - Fig. 13(c) indicates if contact tracing is increased, the number of daily infected cases reduce significantly. The contour plot of the reproduction number (Rc) as a function of face mask efficacy (e) and mask coverage (m) is depicted in Fig. 14 (a). It shows that if the mask efficacy rate is 0.5 or above and the mask coverage rate is 0.5 or above then reproduction number Rc is less than one which indicates the elimination of the disease. The contour plot of Rc with contact tracing rate (σq) and increased susceptibility rate to COVID-19 infection by co-morbid susceptible individuals than susceptible individuals without co-morbidity (T3) has been presented in Fig. 14 (b). It illustrates that if the contact tracing rate is 0.2 or above and the increased susceptibility rate to COVID-19 infection by co-morbid susceptible individuals than susceptible individuals without co-morbidity is 0.3 or below then Rc is less than one which indicates the elimination of COVID-19. In summary, we see that the presence of co-morbidity among the susceptible individuals increase the disease complexity and disease induced death. However, implementation of strict social distancing has a remarkable impact on the control of COVID-19 infection. The above simulations also show that the use of efficacious face masks in public offers significant impact in reducing and mitigating the disease burden.

Fig. 13.

Fig. 13

Simulations of the model (2) showing the effect of contact tracing as a function of time for various values of σq. Fig. 13 (a) - Fig. 13 (c) shows daily infected cases for various σq. Fig. 13 (d) - Fig. 13 (f) represents daily hospitalized cases for various σq. Fig. 13 (g) - Fig. 13 (i) depicts cumulative deaths for various σq. Parameter values are used as given in Table 5.

Fig. 14.

Fig. 14

Effect of face-masks use in public. Contour plot of the basic reproduction number (Rc), as a function of face-mask efficacy (e) and mask coverage (m). Parameter values are used as given in Table 5 with various values of e and m. Combined effect of σq and T3. Contour plot of the reproduction number (Rc), as a function of σq and T3. Parameter values are used as given in Table 5 with various values of σq and T3.

5. Global uncertainty and sensitivity analysis

Sensitivity analysis (SA) is a tool for studying the uncertainty in any type of complex mathematical model or system. The objective of SA is to study how the uncertainty of inputs (parameters) affects the uncertainty of target variable (output measure) Sanchez and Blower (1997) and thus to identify those parameters whose uncertainty impacts model outcomes. In this paper we will discuss the PRCC method to analyze the uncertainty and sensitivity of parameter values for different response function. Parameters having large PRCC values (PRCC>0.5) and small p-values (p < 0.01) are considered the most important Taylor (1990). For PRCC analysis, 30 uncertain or Latin Hyperbolic Sapling (LHS) parameters are considered. To analyze the significance of these parameters in the model predictions, we begin by performing LHS analysis. In our analysis, 509 model simulations are performed and the model is run for 509 days per run. Maximum, minimum and baseline values (base line value has been set to a value at or near the middle of the range between the minimum and maximum values for that parameter) for each of the 30 LHS parameters are given in Table 6. For each LHS parameter, each of the 509 input values are obtained by the sampling of a uniform probability density distribution.

Table 6.

Baseline, maximum and minimum values used in LHS analysis.

parameter Min Baseline Max parameter Min Baseline Max
e 0.6 0.5 0.7 ψs 0.1 0.12 0.14
m 0.05 0.1 0.15 ψac 0.1 0.11 0.12
β 0.39 0.395 0.43 ψsc 0.09 0.1 0.11
α 0.000098 0.0001 0.0009 ψq 0.18 0.2 0.22
T1 1.1 1.15 1.2 ψh 0.07 0.09 0.11
T2 1.2 1.25 1.3 δa 0.009 0.0095 0.02
T3 1.45 1.5 1.55 δs 0.018 0.02 0.025
ξ 0.001 0.003 0.005 δac 0.023 0.025 0.03
σi 0.18 0.2 0.22 δsc 0.028 0.03 0.035
σq 0.13 0.15 0.17 δq 0.009 0.0095 0.02
φa 0.09 0.1 0.11 δh 0.013 0.015 0.02
φs 0.13 0.15 0.17 μ 0.00003 0.00004 0.0009
φac 0.18 0.2 0.22 Ω 0.18 0.2 0.22
φsc 0.22 0.25 0.28 ηa 0.6 0.65 0.7
ψa 0.12 0.14 0.16 ηh 0.65 0.7 0.75

Considering the basic reproduction number Rc as the response function we observe from Fig. 15 that parameters that mostly influence the dynamics of the model (2) are m,β,T3,σi,σq,ψa,ψs,ψh,ηh. Again from Fig. 16, we observe that parameters e,m,β,T3,σi,σq,ψa,ψs,ψh,ω,andηh are the important contributors to uncertainty for the response function Is. Considering the number of asymptomatic infected individuals having co-morbidity (Iac) as the response function we observe from Fig. 17 that the mostly influential parameters affecting the dynamics of the model (2) are e,m,β,T3,σi,σq,ψs,ψh,ω,ηh. Using the number of symptomatic infected individuals having co-morbidity (Isc) as the response function we observe from Fig. 18 that the top ranked parameters that influence the dynamics of the model (2) are e,m,β,T3,σi,σq,φs,ψa,ψs,ψh,ω,ηh. Considering the number of quarantined individuals (Q) as the response function we observe from Fig. 19 that the top ranked parameters that influence the dynamics of the model (2) are e,m,β,T3,σi,σq,ψa,ψs,ψh,ω,ηh.

Fig. 15.

Fig. 15

Sensitivity Analysis of Rc as a response function with respect to model parameters.

Fig. 16.

Fig. 16

Sensitivity Analysis of Symptomatic Infected Individuals having no Co-morbidity (Is) as a response function with respect to model parameters.

Fig. 17.

Fig. 17

Sensitivity Analysis of Asymptomatic Infected Individuals having Co-morbidity (Iac) as a response function with respect to model parameters.

Fig. 18.

Fig. 18

Sensitivity Analysis of Symptomatic Infected Individuals having Co-morbidity (Isc) as a response function with respect to model parameters.

Fig. 19.

Fig. 19

Sensitivity Analysis of Quarantined Individuals (Q) as a response function with respect to model parameters.

6. Conclusions

In this study we have developed, analyzed and simulated a new mathematical model to understand the transmission dynamics of COVID-19 and to assess the impact of NPIs. The parameters used in this study to design and simulate the model are relevant to COVID-19 data collected from the entire USA population.

The main theoretical results of the model are:

  • The solution trajectory tends to DFE when Rc<1 and the solution trajectory tends to EEP when Rc>1.

  • The model exhibits the phenomenon of backward bifurcation, when Rc<1. It was caused by the parameter accounting for re-infection of the individuals who have already recovered from a COVID-19 infection.

  • The model with α = 0 has a globally asymptotically stable DFE whenever Rc<1 and a unique globally asymptotically stable EEP when Rc>1.

Numerical simulations were carried out meticulously using the parameterized model to assess the impact of co-morbidity on COVID-19 complications and also to assess the impact of re-infection on the spread of the disease.Numerical results of the model suggest that:

  • COVID-19 can be eliminated significantly if strict social distancing is maintained with the use of highly effective face mask.

  • Presence of any co-morbidity among the susceptible individuals increase the disease burden.

  • The number of infected cases increase quickly if the re-infection rate increase.

Global uncertainty and sensitivity analysis was carried out to identify the most significant parameters that influence the transmission dynamics of COVID-19.

Uncertainty and sensitivity analysis suggest that:

  • Intervention programs aiming for reduction in contact rate, increasing the number of quarantined individuals with the use of effective NPIs will have higher impact on controlling the COVID-19 spread.

  • e,m,β,T3,σq are the most important parameters that control the dynamics of the COVID-19.

In summary, our study suggests that using NPIs, particularly maintaining social distance and using effective face mask publicly, the disease can be controlled. It also suggests that co-morbidity and re-infection are key factor to increase the disease burden. Although Rc<1 is necessary to curtail the COVID-19 burden but backward bifurcation feature indicates Rc<1 is not sufficient for disease elimination. It is important to mention that If there is no re-infection, backward bifurcation will not occur which will help curtail the COVID-19 outbreak.

Declaration of competing interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Handling Editor: Dr HE DAIHAI HE

Footnotes

Peer review under responsibility of KeAi Communications Co., Ltd.

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